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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate metabolic process
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Accession:GO:0042822 term browser browse the term
Definition:The chemical reactions and pathways involving pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 metabolic process;   active vitamin B6 metabolism;   pyridoxal phosphate metabolism


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pyridoxal 5'-phosphate salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxk pyridoxal kinase JBrowse link 20 10,930,651 10,952,194 RGD:1600115
RGD:13792537
G RGD1566085 similar to pyridoxal (pyridoxine, vitamin B6) kinase JBrowse link 20 10,883,952 10,912,870 RGD:13792537
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxk pyridoxal kinase JBrowse link 20 10,930,651 10,952,194 RGD:2303018
G Pnpo pyridoxamine 5'-phosphate oxidase JBrowse link 10 84,874,926 84,881,190 RGD:1624291
RGD:13792537
pyridoxal phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxp pyridoxal phosphatase JBrowse link 7 120,140,460 120,145,908 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11953
      cellular metabolic process 10781
        cellular aldehyde metabolic process 65
          pyridoxal phosphate metabolic process 4
            pyridoxal phosphate biosynthetic process + 3
            pyridoxal phosphate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11953
      nitrogen compound metabolic process 10059
        cellular nitrogen compound metabolic process 6418
          pyridine-containing compound metabolic process 34
            vitamin B6 metabolic process 4
              pyridoxal phosphate metabolic process 4
                pyridoxal phosphate biosynthetic process + 3
                pyridoxal phosphate catabolic process 1
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.