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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of symbiotic process
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Accession:GO:0043903 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.
Comment:regulation of interspecies interactions between organisms
Synonyms:broad_synonym: regulation of interspecies interactions between organisms
 related_synonym: regulation of symbiosis, encompassing mutualism through parasitism


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intracellular transport of viral protein in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link NW_004955439 3,833,525 3,842,393 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
modulation by host of viral RNA genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxl2 F-box and leucine rich repeat protein 2 JBrowse link NW_004955421 512,197 617,524 RGD:9068941
G Fmr1 FMRP translational regulator 1 JBrowse link NW_004955498 566,741 594,837 RGD:9068941
G Phb prohibitin JBrowse link NW_004955451 12,110,290 12,119,870 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link NW_004955406 41,412,855 41,448,551 RGD:9068941
modulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psmc3 proteasome 26S subunit, ATPase 3 JBrowse link NW_004955422 837,934 843,161 RGD:9068941
negative regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnk cyclin K JBrowse link NW_004955438 20,826,818 20,850,496 RGD:9068941
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link NW_004955555 426,894 446,235 RGD:9068941
G Ddx3x DEAD-box helicase 3 X-linked JBrowse link NW_004955565 1,387,043 1,403,624 RGD:9068941
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link NW_004955416 6,897,897 7,005,602 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Vapa VAMP associated protein A JBrowse link NW_004955402 2,274,248 2,309,461 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004955468 11,388,154 11,389,259 RGD:9068941
G Ptx3 pentraxin 3 JBrowse link NW_004955448 8,366,795 8,373,010 RGD:9068941
negative regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link NW_004955555 426,894 446,235 RGD:9068941
G Ltf lactotransferrin JBrowse link NW_004955420 25,580,449 25,604,277 RGD:9068941
negative regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
negative regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl5 C-C motif chemokine ligand 5 JBrowse link NW_004955481 10,293,758 10,301,118 RGD:9068941
G Hdac1 histone deacetylase 1 JBrowse link NW_004955452 10,636,366 10,668,873 RGD:9068941
G Hmga2 high mobility group AT-hook 2 JBrowse link NW_004955458 12,493,790 12,624,805 RGD:9068941
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link NW_004955481 1,651,422 1,674,402 RGD:9068941
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955464 1,107,598 1,110,326 RGD:9068941
G Pou2f3 POU class 2 homeobox 3 JBrowse link NW_004955412 21,261,389 21,339,602 RGD:9068941
G Tardbp TAR DNA binding protein JBrowse link NW_004955486 2,656,121 2,674,808 RGD:9068941
G Tfap4 transcription factor AP-4 JBrowse link NW_004955442 13,160,467 13,174,288 RGD:9068941
G Znf639 zinc finger protein 639 JBrowse link NW_004955420 8,513,192 8,522,689 RGD:9068941
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
negative regulation of cytolysis by symbiont of host cells term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Krt6a keratin 6A JBrowse link NW_004955547 2,902,962 2,907,670 RGD:9068941
negative regulation of development of symbiont involved in interaction with host term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link NW_004955450 14,545,586 14,574,161 RGD:9068941
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itgav integrin subunit alpha V JBrowse link NW_004955403 11,588,536 11,669,809 RGD:9068941
G Krt6a keratin 6A JBrowse link NW_004955547 2,902,962 2,907,670 RGD:9068941
negative regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim15 tripartite motif containing 15 JBrowse link NW_004955583 277,564 283,422 RGD:9068941
