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ONTOLOGY REPORT - ANNOTATIONS


Term:histone deacetylase binding
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Accession:GO:0042826 term browser browse the term
Definition:Interacting selectively and non-covalently with the enzyme histone deacetylase.


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histone deacetylase binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chrNW_004955495:7,874,655...7,893,209
Ensembl chrNW_004955495:7,874,746...7,892,944
JBrowse link
G Akap8l A-kinase anchoring protein 8 like ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chrNW_004955495:7,839,339...7,874,432
Ensembl chrNW_004955495:7,839,339...7,874,432
JBrowse link
G Ankra2 ankyrin repeat family A member 2 ISO (PMID:22649097)
(MGI:3619886|PMID:16236793)
UniProtKB
MGI
UniProt
PMID:16236793 PMID:22649097 MGI:3619886 NCBI chrNW_004955425:27,035,850...27,045,253
Ensembl chrNW_004955425:27,035,850...27,045,633
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:20599664) BHF-UCL PMID:20599664 NCBI chrNW_004955425:2,258,554...2,267,699
Ensembl chrNW_004955425:2,258,392...2,267,878
JBrowse link
G Bcor BCL6 corepressor ISO (PMID:10898795) UniProtKB PMID:10898795 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 ISO (MGI:5306297|PMID:17487425) BHF-UCL PMID:17487425 MGI:5306297 NCBI chrNW_004955413:21,100,021...21,103,358 JBrowse link
G Camta2 calmodulin binding transcription activator 2 ISO (PMID:16678093) MGI PMID:16678093 NCBI chrNW_004955467:10,375,017...10,391,546
Ensembl chrNW_004955467:10,375,017...10,392,363
JBrowse link
G Cbx5 chromobox 5 ISO (MGI:4359370|PMID:12242305) BHF-UCL PMID:12242305 MGI:4359370 NCBI chrNW_004955458:1,486,951...1,529,649
Ensembl chrNW_004955458:1,486,951...1,505,653
JBrowse link
G Ccnd1 cyclin D1 ISO (PMID:18417529) UniProtKB PMID:18417529 NCBI chrNW_004955422:16,449,921...16,462,676
Ensembl chrNW_004955422:16,448,770...16,463,300
JBrowse link
G Cdc20 cell division cycle 20 ISO RGD PMID:19167333 RGD:2306262 NCBI chrNW_004955537:2,941,265...2,945,158
Ensembl chrNW_004955537:2,941,265...2,945,158
JBrowse link
G Cebpa CCAAT enhancer binding protein alpha ISO RGD PMID:23639777 RGD:9590170 NCBI chrNW_004955468:3,046,544...3,049,217
Ensembl chrNW_004955468:3,047,931...3,049,080
JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO (MGI:5619477|PMID:18486321) UniProt PMID:18486321 MGI:5619477 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ISO (PMID:27616479) UniProtKB PMID:27616479 NCBI chrNW_004955413:4,191,619...4,228,225 JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 ISO (MGI:5559665|PMID:21931736) UniProt PMID:21931736 MGI:5559665 NCBI chrNW_004955486:6,320,380...6,369,020
Ensembl chrNW_004955486:6,320,380...6,369,065
JBrowse link
G Cir1 corepressor interacting with RBPJ, CIR1 ISO (PMID:9874765) MGI PMID:9874765 NCBI chrNW_004955449:960,524...993,720
Ensembl chrNW_004955449:959,827...996,145
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Dact1 dishevelled binding antagonist of beta catenin 1 ISO (PMID:18936100) ParkinsonsUK-UCL PMID:18936100 NCBI chrNW_004955466:12,367,760...12,374,141
Ensembl chrNW_004955466:12,367,775...12,373,036
JBrowse link
G Ddx20 DEAD-box helicase 20 ISO (MGI:2178490|PMID:12007404) BHF-UCL PMID:12007404 MGI:2178490 NCBI chrNW_004955435:15,209,640...15,219,698
Ensembl chrNW_004955435:15,209,640...15,220,378
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (MGI:5559667|PMID:21590736) UniProt PMID:21590736 MGI:5559667 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:12473678 RGD:1359078 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:15632075 RGD:1601090 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301
JBrowse link
