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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of carbohydrate biosynthetic process
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Accession:GO:0043255 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of carbohydrates.
Synonyms:exact_synonym: regulation of carbohydrate anabolism;   regulation of carbohydrate biosynthesis;   regulation of carbohydrate formation;   regulation of carbohydrate synthesis


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negative regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:1624291
RGD:1600115
G C1qtnf12 C1q and TNF related 12 JBrowse link 5 173,390,901 173,395,276 RGD:1624291
RGD:13792537
G C1qtnf3 C1q and TNF related 3 JBrowse link 2 60,920,160 60,942,586 RGD:1624291
G Clk2 CDC-like kinase 2 JBrowse link 2 188,476,789 188,488,809 RGD:1624291
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1600115
RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Erfe erythroferrone JBrowse link 9 98,505,136 98,513,005 RGD:13792537
G Fam3a FAM3 metabolism regulating signaling molecule A JBrowse link X 156,319,687 156,328,974 RGD:1600115
G Fam3c FAM3 metabolism regulating signaling molecule C JBrowse link 4 49,388,962 49,439,892 RGD:1600115
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1600115
RGD:1624291
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2306940
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:1624291
G LOC259246 alpha-2u globulin PGCL1 RGD:1600115
G Maea macrophage erythroblast attacher JBrowse link 14 82,664,248 82,697,673 RGD:1600115
G Mst1 macrophage stimulating 1 JBrowse link 8 116,857,716 116,862,286 RGD:1624291
G Pgp phosphoglycolate phosphatase JBrowse link 10 13,836,105 13,838,731 RGD:10679995
RGD:1624291
G Serpina12 serpin family A member 12 JBrowse link 6 127,696,501 127,711,238 RGD:1624291
RGD:1600115
G Sik1 salt-inducible kinase 1 JBrowse link 20 10,670,747 10,680,279 RGD:1624291
RGD:1600115
G Soga1 suppressor of glucose, autophagy associated 1 JBrowse link 3 153,130,268 153,188,909 RGD:1624291
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:1624291
RGD:1600115
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 JBrowse link 4 118,852,046 118,901,583 RGD:1625425
G Grb10 growth factor receptor bound protein 10 JBrowse link 14 92,021,851 92,122,249 RGD:8553640
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
RGD:13792537
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11529553
G Pask PAS domain containing serine/threonine kinase JBrowse link 9 100,450,595 100,479,719 RGD:1624291
RGD:13792537
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 JBrowse link 1 100,896,582 100,926,443 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
RGD:1624291
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
G Prkg1 protein kinase cGMP-dependent 1 JBrowse link 1 248,982,039 250,300,952 RGD:7777104
positive regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arpp19 cAMP-regulated phosphoprotein 19 JBrowse link 8 81,949,577 81,972,054 RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1600115
RGD:1624291
G Dgat2 diacylglycerol O-acyltransferase 2 JBrowse link 1 164,113,459 164,143,818 RGD:10400884
G Foxo1 forkhead box O1 JBrowse link 2 141,451,234 141,527,016 RGD:1624291
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:1600115
G Gpt glutamic--pyruvic transaminase JBrowse link 7 117,759,083 117,761,932 RGD:11342811
G Gpt2 glutamic--pyruvic transaminase 2 JBrowse link 19 22,599,003 22,633,529 RGD:11342811
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:10445837
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624992
RGD:10445837
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A JBrowse link 6 125,040,803 125,083,496 RGD:1624291
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B JBrowse link 14 113,570,150 113,618,138 RGD:1624291
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:8554594
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 JBrowse link 18 63,415,298 63,489,240 RGD:1624291
RGD:1600115
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:9585757
RGD:1600115
RGD:1624291
G Stk11 serine/threonine kinase 11 JBrowse link 7 12,440,751 12,457,513 RGD:2291956
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:1624291
G Kat2a lysine acetyltransferase 2A JBrowse link 10 88,611,586 88,619,558 RGD:1624291
G Kat2b lysine acetyltransferase 2B JBrowse link 9 4,440,982 4,492,949 RGD:1624291
G Supt20h SPT20 homolog, SAGA complex component JBrowse link 2 143,892,609 143,925,733 RGD:1624291
G Wdr5 WD repeat domain 5 JBrowse link 3 6,061,892 6,080,724 RGD:1624291
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1624291
RGD:1600115
G C1qtnf2 C1q and TNF related 2 JBrowse link 10 29,067,102 29,084,035 RGD:1624291
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 7 61,785,423 61,816,775 RGD:1624291
G Epm2aip1 EPM2A interacting protein 1 JBrowse link 8 119,524,039 119,531,387 RGD:1624291
RGD:13792537
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:12910990
RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1600115
RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:1624291
RGD:1600115
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Irs1 insulin receptor substrate 1 JBrowse link 9 88,033,668 88,086,488 RGD:1624291
RGD:1600115
G Irs2 insulin receptor substrate 2 JBrowse link 16 83,824,515 83,848,569 RGD:1624291
