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ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular organelle
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Accession:GO:0043229 term browser browse the term
Definition:Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.


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acrosomal vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arc activity regulated cytoskeleton associated protein JBrowse link NW_004936470 9,185,145 9,188,260 RGD:9068941
actin cytoskeleton term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Arc activity regulated cytoskeleton associated protein JBrowse link NW_004936470 9,185,145 9,188,260 RGD:9068941
G Kiaa0754 KIAA0754 ortholog JBrowse link NW_004936474 21,330,738 21,335,332 RGD:9068941
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
axoneme term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lca5l lebercilin LCA5 like JBrowse link NW_004936500 3,780,622 3,809,924 RGD:9068941
azurophil granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
G Fpr1 formyl peptide receptor 1 JBrowse link NW_004937026 155,550 156,608 RGD:9068941
centriole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Hspa6 heat shock protein family A (Hsp70) member 6 JBrowse link NW_004937131 25,603 28,458 RGD:9068941
centrosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd7 ankyrin repeat domain 7 JBrowse link NW_004936589 1,069,112 1,106,858 RGD:9068941
G B9d2 B9 domain containing 2 JBrowse link NW_004936661 3,759,031 3,765,361 RGD:9068941
G Eef1akmt3 EEF1A lysine methyltransferase 3 JBrowse link NW_004936646 1,908,581 1,917,376 RGD:9068941
G Haus4 HAUS augmin like complex subunit 4 JBrowse link NW_004936722 1,352,070 1,378,497 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
checkpoint clamp complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004936741 1,838,974 1,848,742 RGD:9068941
chromosome, telomeric region term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
ciliary basal body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B9d2 B9 domain containing 2 JBrowse link NW_004936661 3,759,031 3,765,361 RGD:9068941
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
condensed chromosome kinetochore term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
COP9 signalosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Hspa6 heat shock protein family A (Hsp70) member 6 JBrowse link NW_004937131 25,603 28,458 RGD:9068941
COPI vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004936521 8,422,511 8,439,945 RGD:9068941
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
COPII-coated ER to Golgi transport vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004936740 228,377 242,318 RGD:9068941
core-binding factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
cortical endoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stimate STIM activating enhancer JBrowse link NW_004936473 3,595,669 3,647,971 RGD:9068941
cytoplasmic stress granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
cytoplasmic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Resp18 regulated endocrine specific protein 18 JBrowse link NW_004936569 1,731,756 1,737,679 RGD:9068941
cytoplasmic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc26a6 solute carrier family 26 member 6 JBrowse link NW_004936529 425,839 435,590 RGD:9068941
cytoskeleton term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kcnc3 potassium voltage-gated channel subfamily C member 3 JBrowse link NW_004936889 185,349 203,847 RGD:9068941
G Tmsb15b thymosin beta 15B JBrowse link NW_004936499 10,315,198 10,318,382 RGD:9068941
cytosolic large ribosomal subunit term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl26l1 ribosomal protein L26 like 1 JBrowse link NW_004936609 2,557,817 2,563,510 RGD:9068941
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
dynein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tcte3 t-complex-associated-testis-expressed 3 JBrowse link NW_004936489 18,180,621 18,201,739 RGD:9068941
early endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F8a1 coagulation factor VIII associated 1 JBrowse link NW_004936927 234,162 236,881 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Plekhj1 pleckstrin homology domain containing J1 JBrowse link NW_004936588 1,333,103 1,335,023 RGD:9068941
early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arc activity regulated cytoskeleton associated protein JBrowse link NW_004936470 9,185,145 9,188,260 RGD:9068941
endocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
endolysosome lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsl cathepsin L JBrowse link NW_004936680 3,047,355 3,050,640 RGD:9068941
endoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agr3 anterior gradient 3, protein disulphide isomerase family member JBrowse link NW_004936546 3,379,951 3,393,532 RGD:9068941
G Ccdc134 coiled-coil domain containing 134 JBrowse link NW_004936492 180,135 195,599 RGD:9068941
G Get1 guided entry of tail-anchored proteins factor 1 JBrowse link NW_004936500 3,815,200 3,831,693 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Mxra7 matrix remodeling associated 7 JBrowse link NW_004936594 1,734,386 1,747,406 RGD:9068941
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z JBrowse link NW_004936833 902,002 918,321 RGD:9068941
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Resp18 regulated endocrine specific protein 18 JBrowse link NW_004936569 1,731,756 1,737,679 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004936521 8,422,511 8,439,945 RGD:9068941
G Shisa2 shisa family member 2 JBrowse link NW_004936688 278,789 285,129 RGD:9068941
G Slc26a6 solute carrier family 26 member 6 JBrowse link NW_004936529 425,839 435,590 RGD:9068941
G Tcl1a T cell leukemia/lymphoma 1A JBrowse link NW_004936604 127,841 131,056 RGD:9068941
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
G Tmem30b transmembrane protein 30B JBrowse link NW_004936495 5,390,078 5,392,726 RGD:9068941
endoplasmic reticulum exit site term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004936521 8,422,511 8,439,945 RGD:9068941
endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C4a complement C4A (Rodgers blood group) JBrowse link NW_004936727 1,556,204 1,570,084 RGD:9068941
G Ces3 carboxylesterase 3 JBrowse link NW_004936475 17,485,803 17,498,649 RGD:9068941
G Fkbp14 FKBP prolyl isomerase 14 JBrowse link NW_004936478 6,296,598 6,310,405 RGD:9068941
G Serpina10 serpin family A member 10 JBrowse link NW_004936733 2,121,875 2,129,988 RGD:9068941
endoplasmic reticulum-Golgi intermediate compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
endoplasmic reticulum-Golgi intermediate compartment membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
endosome lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101969021 somatotropin JBrowse link NW_004936541 4,524,397 4,528,234 RGD:9068941
endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Plekhm1 pleckstrin homology and RUN domain containing M1 JBrowse link NW_004936541 1,685,902 1,732,361 RGD:9068941
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
epsilon DNA polymerase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
ESCRT II complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
FANCM-MHF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
Fanconi anaemia nuclear complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
G Cort cortistatin JBrowse link NW_004936623 4,287,175 4,289,347 RGD:9068941
fibrillar center term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link NW_004936588 1,445,209 1,446,223 RGD:9068941
ficolin-1-rich granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Hspa6 heat shock protein family A (Hsp70) member 6 JBrowse link NW_004937131 25,603 28,458 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
G Prg2 proteoglycan 2, pro eosinophil major basic protein JBrowse link NW_004936581 5,101,041 5,103,175 RGD:9068941
ficolin-1-rich granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fpr1 formyl peptide receptor 1 JBrowse link NW_004937026 155,550 156,608 RGD:9068941
Golgi apparatus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bend5 BEN domain containing 5 JBrowse link NW_004936474 29,600,130 29,647,142 RGD:9068941
G Itm2a integral membrane protein 2A JBrowse link NW_004936547 1,260,705 1,267,443 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
G Resp18 regulated endocrine specific protein 18 JBrowse link NW_004936569 1,731,756 1,737,679 RGD:9068941
G Sectm1 secreted and transmembrane 1 JBrowse link NW_004936594 5,782,469 5,794,967 RGD:9068941
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
G Tmem30b transmembrane protein 30B JBrowse link NW_004936495 5,390,078 5,392,726 RGD:9068941
Golgi cisterna membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chpf2 chondroitin polymerizing factor 2 JBrowse link NW_004936527 6,637,563 6,643,051 RGD:9068941
Golgi lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Muc17 mucin 17, cell surface associated JBrowse link NW_004936543 976,794 987,062 RGD:9068941
