ONTOLOGY REPORT - ANNOTATIONS


Term:extracellular structure organization
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Accession:GO:0043062 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms:exact_synonym: extracellular structure organisation;   extracellular structure organization and biogenesis


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basement membrane assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamb1 laminin subunit beta 1 JBrowse link 6 50,528,796 50,596,593 RGD:13792537
G Lamb2 laminin subunit beta 2 JBrowse link 8 117,268,335 117,280,517 RGD:13792537
G Lamb3 laminin subunit beta 3 JBrowse link 13 112,031,614 112,073,187 RGD:13792537
G Ntn4 netrin 4 JBrowse link 7 34,533,543 34,649,330 RGD:13792537
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 JBrowse link 12 22,716,421 22,726,982 RGD:1624291
RGD:1600115
G Ramp2 receptor activity modifying protein 2 JBrowse link 10 89,166,170 89,168,962 RGD:1624291
RGD:1600115
basement membrane disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cma1 chymase 1 JBrowse link 15 34,601,037 34,603,819 RGD:1624291
RGD:1600115
G Ctss cathepsin S JBrowse link 2 197,655,780 197,679,768 RGD:1624291
RGD:1600115
G Hpn hepsin JBrowse link 1 89,534,112 89,549,575 RGD:1600115
RGD:1624291
basement membrane organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col4a1 collagen type IV alpha 1 chain JBrowse link 16 83,522,162 83,632,153 RGD:1624291
RGD:1600115
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:1624291
RGD:1600115
G Fermt1 fermitin family member 1 JBrowse link 3 125,566,744 125,607,864 RGD:1624291
RGD:1600115
G Flrt2 fibronectin leucine rich transmembrane protein 2 JBrowse link 6 119,518,459 119,613,534 RGD:1624291
RGD:1600115
G Fshr follicle stimulating hormone receptor JBrowse link 6 12,796,383 12,997,817 RGD:1624291
RGD:1600115
G Gas2 growth arrest-specific 2 JBrowse link 1 107,234,389 107,363,624 RGD:1624291
RGD:1600115
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1600115
RGD:1624291
G Mmp11 matrix metallopeptidase 11 JBrowse link 20 13,670,051 13,678,834 RGD:1624291
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Ric8a RIC8 guanine nucleotide exchange factor A JBrowse link 1 213,606,599 213,612,905 RGD:1624291
RGD:1600115
G Spint2 serine peptidase inhibitor, Kunitz type, 2 JBrowse link 1 87,199,373 87,221,826 RGD:1624291
RGD:1600115
G Tfap2a transcription factor AP-2 alpha JBrowse link 17 24,653,342 24,670,457 RGD:1624291
chylomicron assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plagl2 PLAG1 like zinc finger 2 JBrowse link 3 148,709,564 148,722,777 RGD:1624291
RGD:1600115
chylomicron remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308767
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1600115
RGD:1624291
collagen fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acan aggrecan JBrowse link 1 140,762,758 140,824,441 RGD:1624291
RGD:1600115
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 JBrowse link 20 30,812,319 30,888,936 RGD:1624291
RGD:1600115
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 JBrowse link 10 36,098,051 36,304,416 RGD:1624291
RGD:1600115
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
RGD:13792537
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Col11a1 collagen type XI alpha 1 chain JBrowse link 2 216,863,423 217,056,523 RGD:1300046
RGD:1624291
G Col11a2 collagen type XI alpha 2 chain JBrowse link 20 3,829,324 3,859,022 RGD:1624291
RGD:13792537
G Col14a1 collagen type XIV alpha 1 chain JBrowse link 7 95,054,877 95,274,073 RGD:1624291
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:1624291
RGD:1600115
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:1624291
G Col2a1 collagen type II alpha 1 chain JBrowse link 7 139,454,945 139,484,403 RGD:1624291
RGD:13792537
RGD:1600115
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:1624291
RGD:1600115
G Col4a3 collagen type IV alpha 3 chain JBrowse link 9 88,357,528 88,484,735 RGD:13792537
G Col5a1 collagen type V alpha 1 chain JBrowse link 3 6,430,180 6,581,010 RGD:1600115
RGD:13792537
RGD:1624291
G Col5a2 collagen type V alpha 2 chain JBrowse link 9 52,091,088 52,238,735 RGD:1624291
RGD:13792537
G Col5a3 collagen type V alpha 3 chain JBrowse link 8 21,786,324 21,831,751 RGD:13792537
G Comp cartilage oligomeric matrix protein JBrowse link 16 20,798,437 20,807,070 RGD:1624291
RGD:1600115
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:1600115
RGD:1624291
G Ddr2 discoidin domain receptor tyrosine kinase 2 JBrowse link 13 88,311,639 88,436,561 RGD:1624291
RGD:1600115
