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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of symbiotic process
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Accession:GO:0043903 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.
Comment:regulation of interspecies interactions between organisms
Synonyms:broad_synonym: regulation of interspecies interactions between organisms
 related_synonym: regulation of symbiosis, encompassing mutualism through parasitism


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intracellular transport of viral protein in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DYNLT1 dynein light chain Tctex-type 1 JBrowse link 1 48,058,804 48,066,389 RGD:9068941
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 JBrowse link 4 125,675 133,304 RGD:13508589
modulation by host of viral RNA genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FBXL2 F-box and leucine rich repeat protein 2 JBrowse link 23 3,498,253 3,606,016 RGD:9068941
G FMR1 FMRP translational regulator 1 JBrowse link X 116,249,079 116,287,008 RGD:13508589
G PHB prohibitin JBrowse link 9 25,525,711 25,536,722 RGD:9068941
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 38 2,157,109 2,188,543 RGD:13508589
modulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PSMC3 proteasome 26S subunit, ATPase 3 JBrowse link 18 42,212,083 42,218,958 RGD:9068941
negative regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCL8 C-C motif chemokine ligand 8 JBrowse link 9 38,949,184 38,950,702 RGD:13508589
G CCNK cyclin K JBrowse link 8 67,910,772 67,927,216 RGD:13508589
G CEACAM1 CEA cell adhesion molecule 1 JBrowse link 1 111,902,429 111,919,191 RGD:9068941
G DDX3X DEAD-box helicase 3 X-linked JBrowse link X 35,759,367 35,789,759 RGD:9068941
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 30 7,144,727 7,248,014 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 1 49,886,887 51,201,930 RGD:9068941
G VAPA VAMP associated protein A JBrowse link 7 75,844,927 75,891,811 RGD:13508589
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 15 4,972,369 4,984,218 RGD:13508589
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PTX3 pentraxin 3 JBrowse link 23 50,952,835 50,958,607 RGD:13508589
negative regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEACAM1 CEA cell adhesion molecule 1 JBrowse link 1 111,902,429 111,919,191 RGD:9068941
G CRP C-reactive protein JBrowse link 38 22,396,787 22,398,180 RGD:13508589
G LTF lactotransferrin JBrowse link 20 42,231,994 42,263,202 RGD:13508589
G PTX3 pentraxin 3 JBrowse link 23 50,952,835 50,958,607 RGD:13508589
negative regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
negative regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCL3 chemokine (C-C motif) ligand 3 JBrowse link 9 37,693,711 37,695,137 RGD:13508589
G CCL4 chemokine (C-C motif) ligand 4 JBrowse link 9 37,681,342 37,682,691 RGD:9068941
G CCL5 C-C motif chemokine ligand 5 JBrowse link 9 37,817,409 37,823,852 RGD:13508589
G HDAC1 histone deacetylase 1 JBrowse link 2 68,901,339 68,936,473 RGD:13508589
G HMGA2 high mobility group AT-hook 2 JBrowse link 10 8,348,101 8,491,435 RGD:9068941
G HMOX1 heme oxygenase 1 JBrowse link 10 28,744,404 28,751,544 RGD:9068941
G INPP5K inositol polyphosphate-5-phosphatase K JBrowse link 9 45,660,445 45,680,407 RGD:13508589
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 50,966,698 50,968,939 RGD:9068941
G POU2F3 POU class 2 homeobox 3 JBrowse link 5 13,693,686 13,761,295 RGD:9068941
G REST RE1 silencing transcription factor JBrowse link 13 49,041,082 49,062,596 RGD:13508589
G TARDBP TAR DNA binding protein JBrowse link 2 84,987,752 84,998,136 RGD:13508589
G TFAP4 transcription factor AP-4 JBrowse link 6 37,075,462 37,111,039 RGD:13508589
G ZNF639 zinc finger protein 639 JBrowse link 34 12,767,067 12,775,995 RGD:9068941
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STAT1 signal transducer and activator of transcription 1 JBrowse link 37 1,513,438 1,549,837 RGD:9068941
