Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:defense response to bacterium
go back to main search page
Accession:GO:0042742 term browser browse the term
Definition:Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
Synonyms:exact_synonym: defence response to bacteria;   defence response to bacterium;   defense response to bacteria
 related_synonym: antibacterial peptide activity
 alt_id: GO:0042830


show annotations for term's descendants       view all columns           Sort by:
 
defense response to bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abo3 histo-blood group ABO system transferase 3 JBrowse link 3 5,109,880 5,127,376 RGD:625392
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 JBrowse link 13 89,622,996 89,632,485 RGD:1624291
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 JBrowse link 11 25,411,174 25,456,639 RGD:1624291
RGD:1600115
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:1624291
RGD:1600115
G Ankrd17 ankyrin repeat domain 17 JBrowse link 14 19,291,025 19,431,521 RGD:1624291
RGD:1600115
G Anxa3 annexin A3 JBrowse link 14 14,371,921 14,426,503 RGD:1624291
RGD:1600115
G Bcl3 BCL3, transcription coactivator JBrowse link 1 80,730,758 80,745,273 RGD:1624291
G Bpi bactericidal/permeability-increasing protein JBrowse link 3 154,741,627 154,768,584 RGD:1331346
G Bpifa2 BPI fold containing family A, member 2 JBrowse link 3 149,492,612 149,501,614 RGD:1600115
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:1624291
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:632396
G Cd209 CD209 molecule JBrowse link 12 2,406,879 2,413,324 RGD:1624291
RGD:1600115
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:1624291
RGD:1600115
G Cebpe CCAAT/enhancer binding protein epsilon JBrowse link 15 33,356,119 33,357,517 RGD:1600115
RGD:1624291
G Clec4d C-type lectin domain family 4, member D JBrowse link 4 156,253,084 156,264,766 RGD:1624291
RGD:1600115
G Clec4e C-type lectin domain family 4, member E JBrowse link 4 156,271,087 156,276,243 RGD:1624291
RGD:1600115
G Coch cochlin JBrowse link 6 72,359,702 72,373,710 RGD:1624291
RGD:1600115
G Cxcl13 C-X-C motif chemokine ligand 13 JBrowse link 14 15,253,146 15,258,221 RGD:1624291
G Defa10 defensin alpha 10 JBrowse link 16 75,498,236 75,499,012 RGD:1624291
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:1299571
G Defa6 defensin alpha 6 JBrowse link 16 75,400,781 75,401,655 RGD:1624291
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:1624291
G Defb10 defensin beta 10 JBrowse link 16 75,198,178 75,208,230 RGD:1600115
G Defb11 defensin beta 11 JBrowse link 16 75,146,200 75,156,555 RGD:1600115
G Defb12 defensin beta 12 JBrowse link 16 75,118,002 75,120,417 RGD:1600115
G Defb13 defensin beta 13 JBrowse link 16 75,027,131 75,028,977 RGD:1600115
G Defb14 defensin beta 14 JBrowse link 16 75,647,523 75,650,913 RGD:1624291
RGD:13792537
G Defb15 defensin beta 15 JBrowse link 16 75,105,290 75,107,931 RGD:1600115
G Defb17 defensin beta 17 JBrowse link 9 24,506,246 24,509,761 RGD:1600115
G Defb18 defensin beta 18 JBrowse link 9 24,466,981 24,467,892 RGD:1600115
G Defb2 defensin beta 2 JBrowse link 16 75,227,468 75,241,303 RGD:1624291
G Defb20 defensin beta 20 JBrowse link 3 147,952,879 147,955,502 RGD:1600115
G Defb21 defensin beta 21 JBrowse link 3 148,047,638 148,048,952 RGD:1600115
G Defb22 defensin beta 22 JBrowse link 3 147,961,818 147,966,097 RGD:1600115
G Defb23 defensin beta 23 JBrowse link 3 147,928,201 147,932,413 RGD:1600115
G Defb25 defensin beta 25 JBrowse link 3 148,103,643 148,104,483 RGD:1600115
G Defb26 defensin beta 26 JBrowse link 3 147,982,213 147,985,616 RGD:1600115
G Defb27 defensin beta 27 JBrowse link 3 148,069,144 148,073,877 RGD:1600115
G Defb29 defensin beta 29 JBrowse link 3 148,008,820 148,014,101 RGD:1600115
G Defb3 beta-defensin 3 RGD:13792537
G Defb30 defensin beta 30 JBrowse link 15 46,220,136 46,223,429 RGD:1600115
G Defb33 defensin beta 33 JBrowse link 16 75,578,681 75,585,475 RGD:13792537
G Defb36 defensin beta 36 JBrowse link 3 148,082,790 148,091,621 RGD:1600115
G Defb38 defensin beta 38 JBrowse link 16 75,058,572 75,061,804 RGD:1600115
G Defb39 defensin beta 39 JBrowse link 16 75,042,516 75,046,320 RGD:1600115
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:1624291
RGD:13792537
G Defb41 defensin beta 41 JBrowse link 15 46,179,787 46,182,308 RGD:13792537
G Defb42 defensin beta 42 JBrowse link 15 46,159,511 46,166,335 RGD:13792537
G Defb43 defensin beta 43 JBrowse link 15 46,196,771 46,201,271 RGD:1600115
G Defb44 defensin beta 44 JBrowse link 15 46,235,942 46,237,658 RGD:1600115
