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ONTOLOGY REPORT - ANNOTATIONS


Term:recognition of apoptotic cell
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Accession:GO:0043654 term browser browse the term
Definition:The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.
Synonyms:exact_synonym: detection of apoptotic cell;   detection of apoptotic cell corpse;   detection of cell corpse;   recognition of apoptotic cell corpse;   recognition of cell corpse


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recognition of apoptotic cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Fcnb ficolin B ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO MGI:2686850 (MGI:1855743|PMID:10811223), (MGI:2682078|PMID:14645847) RGD PMID:10811223, PMID:14645847 MGI:1855743, MGI:2682078 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
JBrowse link
G Megf10 multiple EGF-like domains 10 ISO (MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:4414741 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Pear1 platelet endothelial aggregation receptor 1 ISO (MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:4414741 NCBI chr 2:187,114,219...187,134,209
Ensembl chr 2:187,114,217...187,133,993
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
ISS
IDA
(PMID:9211901)
GO_REF:0000024
PMID:12016218
RGD
BHF-UCL
PMID:9211901, PMID:12016218 GO_REF:0000024, RGD:1304245 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cell recognition 261
        phagocytosis, recognition 134
          recognition of apoptotic cell 6
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          vesicle-mediated transport 1674
            phagocytosis 350
              apoptotic cell clearance 52
                recognition of apoptotic cell 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.