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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of RNA splicing
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Accession:GO:0043484 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
Synonyms:xref: MIPS_funcat:11.04.03.01.10


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regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07051190.1 RGD:13792537
G Aff2 AF4/FMR2 family, member 2 JBrowse link X 153,539,951 154,051,022 RGD:1624291
RGD:13792537
G Ahnak AHNAK nucleoprotein JBrowse link 1 225,184,883 225,429,638 RGD:1624291
RGD:13792537
RGD:1600115
G Akap17a A-kinase anchoring protein 17A JBrowse link 12 18,527,116 18,531,780 RGD:1624291
G Brdt bromodomain testis associated JBrowse link 14 3,437,876 3,462,613 RGD:1624291
RGD:1600115
G Cdk12 cyclin-dependent kinase 12 JBrowse link 10 86,157,186 86,210,657 RGD:8553775
G Celf1 CUGBP, Elav-like family member 1 JBrowse link 3 79,768,900 79,844,548 RGD:1624291
RGD:1600115
G Clk1 CDC-like kinase 1 JBrowse link 9 65,296,777 65,308,017 RGD:1624291
G Clk2 CDC-like kinase 2 JBrowse link 2 188,476,789 188,488,809 RGD:1624291
G Clk3 CDC-like kinase 3 JBrowse link 8 62,528,135 62,543,550 RGD:1624291
RGD:1600115
G Clk4 CDC-like kinase 4 JBrowse link 10 36,715,565 36,733,473 RGD:1624291
G Esrp1 epithelial splicing regulatory protein 1 JBrowse link 5 24,576,988 24,631,758 RGD:1624291
RGD:1600115
G Esrp2 epithelial splicing regulatory protein 2 JBrowse link 19 38,113,412 38,120,578 RGD:1600115
RGD:1624291
G Fastk Fas-activated serine/threonine kinase JBrowse link 4 7,260,521 7,264,590 RGD:1624291
G Fblim1 filamin binding LIM protein 1 JBrowse link 5 160,122,466 160,158,921 RGD:13792537
G Fus FUS RNA binding protein JBrowse link 1 199,412,805 199,426,705 RGD:1624291
G Hnrnpf heterogeneous nuclear ribonucleoprotein F JBrowse link 4 149,957,143 149,978,896 RGD:1600115
RGD:1624291
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 JBrowse link 10 35,872,619 35,879,911 RGD:1600115
RGD:1624291
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:13792537
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like JBrowse link 6 2,698,983 2,729,715 RGD:13792537
G LOC103690302 AF4/FMR2 family member 2 RGD:13792537
G Mbnl1 muscleblind-like splicing regulator 1 JBrowse link 2 150,698,248 150,867,791 RGD:1624291
G Mbnl2 muscleblind-like splicing regulator 2 JBrowse link 15 105,640,097 105,797,933 RGD:1624291
G Mbnl3 muscleblind-like splicing regulator 3 JBrowse link X 138,378,674 138,473,365 RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
G Pqbp1 polyglutamine binding protein 1 JBrowse link X 15,448,570 15,453,130 RGD:1624291
RGD:1600115
G Prx periaxin JBrowse link 1 84,302,074 84,324,560 RGD:1624291
RGD:13792537
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:13792537
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 2 223,261,444 223,323,075 RGD:13792537
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 5 76,670,074 76,756,196 RGD:13792537
G Rbfox2 RNA binding fox-1 homolog 2 JBrowse link 7 118,157,093 118,396,733 RGD:1600115
G Rbm20 RNA binding motif protein 20 JBrowse link 1 274,391,932 274,589,816 RGD:13792537
G Rbm38 RNA binding motif protein 38 JBrowse link 3 171,037,891 171,050,500 RGD:1624291
G Rrp1b ribosomal RNA processing 1B JBrowse link 20 10,844,234 10,869,830 RGD:1624291
G Smptb polypyrimidine tract-binding protein JBrowse link X 17,484,839 17,486,721 RGD:13792537
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:1624291
RGD:1600115
G Son SON DNA and RNA binding protein JBrowse link 11 31,806,598 31,837,769 RGD:1624291
G Srrm4 serine/arginine repetitive matrix 4 JBrowse link 12 45,726,192 45,884,644 RGD:1624291
RGD:13792537
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1624291
G Zfp326 zinc finger protein 326 JBrowse link 14
14
4,998,530
5,016,764
5,006,759
5,036,663
RGD:1624291