G Defb49 defensin beta 49 JBrowse link 9 24,445,115 24,451,499 RGD:1600115
G Defb5 defensin beta 5 JBrowse link 16 75,597,323 75,599,483 RGD:1624291
RGD:13792537
G Defb50 defensin beta 50 JBrowse link 16 75,249,704 75,262,002 RGD:1600115
G Defb9 defensin beta 9 JBrowse link 16 75,176,307 75,179,090 RGD:1600115
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:1624291
G Eppin epididymal peptidase inhibitor JBrowse link 3 161,043,761 161,050,550 RGD:1624291
RGD:1600115
G Epx eosinophil peroxidase JBrowse link 10 75,160,690 75,171,774 RGD:13792537
G Fcer1g Fc fragment of IgE receptor Ig JBrowse link 13 89,601,894 89,606,326 RGD:1624291
RGD:13792537
G Fcgr1a Fc fragment of IgG receptor Ia JBrowse link 2 198,430,536 198,439,453 RGD:1624291
G Fpr2 formyl peptide receptor 2 JBrowse link 1 59,800,558 59,809,507 RGD:1624291
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
RGD:13792537
G Hist1h2bg histone cluster 1, H2bg JBrowse link 17 43,817,316 43,817,717 RGD:1600115
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1600115
G Ifnb1 interferon beta 1 JBrowse link 5 106,865,192 106,865,746 RGD:1624291
G Ifne interferon, epsilon JBrowse link 5 107,232,651 107,235,943 RGD:1624291
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
RGD:1600115
G Igh-6 immunoglobulin heavy chain 6 RGD:13792537
G Ighg1 immunoglobulin heavy constant gamma 1 JBrowse link 6 139,140,572 139,784,388 RGD:1624291
RGD:13792537
G Igkc immunoglobulin kappa constant RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 JBrowse link 11 88,388,378 88,391,524 RGD:13792537
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:1624291
RGD:1600115
G Irf8 interferon regulatory factor 8 JBrowse link 19 54,314,859 54,336,643 RGD:1624291
RGD:1600115
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:1624291
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 5 173,624,862 173,629,124 RGD:1624291
RGD:1600115
G Lcn2 lipocalin 2 JBrowse link 3 11,414,189 11,417,534 RGD:1600115
RGD:1624291
G LOC100909797 RT1 class I histocompatibility antigen, AA alpha chain-like JBrowse link 20 3,242,236 3,253,995 RGD:1624291
G LOC100910270 uncharacterized LOC100910270 JBrowse link 14 7,505,912 7,514,158 RGD:1600115
G LOC100912990 beta-defensin 12-like JBrowse link 16 75,109,946 75,110,960 RGD:1600115
G LOC290595 hypothetical gene supported by AF152002 JBrowse link 16 14,352,998 14,360,604 RGD:1600115
G LOC362795 immunoglobulin G heavy chain JBrowse link 6 138,192,156 138,201,560 RGD:13792537
G Lpo lactoperoxidase JBrowse link 10 75,100,385 75,120,247 RGD:1624291
RGD:13792537
G Lyg2 lysozyme G2 JBrowse link 9 44,497,508 44,509,921 RGD:1624291
G Lyst lysosomal trafficking regulator JBrowse link 17 90,323,055 90,522,091 RGD:1624291
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:1624291
RGD:1600115
G Lyzl4 lysozyme-like 4 JBrowse link 8 130,219,984 130,228,066 RGD:1624291
RGD:1600115
G Lyzl6 lysozyme-like 6 JBrowse link 10 91,694,547 91,701,428 RGD:1624291
G Mavs mitochondrial antiviral signaling protein JBrowse link 3 123,776,147 123,790,572 RGD:1624291
RGD:1600115
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:13792537
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:13792537
G Muc5b mucin 5B, oligomeric mucus/gel-forming JBrowse link 1 214,778,459 214,811,237 RGD:1624291
G Myd88 MYD88, innate immune signal transduction adaptor JBrowse link 8 128,022,512 128,027,462 RGD:1624291
G Naip6 NLR family, apoptosis inhibitory protein 6 JBrowse link 2 30,377,505 30,418,578 RGD:1624291
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:1624291
G Nlrc4 NLR family, CARD domain containing 4 JBrowse link 6 22,167,874 22,194,755 RGD:1624291
RGD:13792537
RGD:1600115
G Nlrp1a NLR family, pyrin domain containing 1A JBrowse link 10 57,692,474 57,747,608 RGD:1624291
G Nod1 nucleotide-binding oligomerization domain containing 1 JBrowse link 4 85,123,965 85,175,206 RGD:1624291
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
RGD:13792537
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:1624291
RGD:13792537
RGD:1600115
G Notch2 notch receptor 2 JBrowse link 2 200,187,184 200,320,403 RGD:1624291
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
RGD:1600115
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1600115
RGD:1624291
G Plac8 placenta associated 8 JBrowse link 14 10,692,799 10,714,556 RGD:1624291
RGD:1600115
G Prg2 proteoglycan 2 JBrowse link 3 72,385,678 72,389,245 RGD:1600115
G Prkcd protein kinase C, delta JBrowse link 16 6,655,131 6,675,746 RGD:1600115
RGD:1624291