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
negative regulation of cytolysis by symbiont of host cells term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KRT6A keratin 6A JBrowse link 27 2,609,414 2,623,810 RGD:9068941
negative regulation of development of symbiont involved in interaction with host term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA2 annexin A2 JBrowse link 30 25,176,845 25,210,244 RGD:9068941
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ITGAV integrin subunit alpha V JBrowse link 36 28,815,215 28,890,569 RGD:9068941
G KRT6A keratin 6A JBrowse link 27 2,609,414 2,623,810 RGD:9068941
negative regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BST2 bone marrow stromal cell antigen 2 JBrowse link 20 45,383,757 45,387,420 RGD:9068941
G MX1 MX dynamin like GTPase 1 JBrowse link 31 35,898,206 35,929,802 RGD:9068941
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AICDA activation induced cytidine deaminase JBrowse link 27 37,064,107 37,073,791 RGD:13508589
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 RGD:13508589
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 JBrowse link 10 25,910,973 25,917,508 RGD:13508589
G HMGA2 high mobility group AT-hook 2 JBrowse link 10 8,348,101 8,491,435 RGD:9068941
G INPP5K inositol polyphosphate-5-phosphatase K JBrowse link 9 45,660,445 45,680,407 RGD:13508589
G MORC2 MORC family CW-type zinc finger 2 JBrowse link 26 23,951,704 23,993,620 RGD:13508589
G MPHOSPH8 M-phase phosphoprotein 8 JBrowse link 25 18,392,706 18,443,241 RGD:13508589
G RESF1 retroelement silencing factor 1 JBrowse link 27 16,829,611 16,856,960 RGD:9068941
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 17 60,035,819 60,069,721 RGD:9068941
G TASOR transcription activation suppressor JBrowse link 20 33,665,231 33,713,264 RGD:13508589
G TRIM28 tripartite motif containing 28 JBrowse link 1 99,408,920 99,415,432 RGD:9068941
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BPIFA1 BPI fold containing family A member 1 JBrowse link 24 22,475,407 22,482,666 RGD:13508589
G LTF lactotransferrin JBrowse link 20 42,231,994 42,263,202 RGD:13508589
negative regulation of transformation of host cell by virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FBLN1 fibulin 1 JBrowse link 10 20,498,097 20,564,776 RGD:9068941
negative regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FCN2 ficolin 2 JBrowse link 9 50,868,942 50,876,001 RGD:13508589
G GSN gelsolin JBrowse link 11 74,248,227 74,268,129 RGD:13508589
G LOC475935 interferon-induced transmembrane protein 1-like JBrowse link 18 25,484,731 25,485,927 RGD:13508589
G LOC483397 interferon-induced transmembrane protein 1 JBrowse link 18 25,494,018 25,495,114 RGD:13508589
G LOC488347 tripartite motif-containing protein 26 JBrowse link 35 26,386,575 26,395,549 RGD:9068941
G MID2 midline 2 JBrowse link X 81,267,037 81,467,613 RGD:9068941
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 21 6,448,909 6,528,185 RGD:9068941
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:9068941
G PTX3 pentraxin 3 JBrowse link 23 50,952,835 50,958,607 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:9068941
G SNX3 sorting nexin 3 JBrowse link 12 65,252,175 65,294,620 RGD:9068941
G TRIM10 tripartite motif containing 10 JBrowse link 35 26,349,624 26,357,002 RGD:13508589
G TRIM11 tripartite motif containing 11 JBrowse link 14 640,375 647,427 RGD:13508589
G TRIM25 tripartite motif containing 25 JBrowse link 9 31,703,628 31,725,674 RGD:13508589
G TRIM56 tripartite motif containing 56 JBrowse link 6 8,744,970 8,752,896 RGD:9068941
G TRIM59 tripartite motif containing 59 JBrowse link 34 26,495,628 26,509,445 RGD:13508589
G TRIM8 tripartite motif containing 8 JBrowse link 28 15,124,310 15,138,660 RGD:9068941
negative regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAR adenosine deaminase RNA specific JBrowse link 7 42,762,021 42,785,192 RGD:9068941
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 RGD:9068941