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acin1 apoptotic chromatin condensation inducer 1 JBrowse link 15 33,288,369 33,333,256 RGD:1624291
G Akr1c1 aldo-keto reductase family 1, member C1 JBrowse link 17 69,441,253 69,460,334 RGD:1624291
G C1qbp complement C1q binding protein JBrowse link 10 57,613,876 57,618,527 RGD:1624291
RGD:13792537
RGD:1600115
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 17,689,090 18,079,835 RGD:1624291
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A JBrowse link 11 34,858,339 34,958,733 RGD:1624291
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:1624291
RGD:1600115
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:1624291
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:9999428
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:1624291
G Pcbp4 poly(rC) binding protein 4 JBrowse link 8 115,154,848 115,165,706 RGD:1624291
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:1624291
RGD:13792537
RGD:1600115
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 5 76,670,074 76,756,196 RGD:1624291
RGD:13792537
G Rbm10 RNA binding motif protein 10 JBrowse link X 1,754,869 1,786,973 RGD:1624291
RGD:1600115
G Rbm42 RNA binding motif protein 42 JBrowse link 1 89,099,296 89,109,248 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:8554197
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 10 13,786,339 13,796,720 RGD:1624291
RGD:1600115
G Sap18 Sin3A associated protein 18 JBrowse link 15 38,069,320 38,073,625 RGD:1624291
G Sfswap splicing factor SWAP JBrowse link 12 30,740,563 30,811,015 RGD:8554197
G Smptb polypyrimidine tract-binding protein JBrowse link X 17,484,839 17,486,721 RGD:13792537
G Srsf10 serine and arginine rich splicing factor 10 JBrowse link 5 154,205,358 154,219,550 RGD:1624291
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:1624291
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:1624291
G Srsf7 serine and arginine rich splicing factor 7 JBrowse link 6 2,879,312 2,886,505 RGD:1624291
G Srsf9 serine and arginine rich splicing factor 9 JBrowse link 12 47,039,714 47,046,022 RGD:1624291
RGD:1600115
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1624291
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link 1 72,312,260 72,329,828 RGD:1624291
negative regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:2313309
G LOC100361854 ribosomal protein S26-like JBrowse link X 115,495,660 115,496,062 RGD:1624291
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:1624291
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 2 223,261,444 223,323,075 RGD:10045970
RGD:13792537
RGD:1624291
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 5 76,670,074 76,756,196 RGD:1600115
RGD:1624291
G Rps13 ribosomal protein S13 JBrowse link 1 185,328,902 185,331,332 RGD:1624291
G Tmbim6 transmembrane BAX inhibitor motif containing 6 JBrowse link 7 141,039,433 141,070,269 RGD:1600115
RGD:1624291
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07061152.1 RGD:13792537
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 2 195,716,373 195,732,872 RGD:1624291
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 17,689,090 18,079,835 RGD:1624291
G Cirbp cold inducible RNA binding protein JBrowse link 7 12,400,066 12,405,054 RGD:13792537
G Dazap1 DAZ associated protein 1 JBrowse link 7 12,289,895 12,315,897 RGD:1624291
RGD:13792537
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:1624291
G Hmx2 H6 family homeobox 2 JBrowse link 1 203,515,605 203,523,266 RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1624291
G Lmntd2 lamin tail domain containing 2 JBrowse link 1 214,197,126 214,202,828 RGD:1624291
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 5 61,734,118 61,767,098 RGD:1624291
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:13792537
G Nup98 nucleoporin 98 and 96 precursor JBrowse link 1 167,213,866 167,308,851 RGD:1624291
RGD:1600115
G Obi1 ORC ubiquitin ligase 1 JBrowse link 15 88,632,089 88,670,325 RGD:1624291