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:1600115
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
RGD:1600115
G Rag2 recombination activating 2 JBrowse link 3 91,191,837 91,200,134 RGD:1624291
RGD:1600115
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 14 59,657,738 59,865,427 RGD:1624291
G RGD1564318 similar to immunoglobulin light chain variable region RGD:13792537
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:1624291
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 JBrowse link 20 1,814,661 1,833,033 RGD:1600115
G S100a14 S100 calcium binding protein A14 JBrowse link 2 189,913,433 189,919,947 RGD:1624291
G Serpinb9 serpin family B member 9 JBrowse link 17 32,648,846 32,673,047 RGD:1624291
RGD:1600115
G Shc1 SHC adaptor protein 1 JBrowse link 2 188,745,503 188,757,066 RGD:1600115
RGD:1624291
G Slamf8 SLAM family member 8 JBrowse link 13 90,967,862 90,978,752 RGD:1624291
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:1624291
G Spag11a sperm associated antigen 11A JBrowse link 16 75,666,439 75,668,180 RGD:1600115
G Spn sialophorin JBrowse link 1 198,572,999 198,585,664 RGD:1624291
G Spon2 spondin 2 JBrowse link 14 82,815,158 82,824,529 RGD:1624291
G Stab1 stabilin 1 JBrowse link 16 7,220,434 7,250,934 RGD:1624291
RGD:1600115
G Stab2 stabilin 2 JBrowse link 7 27,369,853 27,552,078 RGD:1624291
G Stath statherin JBrowse link 14 21,957,013 21,960,871 RGD:1600115
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1600115
RGD:1624291
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1624291
G Tlr5 toll-like receptor 5 JBrowse link 13 101,364,784 101,385,764 RGD:1600115
G Tmf1 TATA element modulatory factor 1 JBrowse link 4 129,521,986 129,546,024 RGD:1624291
RGD:1600115
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:1624291
RGD:1600115
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Wfdc12 WAP four-disulfide core domain 12 JBrowse link 3 160,581,449 160,581,798 RGD:1624291
RGD:1600115
antibacterial humoral response term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1624291
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10400853
RGD:1624291
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:1624291
G Bpi bactericidal/permeability-increasing protein JBrowse link 3 154,741,627 154,768,584 RGD:1624291
G Bpifa1 BPI fold containing family A, member 1 JBrowse link 3 149,624,867 149,630,610 RGD:1624291
RGD:1600115
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:1624291
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1600115
RGD:1624291
G Defa11 defensin alpha 11 JBrowse link 16 75,517,421 75,519,605 RGD:13792537
G Defa24 defensin alpha 24 JBrowse link 16 75,345,086 75,346,122 RGD:13792537
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:13792537
G Defa6 defensin alpha 6 JBrowse link 16 75,400,781 75,401,655 RGD:13792537
G Defa8 defensin alpha 8 JBrowse link 16 75,428,675 75,429,568 RGD:13792537
G Defa9 defensin alpha 9 JBrowse link 16 75,465,710 75,466,604 RGD:13792537
G Defal1 defensin alpha-like 1 JBrowse link 16 75,366,925 75,367,985 RGD:13792537
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:1624291
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion JBrowse link 1 221,420,312 221,421,827 RGD:1624291
G Hist1h2bd histone cluster 1 H2B family member D JBrowse link 17 44,833,924 44,834,305 RGD:1624291
G Hist1h2bk histone cluster 1 H2B family member k JBrowse link 17 44,527,421 44,527,801 RGD:1624291
G Hist1h2bq histone cluster 1 H2B family member Q JBrowse link 17 43,679,925 43,689,311 RGD:1624291
G Hist2h2be histone cluster 2 H2B family member E JBrowse link 2 198,360,837 198,363,399 RGD:1624291
G Ighg1 immunoglobulin heavy constant gamma 1 JBrowse link 6 139,140,572 139,784,388 RGD:1624291
G Jchain joining chain of multimeric IgA and IgM JBrowse link 14 21,176,841 21,183,731 RGD:1624291
G LOC100364500 RT1 class I, locus CE11-like JBrowse link 20 2,704,153 2,707,111 RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
RGD:1600115
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
RGD:13792537
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:1624291
G Pla2g1b phospholipase A2 group IB JBrowse link 12 46,879,346 46,890,234 RGD:1624291
RGD:1600115
G Pla2g6 phospholipase A2 group VI JBrowse link 7 120,519,479 120,559,716 RGD:1624291
RGD:1600115
G RatNP-3b defensin RatNP-3 precursor JBrowse link 16 75,528,348 75,530,511 RGD:13792537
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Rnase6 ribonuclease A family member k6 JBrowse link 15 28,080,307 28,084,269 RGD:1624291