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 JBrowse link 10 25,910,973 25,917,508 RGD:9068941
G BANF1 BAF nuclear assembly factor 1 JBrowse link 18 51,269,817 51,271,484 RGD:9068941
G BST2 bone marrow stromal cell antigen 2 JBrowse link 20 45,383,757 45,387,420 RGD:9068941
G CCL5 C-C motif chemokine ligand 5 JBrowse link 9 37,817,409 37,823,852 RGD:13508589
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link 17 29,494,641 29,537,933 RGD:13508589
G FAM111A family with sequence similarity 111 member A JBrowse link 18 37,584,326 37,595,316 RGD:9068941
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 JBrowse link 28 4,318,616 4,329,811 RGD:13508589
G IFNB1 interferon beta 1 JBrowse link 11 40,668,295 40,668,855 RGD:13508589
G ILF3 interleukin enhancer binding factor 3 JBrowse link 20 50,511,915 50,544,234 RGD:13508589
G ISG15 ISG15 ubiquitin like modifier JBrowse link 5 56,230,879 56,237,354 RGD:13508589
G ISG20 interferon stimulated exonuclease gene 20 JBrowse link 3 51,822,642 51,833,665 RGD:13508589
G LOC475935 interferon-induced transmembrane protein 1-like JBrowse link 18 25,484,731 25,485,927 RGD:13508589
G LOC483397 interferon-induced transmembrane protein 1 JBrowse link 18 25,494,018 25,495,114 RGD:13508589
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 JBrowse link 4 125,675 133,304 RGD:13508589
G LOC611500 phospholipid scramblase 1 JBrowse link 23 41,639,938 41,668,972 RGD:9068941
G LTF lactotransferrin JBrowse link 20 42,231,994 42,263,202 RGD:13508589
G MAVS mitochondrial antiviral signaling protein JBrowse link 24 17,510,209 17,529,286 RGD:13508589
G MX1 MX dynamin like GTPase 1 JBrowse link 31 35,898,206 35,929,802 RGD:9068941
G OAS1 2'-5'-oligoadenylate synthetase 1 JBrowse link 26 10,385,393 10,396,734 RGD:13508589
G OAS2 2'-5'-oligoadenylate synthetase 2 JBrowse link 26 10,431,881 10,450,085 RGD:13508589
G OAS3 2'-5'-oligoadenylate synthetase 3 JBrowse link 26 10,404,548 10,423,039 RGD:13508589
G OASL oligoadenylate synthetase-like 2 JBrowse link 26 16,855,386 16,869,102 RGD:13508589
G OASL 2'-5'-oligoadenylate synthetase like JBrowse link 26 16,837,376 16,850,388 RGD:13508589
G PROX1 prospero homeobox 1 JBrowse link 7 11,996,282 12,047,693 RGD:13508589
G RNASEL ribonuclease L JBrowse link 7 15,978,055 16,001,604 RGD:13508589
G RSAD2 radical S-adenosyl methionine domain containing 2 JBrowse link 17 4,488,202 4,508,705 RGD:13508589
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 20 50,961,557 50,966,261 RGD:13508589
G SLPI secretory leukocyte peptidase inhibitor JBrowse link 24 32,566,030 32,568,406 RGD:13508589
G SRPK1 SRSF protein kinase 1 JBrowse link 12 4,941,292 5,029,580 RGD:9068941
G SRPK2 SRSF protein kinase 2 JBrowse link 18 14,991,187 15,243,124 RGD:9068941
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:13508589
G TRIM6 tripartite motif containing 6 JBrowse link 21 28,595,887 28,611,562 RGD:9068941
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 JBrowse link 16 9,598,339 9,660,540 RGD:13508589
negative regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HMOX1 heme oxygenase 1 JBrowse link 10 28,744,404 28,751,544 RGD:9068941
G IL32 interleukin 32 JBrowse link 6 38,119,287 38,122,979 RGD:9068941
negative regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 JBrowse link 10 25,910,973 25,917,508 RGD:9068941
G CREBBP CREB binding protein JBrowse link 6 37,410,201 37,536,688 RGD:9068941
G LTF lactotransferrin JBrowse link 20 42,231,994 42,263,202 RGD:9068941
G MBL2 mannose binding lectin 2 JBrowse link 4 29,419,886 29,424,377 RGD:9068941
negative regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHMP3 charged multivesicular body protein 3 JBrowse link 17 38,600,793 38,658,368 RGD:9068941
G LOC488347 tripartite motif-containing protein 26 JBrowse link 35 26,386,575 26,395,549 RGD:9068941
G MID2 midline 2 JBrowse link X 81,267,037 81,467,613 RGD:9068941
G PML PML nuclear body scaffold JBrowse link 30 37,232,337 37,278,434 RGD:9068941