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmga2 high mobility group AT-hook 2 JBrowse link NW_004955458 12,493,790 12,624,805 RGD:9068941
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link NW_004955481 1,651,422 1,674,402 RGD:9068941
G Morc2 MORC family CW-type zinc finger 2 JBrowse link NW_004955455 5,124,737 5,164,495 RGD:9068941
G Mphosph8 M-phase phosphoprotein 8 JBrowse link NW_004955497 518,462 546,748 RGD:9068941
G Resf1 retroelement silencing factor 1 JBrowse link NW_004955505 3,684,848 3,709,624 RGD:9068941
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link NW_004955588 290,497 338,438 RGD:9068941
G Tasor transcription activation suppressor JBrowse link NW_004955430 6,440,655 6,480,956 RGD:9068941
G Trim28 tripartite motif containing 28 JBrowse link NW_004955584 1,148,903 1,156,001 RGD:9068941
G Znf684 zinc finger protein 684 JBrowse link NW_004955537 416,010 430,356 RGD:9068941
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bpifa1 BPI fold containing family A member 1 JBrowse link NW_004955422 28,063,077 28,069,939 RGD:9068941
G Ltf lactotransferrin JBrowse link NW_004955420 25,580,449 25,604,277 RGD:9068941
negative regulation of transformation of host cell by virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbln1 fibulin 1 JBrowse link NW_004955413 29,837,134 29,911,313 RGD:9068941
negative regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004955468 11,388,154 11,389,259 RGD:9068941
G Fcn1 ficolin 1 JBrowse link NW_004955513 3,690,550 3,697,785 RGD:9068941
G Fcn3 ficolin 3 JBrowse link NW_004955452 6,630,548 6,635,334 RGD:9068941
G Gsn gelsolin JBrowse link NW_004955419 6,682,202 6,733,361 RGD:9068941
G Mid2 midline 2 JBrowse link NW_004955490 7,977,771 8,168,912 RGD:9068941
G Nbn nibrin JBrowse link NW_004955417 6,840,916 6,880,479 RGD:9068941
G Ptx3 pentraxin 3 JBrowse link NW_004955448 8,366,795 8,373,010 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004955408 3,953,801 4,035,494 RGD:9068941
G Snx3 sorting nexin 3 JBrowse link NW_004955411 33,339,974 33,344,563 RGD:9068941
G Trim10 tripartite motif containing 10 JBrowse link NW_004955583 268,856 277,079 RGD:9068941
G Trim11 tripartite motif containing 11 JBrowse link NW_004955581 114,750 123,410 RGD:9068941
G Trim25 tripartite motif containing 25 JBrowse link NW_004955451 5,918,287 5,934,252 RGD:9068941
G Trim26 tripartite motif containing 26 JBrowse link NW_004955583 303,081 325,560 RGD:9068941
G Trim56 tripartite motif containing 56 JBrowse link NW_004955456 16,181,890 16,185,598 RGD:9068941
G Trim59 tripartite motif containing 59 JBrowse link NW_004955448 10,962,181 10,971,948 RGD:9068941
G Trim8 tripartite motif containing 8 JBrowse link NW_004955485 7,784,625 7,798,131 RGD:9068941
negative regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Banf1 BAF nuclear assembly factor 1 JBrowse link NW_004955422 19,337,038 19,338,824 RGD:9068941
G Ccl5 C-C motif chemokine ligand 5 JBrowse link NW_004955481 10,293,758 10,301,118 RGD:9068941
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link NW_004955441 4,908,318 4,944,343 RGD:9068941
G Fam111a family with sequence similarity 111 member A JBrowse link NW_004955511 3,722,483 3,736,001 RGD:9068941
G Ifi16 interferon gamma inducible protein 16 JBrowse link NW_004955468 10,828,726 10,845,853 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
G Ifit5 interferon induced protein with tetratricopeptide repeats 5 JBrowse link NW_004955425 3,569,448 3,575,043 RGD:9068941
G Ifnb1 interferon beta 1 JBrowse link NW_004955434 23,301,623 23,302,304 RGD:9068941
G Ilf3 interleukin enhancer binding factor 3 JBrowse link NW_004955495 1,814,012 1,844,605 RGD:9068941
G Isg15 ISG15 ubiquitin like modifier JBrowse link NW_004955486 9,706,878 9,707,876 RGD:9068941
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link NW_004955416 16,305,534 16,321,596 RGD:9068941