G Rpl39 ribosomal protein L39 JBrowse link X 123,705,241 123,707,257 RGD:1624291
G RT1-S3 RT1 class Ib, locus S3 JBrowse link 20 3,176,124 3,180,825 RGD:1624291
G Semg1 semenogelin 1 JBrowse link 3 160,627,609 160,630,457 RGD:1624291
G Slpi secretory leukocyte peptidase inhibitor JBrowse link 3 160,799,979 160,802,228 RGD:1624291
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:1624291
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:1624291
antibacterial peptide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
antibacterial peptide secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:1624291
RGD:1600115
defense response to Gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:1624291
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10400853
RGD:1624291
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:1624291
G Bpi bactericidal/permeability-increasing protein JBrowse link 3 154,741,627 154,768,584 RGD:13792537
RGD:1624291
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:2316237
RGD:1624291
RGD:13792537
G Cd160 CD160 molecule JBrowse link 2 198,933,681 198,965,380 RGD:1624291
RGD:1600115
G Cd4 Cd4 molecule JBrowse link 4 157,381,862 157,408,357 RGD:1624291
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:1600115
RGD:1624291
G Cst11 cystatin 11 JBrowse link 3 143,096,056 143,098,780 RGD:1624291
RGD:13792537
RGD:1600115
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1600115
RGD:1624291
G Defa10 defensin alpha 10 JBrowse link 16 75,498,236 75,499,012 RGD:1624291
G Defa11 defensin alpha 11 JBrowse link 16 75,517,421 75,519,605 RGD:13792537
G Defa24 defensin alpha 24 JBrowse link 16 75,345,086 75,346,122 RGD:13792537
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:1624291
RGD:13792537
G Defa6 defensin alpha 6 JBrowse link 16 75,400,781 75,401,655 RGD:1624291
RGD:13792537
G Defa8 defensin alpha 8 JBrowse link 16 75,428,675 75,429,568 RGD:13792537
G Defa9 defensin alpha 9 JBrowse link 16 75,465,710 75,466,604 RGD:13792537
G Defal1 defensin alpha-like 1 JBrowse link 16 75,366,925 75,367,985 RGD:13792537
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:1624291
RGD:1600115
G Defb13 defensin beta 13 JBrowse link 16 75,027,131 75,028,977 RGD:1624291
G Defb14 defensin beta 14 JBrowse link 16 75,647,523 75,650,913 RGD:1624291
G Defb15 defensin beta 15 JBrowse link 16 75,105,290 75,107,931 RGD:1624291
G Defb20 defensin beta 20 JBrowse link 3 147,952,879 147,955,502 RGD:1624291
G Defb21 defensin beta 21 JBrowse link 3 148,047,638 148,048,952 RGD:1624291
G Defb22 defensin beta 22 JBrowse link 3 147,961,818 147,966,097 RGD:1624291
G Defb24 defensin beta 24 JBrowse link 3 148,051,364 148,057,497 RGD:1600115
RGD:1624291
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:1624291
RGD:1600115
G Defb5 defensin beta 5 JBrowse link 16 75,597,323 75,599,483 RGD:1624291
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
RGD:1600115
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
RGD:1600115
G Galp galanin-like peptide JBrowse link 1 71,352,417 71,374,457 RGD:1624291
RGD:13792537
G Gsdmd gasdermin D JBrowse link 7 116,889,147 116,894,134 RGD:1624291
RGD:1600115
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
G Hist1h2bk histone cluster 1 H2B family member k JBrowse link 17 44,527,421 44,527,801 RGD:1624291
G Hist2h2be histone cluster 2 H2B family member E JBrowse link 2 198,360,837 198,363,399 RGD:1624291
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:1624291
RGD:1600115
G Hmgb2l1 high mobility group box 2-like 1 JBrowse link 11 49,708,038 49,709,128 RGD:1600115
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:1624291
RGD:1600115
G Il22ra1 interleukin 22 receptor subunit alpha 1 JBrowse link 5 154,078,093 154,102,903 RGD:1624291
RGD:1600115
G Il23a interleukin 23 subunit alpha JBrowse link 7 2,710,609 2,712,723 RGD:1624291
RGD:1600115
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:1624291
G Lalba lactalbumin, alpha JBrowse link 7 140,088,420 140,096,347 RGD:13792537
G Lbp lipopolysaccharide binding protein JBrowse link 3 154,786,232 154,812,910 RGD:1624291
RGD:13792537
RGD:1600115
G Lce3e late cornified envelope 3E JBrowse link 2 193,275,472 193,276,006 RGD:1624291
G LOC100912990 beta-defensin 12-like JBrowse link 16 75,109,946 75,110,960 RGD:1624291
G LOC103694852 ribonuclease K6-like RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1600115
RGD:1624291
G Lyc2 lysozyme C type 2 JBrowse link 7 60,316,045 60,323,610 RGD:13792537
G Lypd8 LY6/PLAUR domain containing 8 JBrowse link 10 43,817,773 43,828,812 RGD:1624291
