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ONTOLOGY REPORT - ANNOTATIONS


Term:peroxisomal transport
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Accession:GO:0043574 term browser browse the term
Definition:Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.


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long-chain fatty acid import into peroxisome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO
IBA
ISS
UniProtKB:P34230 (PMID:18757502)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18757502, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:11883951, PMID:21873635 RGD:1358265, RGD:13792537 NCBI chr 2:225,335,708...225,389,120
Ensembl chr 2:225,335,718...225,389,120
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,315,026...108,329,550
Ensembl chr 6:108,315,035...108,329,464
JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC108348326 peroxisome assembly protein 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:70,512,790...70,516,421 JBrowse link
G Lonp2 lon peptidase 2, peroxisomal IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:21,400,736...21,492,634
Ensembl chr19:21,400,740...21,492,556
JBrowse link
G Pex1 peroxisomal biogenesis factor 1 ISO
IBA
(PMID:9398847)
PMID:21873635
RGD PMID:9398847, PMID:21873635 RGD:13792537 NCBI chr 4:27,659,376...27,698,037
Ensembl chr 4:27,659,381...27,698,037
JBrowse link
G Pex10 peroxisomal biogenesis factor 10 ISO
IBA
(PMID:10862081), (PMID:9683594)
PMID:21873635
RGD PMID:9683594, PMID:10862081, PMID:21873635 RGD:13792537 NCBI chr 5:172,469,978...172,475,144
Ensembl chr 5:172,469,978...172,475,144
JBrowse link
G Pex12 peroxisomal biogenesis factor 12 ISO
IBA
(PMID:10562279), (PMID:9090384)
PMID:21873635
RGD PMID:9090384, PMID:10562279, PMID:21873635 RGD:13792537 NCBI chr10:70,512,785...70,516,494
Ensembl chr10:70,512,790...70,516,421
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 ISO (PMID:15146459) RGD PMID:15146459 NCBI chr 5:165,782,895...165,918,445
Ensembl chr 5:165,782,895...165,918,445
JBrowse link
G Pex16 peroxisomal biogenesis factor 16 ISO (PMID:9922452) RGD PMID:9922452 NCBI chr 3:81,283,137...81,292,575
Ensembl chr 3:81,283,137...81,292,573
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 ISO (PMID:10528859) RGD PMID:10528859 NCBI chr 2:98,251,756...98,269,185
Ensembl chr 2:98,252,925...98,269,184
JBrowse link
G Pex26 peroxisomal biogenesis factor 26 ISO
IBA
(PMID:15858711), (PMID:16257970)
PMID:21873635
RGD PMID:15858711, PMID:16257970, PMID:21873635 RGD:13792537 NCBI chr 4:153,747,715...153,760,446
Ensembl chr 4:153,747,947...153,760,442
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO UniProtKB:O09012 (PMID:11463335), (PMID:11931631), (PMID:18346465)
(MGI:5442515|PMID:11463335)
RGD PMID:11463335, PMID:11931631, PMID:18346465 MGI:5442515 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:16,568,743...16,580,900
Ensembl chr 9:16,566,688...16,581,078
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 ISO
IBA
(PMID:12522768), (PMID:9090381)
(MGI:1289107|PMID:9090381)
PMID:21873635
RGD PMID:9090381, PMID:12522768, PMID:21873635 MGI:1289107, RGD:13792537 NCBI chr 1:15,311,768...15,374,702
Ensembl chr 1:15,311,770...15,374,850
JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103690024 peroxisomal targeting signal 1 receptor-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:156,403,016...156,428,237
Ensembl chr 4:156,403,016...156,427,755
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 ISO
IBA
(PMID:8858165)
MGI:2384515 (MGI:2670243|PMID:12897163)
PMID:21873635
RGD PMID:8858165, PMID:12897163, PMID:21873635 MGI:2670243, RGD:13792537 NCBI chr14:108,394,299...108,411,994
Ensembl chr14:108,394,303...108,412,823
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,782,895...165,918,445
Ensembl chr 5:165,782,895...165,918,445
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO
IBA
(PMID:21976670)
PMID:21873635
RGD PMID:21976670, PMID:21873635 RGD:13792537 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Pex5l peroxisomal biogenesis factor 5-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,330,330...119,405,809
Ensembl chr 2:119,330,080...119,537,837
JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 ISO (PMID:21976670) RGD PMID:21976670 NCBI chr 5:165,782,895...165,918,445
Ensembl chr 5:165,782,895...165,918,445
JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 ISO (PMID:21525035) RGD PMID:21525035 NCBI chr 5:165,782,895...165,918,445
Ensembl chr 5:165,782,895...165,918,445
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO (PMID:11336669), (PMID:7719337) RGD PMID:7719337, PMID:11336669 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 ISO (PMID:8670792) RGD PMID:8670792 NCBI chr 9:16,568,743...16,580,900
Ensembl chr 9:16,566,688...16,581,078
JBrowse link
protein import into peroxisome membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex16 peroxisomal biogenesis factor 16 ISO (PMID:12223482) RGD PMID:12223482 NCBI chr 3:81,283,137...81,292,575
Ensembl chr 3:81,283,137...81,292,573
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 ISO
IBA
(PMID:11402059), (PMID:14709540)
PMID:21873635
RGD PMID:11402059, PMID:14709540, PMID:21873635 RGD:13792537 NCBI chr13:90,514,324...90,530,825
Ensembl chr13:90,514,336...90,530,349
JBrowse link
G Pex26 peroxisomal biogenesis factor 26 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:153,747,715...153,760,446
Ensembl chr 4:153,747,947...153,760,442
JBrowse link
G Pex3 peroxisomal biogenesis factor 3 ISO
IBA
(PMID:15007061)
PMID:21873635
RGD PMID:15007061, PMID:21873635 RGD:13792537 NCBI chr 1:7,685,209...7,726,238
Ensembl chr 1:7,685,338...7,726,401
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO (PMID:14709540) RGD PMID:14709540 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Rab8b RAB8B, member RAS oncogene family ISO (PMID:18346465) RGD PMID:18346465 NCBI chr 8:72,641,680...72,714,646
Ensembl chr 8:72,638,003...72,714,664
JBrowse link
protein targeting to peroxisome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 ISO
ISS
(PMID:10468558)
GO_REF:0000024
RGD
UniProt
PMID:10468558 GO_REF:0000024 NCBI chr16:7,720,047...7,758,119
Ensembl chr16:7,714,465...7,758,189
JBrowse link
G Lonp2 lon peptidase 2, peroxisomal ISO
IBA
(PMID:18281296)
PMID:21873635
RGD PMID:18281296, PMID:21873635 RGD:13792537 NCBI chr19:21,400,736...21,492,634
Ensembl chr19:21,400,740...21,492,556
JBrowse link
G Pex1 peroxisomal biogenesis factor 1 ISO (PMID:11439091), (PMID:16854980) RGD PMID:11439091, PMID:16854980 NCBI chr 4:27,659,376...27,698,037
Ensembl chr 4:27,659,381...27,698,037
JBrowse link
G Pex16 peroxisomal biogenesis factor 16 ISO (PMID:9837814) RGD PMID:9837814 NCBI chr 3:81,283,137...81,292,575
Ensembl chr 3:81,283,137...81,292,573
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 ISO (PMID:10704444), (PMID:16344115), (PMID:16763195), (PMID:19114594) RGD PMID:10704444, PMID:16344115, PMID:16763195, PMID:19114594 NCBI chr13:90,514,324...90,530,825
Ensembl chr13:90,514,336...90,530,349
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO (PMID:21375735), (PMID:9668159) RGD PMID:9668159, PMID:21375735 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 ISO
IBA
(PMID:16854980)
PMID:21873635
RGD PMID:16854980, PMID:21873635 RGD:13792537 NCBI chr 9:16,568,743...16,580,900
Ensembl chr 9:16,566,688...16,581,078
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 ISO MGI:3052739 (MGI:3052413|PMID:12915479) RGD PMID:12915479 MGI:3052413 NCBI chr 1:15,311,768...15,374,702
Ensembl chr 1:15,311,770...15,374,850
JBrowse link
G Zfand6 zinc finger AN1-type containing 6 ISS
ISO
IBA
GO_REF:0000024
(MGI:5427069|PMID:21980954)
PMID:21873635
UniProt
RGD
PMID:21980954, PMID:21873635 GO_REF:0000024, MGI:5427069, RGD:13792537 NCBI chr 1:146,745,850...146,823,762
Ensembl chr 1:146,745,859...146,823,762
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      cellular localization 2966
        intracellular transport 1514
          peroxisomal transport 24
            peroxisomal membrane transport + 22
            protein targeting to peroxisome + 20
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular localization 2966
        establishment of localization in cell 2177
          intracellular transport 1514
            peroxisomal transport 24
              peroxisomal membrane transport + 22
              protein targeting to peroxisome + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.