G Muc3a mucin 3A, cell surface associated JBrowse link NW_004936543 886,333 904,504 RGD:9068941
Golgi membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chpf2 chondroitin polymerizing factor 2 JBrowse link NW_004936527 6,637,563 6,643,051 RGD:9068941
G Cog2 component of oligomeric golgi complex 2 JBrowse link NW_004936484 19,723,475 19,756,136 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
G Mmd2 monocyte to macrophage differentiation associated 2 JBrowse link NW_004936765 1,013,959 1,034,736 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Sar1a secretion associated Ras related GTPase 1A JBrowse link NW_004936521 8,422,511 8,439,945 RGD:9068941
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
Golgi stack term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cog2 component of oligomeric golgi complex 2 JBrowse link NW_004936484 19,723,475 19,756,136 RGD:9068941
Golgi transport complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cog2 component of oligomeric golgi complex 2 JBrowse link NW_004936484 19,723,475 19,756,136 RGD:9068941
HAUS complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Haus4 HAUS augmin like complex subunit 4 JBrowse link NW_004936722 1,352,070 1,378,497 RGD:9068941
intracellular membrane-bounded organelle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agr3 anterior gradient 3, protein disulphide isomerase family member JBrowse link NW_004936546 3,379,951 3,393,532 RGD:9068941
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101968601 signal transducer CD24 JBrowse link NW_004936491 16,706,745 16,707,010 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Nmrk2 nicotinamide riboside kinase 2 JBrowse link NW_004936588 2,229,869 2,234,573 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Plekhm1 pleckstrin homology and RUN domain containing M1 JBrowse link NW_004936541 1,685,902 1,732,361 RGD:9068941
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Samd9 sterile alpha motif domain containing 9 JBrowse link NW_004936803 765,839 782,176 RGD:9068941
G Znf232 zinc finger protein 232 JBrowse link NW_004936677 2,640,545 2,645,540 RGD:9068941
kinetochore term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sumo3 small ubiquitin like modifier 3 JBrowse link NW_004936778 1,392,110 1,412,153 RGD:9068941
large ribosomal subunit term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl26l1 ribosomal protein L26 like 1 JBrowse link NW_004936609 2,557,817 2,563,510 RGD:9068941
late endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
lipid droplet term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Faah2 fatty acid amide hydrolase 2 JBrowse link NW_004936980 183,629 319,072 RGD:9068941
lysosomal lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsl cathepsin L JBrowse link NW_004936680 3,047,355 3,050,640 RGD:9068941
lysosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
G Gna11 G protein subunit alpha 11 JBrowse link NW_004936588 1,770,777 1,789,143 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
G Plekhm1 pleckstrin homology and RUN domain containing M1 JBrowse link NW_004936541 1,685,902 1,732,361 RGD:9068941
lysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004936567 1,373,727 1,385,694 RGD:9068941
G Ctsl cathepsin L JBrowse link NW_004936680 3,047,355 3,050,640 RGD:9068941
G Psapl1 prosaposin like 1 JBrowse link NW_004936477 19,100,427 19,102,968 RGD:9068941
melanosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
microprocessor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
microtubule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Haus4 HAUS augmin like complex subunit 4 JBrowse link NW_004936722 1,352,070 1,378,497 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Tcte3 t-complex-associated-testis-expressed 3 JBrowse link NW_004936489 18,180,621 18,201,739 RGD:9068941
microtubule organizing center term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
MIS12/MIND type complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
mitochondrial inner membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a22 solute carrier family 25 member 22 JBrowse link NW_004936888 558,064 565,576 RGD:9068941
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link NW_004936588 1,445,209 1,446,223 RGD:9068941
mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link NW_004936588 1,445,209 1,446,223 RGD:9068941
mitochondrial intermembrane space protein transporter complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link NW_004936588 1,445,209 1,446,223 RGD:9068941