G Ltf lactotransferrin JBrowse link NW_004955420 25,580,449 25,604,277 RGD:9068941
G Mavs mitochondrial antiviral signaling protein JBrowse link NW_004955415 14,691,918 14,704,782 RGD:9068941
G Oas3 2'-5'-oligoadenylate synthetase 3 JBrowse link NW_004955482 9,339,174 9,359,266 RGD:9068941
G Oasl 2'-5'-oligoadenylate synthetase like JBrowse link NW_004955455 10,658,080 10,682,493 RGD:9068941
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004955454 2,644,718 2,651,962 RGD:9068941
G Plscr1 phospholipid scramblase 1 JBrowse link NW_004955474 10,953,381 10,989,100 RGD:9068941
G Prox1 prospero homeobox 1 JBrowse link NW_004955406 3,715,140 3,770,019 RGD:9068941
G Rnasel ribonuclease L JBrowse link NW_004955406 21,413,950 21,424,860 RGD:9068941
G Rsad2 radical S-adenosyl methionine domain containing 2 JBrowse link NW_004955487 1,988,226 2,001,731 RGD:9068941
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link NW_004955495 1,431,677 1,437,035 RGD:9068941
G Srpk1 SRSF protein kinase 1 JBrowse link NW_004955437 3,664,290 3,729,832 RGD:9068941
G Srpk2 SRSF protein kinase 2 JBrowse link NW_004955410 9,807,936 10,034,760 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004955437 117,267 119,899 RGD:9068941
G Trim6 tripartite motif containing 6 JBrowse link NW_004955414 21,495,593 21,513,703 RGD:9068941
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link NW_004955494 3,925,478 3,985,469 RGD:9068941
negative regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
negative regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004955468 11,388,154 11,389,259 RGD:9068941
G Crebbp CREB binding protein JBrowse link NW_004955442 13,559,496 13,691,913 RGD:9068941
G Ltf lactotransferrin JBrowse link NW_004955420 25,580,449 25,604,277 RGD:9068941
G Mbl2 mannose binding lectin 2 JBrowse link NW_004955425 7,704,371 7,708,951 RGD:9068941
negative regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mid2 midline 2 JBrowse link NW_004955490 7,977,771 8,168,912 RGD:9068941
G Pml PML nuclear body scaffold JBrowse link NW_004955450 3,654,854 3,692,057 RGD:9068941
G Trim11 tripartite motif containing 11 JBrowse link NW_004955581 114,750 123,410 RGD:9068941
G Trim13 tripartite motif containing 13 JBrowse link NW_004955431 3,324,331 3,395,724 RGD:9068941
G Trim15 tripartite motif containing 15 JBrowse link NW_004955583 277,564 283,422 RGD:9068941
G Trim21 tripartite motif containing 21 JBrowse link NW_004955414 20,066,109 20,077,331 RGD:9068941
G Trim25 tripartite motif containing 25 JBrowse link NW_004955451 5,918,287 5,934,252 RGD:9068941
G Trim26 tripartite motif containing 26 JBrowse link NW_004955583 303,081 325,560 RGD:9068941
G Trim27 tripartite motif containing 27 JBrowse link NW_004955465 13,891,001 13,902,767 RGD:9068941
G Trim28 tripartite motif containing 28 JBrowse link NW_004955584 1,148,903 1,156,001 RGD:9068941
G Trim32 tripartite motif containing 32 JBrowse link NW_004955419 11,151,751 11,168,046 RGD:9068941
G Trim35 tripartite motif containing 35 JBrowse link NW_004955403 49,821,150 49,841,634 RGD:9068941
G Trim56 tripartite motif containing 56 JBrowse link NW_004955456 16,181,890 16,185,598 RGD:9068941
G Trim8 tripartite motif containing 8 JBrowse link NW_004955485 7,784,625 7,798,131 RGD:9068941
negative regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mid2 midline 2 JBrowse link NW_004955490 7,977,771 8,168,912 RGD:9068941
G Sp100 SP100 nuclear antigen JBrowse link NW_004955453 4,774,739 4,856,238 RGD:9068941
G Trim11 tripartite motif containing 11 JBrowse link NW_004955581 114,750 123,410 RGD:9068941
G Trim13 tripartite motif containing 13 JBrowse link NW_004955431 3,324,331 3,395,724 RGD:9068941
G Trim14 tripartite motif containing 14 JBrowse link NW_004955419 27,390,098 27,420,727 RGD:9068941
G Trim21 tripartite motif containing 21 JBrowse link NW_004955414 20,066,109 20,077,331 RGD:9068941
G Trim27 tripartite motif containing 27 JBrowse link NW_004955465 13,891,001 13,902,767 RGD:9068941
