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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial nucleoid
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Accession:GO:0042645 term browser browse the term
Definition:The region of a mitochondrion to which the DNA is confined.


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mitochondrial nucleoid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACADVL acyl-CoA dehydrogenase very long chain JBrowse link 17 7,217,125 7,225,267 RGD:2290271
G ATAD3A ATPase family AAA domain containing 3A JBrowse link 1 1,512,143 1,534,687 RGD:2290271
G ATP5F1B ATP synthase F1 subunit beta JBrowse link 12 56,638,175 56,645,984 RGD:2290271
G CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit X JBrowse link 15 65,148,219 65,185,374 RGD:2290271
G CPS1 carbamoyl-phosphate synthase 1 JBrowse link 2 210,477,685 210,679,107 RGD:2290271
G DBT dihydrolipoamide branched chain transacylase E2 JBrowse link 1 100,186,919 100,249,864 RGD:2290271
G DDX28 DEAD-box helicase 28 JBrowse link 16 68,020,916 68,023,232 RGD:2290271
G DHX30 DExH-box helicase 30 JBrowse link 3 47,802,909 47,850,196 RGD:2290271
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 JBrowse link 16 4,425,805 4,456,775 RGD:2290271
G ELAC2 elaC ribonuclease Z 2 JBrowse link 17 12,991,612 13,018,064 RGD:2290271
G FASTKD2 FAST kinase domains 2 JBrowse link 2 206,765,388 206,796,189 RGD:2290271
G FASTKD5 FAST kinase domains 5 JBrowse link 20 3,146,519 3,159,865 RGD:2290271
G GRSF1 G-rich RNA sequence binding factor 1 JBrowse link 4 70,815,783 70,843,274 RGD:2290271
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha JBrowse link 2 26,190,635 26,244,632 RGD:2290271
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta JBrowse link 2 26,244,748 26,290,465 RGD:2290271
G HSPA9 heat shock protein family A (Hsp70) member 9 JBrowse link 5 138,553,756 138,575,401 RGD:2290271
G LONP1 lon peptidase 1, mitochondrial JBrowse link 19 5,691,834 5,720,452 RGD:2290271
G LRPPRC leucine rich pentatricopeptide repeat containing JBrowse link 2 43,886,224 43,995,989 RGD:2290271
G LRRC59 leucine rich repeat containing 59 JBrowse link 17 50,381,238 50,397,523 RGD:2290271
G MPG N-methylpurine DNA glycosylase JBrowse link 16 77,019 85,851 RGD:2290271
G MTERF1 mitochondrial transcription termination factor 1 JBrowse link 7 91,870,929 91,880,733 RGD:2290271
G MTERF2 mitochondrial transcription termination factor 2 JBrowse link 12 106,972,856 106,987,166 RGD:2290271
G POLDIP2 DNA polymerase delta interacting protein 2 JBrowse link 17 28,346,628 28,357,589 RGD:2290271
G POLG DNA polymerase gamma, catalytic subunit JBrowse link 15 89,316,305 89,334,824 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G POLRMT RNA polymerase mitochondrial JBrowse link 19 617,221 633,557 RGD:2290271
G PRORP protein only RNase P catalytic subunit JBrowse link 14 35,122,303 35,277,622 RGD:2290271
G SHMT2 serine hydroxymethyltransferase 2 JBrowse link 12 57,229,685 57,234,935 RGD:2290271
G SLC25A5 solute carrier family 25 member 5 JBrowse link X 119,468,444 119,471,396 RGD:2290271
G SSBP1 single stranded DNA binding protein 1 JBrowse link 7 141,738,321 141,750,488 RGD:2290271
G SUPV3L1 Suv3 like RNA helicase JBrowse link 10 69,180,234 69,209,093 RGD:2290271
G TEFM transcription elongation factor, mitochondrial JBrowse link 17 30,898,983 30,907,629 RGD:2290271
G TERT telomerase reverse transcriptase JBrowse link 5 1,253,148 1,295,068 RGD:2290271
G TFAM transcription factor A, mitochondrial JBrowse link 10 58,385,143 58,399,230 RGD:2290271
G TFB1M transcription factor B1, mitochondrial JBrowse link 6 155,229,871 155,314,497 RGD:2290271
G TFB2M transcription factor B2, mitochondrial JBrowse link 1 246,540,561 246,566,261 RGD:2290271
G TOP1MT DNA topoisomerase I mitochondrial JBrowse link 8 143,309,324 143,359,977 RGD:2290271
G TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 3 101,561,868 101,566,446 RGD:2290271
G TUFM Tu translation elongation factor, mitochondrial JBrowse link 16 28,842,411 28,859,562 RGD:2290271
G TWNK twinkle mtDNA helicase JBrowse link 10 100,987,543 100,994,403 RGD:2290271
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 6 33,696,764 33,711,700 RGD:2290271
G VDAC1 voltage dependent anion channel 1 JBrowse link 5 133,971,871 134,070,987 RGD:2290271
G VDAC2 voltage dependent anion channel 2 JBrowse link 10 75,210,154 75,231,448 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19008
    cellular anatomical entity 18811
      nucleoid 44
        mitochondrial nucleoid 44
          mitochondrial chromosome 0
Path 2
Term Annotations click to browse term
  cellular_component 19008
    cellular anatomical entity 18811
      organelle 13891
        intracellular organelle 12846
          intracellular membrane-bounded organelle 11049
            mitochondrion 1649
              mitochondrial matrix 477
                mitochondrial nucleoid 44
                  mitochondrial chromosome 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.