mitochondrial matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm2b acyl-CoA synthetase medium chain family member 2B JBrowse link NW_004936501 5,925,845 5,943,462 RGD:9068941
G Isca1 iron-sulfur cluster assembly 1 JBrowse link NW_004936680 1,673,666 1,689,646 RGD:9068941
G Nadk2 NAD kinase 2, mitochondrial JBrowse link NW_004936518 5,585,911 5,632,961 RGD:9068941
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
G Ptcd1 pentatricopeptide repeat domain 1 JBrowse link NW_004936750 1,684,326 1,699,333 RGD:9068941
mitochondrial outer membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Moap1 modulator of apoptosis 1 JBrowse link NW_004936733 1,111,256 1,113,651 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
mitochondrial pyruvate dehydrogenase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm2b acyl-CoA synthetase medium chain family member 2B JBrowse link NW_004936501 5,925,845 5,943,462 RGD:9068941
G Aim2 absent in melanoma 2 JBrowse link NW_004936740 1,447,869 1,460,836 RGD:9068941
G Dhfr dihydrofolate reductase JBrowse link NW_004936469 67,962 83,116 RGD:9068941
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
G Glyatl1 glycine-N-acyltransferase like 1 JBrowse link NW_004936581 3,514,336 3,522,632 RGD:9068941
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Isca1 iron-sulfur cluster assembly 1 JBrowse link NW_004936680 1,673,666 1,689,646 RGD:9068941
G Moap1 modulator of apoptosis 1 JBrowse link NW_004936733 1,111,256 1,113,651 RGD:9068941
G Nadk2 NAD kinase 2, mitochondrial JBrowse link NW_004936518 5,585,911 5,632,961 RGD:9068941
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 JBrowse link NW_004936706 1,961,571 1,996,637 RGD:9068941
G Page4 PAGE family member 4 JBrowse link NW_004936721 1,347,679 1,350,598 RGD:9068941
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
G Ptcd1 pentatricopeptide repeat domain 1 JBrowse link NW_004936750 1,684,326 1,699,333 RGD:9068941
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link NW_004936588 1,445,209 1,446,223 RGD:9068941
G Tmem186 transmembrane protein 186 JBrowse link NW_004936530 7,626,747 7,630,581 RGD:9068941
G Trim31 tripartite motif containing 31 JBrowse link NW_004936723 934,808 945,279 RGD:9068941
mRNA cleavage and polyadenylation specificity factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
multivesicular body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsl cathepsin L JBrowse link NW_004936680 3,047,355 3,050,640 RGD:9068941
nuclear body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G F8a1 coagulation factor VIII associated 1 JBrowse link NW_004936927 234,162 236,881 RGD:9068941
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Scrt1 scratch family transcriptional repressor 1 JBrowse link NW_004936470 7,907,294 7,913,136 RGD:9068941
G Trim31 tripartite motif containing 31 JBrowse link NW_004936723 934,808 945,279 RGD:9068941
nuclear chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Argfx arginine-fifty homeobox JBrowse link NW_004936536 8,025,883 8,040,423 RGD:9068941
G Bhlhe22 basic helix-loop-helix family member e22 JBrowse link NW_004936496 9,085,894 9,087,623 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004936491 16,745,310 16,762,422 RGD:9068941
G Foxd4 forkhead box D4 JBrowse link NW_004936503 4,658,802 4,660,203 RGD:9068941
G Foxq1 forkhead box Q1 JBrowse link NW_004936633 2,458,473 2,460,990 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004936512 11,222,120 11,225,455 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004936509 5,637,600 5,640,335 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Isl2 ISL LIM homeobox 2 JBrowse link NW_004936471 35,840,202 35,845,822 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004936483 477,490 575,143 RGD:9068941
G Leutx leucine twenty homeobox JBrowse link NW_004936661 2,399,154 2,406,044 RGD:9068941
G LOC101974512 histone H2A type 1-B/E JBrowse link NW_004936671 1,892,445 1,893,584 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004936491 16,987,797 16,996,423 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Pou5f2 POU domain class 5, transcription factor 2 JBrowse link NW_004936523 9,360,876 9,363,054 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004936485 17,812,995 17,866,492 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Zbed3 zinc finger BED-type containing 3 JBrowse link NW_004936549 5,124,079 5,136,873 RGD:9068941
nuclear chromosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