G Prdx6 peroxiredoxin 6 JBrowse link 13 79,077,567 79,088,113 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
G Rbm3 RNA binding motif protein 3 JBrowse link X 15,098,880 15,102,344 RGD:13792537
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:13792537
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:2316827
RGD:13792537
G Rbmxl1b RNA binding motif protein, X-linked-like 1B JBrowse link 4 42,186,612 42,188,294 RGD:13792537
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J JBrowse link Y 380,337 390,669 RGD:13792537
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 2 198,312,428 198,317,180 RGD:1624291
RGD:13792537
G Slc39a5 solute carrier family 39 member 5 JBrowse link 7 2,813,875 2,819,917 RGD:1624291
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:1624291
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link 5 144,178,248 144,221,318 RGD:1624291
RGD:1600115
G Tra2a transformer 2 alpha homolog JBrowse link 4 78,905,380 78,924,203 RGD:1624291
RGD:13792537
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1624291
RGD:13792537
RGD:1600115
G Zfp64 zinc finger protein 64 JBrowse link 3 165,713,070 165,741,932 RGD:1624291
positive regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A JBrowse link 11 34,858,339 34,958,733 RGD:1624291
RGD:13464257
G Ern1 endoplasmic reticulum to nucleus signaling 1 JBrowse link 10 94,588,555 94,682,072 RGD:1624291
G Habp4 hyaluronan binding protein 4 JBrowse link 17 1,679,561 1,702,245 RGD:1624291
RGD:1600115
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:10002775
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like JBrowse link 6 2,698,983 2,729,715 RGD:1624291
RGD:13792537
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:1624291
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1624291
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 JBrowse link 7 110,031,819 110,179,475 RGD:632715
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:1600115
RGD:1624291
G Polr2a RNA polymerase II subunit A JBrowse link 10 56,339,277 56,364,888 RGD:1624291
G Rbm20 RNA binding motif protein 20 JBrowse link 1 274,391,932 274,589,816 RGD:7241566
RGD:13792537
RGD:1624291
G Rbm22 RNA binding motif protein 22 JBrowse link 18 55,828,158 55,839,421 RGD:1624291
RGD:1600115
G Setx senataxin JBrowse link 3 7,680,430 7,731,815 RGD:1624291
G Slc38a2 solute carrier family 38, member 2 JBrowse link 7 138,088,654 138,100,869 RGD:1624291
RGD:1600115
G Smn1 survival of motor neuron 1, telomeric JBrowse link 2 30,360,101 30,371,147 RGD:1624291
RGD:1600115
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:11038784
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:11039429
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link 1 72,312,260 72,329,828 RGD:1624291
G Zpr1 ZPR1 zinc finger JBrowse link 8 50,563,047 50,572,621 RGD:1624291
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07051190.1 RGD:13792537
G AABR07055789.1 RGD:13792537
G Celf1 CUGBP, Elav-like family member 1 JBrowse link 3 79,768,900 79,844,548 RGD:13792537
G Celf2 CUGBP, Elav-like family member 2 JBrowse link 17 75,259,269 75,660,154 RGD:13792537
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 2 195,716,373 195,732,872 RGD:1624291
RGD:13792537
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 17,689,090 18,079,835 RGD:1624291
RGD:13792537
G Celf5 CUGBP, Elav-like family member 5 JBrowse link 7 11,095,449 11,119,941 RGD:1624291
RGD:13792537
G Celf6 CUGBP, Elav-like family member 6 JBrowse link 8 64,364,491 64,428,452 RGD:1624291
RGD:13792537
G Ddx17 DEAD-box helicase 17 JBrowse link 7 120,761,843 120,765,012 RGD:1624291
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:1624291
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A JBrowse link 11 34,858,339 34,958,733 RGD:8554210
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:1600115
G Fam172a family with sequence similarity 172, member A JBrowse link 2 4,942,795 5,547,744 RGD:1624291
