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ONTOLOGY REPORT - ANNOTATIONS


Term:response to alkaloid
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Accession:GO:0043279 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.


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response to alkaloid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP RGD PMID:16684876 RGD:1625634 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Bche butyrylcholinesterase IDA RGD PMID:17159811 RGD:1599448 NCBI chr 2:171,104,476...171,196,186
Ensembl chr 2:171,100,140...171,196,395
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP Berberine RGD PMID:30868489 RGD:25823184 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP cyclopamine RGD PMID:18772241 RGD:2303053 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Dhx15 DEAH-box helicase 15 IEP RGD PMID:23275536 RGD:10059614 NCBI chr14:61,136,740...61,174,880
Ensembl chr14:61,136,746...61,174,880
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP matrine RGD PMID:23545940 RGD:9685361 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP monocrotaline RGD PMID:15067214 RGD:9068460 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP cyclopamine RGD PMID:18772241 RGD:2303053
G Myc MYC proto-oncogene, bHLH transcription factor ISO MGI:1931143 (MGI:3692035|PMID:12970677) RGD PMID:12970677 MGI:3692035 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IEP Berberine RGD PMID:31432116 RGD:25823187 NCBI chr19:38,422,210...38,437,103
Ensembl chr19:38,422,164...38,437,180
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 IEP conophylline RGD PMID:15448089 RGD:2311187 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP theophylline RGD PMID:16988215 RGD:2303051 NCBI chr20:3,973,424...3,978,845
Ensembl chr20:3,973,420...3,978,845
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 IEP bicuculline RGD PMID:23275536 RGD:10059614 NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 IEP bacterial alkaloid K252a RGD PMID:9288726 RGD:2317254 NCBI chr 6:109,169,739...109,205,004
Ensembl chr 6:109,169,741...109,205,004
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IEP RGD PMID:20717874 RGD:5130964 NCBI chr 4:157,864,905...157,877,634
Ensembl chr 4:157,864,969...157,877,633
JBrowse link
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 IEP RGD PMID:15732135 RGD:2303353 NCBI chr 8:117,679,328...117,691,073
Ensembl chr 8:117,679,278...117,691,071
JBrowse link
behavioral response to cocaine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISS
ISO
GO_REF:0000024
(MGI:3691518|PMID:10850552)
UniProt
RGD
PMID:10850552 GO_REF:0000024, MGI:3691518 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:2148638 (MGI:2178201|PMID:11923452) RGD PMID:11923452 MGI:2178201 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:23583595 RGD:38501054 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO MGI:3531299|MGI:3720892 (MGI:3764563|PMID:18032670) RGD PMID:18032670 MGI:3764563 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP RGD PMID:21813699 RGD:5147489 NCBI chr10:92,191,473...92,233,662
Ensembl chr10:92,191,718...92,232,645
JBrowse link
G Drd1 dopamine receptor D1 IMP
ISO
IEA
MGI:3527157 (MGI:3711455|PMID:16014726)
GO_REF:0000107
RGD
Ensembl
PMID:16014726, PMID:16377433 GO_REF:0000107, MGI:3711455, RGD:1581397 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:2387895 (MGI:3708416|PMID:17426149) RGD PMID:17426149 MGI:3708416 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Drd3 dopamine receptor D3 ISO
IMP
(PMID:8815892)
(MGI:4418640|PMID:10432116)
RGD PMID:8815892, PMID:10432116, PMID:16026479 MGI:4418640, RGD:7175068 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Drd4 dopamine receptor D4 IEA
ISO
GO_REF:0000107
MGI:2178631 (MGI:1097029|PMID:9323127), (MGI:3610827|PMID:12783155)
Ensembl
RGD
PMID:9323127, PMID:12783155 GO_REF:0000107, MGI:1097029, MGI:3610827 NCBI chr 1:214,278,296...214,282,818
Ensembl chr 1:214,278,296...214,281,483
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO MGI:4418499 (MGI:5577209|PMID:24584053) RGD PMID:24584053 MGI:5577209 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
G Fadd Fas associated via death domain IEP RGD PMID:18580876 RGD:11341804 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Homer1 homer scaffold protein 1 ISO MGI:3526529 (MGI:3530962|PMID:15294147) RGD PMID:15294147 MGI:3530962 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Homer2 homer scaffold protein 2 ISO MGI:3526530 (MGI:3530962|PMID:15294147) RGD PMID:15294147 MGI:3530962 NCBI chr 1:143,443,300...143,535,579