nuclear chromosome, telomeric region term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
G Mtmr8 myotubularin related protein 8 JBrowse link NW_004936635 3,336,218 3,415,998 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
G Pom121c POM121 transmembrane nucleoporin C JBrowse link NW_004936543 2,593,928 2,618,244 RGD:9068941
nuclear membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC106145336 zinc finger protein 879 JBrowse link NW_004936739 1,665,595 1,704,963 RGD:9068941
G Pom121c POM121 transmembrane nucleoporin C JBrowse link NW_004936543 2,593,928 2,618,244 RGD:9068941
nuclear MIS12/MIND complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
nuclear nucleosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
nuclear pore term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pom121c POM121 transmembrane nucleoporin C JBrowse link NW_004936543 2,593,928 2,618,244 RGD:9068941
G Pom121l12 POM121 transmembrane nucleoporin like 12 JBrowse link NW_004936678 2,338,317 2,339,195 RGD:9068941
nuclear speck term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
nuclear transcription factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
nucleolus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004936491 16,745,310 16,762,422 RGD:9068941
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
G Plekhm1 pleckstrin homology and RUN domain containing M1 JBrowse link NW_004936541 1,685,902 1,732,361 RGD:9068941
G Pnma3 PNMA family member 3 JBrowse link NW_004936714 90,133 93,805 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Znf501 zinc finger protein 501 JBrowse link NW_004936695 936,421 944,574 RGD:9068941
nucleoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aim2 absent in melanoma 2 JBrowse link NW_004936740 1,447,869 1,460,836 RGD:9068941
G Ankrd7 ankyrin repeat domain 7 JBrowse link NW_004936589 1,069,112 1,106,858 RGD:9068941
G Brat1 BRCA1 associated ATM activator 1 JBrowse link NW_004936823 393,878 404,348 RGD:9068941
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
G Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 JBrowse link NW_004936474 22,514,800 22,516,166 RGD:9068941
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link NW_004936623 3,782,005 3,806,616 RGD:9068941
G CUNH19orf33 chromosome unknown C19orf33 homolog JBrowse link NW_004936801 1,077,823 1,080,317 RGD:9068941
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G Dusp23 dual specificity phosphatase 23 JBrowse link NW_004943943 31 1,797 RGD:9068941
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
G Eef1akmt3 EEF1A lysine methyltransferase 3 JBrowse link NW_004936646 1,908,581 1,917,376 RGD:9068941
G Eid2b EP300 interacting inhibitor of differentiation 2B JBrowse link NW_004936661 2,352,726 2,354,968 RGD:9068941
G Ezhip EZH inhibitory protein JBrowse link NW_004936909 106,077 107,828 RGD:9068941
G Fezf1 FEZ family zinc finger 1 JBrowse link NW_004936605 3,027,138 3,030,442 RGD:9068941
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004936512 11,222,120 11,225,455 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004936509 5,637,600 5,640,335 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Inka2 inka box actin regulator 2 JBrowse link NW_004936690 370,051 386,094 RGD:9068941
G Ipmk inositol polyphosphate multikinase JBrowse link NW_004936614 4,724,935 4,772,373 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Lmo2 LIM domain only 2 JBrowse link NW_004936533 4,107,073 4,117,121 RGD:9068941
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Nmrk2 nicotinamide riboside kinase 2 JBrowse link NW_004936588 2,229,869 2,234,573 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004936741 1,838,974 1,848,742 RGD:9068941
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link NW_004936558 1,297,517 1,302,410 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Sumo3 small ubiquitin like modifier 3 JBrowse link NW_004936778 1,392,110 1,412,153 RGD:9068941
G Tcl1a T cell leukemia/lymphoma 1A JBrowse link NW_004936604 127,841 131,056 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004936519 7,997,824 8,001,614 RGD:9068941
G Znf232 zinc finger protein 232 JBrowse link NW_004936677 2,640,545 2,645,540 RGD:9068941
G Znf501 zinc finger protein 501 JBrowse link NW_004936695 936,421 944,574 RGD:9068941
G Znf594 zinc finger protein 594 JBrowse link NW_004936677 2,612,417 2,628,712 RGD:9068941
nucleosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974512 histone H2A type 1-B/E JBrowse link NW_004936671 1,892,445 1,893,584 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link NW_004936594 2,794,927 2,805,689 RGD:9068941
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Ankrd30a ankyrin repeat domain 30A JBrowse link NW_004936617 2,273,033 2,383,120 RGD:9068941
G Apcs amyloid P component, serum JBrowse link NW_004936740 979,007 987,312 RGD:9068941
G B9d2 B9 domain containing 2 JBrowse link NW_004936661 3,759,031 3,765,361 RGD:9068941
G Bivm basic, immunoglobulin-like variable motif containing JBrowse link NW_004936472 8,237,680 8,273,335 RGD:9068941
G Brat1 BRCA1 associated ATM activator 1 JBrowse link NW_004936823 393,878 404,348 RGD:9068941
G Ccdc134 coiled-coil domain containing 134 JBrowse link NW_004936492 180,135 195,599 RGD:9068941
G Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 JBrowse link NW_004936474 22,514,800 22,516,166 RGD:9068941
G Csrp2 cysteine and glycine rich protein 2 JBrowse link NW_004936568 5,056,006 5,075,277 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link NW_004936623 3,782,005 3,806,616 RGD:9068941
G Ctsl cathepsin L JBrowse link NW_004936680 3,047,355 3,050,640 RGD:9068941
G CUNH19orf33 chromosome unknown C19orf33 homolog JBrowse link NW_004936801 1,077,823 1,080,317 RGD:9068941
G CUNH1orf61 chromosome unknown C1orf61 homolog JBrowse link NW_004936580 5,610,465 5,631,041 RGD:9068941
G Dgcr6l DiGeorge syndrome critical region gene 6 like JBrowse link NW_004936619 4,203,792 4,209,417 RGD:9068941
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Dnase1l2 deoxyribonuclease 1 like 2 JBrowse link NW_004936694 1,808,184 1,810,735 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
G Eid2b EP300 interacting inhibitor of differentiation 2B JBrowse link NW_004936661 2,352,726 2,354,968 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004936491 16,745,310 16,762,422 RGD:9068941
G Ezhip EZH inhibitory protein JBrowse link NW_004936909 106,077 107,828 RGD:9068941
G F8a1 coagulation factor VIII associated 1 JBrowse link NW_004936927 234,162 236,881 RGD:9068941
G Fam50b family with sequence similarity 50 member B JBrowse link NW_004936534 8,580,102 8,581,118 RGD:9068941
G Foxd4 forkhead box D4 JBrowse link NW_004936503 4,658,802 4,660,203 RGD:9068941
G Foxq1 forkhead box Q1 JBrowse link NW_004936633 2,458,473 2,460,990 RGD:9068941
G Get1 guided entry of tail-anchored proteins factor 1 JBrowse link NW_004936500 3,815,200 3,831,693 RGD:9068941
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004936512 11,222,120 11,225,455 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004936509 5,637,600 5,640,335 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Hspa6 heat shock protein family A (Hsp70) member 6 JBrowse link NW_004937131 25,603 28,458 RGD:9068941
G Inka2 inka box actin regulator 2 JBrowse link NW_004936690 370,051 386,094 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Isl2 ISL LIM homeobox 2 JBrowse link NW_004936471 35,840,202 35,845,822 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004936483 477,490 575,143 RGD:9068941
G LOC101958065 uncharacterized LOC101958065 JBrowse link NW_004936739 1,778,016 1,836,177 RGD:9068941
G LOC101960144 zinc finger protein 852 JBrowse link NW_004936695 1,052,208 1,053,597 RGD:9068941
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101967373 transcription elongation factor A protein-like 4 JBrowse link NW_004937070 101,478 103,312 RGD:9068941
G LOC101967816 uncharacterized LOC101967816 JBrowse link NW_004936475 24,361,612 24,367,012 RGD:9068941
G LOC101968893 cytosolic 5'-nucleotidase 1B JBrowse link NW_004936493 12,520,480 12,547,394 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101974512 histone H2A type 1-B/E JBrowse link NW_004936671 1,892,445 1,893,584 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
G Magee1 MAGE family member E1 JBrowse link NW_004936683 2,008,949 2,013,104 RGD:9068941
G Msmb microseminoprotein beta JBrowse link NW_004936728 354,769 374,696 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Naa50 N-alpha-acetyltransferase 50, NatE catalytic subunit JBrowse link NW_004936536 1,221,080 1,257,196 RGD:9068941
G Nacad NAC alpha domain containing JBrowse link NW_004936478 19,883,992 19,893,917 RGD:9068941
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004936491 16,987,797 16,996,423 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
G Page4 PAGE family member 4 JBrowse link NW_004936721 1,347,679 1,350,598 RGD:9068941
G Papolb poly(A) polymerase beta JBrowse link NW_004936765 1,061,846 1,066,002 RGD:9068941
