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ONTOLOGY REPORT - ANNOTATIONS


Term:peptidoglycan binding
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Accession:GO:0042834 term browser browse the term
Definition:Interacting selectively and non-covalently, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls.


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peptidoglycan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC115202.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:109,473,143...109,475,567 JBrowse link
G Hk1 hexokinase 1 ISO
IEA
(PMID:27374331)
GO_REF:0000107
(MGI:MGI:5790524|PMID:27374331)
RGD
Ensembl
PMID:27374331 GO_REF:0000107, MGI:MGI:5790524 NCBI chr20:31,911,460...31,979,780
Ensembl chr20:31,912,262...31,956,649
JBrowse link
G Ighe immunoglobulin heavy constant epsilon IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighm immunoglobulin heavy constant mu IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Jchain joining chain of multimeric IgA and IgM contributes_to ISO (PMID:21786026) RGD PMID:21786026 NCBI chr14:21,176,841...21,183,731
Ensembl chr14:21,177,237...21,183,542
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:15998797) RGD PMID:15998797 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:11461926), (PMID:16354652), (PMID:17502600)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11461926, PMID:16354652, PMID:17502600, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:79,790,879...79,796,064
Ensembl chr 1:79,790,705...79,796,111
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO
IBA
(PMID:11461926)
PMID:21873635
RGD PMID:11461926, PMID:21873635 RGD:13792537 NCBI chr 7:14,426,481...14,435,987
Ensembl chr 7:14,429,701...14,435,967
JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 ISO (PMID:11461926), (PMID:16354652), (PMID:17502600) RGD PMID:11461926, PMID:16354652, PMID:17502600 NCBI chr 2:191,903,626...192,264,872
Ensembl chr 2:192,253,629...192,264,840
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 ISO (PMID:11461926), (PMID:16354652), (PMID:17502600) RGD PMID:11461926, PMID:16354652, PMID:17502600 NCBI chr 2:190,125,655...190,204,230
Ensembl chr 2:190,125,693...190,148,265
JBrowse link
G Reg1a regenerating family member 1 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,497,962...109,500,626
Ensembl chr 4:109,497,962...109,501,082
JBrowse link
G Reg3a regenerating islet-derived 3 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,477,893...109,480,659
Ensembl chr 4:109,477,920...109,480,659
JBrowse link
G Reg3b regenerating family member 3 beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,467,272...109,470,510
Ensembl chr 4:109,467,272...109,470,510
JBrowse link
G Reg3g regenerating family member 3 gamma ISO
IBA
(PMID:16931762)
PMID:21873635
(MGI:MGI:5897756|PMID:16931762)
RGD PMID:16931762, PMID:21873635 MGI:MGI:5897756, RGD:13792537 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
G Tlr2 toll-like receptor 2 ISO (PMID:11986301) RGD PMID:11986301 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Zg16 zymogen granule protein 16 ISO (MGI:MGI:5824939|PMID:27849619) RGD PMID:27849619 MGI:MGI:5824939 NCBI chr 1:198,483,800...198,486,157
Ensembl chr 1:198,483,805...198,486,157
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  molecular_function 20467
    binding 17270
      carbohydrate derivative binding 2245
        glycosaminoglycan binding 229
          peptidoglycan binding 17
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.