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ONTOLOGY REPORT - ANNOTATIONS


Term:ear morphogenesis
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Accession:GO:0042471 term browser browse the term
Definition:The process in which the anatomical structures of the ear are generated and organized. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.
Synonyms:exact_synonym: hearing organ morphogenesis


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ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:MGI:1862038 (MGI:MGI:1861752|PMID:10932191) RGD PMID:10932191 MGI:MGI:1861752 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Gjb6 gap junction protein, beta 6 ISO MGI:MGI:2447863 (MGI:MGI:2447513|PMID:12490528) RGD PMID:12490528 MGI:MGI:2447513 NCBI chr15:37,400,888...37,411,656
Ensembl chr15:37,400,889...37,410,848
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
MGI:MGI:2179191 (MGI:MGI:3050165|PMID:15190012)
GO_REF:0000024
RGD
UniProt
PMID:15190012 GO_REF:0000024, MGI:MGI:3050165 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:MGI:5315747 (MGI:MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 ISO MGI:MGI:4354110 (MGI:MGI:4353582|PMID:19363478) RGD PMID:19363478 MGI:MGI:4353582 NCBI chr 4:57,463,366...57,463,471
Ensembl chr 4:57,463,366...57,463,471
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:MGI:2663662|MGI:MGI:2663669 (MGI:MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:MGI:2139764 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:2145950|MGI:MGI:4440621 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:MGI:4417931 (MGI:MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO
IEA
MGI:MGI:5558098 (MGI:MGI:5544506|PMID:24302887)
GO_REF:0000107
RGD
Ensembl
PMID:24302887 GO_REF:0000107, MGI:MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:MGI:1856799 (MGI:MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:MGI:3709803 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:MGI:1856228|MGI:MGI:1856681|MGI:MGI:1891428|MGI:MGI:2154548|MGI:MGI:2154549 (MGI:MGI:1929001|PMID:11138008), (MGI:MGI:1933915|PMID:11322776), (MGI:MGI:3526751|PMID:15537665), (MGI:MGI:3625226|PMID:12121736), (MGI:MGI:3686545|PMID:17050716), (MGI:MGI:5468200|PMID:23217710), (MGI:MGI:75953|PMID:7610888), (MGI:MGI:81497|PMID:8790740), (MGI:MGI:86134|PMID:9039475) RGD PMID:7610888, PMID:8790740, PMID:9039475, PMID:11138008, PMID:11322776, PMID:12121736, PMID:15537665, PMID:17050716, PMID:23217710 MGI:MGI:1929001, MGI:MGI:1933915, MGI:MGI:3526751, MGI:MGI:3625226, MGI:MGI:3686545, MGI:MGI:5468200, MGI:MGI:75953, MGI:MGI:81497, MGI:MGI:86134 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Clic5 chloride intracellular channel 5 ISO
IBA
MGI:MGI:3663254 (MGI:MGI:3663248|PMID:17021174)
PMID:21873635
RGD PMID:17021174, PMID:21873635 MGI:MGI:3663248, RGD:13792537 NCBI chr 9:19,121,676...19,372,673
Ensembl chr 9:19,121,677...19,372,673
JBrowse link
G Clrn1 clarin 1 IEA
ISO
GO_REF:0000107
MGI:MGI:3850171 (MGI:MGI:3849925|PMID:19414487), (MGI:MGI:4353469|PMID:19423712)
Ensembl
RGD
PMID:19414487, PMID:19423712 GO_REF:0000107, MGI:MGI:3849925, MGI:MGI:4353469 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO MGI:MGI:2139535|MGI:MGI:6281113|MGI:MGI:6281114 (MGI:MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:MGI:6278501 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO MGI:MGI:3055797|MGI:MGI:3718054 (MGI:MGI:3578102|PMID:15905332), (MGI:MGI:3759710|PMID:17876667), (MGI:MGI:5468200|PMID:23217710) RGD PMID:15905332, PMID:17876667, PMID:23217710 MGI:MGI:3578102, MGI:MGI:3759710, MGI:MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Myo3a myosin IIIA ISO MGI:MGI:2448580 (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO MGI:MGI:2183924 (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:1860092|MGI:MGI:2155422 (MGI:MGI:2156358|PMID:11753415), (MGI:MGI:3625226|PMID:12121736), (MGI:MGI:3686545|PMID:17050716) RGD PMID:11753415, PMID:12121736, PMID:17050716 MGI:MGI:2156358, MGI:MGI:3625226, MGI:MGI:3686545 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:MGI:1855958|MGI:MGI:1856394|MGI:MGI:1856396|MGI:MGI:1890219|MGI:MGI:2151877|MGI:MGI:3505691 (MGI:MGI:1928787|PMID:10978835), (MGI:MGI:3526751|PMID:15537665), (MGI:MGI:3619110|PMID:11124469), (MGI:MGI:3654702|PMID:16887306), (MGI:MGI:5468200|PMID:23217710) RGD PMID:10978835, PMID:11124469, PMID:15537665, PMID:16887306, PMID:23217710 MGI:MGI:1928787, MGI:MGI:3526751, MGI:MGI:3619110, MGI:MGI:3654702, MGI:MGI:5468200 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO
IBA
MGI:MGI:4433578 (MGI:MGI:5565635|PMID:24334608)
PMID:21873635
RGD PMID:24334608, PMID:21873635 MGI:MGI:5565635, RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107, MGI:MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024, MGI:MGI:6193260 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:MGI:5789047 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:MGI:2139764 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:2145950|MGI:MGI:4440621 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO MGI:MGI:3526430 (MGI:MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Sod1 superoxide dismutase 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1857872 (MGI:MGI:1344578|PMID:10466888), (MGI:MGI:3700629|PMID:10464373)
UniProt
RGD
PMID:10464373, PMID:10466888 GO_REF:0000024, MGI:MGI:1344578, MGI:MGI:3700629 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Strc stereocilin ISO MGI:MGI:3818633 (MGI:MGI:3818235|PMID:18849963), (MGI:MGI:5430850|PMID:21165971) RGD PMID:18849963, PMID:21165971 MGI:MGI:3818235, MGI:MGI:5430850 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tprn taperin ISO MGI:MGI:2685697 (MGI:MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:MGI:6278501 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710
JBrowse link
G Triobp TRIO and F-actin binding protein ISO MGI:MGI:4881773 (MGI:MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:MGI:4881391 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
G Whrn whirlin ISO
IBA
IEA
MGI:MGI:4432119 (MGI:MGI:5796227|PMID:27117407)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:27117407, PMID:21873635 GO_REF:0000107, MGI:MGI:5796227, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:MGI:1915838 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:MGI:106613 (MGI:MGI:3589836|PMID:16116426) RGD PMID:16116426 MGI:MGI:3589836 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO MGI:MGI:108100|MGI:MGI:94941 (MGI:MGI:3589836|PMID:16116426), (MGI:MGI:3821448|PMID:19008950) RGD PMID:16116426, PMID:19008950 MGI:MGI:3589836, MGI:MGI:3821448 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 ISO MGI:MGI:106613|MGI:MGI:2135272 (MGI:MGI:3821448|PMID:19008950) RGD PMID:19008950 MGI:MGI:3821448 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:1857803 (MGI:MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:MGI:1335261 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Frzb frizzled-related protein ISO MGI:MGI:98958 (MGI:MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:MGI:3714704 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
JBrowse link
G Fzd2 frizzled class receptor 2 ISO
IEA
MGI:MGI:2135272 (MGI:MGI:4837757|PMID:20940229)
GO_REF:0000107
RGD
Ensembl
PMID:20940229 GO_REF:0000107, MGI:MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509 (MGI:MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:MGI:3709667 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:MGI:2135272 (MGI:MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:MGI:4819429 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hpn hepsin ISO
ISS
(MGI:MGI:5306554|PMID:20683358)
GO_REF:0000024
RGD
UniProt
PMID:20683358 GO_REF:0000024, MGI:MGI:5306554 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Myo3a myosin IIIA ISO (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
MGI:MGI:1857673|UniProtKB:Q00288 (MGI:MGI:3702803|PMID:16916509), (MGI:MGI:4822275|PMID:20727173), (MGI:MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055, PMID:16916509, PMID:20727173 GO_REF:0000024, MGI:MGI:3702803, MGI:MGI:4822275, MGI:MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pou3f4 POU class 3 homeobox 4 ISO
ISS
UniProtKB:P70323 (MGI:MGI:5284768|PMID:18231833)
GO_REF:0000024
RGD
UniProt
