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ONTOLOGY REPORT - ANNOTATIONS


Term:recognition of apoptotic cell
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Accession:GO:0043654 term browser browse the term
Definition:The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.
Synonyms:exact_synonym: detection of apoptotic cell;   detection of apoptotic cell corpse;   detection of cell corpse;   recognition of apoptotic cell corpse;   recognition of cell corpse


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recognition of apoptotic cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCN1 ficolin 1 ISO (PMID:15804047) UniProtKB PMID:15804047 NCBI chr 9:106,039,315...106,047,648 JBrowse link
G FCN2 ficolin 2 ISO (PMID:15804047) UniProtKB PMID:15804047 NCBI chr 9:105,995,807...106,020,389
Ensembl chr 9:134,997,038...135,018,992
JBrowse link
G FCN3 ficolin 3 ISO (PMID:15804047) UniProtKB PMID:15804047 NCBI chr 1:26,620,373...26,636,424
Ensembl chr 1:27,676,866...27,683,861
JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO (MGI:1855743|PMID:10811223)
(MGI:2682078|PMID:14645847)
MGI PMID:10811223, PMID:14645847 MGI:1855743, MGI:2682078 NCBI chr17:70,789,922...70,803,791
Ensembl chr17:76,356,142...76,370,117
JBrowse link
G MEGF10 multiple EGF like domains 10 ISO (MGI:4414741|PMID:19915564) MGI PMID:19915564 MGI:4414741 NCBI chr 5:122,639,155...122,877,324
Ensembl chr 5:128,466,095...128,641,043
JBrowse link
G PEAR1 platelet endothelial aggregation receptor 1 ISO (MGI:4414741|PMID:19915564) MGI PMID:19915564 MGI:4414741 NCBI chr 1:132,236,550...132,259,273
Ensembl chr 1:136,069,341...136,080,165
JBrowse link
G SCARB1 scavenger receptor class B member 1 ISO PMID:12016218
(PMID:9211901)
BHF-UCL PMID:9211901, PMID:12016218 RGD:1304245 NCBI chr12:122,293,803...122,455,314 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    cellular process 11671
      cell recognition 119
        phagocytosis, recognition 18
          recognition of apoptotic cell 7
Path 2
Term Annotations click to browse term
  biological_process 12566
    localization 4923
      establishment of localization 3510
        transport 3358
          vesicle-mediated transport 1147
            phagocytosis 189
              apoptotic cell clearance 38
                recognition of apoptotic cell 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.