G Trim32 tripartite motif containing 32 JBrowse link NW_004955419 11,151,751 11,168,046 RGD:9068941
G Trim62 tripartite motif containing 62 JBrowse link NW_004955452 11,348,001 11,377,413 RGD:9068941
G Trim8 tripartite motif containing 8 JBrowse link NW_004955485 7,784,625 7,798,131 RGD:9068941
G Ubp1 upstream binding protein 1 JBrowse link NW_004955421 618,696 681,994 RGD:9068941
G Zfp36 ZFP36 ring finger protein JBrowse link NW_004955468 152,744 155,140 RGD:9068941
positive regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link NW_004955406 41,412,855 41,448,551 RGD:9068941
G Ppib peptidylprolyl isomerase B JBrowse link NW_004955450 11,241,279 11,246,628 RGD:9068941
G Stom stomatin JBrowse link NW_004955419 6,642,807 6,673,407 RGD:9068941
G Tbc1d20 TBC1 domain family member 20 JBrowse link NW_004955597 291,541 313,799 RGD:9068941
G Vapa VAMP associated protein A JBrowse link NW_004955402 2,274,248 2,309,461 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
G Ythdc2 YTH domain containing 2 JBrowse link NW_004955408 33,380,822 33,448,188 RGD:9068941
positive regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link NW_004955450 14,545,586 14,574,161 RGD:9068941
G Apoe apolipoprotein E JBrowse link NW_004955555 1,998,170 2,002,003 RGD:9068941
G Cav2 caveolin 2 JBrowse link NW_004955432 22,240,041 22,242,200 RGD:9068941
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link NW_004955555 426,894 446,235 RGD:9068941
G Cfl1 cofilin 1 JBrowse link NW_004955422 19,479,181 19,482,571 RGD:9068941
G Csf1r colony stimulating factor 1 receptor JBrowse link NW_004955415 4,434,486 4,462,505 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004955458 14,643,333 14,648,020 RGD:9068941
G Igf2r insulin like growth factor 2 receptor JBrowse link NW_004955439 20,754,915 20,874,759 RGD:9068941
G Pc pyruvate carboxylase JBrowse link NW_004955422 18,421,100 18,536,591 RGD:9068941
G Ppib peptidylprolyl isomerase B JBrowse link NW_004955450 11,241,279 11,246,628 RGD:9068941
positive regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cav2 caveolin 2 JBrowse link NW_004955432 22,240,041 22,242,200 RGD:9068941
G Pc pyruvate carboxylase JBrowse link NW_004955422 18,421,100 18,536,591 RGD:9068941
G Vapa VAMP associated protein A JBrowse link NW_004955402 2,274,248 2,309,461 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
positive regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd1 chromodomain helicase DNA binding protein 1 JBrowse link NW_004955418 14,200,618 14,268,361 RGD:9068941
G Ctdp1 CTD phosphatase subunit 1 JBrowse link NW_004955402 62,817,822 62,914,250 RGD:9068941
G Ep300 E1A binding protein p300 JBrowse link NW_004955413 26,647,553 26,727,875 RGD:9068941
G Fkbp8 FKBP prolyl isomerase 8 JBrowse link NW_004955524 3,037,825 3,044,296 RGD:9068941
G Gtf2b general transcription factor IIB JBrowse link NW_004955423 5,420,795 5,447,148 RGD:9068941
G Hpn hepsin JBrowse link NW_004955468 4,384,630 4,399,881 RGD:9068941
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955464 1,107,598 1,110,326 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004955496 1,728,840 1,827,749 RGD:9068941
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link NW_004955406 41,412,855 41,448,551 RGD:9068941
G Rrp1b ribosomal RNA processing 1B JBrowse link NW_004955407 38,553,866 38,577,547 RGD:9068941
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link NW_004955495 2,021,671 2,105,155 RGD:9068941
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link NW_004955455 8,420,263 8,457,105 RGD:9068941
G Snw1 SNW domain containing 1 JBrowse link NW_004955438 1,561,562 1,601,492 RGD:9068941
G Sp1 Sp1 transcription factor JBrowse link NW_004955458 644,435 677,360 RGD:9068941
G Taf11 TATA-box binding protein associated factor 11 JBrowse link NW_004955437 2,908,939 2,916,154 RGD:9068941
G Tfap4 transcription factor AP-4 JBrowse link NW_004955442 13,160,467 13,174,288 RGD:9068941
