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ONTOLOGY REPORT - ANNOTATIONS


Term:recognition of apoptotic cell
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Accession:GO:0043654 term browser browse the term
Definition:The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.
Synonyms:exact_synonym: detection of apoptotic cell;   detection of apoptotic cell corpse;   detection of cell corpse;   recognition of apoptotic cell corpse;   recognition of cell corpse


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recognition of apoptotic cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A ISO (PMID:15804047) UniProtKB PMID:15804047 NCBI chr 2:25,624,665...25,635,440
Ensembl chr 2:25,624,666...25,628,030
JBrowse link
G Fcnb ficolin B ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 2:28,076,479...28,084,910
Ensembl chr 2:28,076,378...28,084,885
JBrowse link
G Jmjd6 jumonji domain containing 6 IDA
IMP
(MGI:1855743|PMID:10811223)
(MGI:2682078|PMID:14645847)
MGI PMID:10811223, PMID:14645847 MGI:1855743, MGI:2682078 NCBI chr11:116,837,432...116,843,767
Ensembl chr11:116,837,432...116,843,449
JBrowse link
G Megf10 multiple EGF-like-domains 10 IMP
IDA
(MGI:4414741|PMID:19915564) MGI PMID:19915564 MGI:4414741 NCBI chr18:57,133,090...57,297,467
Ensembl chr18:57,133,090...57,297,467
JBrowse link
G Pear1 platelet endothelial aggregation receptor 1 IMP
IDA
(MGI:4414741|PMID:19915564) MGI PMID:19915564 MGI:4414741 NCBI chr 3:87,749,097...87,769,110
Ensembl chr 3:87,747,890...87,824,306
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
IBA
ISS
(MGI:6201960|PMID:21873635)
(MGI:894255|PMID:9211901)
MGI
GO_Central
BHF-UCL
PMID:9211901, PMID:21873635 GO_REF:0000096, MGI:4417868, MGI:4834177, MGI:6201960, MGI:894255 NCBI chr 5:125,277,087...125,341,094
Ensembl chr 5:125,277,087...125,341,094
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    cellular process 17420
      cell recognition 280
        phagocytosis, recognition 147
          recognition of apoptotic cell 6
Path 2
Term Annotations click to browse term
  biological_process 23386
    localization 6231
      establishment of localization 4672
        transport 4521
          vesicle-mediated transport 1607
            phagocytosis 364
              apoptotic cell clearance 52
                recognition of apoptotic cell 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.