RGD:13792537
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:1599862
RGD:13792537
RGD:1624291
G Lyzl1 lysozyme-like 1 JBrowse link 17 56,255,613 56,269,245 RGD:13792537
G Lyzl4 lysozyme-like 4 JBrowse link 8 130,219,984 130,228,066 RGD:12793004
RGD:13792537
G Lyzl6 lysozyme-like 6 JBrowse link 10 91,694,547 91,701,428 RGD:13792537
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:1600115
RGD:1624291
G Mr1 major histocompatibility complex, class I-related JBrowse link 13 72,771,992 72,789,861 RGD:1624291
RGD:1600115
G Nlrp10 NLR family, pyrin domain containing 10 JBrowse link 1 173,521,412 173,528,969 RGD:1624291
RGD:1600115
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:1582113
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
RGD:13792537
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:1624291
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:1600115
RGD:1624291
G Peli3 pellino E3 ubiquitin protein ligase family member 3 JBrowse link 1 220,191,209 220,204,032 RGD:1624291
G Prkd1 protein kinase D1 JBrowse link 6 71,035,017 71,349,531 RGD:1624291
RGD:1600115
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:1624291
RGD:1600115
G Rarres2 retinoic acid receptor responder 2 JBrowse link 4 78,205,809 78,208,956 RGD:1624291
RGD:1600115
G RatNP-3b defensin RatNP-3 precursor JBrowse link 16 75,528,348 75,530,511 RGD:13792537
G Reg3b regenerating family member 3 beta JBrowse link 4 109,467,272 109,470,510 RGD:1600115
RGD:1624291
G Reg3g regenerating family member 3 gamma JBrowse link 4 109,529,679 109,532,234 RGD:1624291
RGD:1600115
G RGD1306474 similar to RIKEN cDNA 9530003J23 JBrowse link 7 60,305,006 60,309,878 RGD:13792537
G RGD1559962 similar to High mobility group protein 2 (HMG-2) JBrowse link 1 20,416,735 20,417,959 RGD:1600115
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Rnase6 ribonuclease A family member k6 JBrowse link 15 28,080,307 28,084,269 RGD:1624291
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:1624291
G Rpl30 ribosomal protein L30 JBrowse link 7 73,213,538 73,216,431 RGD:1624291
G Rps19 ribosomal protein S19 JBrowse link 1 81,750,873 81,756,629 RGD:1624291
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1624291
RGD:1600115
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:1624291
RGD:1600115
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:13792537
G Spaca5 sperm acrosome associated 5 JBrowse link X 912,770 915,953 RGD:13792537
G Ssc5d scavenger receptor cysteine rich family member with 5 domains JBrowse link 1 72,443,750 72,462,293 RGD:1624291
RGD:1600115
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:1624291
G Tfeb transcription factor EB JBrowse link 9 15,208,141 15,264,101 RGD:1624291
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1624291
RGD:13792537
RGD:1600115
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:1624291
G Tnfrsf14 TNF receptor superfamily member 14 JBrowse link 5 172,328,259 172,337,221 RGD:1624291
RGD:13792537
G Tslp thymic stromal lymphopoietin JBrowse link 18 25,613,601 25,618,066 RGD:1624291
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator JBrowse link 8 116,318,963 116,322,181 RGD:1624291
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:1624291
defense response to Gram-positive bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acp5 acid phosphatase 5, tartrate resistant JBrowse link 8 23,142,733 23,149,067 RGD:1624291
RGD:1600115
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1624291
RGD:1600115
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1624291
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10400853
RGD:1624291
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:1624291
G C5ar1 complement C5a receptor 1 JBrowse link 1 78,186,777 78,195,132 RGD:1624291
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:2316243
RGD:1624291
RGD:13792537
G Card9 caspase recruitment domain family, member 9 JBrowse link 3 3,798,346 3,806,841 RGD:1624291
RGD:1600115
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:1600115
RGD:1624291
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1624291
G Defa10 defensin alpha 10 JBrowse link 16 75,498,236 75,499,012 RGD:1624291
G Defa11 defensin alpha 11 JBrowse link 16 75,517,421 75,519,605 RGD:13792537
G Defa24 defensin alpha 24 JBrowse link 16 75,345,086 75,346,122 RGD:13792537
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:1624291
RGD:13792537
G Defa6 defensin alpha 6 JBrowse link 16 75,400,781 75,401,655 RGD:1624291
RGD:13792537
G Defa8 defensin alpha 8 JBrowse link 16 75,428,675 75,429,568 RGD:13792537