G Foxp3 forkhead box P3 ISO (PMID:17360565) BHF-UCL PMID:17360565 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606
JBrowse link
G Gcm1 glial cells missing transcription factor 1 ISO (PMID:23867755) UniProtKB PMID:23867755 NCBI chrNW_004955411:2,872,758...2,917,154
Ensembl chrNW_004955411:2,898,693...2,917,168
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (PMID:12435627) UniProtKB PMID:12435627 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Gmnn geminin DNA replication inhibitor ISO (PMID:16924111) UniProtKB PMID:16924111 NCBI chrNW_004955483:2,283,518...2,344,982
Ensembl chrNW_004955483:2,282,485...2,293,924
JBrowse link
G H1-5 H1.5 linker histone, cluster member ISO (PMID:22956909) UniProtKB PMID:22956909 NCBI chrNW_004955465:13,390,856...13,391,994
Ensembl chrNW_004955465:13,391,201...13,391,881
JBrowse link
G Hdac1 histone deacetylase 1 ISO (PMID:12590135)
(PMID:28046085)
BHF-UCL
UniProtKB
PMID:12590135 PMID:28046085 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hdac10 histone deacetylase 10 ISO (PMID:11861901) UniProtKB PMID:11861901 NCBI chrNW_004955413:33,272,600...33,277,893
Ensembl chrNW_004955413:33,272,714...33,277,686
JBrowse link
G Hdac2 histone deacetylase 2 ISO (PMID:28046085) UniProtKB PMID:28046085 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Hdac3 histone deacetylase 3 ISO (PMID:10869435)
(PMID:10869435), (PMID:23867755)
(PMID:12590135)
BHF-UCL PMID:10869435 PMID:12590135 PMID:23867755 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
JBrowse link
G Hdac4 histone deacetylase 4 ISO (PMID:10869435)
(PMID:12590135)
BHF-UCL PMID:10869435 PMID:12590135 NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210
JBrowse link
G Hdac5 histone deacetylase 5 ISO (PMID:23867755) UniProtKB PMID:23867755 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051
JBrowse link
G Hdac6 histone deacetylase 6 ISO (PMID:12620231) UniProtKB PMID:12620231 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
G Hdac9 histone deacetylase 9 ISO (PMID:10655483)
(PMID:12590135)
BHF-UCL PMID:10655483 PMID:12590135 NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO (PMID:12535671) BHF-UCL PMID:12535671 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 ISO (PMID:12535671) BHF-UCL PMID:12535671 NCBI chrNW_004955436:7,060,930...7,070,610
Ensembl chrNW_004955436:7,060,930...7,070,030
JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 ISO (PMID:12052894) UniProtKB PMID:12052894 NCBI chrNW_004955481:1,179,015...1,182,936
Ensembl chrNW_004955481:1,179,015...1,181,825
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:3821919|PMID:19071119) BHF-UCL PMID:19071119 MGI:3821919 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:18413351 RGD:10041067 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Hoxa10 homeobox A10 ISO (PMID:15213244) UniProtKB PMID:15213244 NCBI chrNW_004955410:28,864,785...28,874,454
Ensembl chrNW_004955410:28,864,785...28,874,454
JBrowse link
G Hr HR lysine demethylase and nuclear receptor corepressor ISO Hdac1, Hdac3 and Hdac5 RGD PMID:11641275 RGD:1599577 NCBI chrNW_004955403:45,605,870...45,624,386
Ensembl chrNW_004955403:45,605,510...45,624,402
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:16809764) BHF-UCL PMID:16809764 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16809764) BHF-UCL PMID:16809764 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 ISO (PMID:17646674) UniProt PMID:17646674 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916
JBrowse link
G Insm1 INSM transcriptional repressor 1 ISO (PMID:16569215)
(PMID:16569215), (PMID:18417529)
UniProtKB PMID:16569215 PMID:18417529 NCBI chrNW_004955415:28,396,176...28,398,114 JBrowse link
G Kat2a lysine acetyltransferase 2A ISO (PMID:12887892) UniProtKB PMID:12887892 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO (PMID:12887892) UniProtKB