PMID:18231833 GO_REF:0000024, MGI:MGI:5284768 NCBI chr  X:82,143,789...82,145,066
Ensembl chr  X:82,143,789...82,145,066
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:MGI:3640803 (MGI:MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:MGI:2663662|MGI:MGI:2663669 (MGI:MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:2655195 (MGI:MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:MGI:2671031 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:2385468|MGI:MGI:3841145 (MGI:MGI:4454502|PMID:20346939)
GO_REF:0000024
RGD
UniProt
PMID:20346939 GO_REF:0000024, MGI:MGI:4454502 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:MGI:2179136|UniProtKB:P62515 (MGI:MGI:3765363|PMID:17825816), (MGI:MGI:5284768|PMID:18231833)
UniProt
RGD
PMID:17825816, PMID:18231833 GO_REF:0000024, MGI:MGI:3765363, MGI:MGI:5284768 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx18 T-box transcription factor 18 ISO MGI:MGI:3044915 (MGI:MGI:3788971|PMID:18353863) RGD PMID:18353863 MGI:MGI:3788971 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Tshr thyroid stimulating hormone receptor IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:115,170,290...115,306,871
Ensembl chr 6:115,170,865...115,306,871
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 ISO (MGI:MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:MGI:3652455 NCBI chr 4:93,447,412...93,448,194 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:108100|MGI:MGI:1857642|MGI:MGI:1888513|MGI:MGI:2655333|MGI:MGI:98958 (MGI:MGI:3589836|PMID:16116426), (MGI:MGI:3714704|PMID:17433286), (MGI:MGI:3814781|PMID:18606138), (MGI:MGI:3821448|PMID:19008950), (MGI:MGI:4819429|PMID:20643356), (MGI:MGI:4837757|PMID:20940229) RGD PMID:16116426, PMID:17433286, PMID:18606138, PMID:19008950, PMID:20643356, PMID:20940229 MGI:MGI:3589836, MGI:MGI:3714704, MGI:MGI:3814781, MGI:MGI:3821448, MGI:MGI:4819429, MGI:MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617|MGI:MGI:2135272 (MGI:MGI:3714704|PMID:17433286)
GO_REF:0000107
RGD
Ensembl
PMID:17433286 GO_REF:0000107, MGI:MGI:3714704 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO
IEA
MGI:MGI:1861230 (MGI:MGI:5294688|PMID:21980308)
GO_REF:0000107
RGD
Ensembl
PMID:21980308 GO_REF:0000107, MGI:MGI:5294688 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase ISO
IEA
MGI:MGI:88141 (MGI:MGI:3622851|PMID:11921339)
GO_REF:0000107
RGD
Ensembl
PMID:11921339 GO_REF:0000107, MGI:MGI:3622851 NCBI chr10:64,565,121...64,657,079
Ensembl chr10:64,567,268...64,657,089
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 ISO
IEA
MGI:MGI:3043947 (MGI:MGI:5488831|PMID:23536097)
GO_REF:0000107
RGD
Ensembl
PMID:23536097 GO_REF:0000107, MGI:MGI:5488831 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:MGI:2155983|MGI:MGI:2155984 (MGI:MGI:3525036|PMID:15543141), (MGI:MGI:3607238|PMID:16145671) RGD PMID:15543141, PMID:16145671 MGI:MGI:3525036, MGI:MGI:3607238 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:MGI:1857876 (MGI:MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:MGI:1275896 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 NOT ISO
ISS
(PMID:19639346)
GO_REF:0000024
(MGI:MGI:2669353|PMID:12782355)
RGD
UniProt
PMID:12782355, PMID:19639346 GO_REF:0000024, MGI:MGI:2669353 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO MGI:MGI:107771 (MGI:MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:MGI:3622851 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:MGI:1856229|MGI:MGI:1856681|MGI:MGI:2665714 (MGI:MGI:3579755|PMID:15925194), (MGI:MGI:75953|PMID:7610888) RGD PMID:7610888, PMID:15925194 MGI:MGI:3579755, MGI:MGI:61210, MGI:MGI:75953 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:1862019|MGI:MGI:2668337 (MGI:MGI:2667273|PMID:12842012) RGD PMID:12842012 MGI:MGI:2667273 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (PMID:15300250)
MGI:MGI:3511552 (MGI:MGI:3056111|PMID:15353999)
RGD PMID:15300250, PMID:15353999 MGI:MGI:3056111 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO MGI:MGI:3774038 (MGI:MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:MGI:3771935 NCBI chr 1:167,206,722...167,212,199
Ensembl chr 1:167,206,722...167,210,919