G Defa9 defensin alpha 9 JBrowse link 16 75,465,710 75,466,604 RGD:13792537
G Defal1 defensin alpha-like 1 JBrowse link 16 75,366,925 75,367,985 RGD:13792537
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:1600115
RGD:1624291
G Defb13 defensin beta 13 JBrowse link 16 75,027,131 75,028,977 RGD:1624291
G Defb14 defensin beta 14 JBrowse link 16 75,647,523 75,650,913 RGD:1624291
G Defb15 defensin beta 15 JBrowse link 16 75,105,290 75,107,931 RGD:1624291
G Defb20 defensin beta 20 JBrowse link 3 147,952,879 147,955,502 RGD:1624291
G Defb24 defensin beta 24 JBrowse link 3 148,051,364 148,057,497 RGD:1600115
RGD:1624291
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:1624291
RGD:1600115
G Defb5 defensin beta 5 JBrowse link 16 75,597,323 75,599,483 RGD:1624291
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
RGD:1600115
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
RGD:1600115
G Epha2 Eph receptor A2 JBrowse link 5 159,845,773 159,874,203 RGD:1624291
RGD:1600115
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion JBrowse link 1 221,420,312 221,421,827 RGD:1624291
G Fgr FGR proto-oncogene, Src family tyrosine kinase JBrowse link 5 151,172,189 151,199,746 RGD:1624291
RGD:1600115
G Gbp1 guanylate binding protein 1 JBrowse link 2 248,343,334 248,423,402 RGD:1624291
G Gbp2 guanylate binding protein 2 JBrowse link 2 248,276,795 248,293,784 RGD:1624291
RGD:13792537
RGD:1600115
G Gbp4 guanylate binding protein 4 JBrowse link 2 248,249,232 248,263,104 RGD:1624291
RGD:13792537
G Gsdmd gasdermin D JBrowse link 7 116,889,147 116,894,134 RGD:1624291
RGD:1600115
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:1624291
RGD:1600115
G Hck HCK proto-oncogene, Src family tyrosine kinase JBrowse link 3 148,579,917 148,623,026 RGD:1624291
G Hist1h2bd histone cluster 1 H2B family member D JBrowse link 17 44,833,924 44,834,305 RGD:1624291
G Hist1h2bk histone cluster 1 H2B family member k JBrowse link 17 44,527,421 44,527,801 RGD:1624291
G Hist1h2bq histone cluster 1 H2B family member Q JBrowse link 17 43,679,925 43,689,311 RGD:1624291
G Hist2h2be histone cluster 2 H2B family member E JBrowse link 2 198,360,837 198,363,399 RGD:1624291
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:1624291
RGD:1600115
G Hmgb2l1 high mobility group box 2-like 1 JBrowse link 11 49,708,038 49,709,128 RGD:1600115
G Il12a interleukin 12A JBrowse link 2 165,076,945 165,083,996 RGD:1624291
RGD:1600115
G Il27ra interleukin 27 receptor subunit alpha JBrowse link 19 25,151,835 25,163,995 RGD:1624291
RGD:1600115
G Kb15 type II keratin Kb15 JBrowse link 7 143,208,034 143,217,771 RGD:1624291
G Klrk1 killer cell lectin like receptor K1 JBrowse link 4 163,392,652 163,403,735 RGD:1624291
RGD:1600115
G Lalba lactalbumin, alpha JBrowse link 7 140,088,420 140,096,347 RGD:13792537
G Lbp lipopolysaccharide binding protein JBrowse link 3 154,786,232 154,812,910 RGD:1624291
RGD:13792537
RGD:1600115
G Lce3e late cornified envelope 3E JBrowse link 2 193,275,472 193,276,006 RGD:1624291
G LOC100364500 RT1 class I, locus CE11-like JBrowse link 20 2,704,153 2,707,111 RGD:1624291
G LOC100910070 lysozyme g-like protein 1-like JBrowse link 9 44,605,306 44,611,810 RGD:13792537
G LOC103690086 uncharacterized LOC103690086 JBrowse link 14 5,642,357 5,646,406 RGD:1624291
G LOC103693222 lysozyme g-like protein 2 JBrowse link 9 44,574,626 44,590,028 RGD:13792537
G LOC103694852 ribonuclease K6-like RGD:1624291
G LOC290595 hypothetical gene supported by AF152002 JBrowse link 16 14,352,998 14,360,604 RGD:1624291
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:1624291
RGD:1600115
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Lyc2 lysozyme C type 2 JBrowse link 7 60,316,045 60,323,610 RGD:13792537
G Lyg1 lysozyme G1 JBrowse link 9 44,527,596 44,539,320 RGD:13792537
G Lyg2 lysozyme G2 JBrowse link 9 44,497,508 44,509,921 RGD:1624291
RGD:13792537
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:1599862
RGD:13792537
RGD:1624291
G Lyzl1 lysozyme-like 1 JBrowse link 17 56,255,613 56,269,245 RGD:13792537
G Lyzl4 lysozyme-like 4 JBrowse link 8 130,219,984 130,228,066 RGD:13792537
G Lyzl6 lysozyme-like 6 JBrowse link 10 91,694,547 91,701,428 RGD:13792537
G Mbl1 mannose-binding lectin (protein A) 1 JBrowse link 16 18,736,154 18,742,193 RGD:1624291
RGD:1600115
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:1624291
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:1600115
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Myd88 MYD88, innate immune signal transduction adaptor JBrowse link 8 128,022,512 128,027,462 RGD:1600115