Ensembl chr 1:143,443,300...143,535,583
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IDA RGD PMID:23390419 RGD:7257659 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Kalrn kalirin, RhoGEF kinase ISO MGI:3831292 (MGI:5289726|PMID:21880917) RGD PMID:21880917 MGI:5289726 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Nos1 nitric oxide synthase 1 IMP RGD PMID:23579428 RGD:7257653 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Oprk1 opioid receptor, kappa 1 IMP RGD PMID:24919534 RGD:9831434 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (MGI:5551515|PMID:24449909) RGD PMID:24449909 MGI:5551515 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B ISO MGI:3799291 (MGI:3797712|PMID:18496528) RGD PMID:18496528 MGI:3797712 NCBI chr10:86,303,727...86,312,770
Ensembl chr10:86,303,727...86,312,762
JBrowse link
G Sdk1 sidekick cell adhesion molecule 1 ISO (MGI:5551515|PMID:24449909) RGD PMID:24449909 MGI:5551515 NCBI chr12:14,445,798...15,443,442
Ensembl chr12:14,449,010...15,098,786
JBrowse link
G Snca synuclein alpha IMP RGD PMID:18001274 RGD:2291826 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
cellular response to alkaloid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP coptisine, berberine, palmatine RGD PMID:20410605 RGD:8657336 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Ddc dopa decarboxylase IEP asimilobine RGD PMID:18696327 RGD:5129084 NCBI chr14:91,905,919...91,996,816
Ensembl chr14:91,905,919...91,996,774
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B ISO
ISS
(PMID:1315531)
GO_REF:0000024
RGD
UniProt
PMID:1315531 GO_REF:0000024 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP berberine RGD PMID:20674665 RGD:4145373 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP camptothecin RGD PMID:19136059 RGD:2317366 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP berberine RGD PMID:21108488 RGD:7207365 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Rad51 RAD51 recombinase ISO MGI:5444025|MGI:5444027 (MGI:5442243|PMID:22778135) RGD PMID:22778135 MGI:5442243 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Star steroidogenic acute regulatory protein IEP evodiamine, rutaecarpine RGD PMID:19639602 RGD:4145624 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Th tyrosine hydroxylase IEP asimilobine RGD PMID:18696327 RGD:5129084 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 IMP PMID:17582331 UniProt PMID:17582331 RGD:8553505 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
cellular response to caffeine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Casq2 calsequestrin 2 ISO
IEA
(PMID:16908766)
GO_REF:0000107
RGD
Ensembl
PMID:16908766 GO_REF:0000107 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Chek1 checkpoint kinase 1 IEP RGD PMID:11278490 RGD:2316109 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Gstm2 glutathione S-transferase mu 2 ISO
IEA
(PMID:22406107)
GO_REF:0000107
RGD
Ensembl
PMID:22406107 GO_REF:0000107 NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:210,720,719...210,726,179
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17516843 RGD:10059651 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:74313|PMID:7621815)
(PMID:16163667), (PMID:26115329)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:7621815, PMID:16163667, PMID:26115329 GO_REF:0000024, GO_REF:0000107, MGI:74313 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Ryr2 ryanodine receptor 2 ISO
ISS
IEA
(PMID:12919952)
(MGI:1267127|PMID:9628868), (MGI:2182484|PMID:12089338), (MGI:5431202|PMID:22406107)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9628868, PMID:12089338, PMID:12919952, PMID:22406107 GO_REF:0000024, GO_REF:0000107, MGI:1267127, MGI:2182484, MGI:5431202 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Selenon selenoprotein N ISO (MGI:5494499|PMID:23325319) RGD PMID:23325319 MGI:5494499 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO (MGI:1927695|PMID:10967099) RGD PMID:10967099 MGI:1927695 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Tmem38a transmembrane protein 38a IEA
ISO
GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107, MGI:3715564 NCBI chr16:18,960,197...18,974,942
Ensembl chr16:18,959,315...18,974,770
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IEP RGD PMID:22319196 RGD:10043374 NCBI chr 5:3,783,247...3,836,485
Ensembl chr 5:3,783,247...3,836,485
JBrowse link
cellular response to camptothecin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Fancb FA complementation group B ISO MGI:2156841 (MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:5648586 NCBI chr  X:31,124,018...31,140,790