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO MGI:MGI:2158742 (MGI:MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:MGI:3771935 NCBI chr14:43,883,450...43,890,171
Ensembl chr14:43,883,458...43,890,171
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO MGI:MGI:1856399 (MGI:MGI:49531|PMID:1952599) RGD PMID:1952599 MGI:MGI:49531 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO
IEA
MGI:MGI:1857275 (MGI:MGI:892501|PMID:9165353)
GO_REF:0000107
RGD
Ensembl
PMID:9165353 GO_REF:0000107, MGI:MGI:892501 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISO
GO_REF:0000107
MGI:MGI:101927|MGI:MGI:2180474 (MGI:MGI:2384365|PMID:12142028), (MGI:MGI:3689133|PMID:16900517)
Ensembl
RGD
PMID:12142028, PMID:16900517 GO_REF:0000107, MGI:MGI:2384365, MGI:MGI:3689133 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dlx6 distal-less homeobox 6 ISO MGI:MGI:101926 (MGI:MGI:3689133|PMID:16900517) RGD PMID:16900517 MGI:MGI:3689133 NCBI chr 4:32,373,096...32,377,388
Ensembl chr 4:32,373,641...32,377,253
JBrowse link
G Efna2 ephrin A2 TAS RGD PMID:10792438 RGD:1300471 NCBI chr 7:12,382,636...12,393,266
Ensembl chr 7:12,382,636...12,393,266
JBrowse link
G Ephb2 Eph receptor B2 ISO (MGI:MGI:1859095|PMID:10839360) RGD PMID:10839360 MGI:MGI:1859095 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:1857803|MGI:MGI:2150426|MGI:MGI:97486 (MGI:MGI:1344210|PMID:10471511), (MGI:MGI:3577160|PMID:15817220), (MGI:MGI:3702803|PMID:16916509) RGD PMID:10471511, PMID:15817220, PMID:16916509 MGI:MGI:1344210, MGI:MGI:3577160, MGI:MGI:3702803 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1347464|MGI:MGI:1859647 (MGI:MGI:3654570|PMID:16691564), (MGI:MGI:3688470|PMID:11062007) RGD PMID:11062007, PMID:16691564 MGI:MGI:3654570, MGI:MGI:3688470 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:1345138 (MGI:MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:MGI:3577817 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO MGI:MGI:2135961 (MGI:MGI:3056034|PMID:15328018) RGD PMID:15328018 MGI:MGI:3056034 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
MGI:MGI:2153351 (MGI:MGI:2386422|PMID:12194867)
GO_REF:0000107
RGD
Ensembl
PMID:12194867 GO_REF:0000107, MGI:MGI:2386422 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153811 (MGI:MGI:2153190|PMID:10934262) RGD PMID:10934262 MGI:MGI:2153190 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxg1 forkhead box G1 ISO MGI:MGI:1099809|MGI:MGI:2388671 (MGI:MGI:3654570|PMID:16691564) RGD PMID:16691564 MGI:MGI:3654570 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Foxi1 forkhead box I1 ISO MGI:MGI:2448634 (MGI:MGI:2652196|PMID:12642503) RGD PMID:12642503 MGI:MGI:2652196 NCBI chr10:19,160,566...19,164,505
Ensembl chr10:19,160,582...19,164,505
JBrowse link
G Frzb frizzled-related protein ISO MGI:MGI:98958 (MGI:MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:MGI:3823145 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
JBrowse link
G Fzd3 frizzled class receptor 3 ISO MGI:MGI:108474 (MGI:MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:MGI:3616416 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Fzd6 frizzled class receptor 6 ISO MGI:MGI:108476 (MGI:MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:MGI:3616416 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:MGI:4818492 (MGI:MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:MGI:4821520 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:MGI:2153826|MGI:MGI:2181200 (MGI:MGI:1928163|PMID:11135239), (MGI:MGI:5013488|PMID:21553382) RGD PMID:11135239, PMID:21553382 MGI:MGI:1928163, MGI:MGI:5013488 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:MGI:1857634 (MGI:MGI:3578572|PMID:15829521), (MGI:MGI:3588904|PMID:15996652) RGD PMID:15829521, PMID:15996652 MGI:MGI:3578572, MGI:MGI:3588904 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:MGI:2449921 (MGI:MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:MGI:2429425 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Hmx2 H6 family homeobox 2 ISO MGI:MGI:107160|MGI:MGI:2154542 (MGI:MGI:2154463|PMID:11748138), (MGI:MGI:3055237|PMID:15363417) RGD PMID:11748138, PMID:15363417 MGI:MGI:2154463, MGI:MGI:3055237 NCBI chr 1:203,515,605...203,523,266
