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ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin metabolic process
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Accession:GO:0042428 term browser browse the term
Definition:The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.
Synonyms:exact_synonym: serotonin metabolism


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serotonin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Btbd9 BTB domain containing 9 JBrowse link 20 8,899,286 9,253,936 RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:1624291
RGD:1600115
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:1600709
RGD:1600713
G Pde1b phosphodiesterase 1B JBrowse link 7 145,117,951 145,147,711 RGD:1624291
G Rnf180 ring finger protein 180 JBrowse link 2 35,718,100 35,892,578 RGD:1624291
RGD:1600115
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:1624291
G Srd5a1 steroid 5 alpha-reductase 1 JBrowse link 1 36,320,504 36,354,694 RGD:4891926
serotonin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5129182
RGD:13792537
G Tph2 tryptophan hydroxylase 2 JBrowse link 7 58,042,279 58,149,220 RGD:1600115
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11353778
G Tph1 tryptophan hydroxylase 1 JBrowse link 1 102,669,868 102,699,442 RGD:625621

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      nitrogen compound metabolic process 10025
        ammonium ion metabolic process 26
          serotonin metabolic process 14
            serotonin biosynthetic process + 4
            serotonin catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      cellular metabolic process 10737
        cellular aromatic compound metabolic process 5503
          phenol-containing compound metabolic process 122
            serotonin metabolic process 14
              serotonin biosynthetic process + 4
              serotonin catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.