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ONTOLOGY REPORT - ANNOTATIONS


Term:tongue development
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Accession:GO:0043586 term browser browse the term
Definition:The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.
Synonyms:narrow_synonym: glossa development;   lingua development


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tongue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnc2 basonuclin 2 ISO MGI:MGI:3639337 (MGI:MGI:4355754|PMID:19706529) RGD PMID:19706529 MGI:MGI:4355754 NCBI chr 5:102,407,508...102,807,389
Ensembl chr 5:102,415,847...102,786,331
JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:10908606 RGD:2289970 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:10908606 RGD:2289970 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:10908606 RGD:2289970 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:3809315|PMID:18816854) RGD PMID:18816854 MGI:MGI:3809315 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO
IEA
MGI:MGI:3715149 (MGI:MGI:3714871|PMID:17531968)
GO_REF:0000107
RGD
Ensembl
PMID:17531968 GO_REF:0000107, MGI:MGI:3714871 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 IEP RGD PMID:15365256 RGD:7243961 NCBI chr11:32,434,786...32,447,264
Ensembl chr11:32,440,237...32,447,259
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IEP RGD PMID:10908606 RGD:2289970 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
MGI:MGI:1926601 (MGI:MGI:3703195|PMID:17284610)
GO_REF:0000107
RGD
Ensembl
PMID:17284610 GO_REF:0000107, MGI:MGI:3703195 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nkx2-6 NK2 homeobox 6 ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
G Prdm16 PR/SET domain 16 ISO MGI:MGI:3576024 (MGI:MGI:4430027|PMID:20007998) RGD PMID:20007998 MGI:MGI:4430027 NCBI chr 5:171,662,277...171,711,561
Ensembl chr 5:171,662,277...171,710,316
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:MGI:5448822 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:MGI:5448822 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:MGI:3589809 (MGI:MGI:3664123|PMID:17015430) RGD PMID:17015430 MGI:MGI:3664123 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Wnt10a Wnt family member 10A ISO (PMID:17847007), (PMID:19559398) RGD PMID:17847007, PMID:19559398 NCBI chr 9:82,053,581...82,066,047
Ensembl chr 9:82,053,581...82,066,047
JBrowse link
fungiform papilla development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:MGI:3582610 (MGI:MGI:3703195|PMID:17284610) RGD PMID:17284610 MGI:MGI:3703195 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
fungiform papilla formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:3696593|PMID:17128274)
GO_REF:0000107
RGD
Ensembl
PMID:17128274 GO_REF:0000107, MGI:MGI:3696593 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:P70288 (MGI:MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:MGI:4889029 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:O09106 (MGI:MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:MGI:4889029 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
fungiform papilla morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:MGI:5448822 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:MGI:5448822 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
taste bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor ISO MGI:MGI:1857136 (MGI:MGI:5553205|PMID:24378336) RGD PMID:24378336 MGI:MGI:5553205 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Ntf4 neurotrophin 4 ISO (MGI:MGI:5553205|PMID:24378336) RGD PMID:24378336 MGI:MGI:5553205 NCBI chr 1:101,405,314...101,408,145
Ensembl chr 1:101,405,314...101,408,145
JBrowse link
tongue morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:16828469 RGD:2289002 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 ISO (MGI:MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:MGI:3809313 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Fuz fuzzy planar cell polarity protein ISO MGI:MGI:3531090 (MGI:MGI:5912570|PMID:27158779) RGD PMID:27158779 MGI:MGI:5912570 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Hoxc13 homeobox C13 ISO MGI:MGI:1926422 (MGI:MGI:1195385|PMID:9420327) RGD PMID:9420327 MGI:MGI:1195385 NCBI chr 7:144,531,814...144,538,298
Ensembl chr 7:144,531,814...144,537,966
JBrowse link
G Intu inturned planar cell polarity protein ISO
IEA
(PMID:27158779)
GO_REF:0000107
RGD
Ensembl
PMID:27158779 GO_REF:0000107 NCBI chr 2:127,589,325...127,611,705
Ensembl chr 2:127,459,012...127,525,437
JBrowse link
G Krt13 keratin 13 IEP RGD PMID:16271699 RGD:1600171 NCBI chr10:88,032,130...88,036,040
Ensembl chr10:88,032,130...88,036,040
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
(MGI:MGI:3809313|PMID:18816858)
GO_REF:0000024
RGD
UniProt
PMID:18816858 GO_REF:0000024, MGI:MGI:3809313 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO
IEA
(PMID:27158779)
MGI:MGI:5558100 (MGI:MGI:5912570|PMID:27158779)
GO_REF:0000107
RGD
Ensembl
PMID:27158779 GO_REF:0000107, MGI:MGI:5912570 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        animal organ development 4027
          sensory organ development 693
            tongue development 30
              fungiform papilla development + 7
              taste bud development + 2
              tongue morphogenesis + 14
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            animal organ development 4027
              sensory organ development 693
                tongue development 30
                  fungiform papilla development + 7
                  taste bud development + 2
                  tongue morphogenesis + 14
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.