RGD:13792537
RGD:1624291
G Myo1f myosin IF JBrowse link 7 18,440,742 18,491,448 RGD:1624291
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:1624291
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 10 45,884,324 45,918,290 RGD:1624291
RGD:1600115
G Nod1 nucleotide-binding oligomerization domain containing 1 JBrowse link 4 85,123,965 85,175,206 RGD:1624291
RGD:1600115
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
RGD:13792537
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:1624291
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
G Pglyrp1 peptidoglycan recognition protein 1 JBrowse link 1 79,790,879 79,796,064 RGD:1600115
RGD:13792537
RGD:1624291
G Pglyrp2 peptidoglycan recognition protein 2 JBrowse link 7 14,426,481 14,435,987 RGD:1624291
RGD:13792537
G Pglyrp3 peptidoglycan recognition protein 3 JBrowse link 2 191,903,626 192,264,872 RGD:1624291
RGD:13792537
G Pglyrp3b peptidoglycan recognition protein 3b JBrowse link 2 191,900,147 191,916,863 RGD:13792537
G Pglyrp4 peptidoglycan recognition protein 4 JBrowse link 2 190,125,655 190,204,230 RGD:1624291
RGD:13792537
G Pla2g1b phospholipase A2 group IB JBrowse link 12 46,879,346 46,890,234 RGD:1624291
RGD:1600115
G Pld1 phospholipase D1 JBrowse link 2 113,651,967 113,849,403 RGD:1624291
G Ppp1r11 protein phosphatase 1, regulatory (inhibitor) subunit 11 JBrowse link 20 2,094,931 2,098,438 RGD:1624291
RGD:1600115
G Rarres2 retinoic acid receptor responder 2 JBrowse link 4 78,205,809 78,208,956 RGD:1624291
RGD:1600115
G RatNP-3b defensin RatNP-3 precursor JBrowse link 16 75,528,348 75,530,511 RGD:13792537
G Reg3b regenerating family member 3 beta JBrowse link 4 109,467,272 109,470,510 RGD:1600115
RGD:1624291
G Reg3g regenerating family member 3 gamma JBrowse link 4 109,529,679 109,532,234 RGD:1600115
RGD:1624291
G RGD1306474 similar to RIKEN cDNA 9530003J23 JBrowse link 7 60,305,006 60,309,878 RGD:13792537
G RGD1559962 similar to High mobility group protein 2 (HMG-2) JBrowse link 1 20,416,735 20,417,959 RGD:1600115
G Ripk2 receptor-interacting serine-threonine kinase 2 JBrowse link 5 29,838,713 29,870,390 RGD:1624291
RGD:1600115
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Rnase6 ribonuclease A family member k6 JBrowse link 15 28,080,307 28,084,269 RGD:1624291
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:1624291
G Rpl39 ribosomal protein L39 JBrowse link X 123,705,241 123,707,257 RGD:1624291
G RT1-S3 RT1 class Ib, locus S3 JBrowse link 20 3,176,124 3,180,825 RGD:1624291
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:1624291
RGD:1600115
G Seh1l SEH1-like nucleoporin JBrowse link 18 63,545,150 63,568,101 RGD:1624291
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:13792537
G Spaca5 sperm acrosome associated 5 JBrowse link X 912,770 915,953 RGD:13792537
G Ssc5d scavenger receptor cysteine rich family member with 5 domains JBrowse link 1 72,443,750 72,462,293 RGD:1624291
RGD:1600115
G Stab2 stabilin 2 JBrowse link 7 27,369,853 27,552,078 RGD:1600115
RGD:1624291
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:1624291
G Tbk1 TANK-binding kinase 1 JBrowse link 7 63,655,247 63,687,978 RGD:1624291
RGD:1600115
G Tirap TIR domain containing adaptor protein JBrowse link 8 36,382,029 36,399,625 RGD:1624291
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:1624291
RGD:1600115
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
G Tnfaip8 TNF alpha induced protein 8 JBrowse link 18 44,664,310 44,779,914 RGD:1624291
G Tnfrsf14 TNF receptor superfamily member 14 JBrowse link 5 172,328,259 172,337,221 RGD:1624291
RGD:13792537
G Tnfsf8 TNF superfamily member 8 JBrowse link 5 79,664,779 79,691,547 RGD:1624291
RGD:1600115
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:1624291
induced systemic resistance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myd88 MYD88, innate immune signal transduction adaptor JBrowse link 8 128,022,512 128,027,462 RGD:1624291
RGD:1600115
induction of bacterial agglutination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:1624291
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:1624291
RGD:1600115
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:1600115
RGD:1624291
G Spon2 spondin 2 JBrowse link 14 82,815,158 82,824,529 RGD:1624291
male-specific defense response to bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:2316780
negative regulation of antibacterial peptide production term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spink5 serine peptidase inhibitor, Kazal type 5 JBrowse link 18 35,118,300 35,190,458 RGD:1624291