RGD
PMID:12887892 PMID:24526703 RGD:9590211 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Kctd21 potassium channel tetramerization domain containing 21 ISO (PMID:21472142) UniProtKB PMID:21472142 NCBI chrNW_004955414:13,779,193...13,798,349
Ensembl chrNW_004955414:13,782,671...13,798,349
JBrowse link
G Klf4 Kruppel like factor 4 ISO RGD PMID:19486889 RGD:9590233 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174
JBrowse link
G Kpna2 karyopherin subunit alpha 2 ISO (PMID:10869435) BHF-UCL PMID:10869435 NCBI chrNW_004955478:7,121,432...7,134,327
Ensembl chrNW_004955478:7,121,432...7,134,327
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (PMID:18936100) ParkinsonsUK-UCL PMID:18936100 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G LOC102012090 chromosome unknown open reading frame, human C10orf90 ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chrNW_004955477:4,299,277...4,510,702
Ensembl chrNW_004955477:4,297,588...4,510,959
JBrowse link
G Lpin1 lipin 1 ISO (MGI:4819323|PMID:20385772) MGI PMID:20385772 MGI:4819323 NCBI chrNW_004955487:6,139,188...6,207,316
Ensembl chrNW_004955487:6,138,926...6,210,012
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (PMID:20027304) BHF-UCL PMID:20027304 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:23671328 PMID:24441681 RGD:9590112 RGD:9590255 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Mef2a myocyte enhancer factor 2A ISO (PMID:20590529)
(PMID:10748098)
UniProtKB PMID:10748098 PMID:20590529 NCBI chrNW_004955416:26,926,753...27,051,171
Ensembl chrNW_004955416:26,953,798...27,051,171
JBrowse link
G Mef2b myocyte enhancer factor 2B ISO (PMID:15567413)
(MGI:3699018|PMID:17158926)
BHF-UCL
MGI
PMID:15567413 PMID:17158926 MGI:3699018 NCBI chrNW_004955524:2,649,413...2,664,173
Ensembl chrNW_004955524:2,661,278...2,664,084
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:4359371|PMID:10983972) BHF-UCL PMID:10983972 MGI:4359371 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mef2d myocyte enhancer factor 2D ISO (PMID:20590529)
(MGI:3699018|PMID:17158926)
UniProtKB
MGI
PMID:17158926 PMID:20590529 MGI:3699018 NCBI chrNW_004955545:2,569,399...2,602,580
Ensembl chrNW_004955545:2,569,399...2,602,579
JBrowse link
G Mier1 MIER1 transcriptional regulator ISO (PMID:28046085) UniProtKB PMID:28046085 NCBI chrNW_004955423:23,973,062...24,027,961
Ensembl chrNW_004955423:23,975,616...24,024,086
JBrowse link
G Mier2 MIER family member 2 ISO (PMID:28046085) UniProtKB PMID:28046085 NCBI chrNW_004955495:7,279,507...7,300,202
Ensembl chrNW_004955495:7,279,451...7,302,123
JBrowse link
G Mta2 metastasis associated 1 family member 2 ISO RGD PMID:18413351 RGD:10041067 NCBI chrNW_004955599:587,369...595,582
Ensembl chrNW_004955599:587,425...595,060
JBrowse link
G Myocd myocardin ISO (MGI:3525929|PMID:15601857) MGI PMID:15601857 MGI:3525929 NCBI chrNW_004955467:4,653,065...4,743,438
Ensembl chrNW_004955467:4,656,380...4,743,110
JBrowse link
G Nacc2 NACC family member 2 ISO (PMID:22926524) BHF-UCL PMID:22926524 NCBI chrNW_004955513:4,560,903...4,595,081
Ensembl chrNW_004955513:4,561,643...4,595,364
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (PMID:11804585) BHF-UCL PMID:11804585 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO (PMID:11804585)
(PMID:16924111)
BHF-UCL
UniProtKB
PMID:11804585 PMID:16924111 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
G Nipbl NIPBL cohesin loading factor ISO (PMID:18854353) BHF-UCL PMID:18854353 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515
JBrowse link
G Nkx2-5 NK2 homeobox 5 ISO RGD PMID:19638401 RGD:9590153 NCBI chrNW_004955408:25,833,649...25,836,673
Ensembl chrNW_004955408:25,832,683...25,836,840
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO (PMID:18974119) UniProtKB PMID:18974119 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310