G Fblim1 filamin binding LIM protein 1 JBrowse link 5 160,122,466 160,158,921 RGD:1600115
RGD:13792537
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:13792537
RGD:1624291
G Fxr1 FMR1 autosomal homolog 1 JBrowse link 2 120,529,716 120,570,356 RGD:13792537
G Fxr2 FMR1 autosomal homolog 2 JBrowse link 10 56,237,814 56,257,877 RGD:13792537
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:1624291
RGD:1600115
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:1624291
RGD:13792537
RGD:1600115
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1600115
RGD:13792537
RGD:1624291
G Ik IK cytokine JBrowse link 18 29,587,901 29,602,705 RGD:13792537
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 JBrowse link 5 147,927,145 147,953,093 RGD:1600115
RGD:1624291
G LOC108348453 calsequestrin-1-like JBrowse link 16 6,440,153 6,467,211 RGD:13792537
G Magoh mago homolog, exon junction complex subunit JBrowse link 5 127,480,465 127,487,617 RGD:1624291
RGD:1600115
G Mbnl1 muscleblind-like splicing regulator 1 JBrowse link 2 150,698,248 150,867,791 RGD:13792537
G Mbnl2 muscleblind-like splicing regulator 2 JBrowse link 15 105,640,097 105,797,933 RGD:1624291
RGD:13792537
G Mbnl3 muscleblind-like splicing regulator 3 JBrowse link X 138,378,674 138,473,365 RGD:13792537
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:8553451
RGD:1600115
G Nsrp1 nuclear speckle splicing regulatory protein 1 JBrowse link 10 63,098,115 63,131,779 RGD:1624291
RGD:1600115
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:1600115
RGD:1624291
G Rbfox1 RNA binding fox-1 homolog 1 JBrowse link 10 8,312,961 10,437,778 RGD:1624291
RGD:13792537
G Rbfox2 RNA binding fox-1 homolog 2 JBrowse link 7 118,157,093 118,396,733 RGD:1624291
RGD:13792537
G Rbfox3 RNA binding fox-1 homolog 3 JBrowse link 10 107,517,916 107,850,764 RGD:1624291
RGD:13792537
G Rbm10 RNA binding motif protein 10 JBrowse link X 1,754,869 1,786,973 RGD:1600115
G Rbm11 RNA binding motif protein 11 JBrowse link 11 14,005,704 14,015,723 RGD:1624291
RGD:13792537
G Rbm15 RNA binding motif protein 15 JBrowse link 2 210,079,678 210,090,200 RGD:1624291
G Rbm15b RNA binding motif protein 15B JBrowse link 8 115,618,242 115,623,068 RGD:1624291
RGD:13792537
G Rbm17 RNA binding motif protein 17 JBrowse link 17 70,586,345 70,603,289 RGD:13792537
G Rbm19 RNA binding motif protein 19 JBrowse link 12 41,907,978 41,993,969 RGD:13792537
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
G Rbm25 RNA binding motif protein 25 JBrowse link 6 107,117,888 107,165,538 RGD:1624291
G Rbm25l1 RNA binding motif protein 25-like 1 JBrowse link 10 10,457,316 10,460,540 RGD:13792537
G Rbm4 RNA binding motif protein 4 JBrowse link 1 220,038,403 220,049,756 RGD:1624291
G Rbm4b RNA binding motif protein 4B JBrowse link 1 220,009,397 220,019,488 RGD:13792537
G Rbm5 RNA binding motif protein 5 JBrowse link 8 116,502,941 116,532,178 RGD:1600115
RGD:1624291
G Rbm7 RNA binding motif protein 7 JBrowse link 8 52,823,094 52,828,134 RGD:13792537
G Rbm8a RNA binding motif protein 8A JBrowse link 2 198,755,261 198,758,028 RGD:1624291
RGD:13792537
RGD:1600115
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:2316827
G Rest RE1-silencing transcription factor JBrowse link 14 33,131,985 33,152,019 RGD:1600115
RGD:1624291
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 10 13,786,339 13,796,720 RGD:1624291
RGD:13792537
RGD:1600115
G Sap18 Sin3A associated protein 18 JBrowse link 15 38,069,320 38,073,625 RGD:1624291
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein JBrowse link 12 48,628,198 48,656,096 RGD:13792537
G Smu1 SMU1, DNA replication regulator and spliceosomal factor JBrowse link 5 57,042,301 57,061,379 RGD:1600115
G Srek1 splicing regulatory glutamic acid and lysine rich protein 1 JBrowse link 2 33,806,035 33,841,594 RGD:1600115
G Srrm4 serine/arginine repetitive matrix 4 JBrowse link 12 45,726,192 45,884,644 RGD:1624291
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:13792537