G TRIM11 tripartite motif containing 11 JBrowse link 14 640,375 647,427 RGD:13508589
G TRIM13 tripartite motif containing 13 JBrowse link 22 1,877,672 1,893,097 RGD:13508589
G TRIM21 tripartite motif containing 21 JBrowse link 21 26,775,227 26,783,180 RGD:13508589
G TRIM25 tripartite motif containing 25 JBrowse link 9 31,703,628 31,725,674 RGD:13508589
G TRIM27 tripartite motif containing 27 JBrowse link 35 25,904,381 25,922,531 RGD:13508589
G TRIM28 tripartite motif containing 28 JBrowse link 1 99,408,920 99,415,432 RGD:9068941
G TRIM32 tripartite motif containing 32 JBrowse link 11 70,453,130 70,465,030 RGD:13508589
G TRIM35 tripartite motif containing 35 JBrowse link 25 30,276,673 30,307,059 RGD:13508589
G TRIM56 tripartite motif containing 56 JBrowse link 6 8,744,970 8,752,896 RGD:9068941
G TRIM8 tripartite motif containing 8 JBrowse link 28 15,124,310 15,138,660 RGD:9068941
negative regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC475935 interferon-induced transmembrane protein 1-like JBrowse link 18 25,484,731 25,485,927 RGD:9068941
G MID2 midline 2 JBrowse link X 81,267,037 81,467,613 RGD:9068941
G SP100 SP100 nuclear antigen JBrowse link 25 42,538,428 42,635,825 RGD:9068941
G TRIM11 tripartite motif containing 11 JBrowse link 14 640,375 647,427 RGD:13508589
G TRIM13 tripartite motif containing 13 JBrowse link 22 1,877,672 1,893,097 RGD:13508589
G TRIM14 tripartite motif containing 14 JBrowse link 11 55,313,700 55,343,217 RGD:13508589
G TRIM21 tripartite motif containing 21 JBrowse link 21 26,775,227 26,783,180 RGD:13508589
G TRIM27 tripartite motif containing 27 JBrowse link 35 25,904,381 25,922,531 RGD:13508589
G TRIM32 tripartite motif containing 32 JBrowse link 11 70,453,130 70,465,030 RGD:13508589
G TRIM62 tripartite motif containing 62 JBrowse link 2 68,247,138 68,265,530 RGD:13508589
G TRIM8 tripartite motif containing 8 JBrowse link 28 15,124,310 15,138,660 RGD:9068941
G UBP1 upstream binding protein 1 JBrowse link 23 3,445,730 3,498,242 RGD:9068941
G ZFP36 ZFP36 ring finger protein JBrowse link 1 113,815,972 113,818,093 RGD:9068941
positive regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HSPA8 heat shock protein family A (Hsp70) member 8 JBrowse link 5 11,292,219 11,296,851 RGD:9068941
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 38 2,157,109 2,188,543 RGD:13508589
G PPIB peptidylprolyl isomerase B JBrowse link 30 28,654,193 28,660,129 RGD:9068941
G STOM stomatin JBrowse link 11 74,270,409 74,284,277 RGD:9068941
G TBC1D20 TBC1 domain family member 20 JBrowse link 24 20,400,647 20,419,652 RGD:13508589
G VAPA VAMP associated protein A JBrowse link 7 75,844,927 75,891,811 RGD:13508589
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
G YTHDC2 YTH domain containing 2 JBrowse link 11 3,537,571 3,613,455 RGD:13508589
positive regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA2 annexin A2 JBrowse link 30 25,176,845 25,210,244 RGD:9068941
G APOE apolipoprotein E JBrowse link 1 110,525,717 110,528,534 RGD:9068941
G CAV2 caveolin 2 JBrowse link 14 55,437,622 55,445,481 RGD:9068941
G CEACAM1 CEA cell adhesion molecule 1 JBrowse link 1 111,902,429 111,919,191 RGD:9068941
G CFL1 cofilin 1 JBrowse link 18 51,404,649 51,408,240 RGD:9068941
G CSF1R colony stimulating factor 1 receptor JBrowse link 4 58,980,699 59,010,683 RGD:9068941
G IFNG interferon gamma JBrowse link 10 10,406,866 10,411,698 RGD:9068941
G IGF2R insulin like growth factor 2 receptor JBrowse link 1 49,161,551 49,262,260 RGD:13508589
G LOC100688922 uncharacterized LOC100688922 JBrowse link 20 43,542,093 43,553,933 RGD:9068941
G PC pyruvate carboxylase JBrowse link 18 50,406,994 50,507,677 RGD:9068941
G PPIB peptidylprolyl isomerase B JBrowse link 30 28,654,193 28,660,129 RGD:9068941
positive regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAV2 caveolin 2 JBrowse link 14 55,437,622 55,445,481 RGD:13508589
G LOC100688922 uncharacterized LOC100688922 JBrowse link 20 43,542,093 43,553,933 RGD:9068941