G Dpt dermatopontin JBrowse link 13 83,073,307 83,102,404 RGD:1624291
RGD:13792537
G Fmod fibromodulin JBrowse link 13 50,874,886 50,885,503 RGD:1600115
G Foxc1 forkhead box C1 JBrowse link 17 33,947,501 33,951,484 RGD:1624291
RGD:1600115
G Foxc2 forkhead box C2 JBrowse link 19 53,044,379 53,047,081 RGD:1624291
RGD:1600115
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:1624291
RGD:1600115
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link 3 12,608,748 12,686,937 RGD:1624291
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:1600668
RGD:1624291
RGD:1600669
G Loxl2 lysyl oxidase-like 2 JBrowse link 15 51,276,022 51,365,238 RGD:1600115
RGD:13792537
RGD:1624291
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:13792537
G Loxl4 lysyl oxidase-like 4 JBrowse link 1 261,833,365 261,853,599 RGD:13792537
G Lum lumican JBrowse link 7 38,820,058 38,826,862 RGD:1600115
G Mia3 MIA SH3 domain ER export factor 3 JBrowse link 13 101,727,434 101,770,127 RGD:1624291
G Mkx mohawk homeobox JBrowse link 17 60,537,615 60,553,284 RGD:1624291
G Mmp11 matrix metallopeptidase 11 JBrowse link 20 13,670,051 13,678,834 RGD:1624291
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G P3h1 prolyl 3-hydroxylase 1 JBrowse link 5 138,279,597 138,294,280 RGD:1624291
G P3h4 prolyl 3-hydroxylase family member 4 (non-enzymatic) JBrowse link 10 88,318,231 88,325,326 RGD:1624291
RGD:1600115
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 JBrowse link 20 28,920,616 28,972,576 RGD:1624291
RGD:1600115
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 JBrowse link 5 164,720,629 164,747,071 RGD:13792537
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 JBrowse link 8 99,977,334 100,059,736 RGD:13792537
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 JBrowse link 12 22,716,421 22,726,982 RGD:1624291
RGD:13792537
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
RGD:1600115
G Serpinf2 serpin family F member 2 JBrowse link 10 62,264,247 62,272,353 RGD:1624291
G Serpinh1 serpin family H member 1 JBrowse link 1 164,301,010 164,308,306 RGD:1600115
RGD:13792537
RGD:1624291
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 2 182,723,732 182,731,277 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
RGD:1600115
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:1624291
G Tnxb tenascin XB RGD:1624291
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link 6 111,271,283 111,296,013 RGD:1624291
RGD:1600115
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
RGD:1600115
elastic fiber assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Efemp2 EGF containing fibulin extracellular matrix protein 2 JBrowse link 1 220,853,695 220,861,420 RGD:1600115
RGD:1624291
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:731206
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1600115
RGD:1624291
G Fbln5 fibulin 5 JBrowse link 6 125,644,797 125,723,957 RGD:1624291
RGD:13792537
RGD:1600115
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:1600669
RGD:1624291
G Mfap4 microfibril associated protein 4 JBrowse link 10 47,765,463 47,768,484 RGD:1624291
G Myh11 myosin heavy chain 11 JBrowse link 10 764,421 859,184 RGD:1600115
RGD:1624291
G Thsd4 thrombospondin type 1 domain containing 4 JBrowse link 8 64,811,940 65,413,498 RGD:1624291
G Tnxb tenascin XB RGD:1624291
extracellular exosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd34 CD34 molecule JBrowse link 13 113,691,842 113,711,259 RGD:1624291
RGD:1600115
extracellular matrix assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:1624291
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:8554638
G Gpm6b glycoprotein m6b JBrowse link X 29,604,607 29,751,174 RGD:1600115
RGD:1624291
G Hapln2 hyaluronan and proteoglycan link protein 2 JBrowse link 2 187,395,104 187,402,076 RGD:1624291
RGD:1600115
G Has1 hyaluronan synthase 1 JBrowse link 1 59,720,612 59,732,409 RGD:1624291
RGD:13792537
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:1624291
RGD:13792537
RGD:1600115
G Has3 hyaluronan synthase 3 JBrowse link 19 39,063,298 39,077,745 RGD:1624291
RGD:13792537
G Qsox1 quiescin sulfhydryl oxidase 1 JBrowse link 13 73,423,396 73,460,890 RGD:1600115
RGD:1624291
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
extracellular matrix constituent secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:2314619
G Creb3l1 cAMP responsive element binding protein 3-like 1 JBrowse link 3 80,892,433 80,933,283 RGD:1624291
RGD:1600115
G Eng endoglin JBrowse link 3 11,679,530 11,717,486 RGD:1601032
G Tmem38b transmembrane protein 38B JBrowse link 5 70,639,156 70,675,055 RGD:1624291