Ensembl chr  X:31,124,018...31,140,711
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Recql5 RecQ like helicase 5 ISO MGI:2448558 (MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:5648586 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Spidr scaffold protein involved in DNA repair ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:89,009,931...89,260,361
Ensembl chr11:89,009,931...89,260,297
JBrowse link
cellular response to cocaine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna2 cyclin A2 IEP RGD PMID:18593214 RGD:10054470 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Crh corticotropin releasing hormone IDA PMID:14751291 UniProt PMID:14751291 RGD:8553798 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
G Crhbp corticotropin releasing hormone binding protein IDA PMID:14751291 UniProt PMID:14751291 RGD:8553798 NCBI chr 2:25,141,471...25,153,334
Ensembl chr 2:25,141,471...25,153,334
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (MGI:5577209|PMID:24584053) RGD PMID:24584053 MGI:5577209 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
cellular response to isoquinoline alkaloid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 IEP berberine RGD PMID:16448624 RGD:5131909 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA bicuculline RGD PMID:22262897 RGD:12790719 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
cellular response to morphine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 ISS
ISO
IDA
IEA
GO_REF:0000024
(MGI:3808962|PMID:18222416)
PMID:16186630
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18222416, PMID:16186630 GO_REF:0000024, GO_REF:0000107, MGI:3808962, RGD:13825193 NCBI chr 7:105,353,883...105,593,372
Ensembl chr 7:105,353,913...105,592,804
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP morphine RGD PMID:19176808 RGD:2313012 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448
JBrowse link
G Atg7 autophagy related 7 IEP RGD PMID:23800874 RGD:11557986 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 IEP RGD PMID:18178009 RGD:6483056 NCBI chr11:35,011,007...35,262,362
Ensembl chr11:35,024,196...35,099,383
JBrowse link
G Oprm1 opioid receptor, mu 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:43,454,803...43,704,948
Ensembl chr 1:43,454,803...43,704,948
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B ISS
ISO
GO_REF:0000024
(MGI:3834288|PMID:18439408)
UniProt
RGD
PMID:18439408 GO_REF:0000024, MGI:3834288 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G RT1-Bb RT1 class II, locus Bb IEP RGD PMID:14742686 RGD:7488923 NCBI chr20:4,043,726...4,049,367
Ensembl chr20:4,039,413...4,049,711
JBrowse link
cellular response to staurosporine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 ISO (PMID:22253444) RGD PMID:22253444 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp6 caspase 6 ISO (PMID:22253444) RGD PMID:22253444 NCBI chr 2:235,341,326...235,353,715
Ensembl chr 2:235,341,365...235,353,967
Ensembl chr 2:235,341,365...235,353,967
JBrowse link
G Casp7 caspase 7 ISO (PMID:22253444) RGD PMID:22253444 NCBI chr 1:277,190,557...277,242,779
Ensembl chr 1:277,190,964...277,242,774
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19137075 RGD:7241807 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:10332085 RGD:7243183 NCBI chr17:9,747,766...9,762,739
Ensembl chr17:9,747,752...9,762,813
JBrowse link
response to caffeine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA RGD PMID:16481441 RGD:1625231 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:17236787 RGD:1599474 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:6149265 RGD:2303533 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) IEP RGD PMID:6149265 RGD:2303533 NCBI chr19:42,066,103...42,087,906
Ensembl chr19:42,066,351...42,082,012
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:24717552 RGD:9590296 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:24717552 RGD:9590296 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:12834266 RGD:9685460 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISO MGI:2182095|MGI:3514012 (MGI:3513875|PMID:15289441) RGD PMID:15289441 MGI:3513875 NCBI chr 3:147,042,944...147,062,725
Ensembl chr 3:147,042,944...147,062,724
JBrowse link
G Gnal G protein subunit alpha L ISO MGI:2151207 (MGI:3719553|PMID:11404425) RGD PMID:11404425 MGI:3719553 NCBI chr18:62,805,406...62,946,133
Ensembl chr18:62,805,410...62,944,630
JBrowse link