G PC pyruvate carboxylase JBrowse link 18 50,406,994 50,507,677 RGD:9068941
G VAPA VAMP associated protein A JBrowse link 7 75,844,927 75,891,811 RGD:13508589
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:9068941
G ZNF502 zinc finger protein 502 JBrowse link 20 43,541,257 43,556,656 RGD:13508589
positive regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHD1 chromodomain helicase DNA binding protein 1 JBrowse link 3 11,288,873 11,359,972 RGD:13508589
G CTDP1 CTD phosphatase subunit 1 JBrowse link 1 886,973 945,994 RGD:9068941
G EP300 E1A binding protein p300 JBrowse link 10 24,076,538 24,156,708 RGD:13508589
G FKBP8 FKBP prolyl isomerase 8 JBrowse link 20 44,494,856 44,504,084 RGD:9068941
G GTF2B general transcription factor IIB JBrowse link 6 59,491,986 59,527,142 RGD:13508589
G HPN hepsin JBrowse link 1 117,486,308 117,503,127 RGD:13508589
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 50,966,698 50,968,939 RGD:9068941
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 32 28,516,002 28,633,759 RGD:9068941
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 38 2,157,109 2,188,543 RGD:13508589
G RRP1B ribosomal RNA processing 1B JBrowse link 31 37,652,584 37,670,396 RGD:13508589
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 20 50,175,489 50,268,865 RGD:9068941
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 26 28,692,610 28,728,778 RGD:9068941
G SNW1 SNW domain containing 1 JBrowse link 8 50,478,924 50,512,360 RGD:9068941
G SP1 Sp1 transcription factor JBrowse link 27 1,802,587 1,861,187 RGD:13508589
G TAF11 TATA-box binding protein associated factor 11 JBrowse link 12 4,088,203 4,095,300 RGD:9068941
G TFAP4 transcription factor AP-4 JBrowse link 6 37,075,462 37,111,039 RGD:13508589
G ZNF639 zinc finger protein 639 JBrowse link 34 12,767,067 12,775,995 RGD:9068941
positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GAPDH glyceraldehyde-3-phosphate dehydrogenase JBrowse link 27 38,468,889 38,472,653 RGD:9068941
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDB1 damage specific DNA binding protein 1 JBrowse link 18 55,064,720 55,097,623 RGD:13508589
G HACD3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 30 29,880,567 29,920,932 RGD:13508589
G STAU1 staufen double-stranded RNA binding protein 1 JBrowse link 24 35,816,224 35,868,791 RGD:13508589
G TBC1D20 TBC1 domain family member 20 JBrowse link 24 20,400,647 20,419,652 RGD:13508589
positive regulation of apoptotic process by virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BAD BCL2 associated agonist of cell death JBrowse link 18 52,781,335 52,791,789 RGD:13508589
G BCL2L11 BCL2 like 11 JBrowse link 17 35,619,804 35,665,782 RGD:9068941
G CCR5 C-C motif chemokine receptor 5 JBrowse link 20 42,293,288 42,297,952 RGD:9068941
positive regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FMR1 FMRP translational regulator 1 JBrowse link X 116,249,079 116,287,008 RGD:13508589
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARG1 arginase 1 JBrowse link 12 242,717 255,736 RGD:13508589
G POMC proopiomelanocortin JBrowse link 17 19,431,396 19,438,247 RGD:9068941
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2RL1 F2R like trypsin receptor 1 JBrowse link 3 29,801,119 29,810,006 RGD:13508589
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TOP2A DNA topoisomerase II alpha JBrowse link 9 22,207,501 22,237,497 RGD:13508589
G TOP2B DNA topoisomerase II beta JBrowse link 23 18,159,521 18,206,413 RGD:9068941
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TSG101 tumor susceptibility 101 JBrowse link 21 40,910,870 40,952,922 RGD:13508589
G VPS37B VPS37B subunit of ESCRT-I JBrowse link 26 6,594,981 6,621,902 RGD:13508589
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 5 80,327,059 80,340,380 RGD:9068941
positive regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BSG basigin JBrowse link 20 57,942,703 57,951,089 RGD:9068941
G CD4 CD4 molecule JBrowse link 27 38,204,003 38,250,771 RGD:13508589