RGD:1600115
extracellular matrix disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capg capping actin protein, gelsolin like JBrowse link 4 100,395,693 100,419,447 RGD:1624291
G Cma1 chymase 1 JBrowse link 15 34,601,037 34,603,819 RGD:1624291
RGD:1600115
G Eng endoglin JBrowse link 3 11,679,530 11,717,486 RGD:1624291
G Exoc8 exocyst complex component 8 JBrowse link 19 57,647,305 57,649,794 RGD:1624291
RGD:1600115
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:1624291
RGD:1600115
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
G Kif9 kinesin family member 9 JBrowse link 8 118,737,739 118,795,190 RGD:1624291
RGD:1600115
G Klk4 kallikrein-related peptidase 4 JBrowse link 1 99,828,944 99,834,642 RGD:1624291
RGD:13792537
G Lamc1 laminin subunit gamma 1 JBrowse link 13 70,656,727 70,783,515 RGD:1624291
RGD:1600115
G Lcp1 lymphocyte cytosolic protein 1 JBrowse link 15 57,170,566 57,277,811 RGD:1624291
RGD:1600115
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:1600115
RGD:13792537
RGD:1624291
G Mmp20 matrix metallopeptidase 20 JBrowse link 8 5,823,147 5,875,555 RGD:1624291
RGD:1600115
G Noxo1 NADPH oxidase organizer 1 JBrowse link 10 14,062,331 14,066,918 RGD:1624291
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:1624291
G Sh3pxd2b SH3 and PX domains 2B JBrowse link 10 17,209,152 17,296,449 RGD:1624291
RGD:1600115
G Tpsab1 tryptase alpha/beta 1 JBrowse link 10 14,701,253 14,703,668 RGD:1624291
G Washc1 WASH complex subunit 1 JBrowse link 9 113,918,914 113,936,861 RGD:1624291
extracellular matrix organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi3bp ABI family member 3 binding protein JBrowse link 11 46,206,932 46,422,791 RGD:1624291
RGD:1600115
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 JBrowse link 7 135,465,021 135,630,941 RGD:1624291
RGD:1600115
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 JBrowse link 4 124,660,254 124,860,997 RGD:1624291
G Adamtsl2 ADAMTS-like 2 JBrowse link 3 5,624,473 5,654,890 RGD:1624291
RGD:1600115
G Adamtsl4 ADAMTS-like 4 JBrowse link 2 197,803,572 197,815,058 RGD:1624291
RGD:1600115
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
G Apbb1 amyloid beta precursor protein binding family B member 1 JBrowse link 1 170,387,625 170,411,263 RGD:1624291
G Apbb2 amyloid beta precursor protein binding family B member 2 JBrowse link 14 43,205,047 43,526,968 RGD:1624291
G Aplp1 amyloid beta precursor like protein 1 JBrowse link 1 88,897,525 88,908,750 RGD:1624291
G Aplp2 amyloid beta precursor like protein 2 JBrowse link 8 32,298,526 32,328,821 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
RGD:1600115
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Atxn1l ataxin 1-like JBrowse link 19 41,932,356 41,939,456 RGD:1624291
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1600115
RGD:1624291
G Bcl3 BCL3, transcription coactivator JBrowse link 1 80,730,758 80,745,273 RGD:1624291
G Ccdc80 coiled-coil domain containing 80 JBrowse link 11 60,645,660 60,679,249 RGD:1624291
RGD:1600115
G Ccn1 cellular communication network factor 1 JBrowse link 2 251,529,354 251,532,312 RGD:1624291
RGD:1600115
G Col10a1 collagen type X alpha 1 chain JBrowse link 20 41,180,295 41,190,664 RGD:13792537
G Col11a1 collagen type XI alpha 1 chain JBrowse link 2 216,863,423 217,056,523 RGD:13792537
G Col11a2 collagen type XI alpha 2 chain JBrowse link 20 3,829,324 3,859,022 RGD:13792537
G Col13a1 collagen type XIII alpha 1 chain JBrowse link 20 31,456,502 31,598,360 RGD:13792537
G Col15a1 collagen type XV alpha 1 chain JBrowse link 5 62,840,360 62,950,240 RGD:13792537
G Col16a1 collagen type XVI alpha 1 chain JBrowse link 5 148,257,030 148,311,645 RGD:13792537
G Col17a1 collagen type XVII alpha 1 chain JBrowse link 1 267,416,681 267,465,049 RGD:13792537
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link 20 12,225,202 12,332,858 RGD:1624291
RGD:13792537
G Col19a1 collagen type XIX alpha 1 chain JBrowse link 9 30,508,003 30,864,836 RGD:1624291
RGD:13792537
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:13792537
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:13792537
G Col22a1 collagen type XXII alpha 1 chain JBrowse link 7 113,014,896 113,251,165 RGD:13792537
G Col23a1 collagen type XXIII alpha 1 chain JBrowse link 10 34,846,618 34,934,991 RGD:13792537
G Col24a1 collagen type XXIV alpha 1 chain JBrowse link 2 251,200,686 251,436,254 RGD:13792537
G Col25a1 collagen type XXV alpha 1 chain JBrowse link 2 235,515,364 235,705,448 RGD:13792537
G Col27a1 collagen type XXVII alpha 1 chain JBrowse link 5 79,054,004 79,172,442 RGD:1624291