JBrowse link
G Nr2c1 nuclear receptor subfamily 2 group C member 1 ISO (MGI:3688049|PMID:11463856) UniProt PMID:11463856 MGI:3688049 NCBI chrNW_004955405:31,637,832...31,693,621
Ensembl chrNW_004955405:31,635,113...31,691,465
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:4461095|PMID:20123967) BHF-UCL PMID:20123967 MGI:4461095 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO (MGI:3687823|PMID:11006275) UniProt PMID:11006275 MGI:3687823 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
G Nudt21 nudix hydrolase 21 ISO (PMID:17172643) UniProtKB PMID:17172643 NCBI chrNW_004955433:14,220,356...14,234,423
Ensembl chrNW_004955433:14,216,974...14,234,611
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:19470756 RGD:8553699 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Per2 period circadian regulator 2 ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Phb prohibitin ISO (PMID:16964284) BHF-UCL PMID:16964284 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Phf6 PHD finger protein 6 ISO (PMID:22720776) UniProtKB PMID:22720776 NCBI chrNW_004955473:527,005...586,589 JBrowse link
G Pkn1 protein kinase N1 ISO (PMID:20188095) UniProtKB PMID:20188095 NCBI chrNW_004955415:33,040,868...33,062,753
Ensembl chrNW_004955415:33,043,918...33,063,567
JBrowse link
G Pkn2 protein kinase N2 ISO (PMID:20188095) UniProtKB PMID:20188095 NCBI chrNW_004955423:5,467,017...5,575,435
Ensembl chrNW_004955423:5,467,017...5,575,620
JBrowse link
G Prdm1 PR/SET domain 1 ISO (MGI:3826899|PMID:18845144) MGI PMID:18845144 MGI:3826899 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:21753002) ParkinsonsUK-UCL PMID:21753002 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:22679019 RGD:9590167 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Rad9a RAD9 checkpoint clamp component A ISO (PMID:10846170) UniProtKB PMID:10846170 NCBI chrNW_004955422:18,079,634...18,146,122
Ensembl chrNW_004955422:18,079,652...18,085,548
JBrowse link
G Rara retinoic acid receptor alpha ISO RGD PMID:21383775 RGD:9590238 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:17827154) BHF-UCL PMID:17827154 NCBI chrNW_004955452:10,955,399...10,975,036 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:17785205) UniProtKB PMID:17785205 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Rfxank regulatory factor X associated ankyrin containing protein ISO (MGI:3619886|PMID:16236793) MGI PMID:16236793 MGI:3619886 NCBI chrNW_004955524:2,635,358...2,642,206
Ensembl chrNW_004955524:2,635,358...2,641,765
JBrowse link
G Runx2 RUNX family transcription factor 2 ISO RGD PMID:20097749 PMID:25019367 RGD:13208813 RGD:9681006 NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560
JBrowse link
G Satb2 SATB homeobox 2 ISO PMID:18255031 ARUK-UCL PMID:18255031 RGD:39458013 NCBI chrNW_004955403:1,663,676...1,811,088
Ensembl chrNW_004955403:1,663,676...1,811,109
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Sik1 salt inducible kinase 1 ISO (MGI:3712602|PMID:17468767) UniProt PMID:17468767 MGI:3712602 NCBI chrNW_004955407:38,739,062...38,749,293 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:12620231) UniProtKB PMID:12620231 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:3718714|PMID:17666527) UniProt PMID:17666527 MGI:3718714 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 ISO (MGI:5300220|PMID:21937600) MGI PMID:21937600 MGI:5300220 NCBI chrNW_004955402:32,577,189...32,618,611
Ensembl chrNW_004955402:32,582,575...32,618,436
JBrowse link
G Smg5 SMG5 nonsense mediated mRNA decay factor ISO (PMID:16809764) BHF-UCL PMID:16809764 NCBI chrNW_004955545:2,386,877...2,418,418
Ensembl chrNW_004955545:2,386,877...2,418,418
JBrowse link
G Sp1 Sp1 transcription factor ISO (PMID:18850004)