G Znf639 zinc finger protein 639 JBrowse link NW_004955420 8,513,192 8,522,689 RGD:9068941
positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link NW_004955413 4,162,467 4,166,783 RGD:9068941
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddb1 damage specific DNA binding protein 1 JBrowse link NW_004955511 6,209,777 6,233,594 RGD:9068941
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link NW_004955450 9,923,560 9,947,519 RGD:9068941
G Stau1 staufen double-stranded RNA binding protein 1 JBrowse link NW_004955445 8,971,585 9,003,647 RGD:9068941
G Tbc1d20 TBC1 domain family member 20 JBrowse link NW_004955597 291,541 313,799 RGD:9068941
positive regulation of apoptotic process by virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bad BCL2 associated agonist of cell death JBrowse link NW_004955422 20,795,585 20,809,039 RGD:9068941
G Bcl2l11 BCL2 like 11 JBrowse link NW_004955470 2,740,682 2,780,225 RGD:9068941
positive regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 FMRP translational regulator 1 JBrowse link NW_004955498 566,741 594,837 RGD:9068941
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link NW_004955436 12,235,767 12,247,817 RGD:9068941
G Pomc proopiomelanocortin JBrowse link NW_004955469 7,217,233 7,220,401 RGD:9068941
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2rl1 F2R like trypsin receptor 1 JBrowse link NW_004955425 24,050,901 24,054,039 RGD:9068941
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Top2a DNA topoisomerase II alpha JBrowse link NW_004955451 14,928,273 14,964,855 RGD:9068941
G Top2b DNA topoisomerase II beta JBrowse link NW_004955430 17,457,603 17,523,115 RGD:9068941
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
G Vps37b VPS37B subunit of ESCRT-I JBrowse link NW_004955482 5,879,273 5,884,217 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
positive regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsg basigin (Ok blood group) JBrowse link NW_004955495 7,148,806 7,156,296 RGD:9068941
G Cd4 CD4 molecule JBrowse link NW_004955413 4,400,326 4,422,110 RGD:9068941
G Cd74 CD74 molecule JBrowse link NW_004955415 4,129,151 4,138,336 RGD:9068941
G Lgals1 galectin 1 JBrowse link NW_004955413 24,072,086 24,075,452 RGD:9068941
G Lgals9 galectin 9 JBrowse link NW_004955481 5,234,125 5,249,564 RGD:9068941
G Nectin1 nectin cell adhesion molecule 1 JBrowse link NW_004955412 20,683,007 20,745,069 RGD:9068941
G P4hb prolyl 4-hydroxylase subunit beta JBrowse link NW_004955506 1,307,932 1,322,011 RGD:9068941
G Tmprss2 transmembrane serine protease 2 JBrowse link NW_004955407 40,958,562 40,985,415 RGD:9068941
G Trim11 tripartite motif containing 11 JBrowse link NW_004955581 114,750 123,410 RGD:9068941
G Trim21 tripartite motif containing 21 JBrowse link NW_004955414 20,066,109 20,077,331 RGD:9068941
positive regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Adarb1 adenosine deaminase RNA specific B1 JBrowse link NW_004955407 41,886,286 41,962,846 RGD:9068941
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
G Ddb1 damage specific DNA binding protein 1 JBrowse link NW_004955511 6,209,777 6,233,594 RGD:9068941
G Ddx3x DEAD-box helicase 3 X-linked JBrowse link NW_004955565 1,387,043 1,403,624 RGD:9068941
G Fkbp6 FKBP prolyl isomerase 6 JBrowse link NW_004955456 14,291,445 14,318,310 RGD:9068941
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link NW_004955450 9,923,560 9,947,519 RGD:9068941
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link NW_004955425 3,581,705 3,588,528 RGD:9068941
G Larp1 La ribonucleoprotein 1, translational regulator JBrowse link NW_004955408 9,002,443 9,080,938 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Nr5a2 nuclear receptor subfamily 5 group A member 2 JBrowse link NW_004955406 36,263,257 36,415,494 RGD:9068941
G Pabpc1 poly(A) binding protein cytoplasmic 1 JBrowse link NW_004955417 15,872,906 15,885,246 RGD:9068941