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G JBrowse link 17 29,566,032 29,570,294 RGD:1624291
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:1624291
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:9588629
RGD:9588632
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:1600115
RGD:1624291
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:1600115
RGD:1624291
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:9588632
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcyap1r1 ADCYAP receptor type I JBrowse link 4 85,662,809 85,711,696 RGD:2315982
G Avpr1b arginine vasopressin receptor 1B JBrowse link 13 48,367,307 48,378,831 RGD:1624291
G Cd244 CD244 molecule JBrowse link 13 89,959,091 89,995,993 RGD:1624291
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor JBrowse link 1 48,076,761 48,108,218 RGD:2316794
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743897
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:9999203
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
G Pth1r parathyroid hormone 1 receptor JBrowse link 8 118,984,531 119,012,803 RGD:8553376
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 12 17,309,122 17,315,267 RGD:1600115
RGD:1624291
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:1624291
RGD:1600115
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:6902910
G P2ry1 purinergic receptor P2Y1 JBrowse link 2 151,314,818 151,320,312 RGD:8553380
G P2ry6 pyrimidinergic receptor P2Y6 JBrowse link 1 165,972,439 166,008,348 RGD:1624291
G Plcd1 phospholipase C, delta 1 JBrowse link 8 127,753,514 127,782,070 RGD:2300424
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:1624291
regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
RGD:1600115
G Dgkq diacylglycerol kinase, theta JBrowse link 14 2,069,409 2,083,370 RGD:1624291
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:1600115
RGD:1624291
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1624291
RGD:13792537
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:14700925
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:1624291
G LOC100911564 glycine N-methyltransferase-like JBrowse link 9 16,314,136 16,317,575 RGD:13792537
G Nln neurolysin JBrowse link 2 34,086,970 34,185,835 RGD:1624291
RGD:1600115
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:1624291
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1624291
RGD:1600115
G Pdk2 pyruvate dehydrogenase kinase 2 JBrowse link 10 82,838,270 82,852,758 RGD:1600115
RGD:1624291
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:1624291
G Sesn2 sestrin 2 JBrowse link 5 150,684,891 150,703,846 RGD:1624291
G Sirt7 sirtuin 7 JBrowse link 10 109,796,046 109,802,821 RGD:1600115
RGD:1624291
G Slc35b4 solute carrier family 35 member B4 JBrowse link 4 61,550,995 61,573,003 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
RGD:1624291
regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxk1 forkhead box K1 JBrowse link 12 14,183,436 14,244,634 RGD:1624291
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
G Foxo1 forkhead box O1 JBrowse link 2 141,451,234 141,527,016 RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1625611
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:2304267
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:2304267
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B JBrowse link 16 60,415,192 60,427,498 RGD:2304267
RGD:2306167
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:2306167
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D JBrowse link 3 173,950,613 173,953,684 RGD:2306167
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F JBrowse link X 15,774,091 15,784,711 RGD:1624291
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19335
    metabolic process 11555
      biosynthetic process 5934
        regulation of biosynthetic process 4000
          regulation of carbohydrate biosynthetic process 113
            regulation of L-ascorbic acid biosynthetic process + 0
            regulation of gluconeogenesis + 60
            regulation of glucosinolate biosynthetic process 0
            regulation of inositol biosynthetic process + 0
            regulation of inositol phosphate biosynthetic process + 19
            regulation of lactose biosynthetic process + 0
            regulation of photosynthesis, dark reaction + 0
            regulation of polysaccharide biosynthetic process + 38
            regulation of raffinose biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19335
    biological regulation 13337
      regulation of biological process 12652
        regulation of metabolic process 6536
          regulation of primary metabolic process 5812
            regulation of carbohydrate metabolic process 202
              regulation of carbohydrate biosynthetic process 113
                regulation of L-ascorbic acid biosynthetic process + 0
                regulation of gluconeogenesis + 60
                regulation of glucosinolate biosynthetic process 0
                regulation of inositol biosynthetic process + 0
                regulation of inositol phosphate biosynthetic process + 19
                regulation of lactose biosynthetic process + 0
                regulation of photosynthesis, dark reaction + 0
                regulation of polysaccharide biosynthetic process + 38
                regulation of raffinose biosynthetic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.