RGD:13792537
G Col28a1 collagen type XXVIII alpha 1 chain JBrowse link 4 34,048,074 34,198,558 RGD:13792537
G Col2a1 collagen type II alpha 1 chain JBrowse link 7 139,454,945 139,484,403 RGD:13792537
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:13792537
G Col4a1 collagen type IV alpha 1 chain JBrowse link 16 83,522,162 83,632,153 RGD:13792537
G Col4a2 collagen type IV alpha 2 chain JBrowse link 16 83,386,388 83,522,169 RGD:13792537
G Col4a3 collagen type IV alpha 3 chain JBrowse link 9 88,357,528 88,484,735 RGD:13792537
G Col4a4 collagen type IV alpha 4 chain JBrowse link 9 88,314,763 88,357,183 RGD:13792537
G Col4a5 collagen type IV alpha 5 chain JBrowse link X 112,769,595 112,983,720 RGD:13792537
G Col4a6 collagen type IV alpha 6 chain JBrowse link X 112,405,647 112,768,337 RGD:1624291
RGD:13792537
G Col5a1 collagen type V alpha 1 chain JBrowse link 3 6,430,180 6,581,010 RGD:13792537
G Col5a2 collagen type V alpha 2 chain JBrowse link 9 52,091,088 52,238,735 RGD:13792537
G Col5a3 collagen type V alpha 3 chain JBrowse link 8 21,786,324 21,831,751 RGD:13792537
G Col6a1 collagen type VI alpha 1 chain JBrowse link 20 12,657,913 12,676,370 RGD:13792537
G Col8a1 collagen type VIII alpha 1 chain JBrowse link 11 44,877,690 45,006,203 RGD:13792537
G Col8a2 collagen type VIII alpha 2 chain JBrowse link 5 144,308,527 144,335,142 RGD:13792537
G Col9a1 collagen type IX alpha 1 chain JBrowse link 9 30,419,001 30,502,307 RGD:13792537
G Col9a2 collagen type IX alpha 2 chain JBrowse link 5 139,962,684 139,979,865 RGD:13792537
G Col9a3 collagen type IX alpha 3 chain JBrowse link 3 176,102,287 176,124,839 RGD:13792537
G Colq collagen like tail subunit of asymmetric acetylcholinesterase JBrowse link 16 7,626,380 7,681,621 RGD:13792537
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 JBrowse link 19 52,647,038 52,705,118 RGD:1624291
RGD:1600115
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 JBrowse link 16 22,704,318 23,075,071 RGD:1624291
RGD:1600115
G Dmp1 dentin matrix acidic phosphoprotein 1 JBrowse link 14 6,889,851 6,923,961 RGD:1624291
RGD:1600115
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 JBrowse link 4 2,711,329 2,774,969 RGD:1624291
RGD:1600115
G Ecm2 extracellular matrix protein 2 JBrowse link 17 15,533,760 15,566,403 RGD:1624291
G Egfl6 EGF-like-domain, multiple 6 JBrowse link X 29,430,789 29,488,737 RGD:1624291
RGD:1600115
G Egflam EGF-like, fibronectin type III and laminin G domains JBrowse link 2 56,503,002 56,681,334 RGD:1624291
RGD:1600115
G Elf3 E74 like ETS transcription factor 3 JBrowse link 13 52,083,873 52,088,798 RGD:1624291
RGD:1600115
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:1624291
RGD:1600115
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1624291
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 1 80,293,574 80,307,334 RGD:1624291
RGD:1600115
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha JBrowse link 15 19,619,947 19,655,381 RGD:1624291
RGD:1600115
G Ero1b endoplasmic reticulum oxidoreductase 1 beta JBrowse link 17 90,709,394 90,783,110 RGD:1624291
RGD:1600115
G Fbln1 fibulin 1 JBrowse link 7 126,096,793 126,176,468 RGD:1624291
RGD:13792537
G Fbln2 fibulin 2 JBrowse link 4 122,835,237 122,895,127 RGD:1600115
G Fbln5 fibulin 5 JBrowse link 6 125,644,797 125,723,957 RGD:1624291
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1358623
G Foxf1 forkhead box F1 JBrowse link 19 53,012,306 53,016,100 RGD:1624291
RGD:1600115
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:1624291
RGD:1600115
G Gfod2 glucose-fructose oxidoreductase domain containing 2 JBrowse link 19 37,678,488 37,725,623 RGD:1624291
RGD:13792537
G Hpse2 heparanase 2 (inactive) JBrowse link 1 262,020,903 263,138,299 RGD:1624291
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 JBrowse link 3 82,924,699 83,048,465 RGD:1624291
RGD:1600115
G Hspg2 heparan sulfate proteoglycan 2 JBrowse link 5 155,812,096 155,913,751 RGD:1624291
G Ibsp integrin-binding sialoprotein JBrowse link 14 6,801,200 6,813,987 RGD:1624291
RGD:1600115
G Idua iduronidase, alpha-L- JBrowse link 14 2,041,828 2,056,762 RGD:1624291
G Itga8 integrin subunit alpha 8 JBrowse link 17 79,321,893 79,676,927 RGD:1624291
RGD:1600115
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 JBrowse link 16 7,012,376 7,026,542 RGD:1624291
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 JBrowse link 1 264,827,739 264,831,152 RGD:1624291
RGD:1600115
G Lgals3 galectin 3 JBrowse link 15 24,153,602 24,165,537 RGD:1624291
G LOC100910978 extracellular matrix protein 2-like JBrowse link 17 14,695,293 14,719,087 RGD:13792537