G Pde12 phosphodiesterase 12 JBrowse link NW_004955430 7,272,911 7,277,726 RGD:9068941
G Pkn2 protein kinase N2 JBrowse link NW_004955423 5,467,017 5,575,435 RGD:9068941
G Ppia peptidylprolyl isomerase A JBrowse link NW_004955456 7,381,923 7,383,203 RGD:9068941
G Ppid peptidylprolyl isomerase D JBrowse link NW_004955471 12,309,224 12,323,198 RGD:9068941
G Ppie peptidylprolyl isomerase E JBrowse link NW_004955452 17,242,255 17,256,776 RGD:9068941
G Ppih peptidylprolyl isomerase H JBrowse link NW_004955537 2,211,566 2,229,444 RGD:9068941
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link NW_004955415 31,991,478 31,997,277 RGD:9068941
G Srpk1 SRSF protein kinase 1 JBrowse link NW_004955437 3,664,290 3,729,832 RGD:9068941
G Srpk2 SRSF protein kinase 2 JBrowse link NW_004955410 9,807,936 10,034,760 RGD:9068941
G Stau1 staufen double-stranded RNA binding protein 1 JBrowse link NW_004955445 8,971,585 9,003,647 RGD:9068941
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link NW_004955458 793,753 798,755 RGD:9068941
G Tmem39a transmembrane protein 39A JBrowse link NW_004955427 19,118,631 19,184,315 RGD:9068941
G Vapb VAMP associated protein B and C JBrowse link NW_004955445 1,098,454 1,122,879 RGD:9068941
positive regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link NW_004955450 14,545,586 14,574,161 RGD:9068941
G Kpna2 karyopherin subunit alpha 2 JBrowse link NW_004955478 7,121,432 7,134,327 RGD:9068941
G Kpna6 karyopherin subunit alpha 6 JBrowse link NW_004955452 10,493,025 10,542,898 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
positive regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
G Stom stomatin JBrowse link NW_004955419 6,642,807 6,673,407 RGD:9068941
G Tmem250 transmembrane protein 250 JBrowse link NW_004955513 4,520,445 4,524,203 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
positive regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp2a charged multivesicular body protein 2A JBrowse link NW_004955584 1,156,828 1,160,056 RGD:9068941
G Chmp2b charged multivesicular body protein 2B JBrowse link NW_004955407 6,014,478 6,047,916 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Chmp4c charged multivesicular body protein 4C JBrowse link NW_004955417 96,674 135,601 RGD:9068941
G Ddb1 damage specific DNA binding protein 1 JBrowse link NW_004955511 6,209,777 6,233,594 RGD:9068941
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
G Vps37b VPS37B subunit of ESCRT-I JBrowse link NW_004955482 5,879,273 5,884,217 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
positive regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link NW_004955406 21,697,813 21,743,551 RGD:9068941
G Gtf2b general transcription factor IIB JBrowse link NW_004955423 5,420,795 5,447,148 RGD:9068941
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link NW_004955446 11,022,091 11,090,136 RGD:9068941
G Mdfic MyoD family inhibitor domain containing JBrowse link NW_004955432 20,790,404 20,869,521 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Pfn1 profilin 1 JBrowse link NW_004955467 10,357,838 10,360,651 RGD:9068941
G Rsf1 remodeling and spacing factor 1 JBrowse link NW_004955414 14,084,812 14,212,162 RGD:9068941
positive regulation of viral translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link NW_004955406 21,697,813 21,743,551 RGD:9068941
regulation of adhesion of symbiont to host epithelial cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sftpd surfactant protein D JBrowse link NW_004955510 213,468 226,096 RGD:9068941
regulation of entry of bacterium into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cav1 caveolin 1 JBrowse link NW_004955432 22,258,262 22,292,403 RGD:9068941
G Cxcl8 C-X-C motif chemokine ligand 8 JBrowse link NW_004955474 247,326 250,355 RGD:9068941
G Exoc2 exocyst complex component 2 JBrowse link NW_004955465 12,327,423 12,457,171 RGD:9068941
G Exoc7 exocyst complex component 7 JBrowse link NW_004955506 6,150,297 6,166,920 RGD:9068941