(PMID:17827154)
BHF-UCL PMID:17827154 PMID:18850004 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Sp2 Sp2 transcription factor ISO (PMID:17827154) BHF-UCL PMID:17827154 NCBI chrNW_004955451:13,205,463...13,231,181
Ensembl chrNW_004955451:13,205,463...13,227,775
JBrowse link
G Srf serum response factor ISO RGD PMID:12663674 RGD:9681440 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component ISO (MGI:2670031|PMID:11909966) UniProt PMID:11909966 MGI:2670031 NCBI chrNW_004955455:12,981,899...13,017,194
Ensembl chrNW_004955455:12,981,194...13,017,194
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO (PMID:19497860) BHF-UCL PMID:19497860 NCBI chrNW_004955464:11,304,611...11,317,420
Ensembl chrNW_004955464:11,310,628...11,315,924
JBrowse link
G Tcf21 transcription factor 21 ISO (MGI:3588448|PMID:15919722) BHF-UCL PMID:15919722 MGI:3588448 NCBI chrNW_004955439:2,617,562...2,620,613
Ensembl chrNW_004955439:2,617,492...2,620,644
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:16924111)
(MGI:3663964|PMID:16924111)
(PMID:16540471)
UniProtKB
UniProt
PMID:16540471 PMID:16924111 MGI:3663964 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Thap7 THAP domain containing 7 ISO (PMID:15561719) ARUK-UCL PMID:15561719 NCBI chrNW_004955442:19,311,307...19,313,779
Ensembl chrNW_004955442:19,311,574...19,313,779
JBrowse link
G Top2a DNA topoisomerase II alpha ISO (PMID:11062478), (PMID:11136718) UniProtKB PMID:11062478 PMID:11136718 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Top2b DNA topoisomerase II beta ISO (PMID:11062478)
(PMID:11062478), (PMID:11136718)
UniProtKB PMID:11062478 PMID:11136718 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:23629966) CAFA PMID:23629966 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:18093978) UniProtKB PMID:18093978 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100
JBrowse link
G Uhrf1bp1 UHRF1 binding protein 1 ISO (PMID:15361834) BHF-UCL PMID:15361834 NCBI chrNW_004955437:2,844,544...2,905,073
Ensembl chrNW_004955437:2,875,835...2,904,114
JBrowse link
G Usf1 upstream transcription factor 1 ISO (PMID:19303849) BHF-UCL PMID:19303849 NCBI chrNW_004955468:12,814,810...12,821,383
Ensembl chrNW_004955468:12,814,810...12,821,383
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 ISO (MGI:3770497|PMID:17767906) MGI PMID:17767906 MGI:3770497 NCBI chrNW_004955452:6,519,628...6,581,333
Ensembl chrNW_004955452:6,519,629...6,581,333
JBrowse link
G Xbp1 X-box binding protein 1 ISO (MGI:5616311|PMID:20408817)
(MGI:5607229|PMID:20955178)
ParkinsonsUK-UCL
UniProt
PMID:20408817 PMID:20955178 MGI:5607229 MGI:5616311 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta ISO (PMID:10869435) BHF-UCL PMID:10869435 NCBI chrNW_004955445:12,451,644...12,474,251
Ensembl chrNW_004955445:12,448,760...12,474,251
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon ISO (PMID:10869435) BHF-UCL PMID:10869435 NCBI chrNW_004955481:1,752,778...1,805,700
Ensembl chrNW_004955481:1,752,778...1,808,583
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B ISO (MGI:5446998|PMID:22730529) UniProt PMID:22730529 MGI:5446998 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003
JBrowse link
G Zmynd15 zinc finger MYND-type containing 15 ISO (MGI:4849621|PMID:20675388) MGI PMID:20675388 MGI:4849621 NCBI chrNW_004955467:10,136,635...10,143,016
Ensembl chrNW_004955467:10,136,650...10,143,652
JBrowse link
G Znhit1 zinc finger HIT-type containing 1 ISO (MGI:3851280|PMID:19501046) MGI PMID:19501046 MGI:3851280 NCBI chrNW_004955456:16,070,622...16,082,286
Ensembl chrNW_004955456:16,070,622...16,082,286
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 13908
    binding 13195
      protein binding 12800
        enzyme binding 1884
          histone deacetylase binding 116
paths to the root