G Hdac1 histone deacetylase 1 IEP RGD PMID:24717552 RGD:9590296 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 IEP RGD PMID:24717552 RGD:9590296 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:22995397 RGD:8661261 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Il6 interleukin 6 IEP Cell shortening response decreased RGD PMID:15845578 RGD:2306941 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Irs1 insulin receptor substrate 1 IDA
IEP
RGD PMID:21940847, PMID:22995397 RGD:6483017, RGD:8661261 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:18486259 RGD:2301880 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IDA RGD PMID:19608206 RGD:2316809 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 IDA RGD PMID:19608206 RGD:2316809 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Prss1 serine protease 1 IDA RGD PMID:2726780 RGD:1599974 NCBI chr 4:70,776,046...70,779,249
Ensembl chr 4:70,776,046...70,779,249
JBrowse link
G Ryr1 ryanodine receptor 1 IDA PMID:19116207 BHF-UCL PMID:19116207 RGD:7242196 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Ryr2 ryanodine receptor 2 ISO (PMID:17921453)
(MGI:1345009|PMID:10473538), (MGI:3027171|PMID:14593104)
RGD PMID:10473538, PMID:14593104, PMID:17921453 MGI:1345009, MGI:3027171 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Sdc2 syndecan 2 IEP RGD PMID:16458123 RGD:2311709 NCBI chr 7:71,572,731...71,686,139
Ensembl chr 7:71,572,941...71,686,044
JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:16544096 RGD:2290579 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
response to camptothecin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:4822286|PMID:20647423) RGD PMID:20647423 MGI:4822286 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
response to cocaine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12373739 RGD:1598515 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 IEA
ISO
GO_REF:0000107
(MGI:5430447|PMID:22575564)
Ensembl
RGD
PMID:22575564 GO_REF:0000107, MGI:5430447 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Adra1a adrenoceptor alpha 1A ISO RGD RGD:11556240 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEP RGD PMID:17084983 RGD:2293080 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 IDA RGD PMID:21276808 RGD:13524552 NCBI chr10:95,954,160...96,015,484
Ensembl chr10:95,951,234...96,015,499
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO (MGI:3033267|PMID:14769920) RGD PMID:14769920 MGI:3033267 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:1926253 (MGI:3618656|PMID:11282258) RGD PMID:11282258 MGI:3618656 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19401177 RGD:2314673 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Crh corticotropin releasing hormone IEP RGD PMID:21762287 RGD:5490536 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:19562697 RGD:9685177 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:23688924 RGD:9589062 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:23688924 RGD:9589062 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IEP RGD PMID:19457111 RGD:2316242 NCBI chr15:43,475,640...43,581,725
Ensembl chr15:43,477,629...43,542,939
JBrowse link
G Drd1 dopamine receptor D1 ISO MGI:1857158|MGI:2159306 (MGI:1098091|PMID:9387887), (MGI:1351083|PMID:10661513), (MGI:2137377|PMID:10222120), (MGI:3663985|PMID:16908842), (MGI:3761901|PMID:12354293), (MGI:3765089|PMID:18045908) RGD PMID:9387887, PMID:10222120, PMID:10661513, PMID:12354293, PMID:16908842, PMID:18045908 MGI:1098091, MGI:1351083, MGI:2137377, MGI:3663985, MGI:3761901, MGI:3765089 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:1857875|MGI:2387895 (MGI:2178200|PMID:11923462), (MGI:3610742|PMID:12185400), (MGI:3655899|PMID:11943831), (MGI:3811680|PMID:18671743) RGD PMID:11923462, PMID:11943831, PMID:12185400, PMID:18671743 MGI:2178200, MGI:3610742, MGI:3655899, MGI:3811680 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Drd3 dopamine receptor D3 ISO (PMID:10415668)
MGI:1857159 (MGI:3610635|PMID:10943692)
RGD PMID:10415668, PMID:10943692 MGI:3610635 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Drd5 dopamine receptor D5 IEA
ISO
GO_REF:0000107
MGI:3528074 (MGI:3610834|PMID:12768268)
Ensembl
RGD
PMID:12768268 GO_REF:0000107, MGI:3610834 NCBI chr14:77,220,579...77,222,006
Ensembl chr14:77,220,579...77,222,006
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 IEP RGD PMID:20187946 RGD:10045569 NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21334415 RGD:5131659 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IEP RGD PMID:19014379 RGD:9685328 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G En1 engrailed homeobox 1 IEP RGD PMID:17070804 RGD:5687200 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