Ensembl chr 1:203,515,609...203,523,358
JBrowse link
G Hmx3 H6 family homeobox 3 ISO MGI:MGI:107159|MGI:MGI:1857577 (MGI:MGI:1197796|PMID:9435283), (MGI:MGI:3055237|PMID:15363417) RGD PMID:9435283, PMID:15363417 MGI:MGI:1197796, MGI:MGI:3055237 NCBI chr 1:203,509,731...203,511,695
Ensembl chr 1:203,509,731...203,511,695
JBrowse link
G Hoxa1 homeobox A1 ISO MGI:MGI:3056069 (MGI:MGI:3055618|PMID:15367676) RGD PMID:15367676 MGI:MGI:3055618 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Insig1 insulin induced gene 1 ISO MGI:MGI:1920249 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 ISO MGI:MGI:1916289 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Itga8 integrin subunit alpha 8 ISO MGI:MGI:2181699 (MGI:MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:MGI:1355040 NCBI chr17:79,321,893...79,676,927
Ensembl chr17:79,321,900...79,676,499
JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 ISO
IEA
MGI:MGI:3618993 (MGI:MGI:3617033|PMID:16437162)
GO_REF:0000107
RGD
Ensembl
PMID:16437162 GO_REF:0000107, MGI:MGI:3617033 NCBI chr 5:139,625,783...139,677,300
Ensembl chr 5:139,627,576...139,677,300
JBrowse link
G Mafb MAF bZIP transcription factor B ISO MGI:MGI:1856419 (MGI:MGI:3611672|PMID:16325169) RGD PMID:16325169 MGI:MGI:3611672 NCBI chr 3:156,338,993...156,340,913
Ensembl chr 3:156,339,004...156,340,913
JBrowse link
G Myo15a myosin XVA ISO MGI:MGI:1857036 (MGI:MGI:3041655|PMID:14724386), (MGI:MGI:3054106|PMID:11718241) RGD PMID:11718241, PMID:14724386 MGI:MGI:3041655, MGI:MGI:3054106 NCBI chr10:46,840,098...46,897,362
Ensembl chr10:46,840,113...46,896,054
JBrowse link
G Myo6 myosin VI ISO
IBA
MGI:MGI:1856555 (MGI:MGI:77423|PMID:7493015)
PMID:21873635
RGD PMID:7493015, PMID:21873635 MGI:MGI:77423, RGD:13792537 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:1856716|MGI:MGI:1860092|MGI:MGI:2155422|MGI:MGI:3511858 (MGI:MGI:2156358|PMID:11753415), (MGI:MGI:3510503|PMID:15389316), (MGI:MGI:53596|PMID:5795329) RGD PMID:5795329, PMID:11753415, PMID:15389316 MGI:MGI:2156358, MGI:MGI:3510503, MGI:MGI:53596 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Neurog1 neurogenin 1 ISO MGI:MGI:2183171 (MGI:MGI:3607238|PMID:16145671)
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)
RGD PMID:16145671, PMID:23419067 MGI:MGI:3607238 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO MGI:MGI:3037444 (MGI:MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:MGI:2157256 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Ntn1 netrin 1 ISO
IEA
MGI:MGI:2137018 (MGI:MGI:3718276|PMID:17616930)
GO_REF:0000107
RGD
Ensembl
PMID:17616930 GO_REF:0000107, MGI:MGI:3718276 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Otop1 otopetrin 1 ISO MGI:MGI:1856638|MGI:MGI:2655558 (MGI:MGI:2654297|PMID:12651873) RGD PMID:12651873 MGI:MGI:2654297 NCBI chr14:77,236,278...77,263,729
Ensembl chr14:77,236,278...77,263,729
JBrowse link
G Otx1 orthodenticle homeobox 1 ISO
IEA
MGI:MGI:2136272|MGI:MGI:97451 (MGI:MGI:1335816|PMID:10225993)
GO_REF:0000107
RGD
Ensembl
PMID:10225993 GO_REF:0000107, MGI:MGI:1335816 NCBI chr14:106,861,556...106,864,933
Ensembl chr14:106,861,676...106,864,892
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:97450 (MGI:MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:MGI:1335816 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
MGI:MGI:109344|MGI:MGI:1857673|UniProtKB:Q00288 (MGI:MGI:3052393|PMID:15242798), (MGI:MGI:3702803|PMID:16916509), (MGI:MGI:4822275|PMID:20727173), (MGI:MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055, PMID:15242798, PMID:16916509, PMID:20727173 GO_REF:0000024, MGI:MGI:3052393, MGI:MGI:3702803, MGI:MGI:4822275, MGI:MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO UniProtKB:P32114 (MGI:MGI:4822275|PMID:20727173) RGD PMID:20727173 MGI:MGI:4822275 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO MGI:MGI:1857425 (MGI:MGI:2451279|PMID:12585968) RGD PMID:12585968 MGI:MGI:2451279 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:MGI:98218 (MGI:MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:MGI:1306737 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:MGI:97712 (MGI:MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:MGI:1306737 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q ISO MGI:MGI:2679316 (MGI:MGI:2677560|PMID:14534255) RGD PMID:14534255 MGI:MGI:2677560 NCBI chr 7:49,763,657...50,034,932