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
G Pou5f2 POU domain class 5, transcription factor 2 JBrowse link NW_004936523 9,360,876 9,363,054 RGD:9068941
G Pydc1 pyrin domain containing 1 JBrowse link NW_004936501 13,561,927 13,564,392 RGD:9068941
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Scrt1 scratch family transcriptional repressor 1 JBrowse link NW_004936470 7,907,294 7,913,136 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004936485 17,812,995 17,866,492 RGD:9068941
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link NW_004936558 1,297,517 1,302,410 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Spata33 spermatogenesis associated 33 JBrowse link NW_004936641 360,941 366,496 RGD:9068941
G Sumo3 small ubiquitin like modifier 3 JBrowse link NW_004936778 1,392,110 1,412,153 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Tex19 testis expressed 19 JBrowse link NW_004936923 807 1,835 RGD:9068941
G Tle5 TLE family member 5, transcriptional modulator JBrowse link NW_004936588 1,746,300 1,753,727 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Usp29 ubiquitin specific peptidase 29 JBrowse link NW_004936882 752,014 753,981 RGD:9068941
G Utf1 undifferentiated embryonic cell transcription factor 1 JBrowse link NW_004936486 19,345,059 19,346,163 RGD:9068941
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
G Zfp28 ZFP28 zinc finger protein JBrowse link NW_004936882 275,907 298,874 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004936519 7,997,824 8,001,614 RGD:9068941
G Zkscan1 zinc finger with KRAB and SCAN domains 1 JBrowse link NW_004936543 150,845 192,197 RGD:9068941
G Znf14 zinc finger protein 14 JBrowse link NW_004936596 1,822,534 1,826,715 RGD:9068941
G Znf251 zinc finger protein 251 JBrowse link NW_004936470 7,591,956 7,620,288 RGD:9068941
G Znf26 zinc finger protein 26 JBrowse link NW_004936660 2,786,740 2,803,476 RGD:9068941
G Znf280a zinc finger protein 280A JBrowse link NW_004936874 624,846 626,357 RGD:9068941
G Znf282 zinc finger protein 282 JBrowse link NW_004936527 5,290,721 5,314,185 RGD:9068941
G Znf30 zinc finger protein 30 JBrowse link NW_004936570 1,284,771 1,297,816 RGD:9068941
G Znf501 zinc finger protein 501 JBrowse link NW_004936695 936,421 944,574 RGD:9068941
G Znf546 zinc finger protein 546 JBrowse link NW_004936661 2,545,011 2,564,695 RGD:9068941
G Znf57 zinc finger protein 57 JBrowse link NW_004936588 1,669,099 1,676,649 RGD:9068941
G Znf615 zinc finger protein 615 JBrowse link NW_004937026 261,317 265,286 RGD:9068941
G Znf619 zinc finger protein 619 JBrowse link NW_004936473 29,411,696 29,424,947 RGD:9068941
G Znf707 zinc finger protein 707 JBrowse link NW_004936470 8,449,554 8,458,330 RGD:9068941
G Znf781 zinc finger protein 781 JBrowse link NW_004936590 5,802,878 5,805,489 RGD:9068941
G Znf891 zinc finger protein 891 JBrowse link NW_004936660 2,874,228 2,882,015 RGD:9068941
G Zscan12 zinc finger and SCAN domain containing 12 JBrowse link NW_004939040 6 8,502 RGD:9068941
NuRD complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
P-body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
peroxisome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
platelet alpha granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Treml1 triggering receptor expressed on myeloid cells like 1 JBrowse link NW_004936476 18,668,809 18,673,183 RGD:9068941
platelet dense granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lgals3bp galectin 3 binding protein JBrowse link NW_004936594 3,303,862 3,316,313 RGD:9068941
PML body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sumo3 small ubiquitin like modifier 3 JBrowse link NW_004936778 1,392,110 1,412,153 RGD:9068941
polysomal ribosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
postsynaptic endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arc activity regulated cytoskeleton associated protein JBrowse link NW_004936470 9,185,145 9,188,260 RGD:9068941
recycling endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plekhj1 pleckstrin homology domain containing J1 JBrowse link NW_004936588 1,333,103 1,335,023 RGD:9068941
ribosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
RNA polymerase II transcription factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
rough endoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
sarcoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
sarcoplasmic reticulum membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
secretory granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