G Fuca2 alpha-L-fucosidase 2 JBrowse link NW_004955436 16,896,629 16,912,406 RGD:9068941
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxcl8 C-X-C motif chemokine ligand 8 JBrowse link NW_004955474 247,326 250,355 RGD:9068941
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snf8 SNF8 subunit of ESCRT-II JBrowse link NW_004955451 12,396,625 12,406,014 RGD:9068941
regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 JBrowse link NW_004955526 2,418,217 2,652,025 RGD:9068941
G Nectin2 nectin cell adhesion molecule 2 JBrowse link NW_004955555 1,959,702 1,985,679 RGD:9068941
G Trim25 tripartite motif containing 25 JBrowse link NW_004955451 5,918,287 5,934,252 RGD:9068941
G Trim62 tripartite motif containing 62 JBrowse link NW_004955452 11,348,001 11,377,413 RGD:9068941
regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Ddx5 DEAD-box helicase 5 JBrowse link NW_004955478 7,367,049 7,375,043 RGD:9068941
G Dicer1 dicer 1, ribonuclease III JBrowse link NW_004955438 17,374,899 17,431,599 RGD:9068941
G Ppia peptidylprolyl isomerase A JBrowse link NW_004955456 7,381,923 7,383,203 RGD:9068941
regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamp3 lysosomal associated membrane protein 3 JBrowse link NW_004955420 24,155,793 24,185,366 RGD:9068941
regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp2a charged multivesicular body protein 2A JBrowse link NW_004955584 1,156,828 1,160,056 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Chmp4c charged multivesicular body protein 4C JBrowse link NW_004955417 96,674 135,601 RGD:9068941
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link NW_004955440 3,456,165 3,460,024 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim25 tripartite motif containing 25 JBrowse link NW_004955451 5,918,287 5,934,252 RGD:9068941
G Trim62 tripartite motif containing 62 JBrowse link NW_004955452 11,348,001 11,377,413 RGD:9068941
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link NW_004955458 793,753 798,755 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11825
    regulation of biological process 8226
      regulation of symbiotic process 184
        modulation by symbiont of entry into host + 35
        modulation of development of symbiont involved in interaction with host + 1
        positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction + 3
        positive regulation of transepithelial migration of symbiont in host 0
        regulation by host of cytolysis of symbiont cells + 0
        regulation of adhesion of symbiont to host epithelial cell + 1
        regulation of cytolysis by symbiont of host cells + 1
        regulation of formation by symbiont of haustorium for nutrient acquisition from host + 0
        regulation of neutrophil mediated killing of symbiont cell + 3
        regulation of single-species biofilm formation in or on host organism + 2
        regulation of viral process + 170
Path 2
Term Annotations click to browse term
  biological_process 11825
    interspecies interaction between organisms 1222
      symbiotic process 302
        regulation of symbiotic process 184
          modulation by symbiont of entry into host + 35
          modulation of development of symbiont involved in interaction with host + 1
          positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction + 3
          positive regulation of transepithelial migration of symbiont in host 0
          regulation by host of cytolysis of symbiont cells + 0
          regulation of adhesion of symbiont to host epithelial cell + 1
          regulation of cytolysis by symbiont of host cells + 1
          regulation of formation by symbiont of haustorium for nutrient acquisition from host + 0
          regulation of neutrophil mediated killing of symbiont cell + 3
          regulation of single-species biofilm formation in or on host organism + 2
          regulation of viral process + 170
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.