G CD74 CD74 molecule JBrowse link 4 58,689,745 58,698,421 RGD:9068941
G HLA-DRB1 MHC class II DLA DRB1 beta chain JBrowse link 12 2,151,409 2,164,564 RGD:9068941
G LGALS1 galectin 1 JBrowse link 10 26,932,351 26,935,580 RGD:9068941
G LGALS9 galectin 9 JBrowse link 9 42,154,613 42,170,423 RGD:9068941
G NECTIN1 nectin cell adhesion molecule 1 JBrowse link 5 14,228,197 14,292,825 RGD:9068941
G P4HB prolyl 4-hydroxylase subunit beta JBrowse link 9 427,827 436,880 RGD:9068941
G TMPRSS2 transmembrane serine protease 2 JBrowse link 31 35,933,082 35,968,732 RGD:9068941
G TRIM11 tripartite motif containing 11 JBrowse link 14 640,375 647,427 RGD:13508589
G TRIM21 tripartite motif containing 21 JBrowse link 21 26,775,227 26,783,180 RGD:13508589
G TRIM38 tripartite motif containing 38 JBrowse link 35 23,894,521 23,939,392 RGD:13508589
positive regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAR adenosine deaminase RNA specific JBrowse link 7 42,762,021 42,785,192 RGD:13508589
G ADARB1 adenosine deaminase RNA specific B1 JBrowse link 31 38,715,529 38,799,353 RGD:13508589
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 16 40,554,214 40,571,841 RGD:13508589
G DDB1 damage specific DNA binding protein 1 JBrowse link 18 55,064,720 55,097,623 RGD:13508589
G DDX3X DEAD-box helicase 3 X-linked JBrowse link X 35,759,367 35,789,759 RGD:9068941
G FKBP6 FKBP prolyl isomerase 6 JBrowse link 6 6,836,043 6,868,268 RGD:13508589
G HACD3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 30 29,880,567 29,920,932 RGD:13508589
G LARP1 La ribonucleoprotein 1, translational regulator JBrowse link 4 54,991,528 55,045,976 RGD:13508589
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene JBrowse link 7 80,937,433 80,938,175 RGD:9068941
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 JBrowse link 4 125,675 133,304 RGD:13508589
G NOTCH1 notch receptor 1 JBrowse link 9 48,975,972 49,018,985 RGD:13508589
G NR5A2 nuclear receptor subfamily 5 group A member 2 JBrowse link 7 2,925,915 3,062,118 RGD:13508589
G PABPC1 poly(A) binding protein cytoplasmic 1 JBrowse link 13 2,563,698 2,580,610 RGD:9068941
G PDE12 phosphodiesterase 12 JBrowse link 20 32,884,819 32,890,995 RGD:13508589
G PKN2 protein kinase N2 JBrowse link 6 59,556,668 59,638,626 RGD:9068941
G PPID peptidylprolyl isomerase D JBrowse link 15 55,781,284 55,794,951 RGD:13508589
G PPIE peptidylprolyl isomerase E JBrowse link 15 3,156,067 3,173,028 RGD:13508589
G PPIH peptidylprolyl isomerase H JBrowse link 15 671,323 689,627 RGD:13508589
G RAD23A RAD23 homolog A, nucleotide excision repair protein JBrowse link 20 49,244,330 49,250,058 RGD:9068941
G SRPK1 SRSF protein kinase 1 JBrowse link 12 4,941,292 5,029,580 RGD:9068941
G SRPK2 SRSF protein kinase 2 JBrowse link 18 14,991,187 15,243,124 RGD:9068941
G STAU1 staufen double-stranded RNA binding protein 1 JBrowse link 24 35,816,224 35,868,791 RGD:13508589
G TARBP2 TARBP2 subunit of RISC loading complex JBrowse link 27 1,715,157 1,720,050 RGD:13508589
G TMEM39A transmembrane protein 39A JBrowse link 33 23,083,979 23,121,269 RGD:9068941
G TRIM38 tripartite motif containing 38 JBrowse link 35 23,894,521 23,939,392 RGD:9068941
G VAPB VAMP associated protein B and C JBrowse link 24 43,182,158 43,238,019 RGD:13508589
positive regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA2 annexin A2 JBrowse link 30 25,176,845 25,210,244 RGD:9068941
G KPNA2 karyopherin subunit alpha 2 JBrowse link 9 12,546,912 12,556,163 RGD:9068941
G KPNA6 karyopherin subunit alpha 6 JBrowse link 2 69,025,409 69,078,635 RGD:13508589
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 5 80,327,059 80,340,380 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 1 13,638,965 13,673,295 RGD:9068941
positive regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAB7A RAB7A, member RAS oncogene family JBrowse link 20 2,704,716 2,776,518 RGD:9068941
G STOM stomatin JBrowse link 11 74,270,409 74,284,277 RGD:9068941
G TMEM250 transmembrane protein 250 JBrowse link 9 49,308,397 49,311,360 RGD:13508589