G Srsf10 serine and arginine rich splicing factor 10 JBrowse link 5 154,205,358 154,219,550 RGD:13792537
G Srsf12 serine and arginine rich splicing factor 12 JBrowse link 5 48,456,777 48,484,017 RGD:1624291
RGD:13792537
G Srsf2 serine and arginine rich splicing factor 2 JBrowse link 10 105,792,779 105,795,986 RGD:1624291
RGD:13792537
G Srsf3 serine and arginine rich splicing factor 3 JBrowse link 20 6,288,285 6,298,218 RGD:13792537
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:13792537
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:13792537
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:1600115
RGD:13792537
RGD:1624291
G Srsf7 serine and arginine rich splicing factor 7 JBrowse link 6 2,879,312 2,886,505 RGD:13792537
G Srsf8 serine and arginine rich splicing factor 8 JBrowse link X
X
49,529,525
49,644,973
49,530,166
49,705,870
RGD:13792537
G Srsf9 serine and arginine rich splicing factor 9 JBrowse link 12 47,039,714 47,046,022 RGD:13792537
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link 5 144,178,248 144,221,318 RGD:1624291
RGD:1600115
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1600115
RGD:1624291
G Wtap WT1 associated protein JBrowse link 1 47,942,500 47,967,633 RGD:1624291
RGD:13792537
G Ythdc1 YTH domain containing 1 JBrowse link 14 22,971,834 23,002,326 RGD:1624291
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 7 11,429,266 11,446,119 RGD:1600115
RGD:1624291
G Zc3h10 zinc finger CCCH type containing 10 JBrowse link 7 2,968,428 2,972,521 RGD:13792537
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase JBrowse link 10 105,781,752 105,787,803 RGD:1624291
RGD:1600115
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 JBrowse link 5 147,927,145 147,953,093 RGD:1624291
RGD:13792537
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 JBrowse link 9 39,501,431 40,008,707 RGD:1624291
RGD:13792537
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 JBrowse link 7 110,031,819 110,179,475 RGD:1600115
RGD:13792537
RGD:1624291
G Mettl16 methyltransferase like 16 JBrowse link 10 61,626,595 61,682,947 RGD:1624291
RGD:1600115
G Rbm42 RNA binding motif protein 42 JBrowse link 1 89,099,296 89,109,248 RGD:13792537
G RGD1305178 similar to Hypothetical protein MGC11690 JBrowse link 3 9,813,914 9,822,222 RGD:13792537
G Son SON DNA and RNA binding protein JBrowse link 11 31,806,598 31,837,769 RGD:1624291
RGD:13792537
G Srsf10 serine and arginine rich splicing factor 10 JBrowse link 5 154,205,358 154,219,550 RGD:1624291
G Srsf3 serine and arginine rich splicing factor 3 JBrowse link 20 6,288,285 6,298,218 RGD:1624291
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein JBrowse link 4 118,207,845 118,238,246 RGD:1624291
G Ythdc1 YTH domain containing 1 JBrowse link 14 22,971,834 23,002,326 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19336
    metabolic process 11555
      regulation of metabolic process 6536
        regulation of macromolecule metabolic process 6017
          regulation of gene expression 4226
            regulation of RNA splicing 152
              negative regulation of RNA splicing + 31
              positive regulation of RNA splicing + 47
              regulation of mRNA splicing, via spliceosome + 113
Path 2
Term Annotations click to browse term
  biological_process 19336
    metabolic process 11555
      cellular metabolic process 10567
        cellular aromatic compound metabolic process 5482
          nucleobase-containing compound metabolic process 5256
            nucleic acid metabolic process 4768
              RNA metabolic process 4280
                RNA processing 859
                  RNA splicing 361
                    regulation of RNA splicing 152
                      negative regulation of RNA splicing + 31
                      positive regulation of RNA splicing + 47
                      regulation of mRNA splicing, via spliceosome + 113
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.