G LOC103693323 collagen alpha-1(XXIII) chain JBrowse link 10 36,741,139 37,031,200 RGD:13792537
G LOC103694864 matrix metalloproteinase-28-like RGD:13792537
G LOC103694874 stromelysin-3 RGD:13792537
G Mia MIA SH3 domain containing JBrowse link 1 83,991,577 83,993,270 RGD:1624291
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:13792537
G Mmp10 matrix metallopeptidase 10 JBrowse link 8 5,734,348 5,742,243 RGD:13792537
G Mmp11 matrix metallopeptidase 11 JBrowse link 20 13,670,051 13,678,834 RGD:1624291
RGD:13792537
G Mmp12 matrix metallopeptidase 12 JBrowse link 8 5,594,717 5,616,494 RGD:13792537
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:13792537
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:13792537
G Mmp15 matrix metallopeptidase 15 JBrowse link 19 10,079,881 10,101,380 RGD:13792537
G Mmp16 matrix metallopeptidase 16 JBrowse link 5 31,568,344 31,818,368 RGD:13792537
G Mmp17 matrix metallopeptidase 17 JBrowse link 12
12
30,353,874
30,701,900
30,356,526
30,728,683
RGD:13792537
G Mmp19 matrix metallopeptidase 19 JBrowse link 7 3,216,392 3,224,202 RGD:13792537
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) JBrowse link 8 5,622,657 5,688,762 RGD:13792537
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:13792537
G Mmp20 matrix metallopeptidase 20 JBrowse link 8 5,823,147 5,875,555 RGD:13792537
G Mmp21 matrix metallopeptidase 21 JBrowse link 1 205,745,119 205,750,786 RGD:13792537
G Mmp23 matrix metallopeptidase 23 JBrowse link 5 173,078,811 173,082,834 RGD:13792537
G Mmp24 matrix metallopeptidase 24 JBrowse link 3 151,307,309 151,355,401 RGD:13792537
G Mmp27 matrix metallopeptidase 27 JBrowse link 8 5,790,019 5,799,938 RGD:13792537
G Mmp28 matrix metallopeptidase 28 JBrowse link 10 70,660,691 70,681,672 RGD:13792537
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:13792537
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:13792537
G Mmp8 matrix metallopeptidase 8 JBrowse link 8 5,768,808 5,777,741 RGD:13792537
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:1624291
RGD:13792537
RGD:1600115
G Mpzl3 myelin protein zero-like 3 JBrowse link 8 49,354,257 49,374,444 RGD:1624291
RGD:1600115
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:1624291
RGD:1600115
G Ndnf neuron-derived neurotrophic factor JBrowse link 4 96,528,830 96,565,780 RGD:1624291
G Nepn nephrocan JBrowse link 20 33,527,932 33,543,860 RGD:1600115
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link 1 266,050,634 266,059,277 RGD:1624291
RGD:1600115
G Nid1 nidogen 1 JBrowse link 17 90,553,161 90,627,133 RGD:1624291
G Nox1 NADPH oxidase 1 JBrowse link X 104,909,328 104,932,508 RGD:1624291
RGD:1600115
G Nphp3 nephrocystin 3 JBrowse link 8 112,526,553 112,575,745 RGD:1624291
RGD:1600115
G Npnt nephronectin JBrowse link 2 238,001,767 238,068,886 RGD:1624291
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
RGD:1600115
G Olfml2a olfactomedin-like 2A JBrowse link 3 23,223,468 23,259,318 RGD:1624291
RGD:1600115
G Olfml2b olfactomedin-like 2B JBrowse link 13 88,995,301 89,032,487 RGD:1624291
RGD:1600115
G Otol1 otolin 1 JBrowse link 2 166,845,543 166,866,513 RGD:13792537
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:1624291
RGD:1600115
G Pomt1 protein-O-mannosyltransferase 1 JBrowse link 3 11,253,424 11,271,873 RGD:1624291
RGD:1600115
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:1624291
RGD:13792537
G Prdx4 peroxiredoxin 4 JBrowse link X 43,495,453 43,512,994 RGD:1624291
RGD:1600115
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1624291
RGD:1600115
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
RGD:1600115
G Pxdn peroxidasin JBrowse link 6 48,866,496 48,982,368 RGD:1624291
RGD:1600115
G Reck reversion-inducing-cysteine-rich protein with kazal motifs JBrowse link 5 59,348,568 59,415,169 RGD:1624291
RGD:13792537
G RGD1562885 similar to RIKEN cDNA 2300002M23 JBrowse link 20 3,689,608 3,691,164 RGD:1624291
G Rxfp1 relaxin family peptide receptor 1 JBrowse link 2 178,402,411 178,520,213 RGD:1624291
RGD:1600115
G Scara3 scavenger receptor class A, member 3 JBrowse link 15 42,605,505 42,638,409 RGD:13792537
G Serac1 serine active site containing 1 JBrowse link 1 46,934,499 46,978,264 RGD:1624291
G Serpinb5 serpin family B member 5 JBrowse link 13 26,903,052 26,923,250 RGD:1624291
RGD:1600115
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Smoc1 SPARC related modular calcium binding 1 JBrowse link 6 104,718,403 104,879,611 RGD:1624291
G Smoc2 SPARC related modular calcium binding 2 JBrowse link 1 56,242,289 56,374,106 RGD:1624291
RGD:1600115
