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ONTOLOGY REPORT - ANNOTATIONS


Term:protein-containing complex subunit organization
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Accession:GO:0043933 term browser browse the term
Definition:Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein complex.
Synonyms:exact_synonym: protein complex subunit organisation;   protein complex subunit organization
 related_synonym: cellular macromolecular complex organization;   cellular macromolecular complex subunit organisation;   cellular macromolecular complex subunit organization;   macromolecular complex organization;   macromolecular complex subunit organisation;   macromolecular complex subunit organization
 alt_id: GO:0034600;   GO:0034621;   GO:0071822


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protein-containing complex subunit organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Washc5 WASH complex subunit 5 ISO (MGI:MGI:6249286|PMID:26572744) MGI PMID:26572744 MGI:MGI:6249286 NCBI chrNW_004936470:22,667,354...22,725,538 JBrowse link
'de novo' actin filament nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jmy junction mediating and regulatory protein, p53 cofactor ISO (MGI:MGI:4418600|PMID:19287377) UniProtKB PMID:19287377 MGI:MGI:4418600 NCBI chrNW_004936549:7,074,644...7,163,531 JBrowse link
90S preribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl38 ribosomal protein L38 ISO (MGI:MGI:5014009|PMID:21529712) MGI PMID:21529712 MGI:MGI:5014009 NCBI chrNW_004936655:242,259...246,416 JBrowse link
actin filament capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin ISO (MGI:MGI:5619440|PMID:23325791)
(PMID:19666531)
UniProtKB PMID:19666531, PMID:23325791 MGI:MGI:5619440 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Myh9 myosin heavy chain 9 NOT ISO (MGI:MGI:5619440|PMID:23325791) UniProtKB PMID:23325791 MGI:MGI:5619440 NCBI chrNW_004936492:4,384,215...4,466,229 JBrowse link
G Scin scinderin ISO (PMID:19666531) UniProtKB PMID:19666531 NCBI chrNW_004936795:418,874...495,990 JBrowse link
G Tpm1 tropomyosin 1 ISO RGD PMID:15779917 RGD:1600523 NCBI chrNW_004936471:23,643,645...23,670,775 JBrowse link
G Vil1 villin 1 ISO (PMID:16921170), (PMID:17182858), (PMID:19808673) UniProtKB PMID:16921170, PMID:17182858, PMID:19808673 NCBI chrNW_004936569:914,511...938,481 JBrowse link
actin filament depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 ISO RGD PMID:18678705 RGD:2313131 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Cfl1 cofilin 1 ISO (MGI:MGI:5784994|PMID:11809832)
(PMID:11812157)
UniProtKB PMID:11809832, PMID:11812157 MGI:MGI:5784994 NCBI chrNW_004936599:3,678,724...3,682,314 JBrowse link
G Cfl2 cofilin 2 ISO (MGI:MGI:5574550|PMID:24840128), (MGI:MGI:5784994|PMID:11809832)
(PMID:19752190)
MGI
UniProtKB
PMID:11809832, PMID:19752190, PMID:24840128 MGI:MGI:5574550, MGI:MGI:5784994 NCBI chrNW_004936494:8,946,442...8,948,320 JBrowse link
G Dstn destrin, actin depolymerizing factor ISO (MGI:MGI:5784994|PMID:11809832)
(PMID:11812157)
UniProtKB PMID:11809832, PMID:11812157 MGI:MGI:5784994 NCBI chrNW_004936485:2,504,492...2,537,507 JBrowse link
G Gsn gelsolin ISO (PMID:30568254)
(MGI:MGI:6450443|PMID:30568254)
BHF-UCL PMID:30568254 MGI:MGI:6450443 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 ISO (PMID:21864500), (PMID:28230050)
(MGI:MGI:5513026|PMID:23911929)
UniProt
UniProtKB
PMID:21864500, PMID:23911929, PMID:28230050 MGI:MGI:5513026 NCBI chrNW_004936564:5,568,613...5,579,402 JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 ISO (MGI:MGI:5513026|PMID:23911929)
(PMID:24440334)
UniProt
UniProtKB
PMID:23911929, PMID:24440334 MGI:MGI:5513026 NCBI chrNW_004936528:6,217,130...6,349,891 JBrowse link
G Mical3 microtubule associated monooxygenase, calponin and LIM domain containing 3 ISO (PMID:24440334) UniProtKB PMID:24440334 NCBI chrNW_004936807:769,417...985,752 JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:10620493 RGD:10002737 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Vil1 villin 1 ISO (PMID:11500485) UniProtKB PMID:11500485 NCBI chrNW_004936569:914,511...938,481 JBrowse link
actin filament fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 ISO (MGI:MGI:5784994|PMID:11809832) UniProtKB PMID:11809832 MGI:MGI:5784994 NCBI chrNW_004936599:3,678,724...3,682,314 JBrowse link
G Cfl2 cofilin 2 ISO (MGI:MGI:5784994|PMID:11809832) UniProtKB PMID:11809832 MGI:MGI:5784994 NCBI chrNW_004936494:8,946,442...8,948,320 JBrowse link
G Dstn destrin, actin depolymerizing factor ISO (MGI:MGI:5784994|PMID:11809832) UniProtKB PMID:11809832 MGI:MGI:5784994 NCBI chrNW_004936485:2,504,492...2,537,507 JBrowse link