Ensembl chr 7:49,763,657...50,034,932
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 ISO MGI:MGI:2183225 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:106034 (MGI:MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:MGI:3578604 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO MGI:MGI:102780 (MGI:MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:MGI:3578604 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:MGI:4417931 (MGI:MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Sobp sine oculis binding protein homolog ISO MGI:MGI:1856614 (MGI:MGI:3664354|PMID:16962269) RGD PMID:16962269 MGI:MGI:3664354 NCBI chr20:47,731,713...47,910,466
Ensembl chr20:47,750,762...47,910,375
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:MGI:2447995 (MGI:MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:MGI:3578496 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:MGI:3578633|MGI:MGI:99604 (MGI:MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:MGI:3577817 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:MGI:2179136|MGI:MGI:2179190|MGI:MGI:2179191|MGI:MGI:3046196|MGI:MGI:3619149 (MGI:MGI:2671642|PMID:12913075), (MGI:MGI:3039048|PMID:15084464), (MGI:MGI:3530686|PMID:15652707), (MGI:MGI:3629255|PMID:16600992)
UniProt
RGD
PMID:12913075, PMID:15084464, PMID:15652707, PMID:16600992 GO_REF:0000024, MGI:MGI:2671642, MGI:MGI:3039048, MGI:MGI:3530686, MGI:MGI:3629255 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO
IEA
ISS
(PMID:21204207)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21204207 GO_REF:0000024, GO_REF:0000107 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Tmie transmembrane inner ear ISO
IBA
MGI:MGI:1857053 (MGI:MGI:2183496|PMID:12140191)
PMID:21873635
RGD PMID:12140191, PMID:21873635 MGI:MGI:2183496, RGD:13792537 NCBI chr 8:119,142,116...119,157,071
Ensembl chr 8:119,142,434...119,157,071
JBrowse link
G Ush1c USH1 protein network component harmonin ISO
IBA
MGI:MGI:2651858|MGI:MGI:2651859 (MGI:MGI:2675093|PMID:14519688)
PMID:21873635
RGD PMID:14519688, PMID:21873635 MGI:MGI:2675093, RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Ush1g USH1 protein network component sans ISO MGI:MGI:2450561 (MGI:MGI:2450572|PMID:12588793), (MGI:MGI:49706|PMID:1927362) RGD PMID:1927362, PMID:12588793 MGI:MGI:2450572, MGI:MGI:49706 NCBI chr10:103,866,566...103,873,416
Ensembl chr10:103,869,377...103,873,246
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:98956 (MGI:MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:MGI:3582112 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:98953 (MGI:MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:MGI:3582112 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:MGI:3823145 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 ISO MGI:MGI:1857637 (MGI:MGI:65725|PMID:8152482) RGD PMID:8152482 MGI:MGI:65725 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:2150426 (MGI:MGI:1344210|PMID:10471511) RGD PMID:10471511 MGI:MGI:1344210 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 ISO MGI:MGI:3775095 (MGI:MGI:3774741|PMID:18219393) RGD PMID:18219393 MGI:MGI:3774741 NCBI chr 1:23,237,617...23,611,580
Ensembl chr 1:23,409,408...23,610,164
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
MGI:MGI:3574787 (MGI:MGI:3527944|PMID:15630379)
GO_REF:0000107
RGD
Ensembl