JBrowse link
G Fadd Fas associated via death domain IEP RGD PMID:21925237 RGD:11341806 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:24810662 RGD:11667955 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:20600170 RGD:4107066 NCBI chr10:42,441,723...42,760,200
Ensembl chr10:42,614,713...42,760,200
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19322657 RGD:2326006 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19322657 RGD:2326006 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 IEP RGD PMID:25213649 RGD:13514050 NCBI chr 1:282,265,371...282,467,842
Ensembl chr 1:282,265,370...282,462,605
JBrowse link
G Grm2 glutamate metabotropic receptor 2 IMP RGD PMID:28700935 RGD:38501064 NCBI chr 8:115,344,999...115,358,628
Ensembl chr 8:115,344,999...115,358,046
JBrowse link
G Hdac2 histone deacetylase 2 IEP RGD PMID:16670375 RGD:2306447 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac5 histone deacetylase 5 IEP
ISO
MGI:3056065 (MGI:3775380|PMID:17988634) RGD PMID:17988634, PMID:21954104 MGI:3775380, RGD:9681462 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hnmt histamine N-methyltransferase IEP RGD PMID:9231750 RGD:2316833 NCBI chr 3:905,111...937,038
Ensembl chr 3:904,765...937,102
JBrowse link
G Homer1 homer scaffold protein 1 IEP RGD PMID:18932227 RGD:2316855 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:22860061 RGD:10445834 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IEP RGD PMID:22860061 RGD:10445834 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:17849098 RGD:2311462 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 IEP RGD PMID:14557723 RGD:1624249 NCBI chr 9:61,680,529...61,691,202
Ensembl chr 9:61,680,530...61,690,956
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IDA RGD PMID:17509084 RGD:1626452 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Htr3a 5-hydroxytryptamine receptor 3A IEP RGD PMID:17105936 RGD:2316965 NCBI chr 8:53,211,436...53,223,878
Ensembl chr 8:53,211,438...53,223,804
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 IEP RGD PMID:16670375 RGD:2306447 NCBI chr18:70,248,568...70,263,190
Ensembl chr18:70,248,713...70,263,164
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14625023 RGD:2317407 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA
IEP
RGD PMID:23688924, PMID:20711185 RGD:9589062, RGD:12789445 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mt-nd6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 IEP RGD PMID:9261805 RGD:8657132 NCBI chr MT:13,543...14,061
Ensembl chr MT:13,543...14,061
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:20977929 RGD:10040960 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IDA RGD PMID:16081054 RGD:2325998 NCBI chr 8:53,836,797...54,134,881
Ensembl chr 8:53,839,098...53,901,358
JBrowse link
G Nefh neurofilament heavy IEP RGD PMID:24507117 RGD:9693734 NCBI chr14:85,181,572...85,191,557
Ensembl chr14:85,181,572...85,191,557
JBrowse link
G Nts neurotensin IEP RGD PMID:11182247 RGD:9727458 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:10554970, PMID:9645969 RGD:9831419, RGD:9831421 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:17425581 RGD:2316610 NCBI chr 1:43,454,803...43,704,948
Ensembl chr 1:43,454,803...43,704,948
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IEP RGD PMID:18609307 RGD:2304103 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IEP RGD PMID:16677710 RGD:2304172 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pgr progesterone receptor IDA RGD PMID:17109827 RGD:7248706 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
G Pitx3 paired-like homeodomain 3 IEP RGD PMID:17070804 RGD:5687200 NCBI chr 1:265,886,766...265,899,947
Ensembl chr 1:265,887,230...265,899,958
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:23644055 RGD:9999166 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B IDA RGD PMID:26142455 RGD:13514094 NCBI chr10:86,303,727...86,312,770
Ensembl chr10:86,303,727...86,312,762
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IEP RGD PMID:12117546 RGD:1642634 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IEP RGD PMID:17632279 RGD:13524536 NCBI chr13:88,054,817...88,061,108
Ensembl chr13:88,054,817...88,061,108
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IEP RGD PMID:19038779 RGD:5130996 NCBI chr 1:280,397,831...280,457,968
Ensembl chr 1:280,423,079...280,457,148
JBrowse link
G Slc6a1 solute carrier family 6 member 1 IEP RGD PMID:12832547 RGD:1643213 NCBI chr 4:146,258,842...146,292,176
Ensembl chr 4:146,276,862...146,292,213
