Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor cell development
go back to main search page
Accession:GO:0042461 term browser browse the term
Definition:Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light.
Synonyms:exact_synonym: photoreceptor morphogenesis
 alt_id: GO:0046531


show annotations for term's descendants       view all columns           Sort by:
 
photoreceptor cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:1600115
RGD:1624291
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:13792537
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
RGD:13792537
G Rp1l1 RP1 like 1 JBrowse link 15 47,344,380 47,384,461 RGD:1624291
RGD:13792537
G Tug1 taurine up-regulated 1 JBrowse link 14 83,878,757 83,885,791 RGD:1624291
eye photoreceptor cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1624291
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:1624291
G Fscn2 fascin actin-bundling protein 2, retinal JBrowse link 10 109,528,307 109,540,675 RGD:1624291
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 JBrowse link 5 48,303,366 48,341,571 RGD:1624291
G Gnat1 G protein subunit alpha transducin 1 JBrowse link 8 116,433,302 116,438,038 RGD:1624291
G Gngt1 G protein subunit gamma transducin 1 JBrowse link 4 28,972,339 28,975,419 RGD:1624291
G Mfrp membrane frizzled-related protein JBrowse link 8 48,437,720 48,443,421 RGD:1624291
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:1624291
G Olfm3 olfactomedin 3 JBrowse link 2 217,779,983 218,005,710 RGD:633402
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:1624291
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:1624291
G Prkci protein kinase C, iota JBrowse link 2 115,941,998 116,002,550 RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:724403
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:633871
G Rdh13 retinol dehydrogenase 13 JBrowse link 1 72,956,017 72,983,811 RGD:1624291
G Rorb RAR-related orphan receptor B JBrowse link 1 234,252,757 234,442,597 RGD:1624291
RGD:1600115
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:1624291
G Rpgrip1 RPGR interacting protein 1 JBrowse link 15 28,521,287 28,575,046 RGD:1624291
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1624291
G Tulp1 TUB like protein 1 JBrowse link 20 7,931,673 7,943,601 RGD:1624291
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
negative regulation of eye photoreceptor cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:1624291
G Thrb thyroid hormone receptor beta JBrowse link 15 8,890,578 9,239,815 RGD:1600115
RGD:1624291
photoreceptor cell morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:1624291
G Cabp4 calcium binding protein 4 JBrowse link 1 219,383,452 219,388,009 RGD:1624291
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:1624291
G Grk1 G protein-coupled receptor kinase 1 JBrowse link 16 81,153,489 81,165,442 RGD:1624291
G MGC94199 similar to RIKEN cDNA 2610301B20; EST AI428449 JBrowse link 5
5
24,145,829
23,358,464
24,165,467
23,377,697
RGD:1600115
RGD:1624291
G Rabl2 RAB, member of RAS oncogene family like 2 JBrowse link 7 130,556,056 130,564,764 RGD:1624291
photoreceptor cell outer segment organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1600115
RGD:1624291
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:1624291
G Cngb1 cyclic nucleotide gated channel subunit beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:1624291
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
G Nphp1 nephrocystin 1 JBrowse link 3 120,316,048 120,370,089 RGD:1624291
G Nphp4 nephrocystin 4 JBrowse link 5 169,647,581 169,744,662 RGD:1624291
G Pcare photoreceptor cilium actin regulator JBrowse link 6 23,337,507 23,346,232 RGD:1624291
RGD:13792537
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:11535084
positive regulation of rhodopsin gene expression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:1624291
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1624291
regulation of rhodopsin gene expression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1624291
RGD:13792537
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:1624291
retinal cone cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1624291
G Cabp4 calcium binding protein 4 JBrowse link 1 219,383,452 219,388,009 RGD:1624291
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:1624291
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:1624291
G Gnat2 G protein subunit alpha transducin 2 JBrowse link 2 210,880,754 210,890,765 RGD:1624291
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 JBrowse link 2 50,099,576 50,499,799 RGD:1624291
RGD:1600115
G Mir124-1 microRNA 124-1 JBrowse link 15 47,964,298 47,964,382 RGD:1624291
G Mir124-2 microRNA 124-2 JBrowse link 2 102,311,603 102,311,711 RGD:1624291
G Mir183 microRNA 183 JBrowse link 4 57,463,569 57,463,678 RGD:1624291
G Mir96 microRNA 96 JBrowse link 4 57,463,366 57,463,471 RGD:1624291
G Pde6c phosphodiesterase 6C JBrowse link 1 256,822,099 256,885,879 RGD:1624291
G Rorb RAR-related orphan receptor B JBrowse link 1 234,252,757 234,442,597 RGD:1600115
RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
G Thrb thyroid hormone receptor beta JBrowse link 15 8,890,578 9,239,815 RGD:1600115
RGD:1624291
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:1624291
RGD:13792537
RGD:1600115
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:13792537
retinal rod cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1624291
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:1624291
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Bhlhe23 basic helix-loop-helix family, member e23 JBrowse link 3 176,279,997 176,282,211 RGD:1624291
G Ccdc66 coiled-coil domain containing 66 JBrowse link 16 3,107,119 3,139,188 RGD:1624291
G Miat myocardial infarction associated transcript JBrowse link 12 50,447,251 50,461,859 RGD:1624291
G Naglu N-acetyl-alpha-glucosaminidase JBrowse link 10 88,979,363 88,986,879 RGD:1624291
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1624291
RGD:13792537
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1624291
RGD:1600115
G Rorb RAR-related orphan receptor B JBrowse link 1 234,252,757 234,442,597 RGD:1600115
RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 JBrowse link 1 124,983,391 125,101,759 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    developmental process 6638
      anatomical structure development 6107
        cell development 2462
          neuron development 1284
            photoreceptor cell development 62
              eye photoreceptor cell development + 45
              ocellus photoreceptor cell development 0
              photoreceptor cell morphogenesis + 6
              photoreceptor cell outer segment organization 11
              regulation of rhodopsin gene expression + 3
Path 2
Term Annotations click to browse term
  biological_process 19334
    developmental process 6638
      anatomical structure development 6107
        multicellular organism development 5579
          system development 5100
            nervous system development 2602
              neurogenesis 1884
                generation of neurons 1749
                  neuron differentiation 1575
                    neuron development 1284
                      photoreceptor cell development 62
                        eye photoreceptor cell development + 45
                        ocellus photoreceptor cell development 0
                        photoreceptor cell morphogenesis + 6
                        photoreceptor cell outer segment organization 11
                        regulation of rhodopsin gene expression + 3
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.