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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845


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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxk pyridoxal kinase JBrowse link NW_004955407 41,482,216 41,494,174 RGD:9068941
G Pnpo pyridoxamine 5'-phosphate oxidase JBrowse link NW_004955451 13,184,861 13,190,933 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11826
    metabolic process 7569
      cellular metabolic process 6989
        cellular aromatic compound metabolic process 3713
          aromatic compound biosynthetic process 2681
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 0
Path 2
Term Annotations click to browse term
  biological_process 11826
    metabolic process 7569
      small molecule metabolic process 1229
        vitamin metabolic process 55
          water-soluble vitamin metabolic process 23
            water-soluble vitamin biosynthetic process 4
              vitamin B6 biosynthetic process 2
                pyridoxal phosphate biosynthetic process 2
                  'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                  pyridoxal 5'-phosphate salvage + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.