PMID:15630379 GO_REF:0000107, MGI:MGI:3527944 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:MGI:2388397 (MGI:MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gsc goosecoid homeobox ISO (MGI:MGI:3035838|PMID:14973294) RGD PMID:14973294 MGI:MGI:3035838 NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:MGI:102778|MGI:MGI:1857530|MGI:MGI:2385711 (MGI:MGI:3525808|PMID:15634706), (MGI:MGI:3587518|PMID:15861402), (MGI:MGI:3608156|PMID:16221728) RGD PMID:15634706, PMID:15861402, PMID:16221728 MGI:MGI:3525808, MGI:MGI:3587518, MGI:MGI:3608156 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Insig1 insulin induced gene 1 ISO MGI:MGI:1920249 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 ISO MGI:MGI:1916289 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:MGI:1933766 (MGI:MGI:3611627|PMID:16330189) RGD PMID:16330189 MGI:MGI:3611627 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO MGI:MGI:2178233|MGI:MGI:2386570 (MGI:MGI:3712581|PMID:17523175) RGD PMID:17523175 MGI:MGI:3712581 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase ISO MGI:MGI:1934018 (MGI:MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:MGI:3769195 NCBI chr10:88,979,363...88,986,879
Ensembl chr10:88,979,383...88,986,867
JBrowse link
G Nkx3-2 NK3 homeobox 2 ISO MGI:MGI:1931319 (MGI:MGI:3035838|PMID:14973294) RGD PMID:14973294 MGI:MGI:3035838 NCBI chr14:73,813,531...73,818,489
Ensembl chr14:73,813,528...73,815,757
JBrowse link
G Nog noggin ISO
IEA
(PMID:10080184)
GO_REF:0000107
RGD
Ensembl
PMID:10080184 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
UniProtKB:Q91ZD1 (MGI:MGI:3848564|PMID:19389375)
GO_REF:0000024
RGD
UniProt
PMID:19389375 GO_REF:0000024, MGI:MGI:3848564 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO
ISS
(MGI:MGI:3848564|PMID:19389375)
GO_REF:0000024
RGD
UniProt
PMID:19389375 GO_REF:0000024, MGI:MGI:3848564 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 ISO
IEA
MGI:MGI:3626341 (MGI:MGI:3623660|PMID:16571658)
GO_REF:0000107
RGD
Ensembl
PMID:16571658 GO_REF:0000107, MGI:MGI:3623660 NCBI chr 3:63,489,081...63,507,918
Ensembl chr 3:63,489,074...63,507,926
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:MGI:1857640|MGI:MGI:98218 (MGI:MGI:1306737|PMID:9729491), (MGI:MGI:73363|PMID:7758948) RGD PMID:7758948, PMID:9729491 MGI:MGI:1306737, MGI:MGI:73363 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:MGI:97712 (MGI:MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:MGI:1306737 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Rpl38 ribosomal protein L38 ISO MGI:MGI:1861228 (MGI:MGI:4888466|PMID:21062742) RGD PMID:21062742 MGI:MGI:4888466 NCBI chr10:103,198,424...103,202,059
Ensembl chr 2:199,479,007...199,479,309
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:2655195 (MGI:MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:MGI:2671031 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six2 SIX homeobox 2 ISO MGI:MGI:96174 (MGI:MGI:3525808|PMID:15634706) RGD PMID:15634706 MGI:MGI:3525808 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1932522|MGI:MGI:2179190|MGI:MGI:2179191|MGI:MGI:3619149 (MGI:MGI:3530686|PMID:15652707), (MGI:MGI:3629255|PMID:16600992), (MGI:MGI:4822099|PMID:20501333)
UniProt
RGD
PMID:15652707, PMID:16600992, PMID:20501333 GO_REF:0000024, MGI:MGI:3530686, MGI:MGI:3629255, MGI:MGI:4822099 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 ISO MGI:MGI:3721421 (MGI:MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:MGI:3720547 NCBI chr18:80,860,995...80,907,744
Ensembl chr18:80,862,372...80,865,584
JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:95517 (MGI:MGI:2683889|PMID:14623822) RGD PMID:14623822 MGI:MGI:2683889 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf3 fibroblast growth factor 3 ISO MGI:MGI:1099809|MGI:MGI:96604 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:95117 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153790 (MGI:MGI:1197797|PMID:9435295) RGD PMID:9435295 MGI:MGI:1197797 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Hesx1 HESX homeobox 1 ISO MGI:MGI:1931124 (MGI:MGI:1206234|PMID:9620767) RGD PMID:9620767 MGI:MGI:1206234 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:1932522|MGI:MGI:2385468 (MGI:MGI:3795349|PMID:18377888)
GO_REF:0000024
RGD
UniProt
PMID:18377888 GO_REF:0000024, MGI:MGI:3795349 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tcap titin-cap ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:2150426 (MGI:MGI:3702803|PMID:16916509) RGD PMID:16916509 MGI:MGI:3702803 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Tbx1 T-box transcription factor 1 ISO MGI:MGI:3046793 (MGI:MGI:3703494|PMID:17074316) RGD PMID:17074316 MGI:MGI:3703494 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