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO (MGI:3811680|PMID:18671743) RGD PMID:18671743 MGI:3811680 NCBI chr 1:32,323,011...32,363,983
Ensembl chr 1:32,321,580...32,363,983
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 IDA RGD PMID:14736491 RGD:1601348 NCBI chr 1:170,383,682...170,387,525
Ensembl chr 1:170,383,682...170,387,524
JBrowse link
G Snca synuclein alpha IEP RGD PMID:14622225 RGD:6218992 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Sncg synuclein, gamma IEP RGD PMID:14622225 RGD:6218992 NCBI chr16:10,722,110...10,726,648
Ensembl chr16:10,722,106...10,726,707
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IEP RGD PMID:21536109 RGD:27372882 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G Tacr3 tachykinin receptor 3 IMP RGD PMID:17445241 RGD:2305931 NCBI chr 2:240,021,152...240,118,971
Ensembl chr 2:240,021,152...240,118,971
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IEP RGD PMID:23745104 RGD:10043322 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
G Ube3a ubiquitin protein ligase E3A IEP RGD PMID:24810662 RGD:11667955 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link
response to codeine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:24914722 RGD:11041146 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
response to isoquinoline alkaloid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP oxycodone RGD PMID:23439660 RGD:11041186 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
response to morphine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:26554626 RGD:11041102 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 IEP RGD PMID:22845665 RGD:11099987 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621
JBrowse link
G Ada adenosine deaminase IMP RGD PMID:19934879 RGD:5128863 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Adcy5 adenylate cyclase 5 IEP RGD PMID:18801381 RGD:13464135 NCBI chr11:68,695,839...68,842,452
Ensembl chr11:68,695,839...68,842,320
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:2148638 (MGI:2178201|PMID:11923452) RGD PMID:11923452 MGI:2178201 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19804815, PMID:19463710 RGD:2314642, RGD:2314667 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEP RGD PMID:18657552 RGD:10059657 NCBI chr18:56,887,722...56,910,610
Ensembl chr18:56,887,354...56,918,345
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IEP RGD PMID:28108674 RGD:13463594 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:20977699 RGD:4890043 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:23775491 RGD:7248563 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:1857875|MGI:2387895|MGI:2388386|MGI:2656648 (MGI:2151226|PMID:11567069), (MGI:2178015|PMID:11264672), (MGI:3576272|PMID:12182883), (MGI:3653553|PMID:9252189), (MGI:3655899|PMID:11943831) RGD PMID:9252189, PMID:11264672, PMID:11567069, PMID:11943831, PMID:12182883 MGI:2151226, MGI:2178015, MGI:3576272, MGI:3653553, MGI:3655899 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Drd3 dopamine receptor D3 ISO MGI:1857159 (MGI:2450222|PMID:12574430) RGD PMID:12574430 MGI:2450222 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Ednra endothelin receptor type A IMP RGD PMID:16293342, PMID:16741068 RGD:1581828, RGD:4892606 NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:20553911 RGD:9685461 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Fadd Fas associated via death domain IDA RGD PMID:21088039 RGD:11341805 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Fga fibrinogen alpha chain IEP in conjunction with memory test RGD PMID:24855564 RGD:9685019 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:15772255 RGD:2293776 NCBI chr 1:80,214,691...80,221,417
Ensembl chr 1:80,214,494...80,221,710
JBrowse link
G Ghr growth hormone receptor IEP RGD PMID:11335057 RGD:2307381 NCBI chr 2:53,149,225...53,413,954
Ensembl chr 2:53,150,370...53,413,638
JBrowse link
G Gnao1 G protein subunit alpha o1 IEP RGD PMID:8458398 RGD:2302014 NCBI chr19:11,513,201...11,669,578
Ensembl chr19:11,513,201...11,669,578
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IEP RGD PMID:24528483 RGD:13506244 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
G Gpi glucose-6-phosphate isomerase IMP RGD PMID:6447740 RGD:11051960 NCBI chr 1:90,063,411...90,091,287
Ensembl chr 1:90,063,411...90,091,287
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEA
ISO
GO_REF:0000107
MGI:1928270 (MGI:3797147|PMID:18423864)
Ensembl
RGD