secretory granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
G Hspa6 heat shock protein family A (Hsp70) member 6 JBrowse link NW_004937131 25,603 28,458 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
secretory granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxcr1 C-X-C motif chemokine receptor 1 JBrowse link NW_004936569 715,129 716,187 RGD:9068941
G Fpr1 formyl peptide receptor 1 JBrowse link NW_004937026 155,550 156,608 RGD:9068941
site of double-strand break term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
Smc5-Smc6 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
specific granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004936567 1,373,727 1,385,694 RGD:9068941
specific granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link NW_004936514 11,131,666 11,139,404 RGD:9068941
spindle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Haus4 HAUS augmin like complex subunit 4 JBrowse link NW_004936722 1,352,070 1,378,497 RGD:9068941
stress fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004936740 228,377 242,318 RGD:9068941
synaptic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
tertiary granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004936567 1,373,727 1,385,694 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
trans-Golgi network term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 JBrowse link NW_004936471 4,344,234 4,346,998 RGD:9068941
G Plekhj1 pleckstrin homology domain containing J1 JBrowse link NW_004936588 1,333,103 1,335,023 RGD:9068941
trans-Golgi network membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cog2 component of oligomeric golgi complex 2 JBrowse link NW_004936484 19,723,475 19,756,136 RGD:9068941
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
transcription factor TFIIA complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2a1l general transcription factor IIA subunit 1 like JBrowse link NW_004936508 3,989,492 4,049,975 RGD:9068941
transcription factor TFIIH core complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
transcription factor TFIIH holo complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
transport vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prg2 proteoglycan 2, pro eosinophil major basic protein JBrowse link NW_004936581 5,101,041 5,103,175 RGD:9068941
G Tmed7 transmembrane p24 trafficking protein 7 JBrowse link NW_004936742 779,964 791,738 RGD:9068941
transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain JBrowse link NW_004936476 25,743,512 25,750,809 RGD:9068941
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain JBrowse link NW_004936476 25,730,800 25,741,089 RGD:9068941
type III intermediate filament term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
U1 snRNP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbmxl2 RBMX like 2 JBrowse link NW_004936841 384,923 386,106 RGD:9068941
U12-type spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link NW_004936558 1,297,517 1,302,410 RGD:9068941
U2-type prespliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbmxl2 RBMX like 2 JBrowse link NW_004936841 384,923 386,106 RGD:9068941
zymogen granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reg1a regenerating family member 1 alpha JBrowse link NW_004936556 4,873,331 4,875,608 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 347
    intracellular 249
      intracellular organelle 207
        extrinsic component of organelle membrane + 0
        eyespot apparatus 0
        intracellular membrane-bounded organelle + 188
        intracellular non-membrane-bounded organelle + 71
        intracellular organelle lumen + 105
        intracellular vesicle + 34
        ocelloid 0
        organelle envelope + 10
        organelle subcompartment + 7
        organelle-enclosing lipid monolayer + 0
        zeta DNA polymerase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 347
    cellular anatomical entity 345
      organelle 223
        intracellular organelle 207
          extrinsic component of organelle membrane + 0
          eyespot apparatus 0
          intracellular membrane-bounded organelle + 188
          intracellular non-membrane-bounded organelle + 71
          intracellular organelle lumen + 105
          intracellular vesicle + 34
          ocelloid 0
          organelle envelope + 10
          organelle subcompartment + 7
          organelle-enclosing lipid monolayer + 0
          zeta DNA polymerase complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.