G Sox9 SRY box 9 JBrowse link 10 101,288,528 101,294,030 RGD:1624291
RGD:1600115
G Spint1 serine peptidase inhibitor, Kunitz type 1 JBrowse link 3 111,049,132 111,061,991 RGD:1624291
RGD:1600115
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 JBrowse link 20 29,654,926 29,679,927 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
G Tgfbi transforming growth factor, beta induced JBrowse link 17 8,400,123 8,429,338 RGD:1624291
RGD:13792537
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
G Tnfrsf11b TNF receptor superfamily member 11B JBrowse link 7 93,798,580 93,826,586 RGD:1624291
RGD:1600115
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:1600115
RGD:1624291
G Tnxb tenascin XB RGD:1624291
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
RGD:1600115
G Vit vitrin JBrowse link 6 1,091,817 1,208,888 RGD:1624291
RGD:13792537
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:1624291
RGD:1600115
G Vwa1 von Willebrand factor A domain containing 1 JBrowse link 5 173,216,737 173,221,923 RGD:1624291
RGD:1600115
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1624291
RGD:1600115
fibronectin fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:1624291
RGD:1600115
gene expression involved in extracellular matrix organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dspp dentin sialophosphoprotein JBrowse link 14 6,926,972 6,933,079 RGD:1624291
glomerular basement membrane development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col4a3 collagen type IV alpha 3 chain JBrowse link 9 88,357,528 88,484,735 RGD:1624291
RGD:1600115
G Col4a4 collagen type IV alpha 4 chain JBrowse link 9 88,314,763 88,357,183 RGD:1624291
RGD:13792537
G Mpv17 mitochondrial inner membrane protein MPV17 JBrowse link 6 26,585,713 26,600,265 RGD:1624291
G Myo1e myosin IE JBrowse link 8 76,644,715 76,840,240 RGD:1624291
RGD:1600115
G Nid1 nidogen 1 JBrowse link 17 90,553,161 90,627,133 RGD:1624291
RGD:1600115
G Nphs1 NPHS1 adhesion molecule, nephrin JBrowse link 1 88,922,346 88,950,560 RGD:1600115
RGD:1624291
G Sulf1 sulfatase 1 JBrowse link 5 5,999,520 6,186,901 RGD:1600115
RGD:13792537
RGD:1624291
G Sulf2 sulfatase 2 JBrowse link 3 162,791,349 162,872,984 RGD:1624291
RGD:13792537
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:1624291
RGD:1600115
high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1600115
RGD:1624291
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link 7 12,742,433 12,762,423 RGD:1624291
RGD:1600115
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:13792537
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:13792537
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:13792537
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1600115
RGD:1624291
RGD:13792537
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
RGD:13792537
high-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:1624291
RGD:1600115
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:1624291
RGD:1600115
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:1600115
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1624291
RGD:1600115
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
RGD:13792537
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1600115
RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308770
RGD:13792537
RGD:1600115
RGD:1624291
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:1624291
RGD:13792537
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:13792537
G Pltp phospholipid transfer protein JBrowse link 3 161,304,469 161,322,289 RGD:1624291
RGD:1600115
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
intercellular bridge organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tex14 testis expressed 14, intercellular bridge forming factor JBrowse link 10 74,724,070 74,849,172 RGD:1600115
RGD:13792537
RGD:1624291
low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:1624291
RGD:1600115
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:1624291
RGD:1600115
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308769
RGD:1600115
RGD:2308763
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
RGD:1600115
G Pla2g2e phospholipase A2, group IIE JBrowse link 5 157,327,657 157,333,039 RGD:1624291
G Pla2g5 phospholipase A2, group V JBrowse link 5 157,247,601 157,268,968 RGD:1624291
G Pla2g7 phospholipase A2 group VII JBrowse link 9 19,935,754 19,978,013 RGD:1624291
RGD:1600115
metanephric glomerular basement membrane development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamb2 laminin subunit beta 2 JBrowse link 8 117,268,335 117,280,517 RGD:1600115