negative regulation of defense response to bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:1600115
RGD:1624291
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:1624291
RGD:1600115
G Mapkbp1 mitogen activated protein kinase binding protein 1 JBrowse link 3 111,767,126 111,817,103 RGD:1624291
RGD:1600115
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:1624291
RGD:1600115
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:1600115
RGD:1624291
G Trem1 triggering receptor expressed on myeloid cells 1 JBrowse link 9 14,727,887 14,743,371 RGD:1624291
G Trem3 triggering receptor expressed on myeloid cells 3 JBrowse link 9 14,713,935 14,725,945 RGD:1600115
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator JBrowse link 8 116,318,963 116,322,181 RGD:1624291
RGD:1600115
neutrophil mediated killing of gram-positive bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1624291
RGD:1600115
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:1624291
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
positive regulation of antibacterial peptide production term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klk5 kallikrein related-peptidase 5 JBrowse link 1 99,781,291 99,793,745 RGD:1624291
G Klk7 kallikrein-related peptidase 7 JBrowse link 1 99,749,991 99,754,723 RGD:1624291
RGD:1600115
G Pgc progastricsin JBrowse link 9 15,266,699 15,274,917 RGD:1624291
RGD:1600115
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
positive regulation of defense response to bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:1624291
RGD:1600115
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:1600115
RGD:1624291
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:1624291
RGD:1600115
G Lgals9 galectin 9 JBrowse link 10 64,737,022 64,760,195 RGD:1624291
G Nlrp10 NLR family, pyrin domain containing 10 JBrowse link 1 173,521,412 173,528,969 RGD:1624291
RGD:1600115
G Rab34 RAB34, member RAS oncogene family JBrowse link 10 65,448,111 65,452,178 RGD:1624291
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2rl1 F2R like trypsin receptor 1 JBrowse link 2 25,222,324 25,235,275 RGD:1624291
RGD:1600115
regulation of defense response to bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:1624291
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:1624291
RGD:1600115
regulation of defense response to bacterium, incompatible interaction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tfeb transcription factor EB JBrowse link 9 15,208,141 15,264,101 RGD:1624291
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17967
    multi-organism process 2679
      response to other organism 1454
        defense response to other organism 897
          defense response to bacterium 271
            antibacterial humoral response + 51
            defense response to Gram-negative bacterium + 96
            defense response to Gram-positive bacterium + 118
            defense response to bacterium, incompatible interaction + 1
            induced systemic resistance + 1
            male-specific defense response to bacterium + 1
            negative regulation of defense response to bacterium + 5
            neutrophil mediated killing of bacterium + 9
            peptidoglycan recognition protein signaling pathway + 0
            positive regulation of defense response to bacterium + 12
            regulation of defense response to bacterium + 20
Path 2
Term Annotations click to browse term
  biological_process 17967
    response to stimulus 9826
      response to external stimulus 2910
        response to external biotic stimulus 1458
          response to other organism 1454
            response to bacterium 868
              defense response to bacterium 271
                antibacterial humoral response + 51
                defense response to Gram-negative bacterium + 96
                defense response to Gram-positive bacterium + 118
                defense response to bacterium, incompatible interaction + 1
                induced systemic resistance + 1
                male-specific defense response to bacterium + 1
                negative regulation of defense response to bacterium + 5
                neutrophil mediated killing of bacterium + 9
                peptidoglycan recognition protein signaling pathway + 0
                positive regulation of defense response to bacterium + 12
                regulation of defense response to bacterium + 20
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.