otolith formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO MGI:MGI:1856106 (MGI:MGI:53623|PMID:5367369) RGD PMID:5367369 MGI:MGI:53623 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 ISO MGI:MGI:2443955 (MGI:MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:MGI:5519140 NCBI chr 4:126,615,998...126,717,434
Ensembl chr 4:126,617,244...126,644,895
JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 ISO MGI:MGI:107935 (MGI:MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:MGI:5519140 NCBI chr 7:69,213,098...69,263,251
Ensembl chr 7:69,213,147...69,263,142
JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:3,958,424...4,080,028
Ensembl chr18:3,958,432...4,080,025
JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:2150426 (MGI:MGI:1344210|PMID:10471511) RGD PMID:10471511 MGI:MGI:1344210 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
MGI:MGI:3574787 (MGI:MGI:3527944|PMID:15630379)
GO_REF:0000107
RGD
Ensembl
PMID:15630379 GO_REF:0000107, MGI:MGI:3527944 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:MGI:2388397 (MGI:MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO MGI:MGI:1346859 (MGI:MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:MGI:3832113 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO MGI:MGI:1346858 (MGI:MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:MGI:3832113 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 ISO
IEA
MGI:MGI:3626341 (MGI:MGI:3623660|PMID:16571658)
GO_REF:0000107
RGD
Ensembl
PMID:16571658 GO_REF:0000107, MGI:MGI:3623660 NCBI chr 3:63,489,081...63,507,918
Ensembl chr 3:63,489,074...63,507,926
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
MGI:MGI:1932522|MGI:MGI:3619149 (MGI:MGI:3629255|PMID:16600992)
GO_REF:0000024
RGD
UniProt
PMID:16600992 GO_REF:0000024, MGI:MGI:3629255 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 ISO (MGI:MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:MGI:5635320 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647 (MGI:MGI:3575490|PMID:15765517) RGD PMID:15765517 MGI:MGI:3575490 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:MGI:98493 (MGI:MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:MGI:4397600 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:1857803 (MGI:MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:MGI:1335261 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:95517 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf3 fibroblast growth factor 3 ISO MGI:MGI:1099809 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO MGI:MGI:3037444 (MGI:MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:MGI:2157256 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
MGI:MGI:2444748 (MGI:MGI:4397600|PMID:19855134)
GO_REF:0000024
RGD
UniProt
PMID:19855134 GO_REF:0000024, MGI:MGI:4397600 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO
IEA
MGI:MGI:1861230 (MGI:MGI:5294688|PMID:21980308)
GO_REF:0000107
RGD
Ensembl
PMID:21980308 GO_REF:0000107, MGI:MGI:5294688 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase, receptor type, Q ISO
IEA
MGI:MGI:2679316 (MGI:MGI:5315778|PMID:22357859)
GO_REF:0000107
RGD
Ensembl
PMID:22357859 GO_REF:0000107, MGI:MGI:5315778 NCBI chr 7:49,763,657...50,034,932
Ensembl chr 7:49,763,657...50,034,932
JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107, MGI:MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure morphogenesis 2877
        animal organ morphogenesis 1151
          embryonic organ morphogenesis 336
            ear morphogenesis 140
              inner ear morphogenesis + 119
              middle ear morphogenesis 24
              outer ear morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            animal organ development 4035
              animal organ morphogenesis 1151
                sensory organ morphogenesis 321
                  ear morphogenesis 140
                    inner ear morphogenesis + 119
                    middle ear morphogenesis 24
                    outer ear morphogenesis + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.