RGD:1624291
negative regulation of collagen fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chadl chondroadherin-like JBrowse link 7 122,915,847 122,929,127 RGD:1624291
RGD:1600115
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1600115
RGD:1624291
negative regulation of extracellular matrix assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:1624291
RGD:1600115
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adtrp androgen-dependent TFPI-regulating protein JBrowse link 17 22,619,913 22,688,296 RGD:1600115
RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1600115
RGD:1624291
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:1624291
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:1600115
RGD:1624291
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cst3 cystatin C JBrowse link 3 143,219,671 143,223,544 RGD:1624291
RGD:1600115
G Dpp4 dipeptidylpeptidase 4 JBrowse link 3 48,291,055 48,372,672 RGD:1624291
RGD:1600115
G Fap fibroblast activation protein, alpha JBrowse link 3 48,467,781 48,536,242 RGD:1624291
RGD:1600115
negative regulation of extracellular matrix organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fap fibroblast activation protein, alpha JBrowse link 3 48,467,781 48,536,242 RGD:1624291
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:1600115
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
RGD:1600115
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:1624291
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:1600115
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:1600115
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1624291
RGD:1600115
plasma lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mttp microsomal triglyceride transfer protein JBrowse link 2 243,366,181 243,407,608 RGD:1624291
plasma lipoprotein particle oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g7 phospholipase A2 group VII JBrowse link 9 19,935,754 19,978,013 RGD:1624291
RGD:1600115
plasma lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoc1 apolipoprotein C1 JBrowse link 1 80,606,638 80,609,921 RGD:1624291
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clasp1 cytoplasmic linker associated protein 1 JBrowse link 13 34,365,038 34,584,651 RGD:1624291
RGD:1600115
G Clasp2 cytoplasmic linker associated protein 2 JBrowse link 8 122,003,719 122,185,495 RGD:1624291
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:1624291
RGD:1600115
G Phldb1 pleckstrin homology-like domain, family B, member 1 JBrowse link 8 48,997,189 49,045,176 RGD:1600115
RGD:1624291
G Phldb2 pleckstrin homology-like domain, family B, member 2 JBrowse link 11 60,042,879 60,051,229 RGD:1624291
positive regulation of blood microparticle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
positive regulation of collagen fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 JBrowse link 16 20,039,969 20,052,277 RGD:1624291
RGD:1600115
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:1600115
RGD:1624291
positive regulation of extracellular exosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,145 RGD:1624291
G Sdc1 syndecan 1 JBrowse link 6 33,885,576 33,908,038 RGD:1624291
RGD:1600115
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:1624291
RGD:1600115
G Sdcbp syndecan binding protein JBrowse link 5 19,471,664 19,498,499 RGD:1624291
positive regulation of extracellular matrix assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1600115
RGD:1624291
G Rgcc regulator of cell cycle JBrowse link 15 61,551,861 61,564,695 RGD:1624291
RGD:1600115
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:1624291
RGD:1600115
G Sox9 SRY box 9 JBrowse link 10 101,288,528 101,294,030 RGD:1624291
RGD:1600115
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:5129171
G Cpb2 carboxypeptidase B2 JBrowse link 15 57,290,849 57,339,762 RGD:7243115
G Rgcc regulator of cell cycle JBrowse link 15 61,551,861 61,564,695 RGD:1624291
RGD:1600115
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carmil2 capping protein regulator and myosin 1 linker 2 JBrowse link 19 37,652,383 37,665,333 RGD:1624291
RGD:1600115
G Clasp1 cytoplasmic linker associated protein 1 JBrowse link 13 34,365,038 34,584,651 RGD:1624291
RGD:1600115
G Clasp2 cytoplasmic linker associated protein 2 JBrowse link 8 122,003,719 122,185,495 RGD:1624291
G Ddr2 discoidin domain receptor tyrosine kinase 2 JBrowse link 13 88,311,639 88,436,561 RGD:1624291
RGD:1600115
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:1624291
RGD:1600115
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:1624291
