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ONTOLOGY REPORT - ANNOTATIONS


Term:extrinsic component of endoplasmic reticulum membrane
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Accession:GO:0042406 term browser browse the term
Definition:The component of the endoplasmic reticulum membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
Synonyms:exact_synonym: extrinsic to ER membrane
 narrow_synonym: extrinsic to endoplasmic reticulum membrane


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extrinsic component of endoplasmic reticulum membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 IDA RGD PMID:1717467 RGD:61536 NCBI chr10:47,525,486...47,546,535
Ensembl chr10:47,525,493...47,546,345
JBrowse link
G Ccdc115 coiled-coil domain containing 115 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:37,774,876...37,778,839
Ensembl chr 9:37,775,311...37,779,967
JBrowse link
G Gba2 glucosylceramidase beta 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:5484792|PMID:23250757)
UniProt
RGD
PMID:23250757 GO_REF:0000024, MGI:MGI:5484792 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Mmp27 matrix metallopeptidase 27 ISO (PMID:24548619) RGD PMID:24548619 NCBI chr 8:5,790,019...5,799,938
Ensembl chr 8:5,790,034...5,800,342
JBrowse link
G Otulinl OTU deubiquitinase with linear linkage specificity like ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:31056421)
UniProt
Ensembl
RGD
PMID:31056421 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:80,383,642...80,408,672
Ensembl chr 2:80,383,643...80,408,672
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:4849347|PMID:21030605) RGD PMID:21030605 MGI:MGI:4849347 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Tor1a torsin family 1, member A ISO
ISS
(PMID:17037984)
GO_REF:0000024
RGD
UniProt
PMID:17037984 GO_REF:0000024 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISS
ISO
GO_REF:0000024
(MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671)
UniProt
RGD
PMID:26000482, PMID:26255671 GO_REF:0000024, MGI:MGI:5706859, MGI:MGI:5751631 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      extrinsic component of membrane 337
        extrinsic component of organelle membrane 66
          extrinsic component of endoplasmic reticulum membrane 8
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      intracellular anatomical structure 14705
        intracellular organelle 12917
          intracellular membrane-bounded organelle 10505
            endoplasmic reticulum 1754
              endoplasmic reticulum subcompartment 951
                endoplasmic reticulum membrane 940
                  extrinsic component of endoplasmic reticulum membrane 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.