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 5 80,327,059 80,340,380 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 1 13,638,965 13,673,295 RGD:9068941
positive regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHMP2A charged multivesicular body protein 2A JBrowse link 1 99,405,322 99,408,257 RGD:13508589
G CHMP2B charged multivesicular body protein 2B JBrowse link 31 789,586 817,925 RGD:13508589
G CHMP3 charged multivesicular body protein 3 JBrowse link 17 38,600,793 38,658,368 RGD:9068941
G CHMP4B charged multivesicular body protein 4B JBrowse link 24 22,995,677 23,050,084 RGD:13508589
G CHMP4C charged multivesicular body protein 4C JBrowse link 29 28,839,459 28,865,793 RGD:13508589
G DDB1 damage specific DNA binding protein 1 JBrowse link 18 55,064,720 55,097,623 RGD:13508589
G TSG101 tumor susceptibility 101 JBrowse link 21 40,910,870 40,952,922 RGD:13508589
G VPS37B VPS37B subunit of ESCRT-I JBrowse link 26 6,594,981 6,621,902 RGD:13508589
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 5 80,327,059 80,340,380 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 1 13,638,965 13,673,295 RGD:13508589
positive regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DHX9 DExH-box helicase 9 JBrowse link 7 16,233,763 16,292,576 RGD:13508589
G GTF2B general transcription factor IIB JBrowse link 6 59,491,986 59,527,142 RGD:9068941
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 2 43,918,210 43,996,817 RGD:9068941
G MDFIC MyoD family inhibitor domain containing JBrowse link 14 54,063,832 54,153,346 RGD:13508589
G NOTCH1 notch receptor 1 JBrowse link 9 48,975,972 49,018,985 RGD:9068941
G PFN1 profilin 1 JBrowse link 5 31,670,483 31,671,891 RGD:9068941
G RSF1 remodeling and spacing factor 1 JBrowse link 21 20,968,356 21,124,308 RGD:13508589
positive regulation of viral translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DHX9 DExH-box helicase 9 JBrowse link 7 16,233,763 16,292,576 RGD:13508589
regulation of adhesion of symbiont to host epithelial cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SFTPD surfactant protein D JBrowse link 4 29,394,755 29,407,499 RGD:13508589
regulation of entry of bacterium into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAV1 caveolin 1 JBrowse link 14 55,458,934 55,494,563 RGD:13508589
G CXCL8 C-X-C motif chemokine ligand 8 JBrowse link 13 62,435,035 62,438,354 RGD:13508589
G EXOC2 exocyst complex component 2 JBrowse link 35 859,158 1,084,228 RGD:13508589
G EXOC7 exocyst complex component 7 JBrowse link 9 4,538,017 4,554,341 RGD:9068941
G FUCA2 alpha-L-fucosidase 2 JBrowse link 1 35,028,152 35,091,376 RGD:9068941
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CXCL8 C-X-C motif chemokine ligand 8 JBrowse link 13 62,435,035 62,438,354 RGD:13508589
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SNF8 SNF8 subunit of ESCRT-II JBrowse link 9 25,151,992 25,162,105 RGD:9068941
regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 JBrowse link 12 70,137,232 70,387,797 RGD:13508589
G NECTIN2 nectin cell adhesion molecule 2 JBrowse link 1 110,543,140 110,569,168 RGD:13508589
G TRIM21 tripartite motif containing 21 JBrowse link 21 26,775,227 26,783,180 RGD:13508589
G TRIM22 tripartite motif containing 22 JBrowse link 21 28,677,196 28,696,413 RGD:13508589
G TRIM25 tripartite motif containing 25 JBrowse link 9 31,703,628 31,725,674 RGD:9068941
G TRIM27 tripartite motif containing 27 JBrowse link 35 25,904,381 25,922,531 RGD:13508589
G TRIM34 tripartite motif containing 34 JBrowse link 21 28,635,177 28,656,759 RGD:13508589
G TRIM38 tripartite motif containing 38 JBrowse link 35 23,894,521 23,939,392 RGD:13508589
G TRIM62 tripartite motif containing 62 JBrowse link 2 68,247,138 68,265,530 RGD:13508589
G TRIM68 tripartite motif containing 68 JBrowse link 21 26,982,173 26,992,162 RGD:13508589
G TRIML1 tripartite motif family like 1 JBrowse link 16 42,954,353 42,984,128 RGD:13508589
G TRIML2 tripartite motif family like 2 JBrowse link 16 42,984,204 43,000,037 RGD:13508589
regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCL2 BCL2 apoptosis regulator JBrowse link 1 13,733,849 13,900,653 RGD:13508589
G DDX5 DEAD-box helicase 5 JBrowse link 9 12,300,706 12,307,931 RGD:9068941
G DICER1 dicer 1, ribonuclease III JBrowse link 8 63,970,245 64,029,438 RGD:9068941
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene JBrowse link 7 80,937,433 80,938,175 RGD:9068941
G MIR24-1 microRNA mir-24-1 JBrowse link 1 71,677,608 71,677,669 RGD:9068941
G MIR24-2 microRNA mir-24-2 JBrowse link 20 48,620,684 48,620,745 RGD:9068941
G MIR378 microRNA mir-378 JBrowse link 4 59,276,347 59,276,406 RGD:9068941
G MIR93 microRNA mir-93 JBrowse link 6 9,498,780 9,498,840 RGD:9068941
regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 JBrowse link 10 25,910,973 25,917,508 RGD:9068941
G LAMP3 lysosomal associated membrane protein 3 JBrowse link 34 16,092,172 16,126,563 RGD:9068941
regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHMP2A charged multivesicular body protein 2A JBrowse link 1 99,405,322 99,408,257 RGD:9068941
G CHMP3 charged multivesicular body protein 3 JBrowse link 17 38,600,793 38,658,368 RGD:9068941
G CHMP4B charged multivesicular body protein 4B JBrowse link 24 22,995,677 23,050,084 RGD:9068941
G CHMP4C charged multivesicular body protein 4C JBrowse link 29 28,839,459 28,865,793 RGD:9068941
G CXCR4 C-X-C motif chemokine receptor 4 JBrowse link 19 38,874,650 38,877,740 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 1 13,638,965 13,673,295 RGD:9068941
regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TRIM25 tripartite motif containing 25 JBrowse link 9 31,703,628 31,725,674 RGD:9068941
G TRIM62 tripartite motif containing 62 JBrowse link 2 68,247,138 68,265,530 RGD:13508589
G TSG101 tumor susceptibility 101 JBrowse link 21 40,910,870 40,952,922 RGD:9068941
regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TARBP2 TARBP2 subunit of RISC loading complex JBrowse link 27 1,715,157 1,720,050 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16041
    regulation of biological process 10829
      regulation of symbiotic process 211
        modulation by symbiont of entry into host + 44
        modulation of development of symbiont involved in interaction with host + 1
        positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction + 4
        positive regulation of transepithelial migration of symbiont in host 0
        regulation by host of cytolysis of symbiont cells + 0
        regulation of adhesion of symbiont to host epithelial cell + 1
        regulation of cytolysis by symbiont of host cells + 1
        regulation of formation by symbiont of haustorium for nutrient acquisition from host + 0
        regulation of neutrophil mediated killing of symbiont cell + 3
        regulation of single-species biofilm formation in or on host organism + 2
        regulation of viral process + 196
Path 2
Term Annotations click to browse term
  biological_process 16041
    interspecies interaction between organisms 1562
      symbiotic process 355
        regulation of symbiotic process 211
          modulation by symbiont of entry into host + 44
          modulation of development of symbiont involved in interaction with host + 1
          positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction + 4
          positive regulation of transepithelial migration of symbiont in host 0
          regulation by host of cytolysis of symbiont cells + 0
          regulation of adhesion of symbiont to host epithelial cell + 1
          regulation of cytolysis by symbiont of host cells + 1
          regulation of formation by symbiont of haustorium for nutrient acquisition from host + 0
          regulation of neutrophil mediated killing of symbiont cell + 3
          regulation of single-species biofilm formation in or on host organism + 2
          regulation of viral process + 196
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.