G Meltf melanotransferrin JBrowse link 11 72,135,311 72,158,106 RGD:1624291
RGD:1600115
G Pdpn podoplanin JBrowse link 5 161,947,137 161,981,441 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
positive regulation of extracellular matrix organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:8693597
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:11341715
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:1624291
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1600115
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:1624291
RGD:1600115
positive regulation of hyaluranon cable assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:1624291
RGD:1600115
G Has3 hyaluronan synthase 3 JBrowse link 19 39,063,298 39,077,745 RGD:1624291
RGD:1600115
G Hyal1 hyaluronidase 1 JBrowse link 8 116,332,834 116,337,522 RGD:1600115
RGD:1624291
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1624291
RGD:1600115
regulation of collagen fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aebp1 AE binding protein 1 JBrowse link 14 86,101,253 86,111,323 RGD:1600115
RGD:1624291
regulation of extracellular exosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,145 RGD:1624291
G Stam signal transducing adaptor molecule JBrowse link 17 81,209,795 81,256,111 RGD:1624291
RGD:1600115
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1624291
RGD:1600115
regulation of extracellular matrix assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
RGD:1600115
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:12910548
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
RGD:1600115
regulation of extracellular matrix disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddr1 discoidin domain receptor tyrosine kinase 1 JBrowse link 20 3,553,430 3,574,959 RGD:1600115
RGD:1624291
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link 8 33,756,634 33,879,625 RGD:2313717
G Fgfr4 fibroblast growth factor receptor 4 JBrowse link 17 9,990,072 10,004,339 RGD:1624291
RGD:1600115
regulation of extracellular matrix organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase JBrowse link 13 74,154,533 74,333,244 RGD:1624291
G Ddr1 discoidin domain receptor tyrosine kinase 1 JBrowse link 20 3,553,430 3,574,959 RGD:13792537
G Ddr2 discoidin domain receptor tyrosine kinase 2 JBrowse link 13 88,311,639 88,436,561 RGD:13792537
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Lemd3 LEM domain containing 3 JBrowse link 7 62,976,671 63,045,860 RGD:1624291
G Tcf15 transcription factor 15 JBrowse link 3 147,643,250 147,649,511 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1600115
RGD:1624291
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1624291
RGD:1600115
very-low-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsl3 acyl-CoA synthetase long-chain family member 3 JBrowse link 9 84,569,601 84,593,565 RGD:1624291
RGD:1600115
G Arf1 ADP-ribosylation factor 1 JBrowse link 10 45,562,700 45,579,214 RGD:9684856
G Ces1d carboxylesterase 1D JBrowse link 19 15,195,514 15,239,827 RGD:1624291
RGD:1600115
G Dgat1 diacylglycerol O-acyltransferase 1 JBrowse link 7 117,566,363 117,576,735 RGD:1624291
RGD:1600115
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:1624291
G Soat1 sterol O-acyltransferase 1 JBrowse link 13 74,035,258 74,077,759 RGD:1624291
RGD:1600115
G Soat2 sterol O-acyltransferase 2 JBrowse link 7 143,754,892 143,767,989 RGD:1624291
RGD:1600115
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:13792537
RGD:1600115
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:13792537
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:13792537
RGD:1600115
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1624291
RGD:1600115
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308780
RGD:13792537
RGD:1600115
RGD:1624291
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:13792537
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1624291
RGD:13792537
vitelline membrane formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17926
    cellular component organization or biogenesis 6227
      cellular component organization 6054
        extracellular structure organization 320
          biofilm matrix organization + 0
          blood microparticle formation + 2
          cellulosome assembly + 0
          extracellular exosome assembly + 7
          extracellular matrix organization + 275
          hyaluranon cable assembly + 3
          intercellular bridge organization + 1
          plasma lipoprotein particle organization + 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.