PMID:18423864 GO_REF:0000107, MGI:3797147 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IEP RGD PMID:29081032 RGD:13506833 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 IEP RGD PMID:29081032 RGD:13506833 NCBI chr12:49,626,871...49,750,389
Ensembl chr12:49,626,871...49,746,272
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 IEP RGD PMID:12384166 RGD:727454 NCBI chr 1:282,265,371...282,467,842
Ensembl chr 1:282,265,370...282,462,605
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:15317861 RGD:1626676 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:20190558 RGD:11560529 NCBI chr 3:150,801,289...150,802,935
Ensembl chr 3:150,801,289...150,802,935
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14625023 RGD:2317407 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mir338 microRNA 338 IEP RGD PMID:28108674 RGD:13463594 NCBI chr10:109,195,251...109,195,316 JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:24382350 RGD:10040983 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Npff neuropeptide FF-amide peptide precursor IEP RGD PMID:15207282 RGD:2316569 NCBI chr 7:144,127,084...144,127,873
Ensembl chr 7:144,127,085...144,127,873
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:16753266 RGD:9831397 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:16194531, PMID:16753266 RGD:2316627, RGD:9831397 NCBI chr 1:43,454,803...43,704,948
Ensembl chr 1:43,454,803...43,704,948
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:18771713 RGD:2308891 NCBI chr 2:91,450,162...91,497,091
Ensembl chr 2:91,450,162...91,497,091
JBrowse link
G Pea15 proliferation and apoptosis adaptor protein 15 IEP RGD PMID:19758790 RGD:2326031 NCBI chr13:90,579,844...90,589,466
Ensembl chr13:90,579,846...90,589,466
JBrowse link
G Penk proenkephalin IEP RGD PMID:23300784 RGD:10003095 NCBI chr 5:17,056,412...17,061,762
Ensembl chr 5:17,056,419...17,061,837
JBrowse link
G Pitx3 paired-like homeodomain 3 IEP RGD PMID:23215787 RGD:11535121 NCBI chr 1:265,886,766...265,899,947
Ensembl chr 1:265,887,230...265,899,958
JBrowse link
G Plcg1 phospholipase C, gamma 1 IEP RGD PMID:17524370 RGD:2299883 NCBI chr 3:156,727,642...156,758,307
Ensembl chr 3:156,727,642...156,758,307
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B ISO MGI:3799291 (MGI:3797712|PMID:18496528) RGD PMID:18496528 MGI:3797712 NCBI chr10:86,303,727...86,312,770
Ensembl chr10:86,303,727...86,312,762
JBrowse link
G Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha ISO (MGI:3588907|PMID:16102737) RGD PMID:16102737 MGI:3588907 NCBI chr15:43,673,958...43,733,182
Ensembl chr15:43,673,960...43,733,182
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit ISO (MGI:3588907|PMID:16102737) RGD PMID:16102737 MGI:3588907 NCBI chr 1:78,944,054...78,968,361
Ensembl chr 1:78,944,040...78,968,329
JBrowse link
G Prkce protein kinase C, epsilon ISO MGI:2152043 (MGI:3798724|PMID:16899053) RGD PMID:16899053 MGI:3798724 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Prkcg protein kinase C, gamma ISS
ISO
GO_REF:0000024
(MGI:3760696|PMID:11246146)
UniProt
RGD
PMID:11246146 GO_REF:0000024, MGI:3760696 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP RGD PMID:18400403 RGD:2298784 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IEP RGD PMID:22056472, PMID:12653973 RGD:13524518, RGD:13524581 NCBI chr13:88,054,817...88,061,108
Ensembl chr13:88,054,817...88,061,108
JBrowse link
G Srr serine racemase IEP RGD PMID:18603832 RGD:2302212 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
G Tac1 tachykinin, precursor 1 IEP RGD PMID:17950674 RGD:2304334 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tac3 tachykinin precursor 3 IEP RGD PMID:7536308 RGD:2305965 NCBI chr 7:71,023,976...71,030,582
Ensembl chr 7:71,023,976...71,030,582
JBrowse link
G Tacr1 tachykinin receptor 1 IEP RGD PMID:17950674 RGD:2304334 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Tacr3 tachykinin receptor 3 IEP RGD PMID:7536308 RGD:2305965 NCBI chr 2:240,021,152...240,118,971
Ensembl chr 2:240,021,152...240,118,971
JBrowse link
G Tlr4 toll-like receptor 4 IEP RGD PMID:18599265 RGD:7777128 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    response to stimulus 10580
      response to chemical 6337
        response to nitrogen compound 1552
          response to organonitrogen compound 1456
            response to alkaloid 184
              cellular response to alkaloid + 47
              response to caffeine + 33
              response to camptothecin + 6
              response to cocaine + 79
              response to isoquinoline alkaloid + 60
              response to staurosporine + 5
              response to tropane + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.