G Wdr1 WD repeat domain 1 ISO (MGI:MGI:5787764|PMID:25915128) UniProtKB PMID:25915128 MGI:MGI:5787764 NCBI chrNW_004936477:16,643,142...16,682,450 JBrowse link
actin filament polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:17615370 RGD:8693596 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Aif1 allograft inflammatory factor 1 ISO (PMID:16049345) UniProtKB PMID:16049345 NCBI chrNW_004936727:1,907,493...1,909,350 JBrowse link
G Catip ciliogenesis associated TTC17 interacting protein ISO (PMID:24475127) UniProtKB PMID:24475127 NCBI chrNW_004936569:869,695...876,239 JBrowse link
G Cobl cordon-bleu WH2 repeat protein ISO (MGI:MGI:3765263|PMID:17956734) BHF-UCL PMID:17956734 MGI:MGI:3765263 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Diaph1 diaphanous related formin 1 ISO (MGI:MGI:3034135|PMID:14992721), (MGI:MGI:6201827|PMID:23558171) UniProt PMID:14992721, PMID:23558171 MGI:MGI:3034135, MGI:MGI:6201827 NCBI chrNW_004936504:12,548,452...12,645,236 JBrowse link
G Diaph2 diaphanous related formin 2 ISO (MGI:MGI:3034135|PMID:14992721) MGI PMID:14992721 MGI:MGI:3034135 NCBI chrNW_004936584:2,286,919...3,081,652 JBrowse link
G Diaph3 diaphanous related formin 3 ISO (MGI:MGI:6201827|PMID:23558171) UniProt PMID:23558171 MGI:MGI:6201827 NCBI chrNW_004936705:1,381,025...1,833,890 JBrowse link
G Fam107a family with sequence similarity 107 member A ISO (MGI:MGI:6162291|PMID:21969592) UniProtKB PMID:21969592 MGI:MGI:6162291 NCBI chrNW_004936473:2,438,995...2,483,746 JBrowse link
G Gas7 growth arrest specific 7 ISO (MGI:MGI:2159085|PMID:11795944) MGI PMID:11795944 MGI:MGI:2159085 NCBI chrNW_004936595:2,890,336...3,011,314 JBrowse link
G Gsn gelsolin ISO (MGI:MGI:5619440|PMID:23325791)
(PMID:23729654)
(PMID:3020431)
UniProtKB PMID:3020431, PMID:23325791, PMID:23729654 MGI:MGI:5619440 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Lmod2 leiomodin 2 ISO (MGI:MGI:5700101|PMID:26487682) UniProtKB PMID:26487682 MGI:MGI:5700101 NCBI chrNW_004936605:1,829,187...1,838,385 JBrowse link
G Micall2 MICAL like 2 ISO (MGI:MGI:5508574|PMID:20008558) UniProtKB
UniProt
PMID:20008558 MGI:MGI:5508574, RGD:8553724 NCBI chrNW_004936754:1,567,815...1,586,843 JBrowse link
G Msrb1 methionine sulfoxide reductase B1 ISO (MGI:MGI:5513026|PMID:23911929) UniProtKB PMID:23911929 MGI:MGI:5513026 NCBI chrNW_004936694:2,086,573...2,090,752 JBrowse link
G Msrb2 methionine sulfoxide reductase B2 ISO (MGI:MGI:5513026|PMID:23911929) UniProtKB PMID:23911929 MGI:MGI:5513026 NCBI chrNW_004936520:5,035,442...5,052,736 JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO (MGI:MGI:2651741|PMID:12482861) MGI PMID:12482861 MGI:MGI:2651741 NCBI chrNW_004936470:22,963,498...23,117,923 JBrowse link
G Myh9 myosin heavy chain 9 NOT ISO (MGI:MGI:5619440|PMID:23325791) UniProtKB PMID:23325791 MGI:MGI:5619440 NCBI chrNW_004936492:4,384,215...4,466,229 JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:5468414|PMID:22750946) MGI PMID:22750946 MGI:MGI:5468414 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Spire1 spire type actin nucleation factor 1 ISO (MGI:MGI:5698602|PMID:26305500) CACAO PMID:26305500 MGI:MGI:5698602 NCBI chrNW_004936626:2,151,990...2,292,307 JBrowse link
G Ttc17 tetratricopeptide repeat domain 17 ISO (PMID:24475127) UniProtKB PMID:24475127 NCBI chrNW_004936562:5,115,507...5,223,587 JBrowse link
G Vil1 villin 1 ISO (PMID:11500485) UniProtKB PMID:11500485 NCBI chrNW_004936569:914,511...938,481 JBrowse link
G Was WASP actin nucleation promoting factor ISO (MGI:MGI:2387810|PMID:12147689)
(PMID:29925947)
MGI
UniProt
PMID:12147689, PMID:29925947 MGI:MGI:2387810 NCBI chrNW_004936721:634,685...641,248 JBrowse link
G Wasl WASP like actin nucleation promoting factor ISO (PMID:16767080) UniProt PMID:16767080 NCBI chrNW_004936605:1,741,832...1,816,694 JBrowse link
actin filament uncapping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 ISO (PMID:25433700) UniProtKB PMID:25433700 NCBI chrNW_004936484:16,186,844...16,248,394 JBrowse link
actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmod1 leiomodin 1 ISO (PMID:26370058) UniProtKB PMID:26370058 NCBI chrNW_004936567:2,557,090...2,598,069 JBrowse link
G Lmod2 leiomodin 2 ISO (PMID:20685966), (PMID:26370058)
(PMID:25250574)
UniProtKB PMID:20685966, PMID:25250574, PMID:26370058 NCBI chrNW_004936605:1,829,187...1,838,385 JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) UniProtKB PMID:25250574 NCBI chrNW_004936603:1,510,330...1,520,741 JBrowse link
activation of transmembrane receptor protein tyrosine kinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 ISO (PMID:19424712) UniProtKB PMID:19424712 NCBI chrNW_004936470:37,105,469...37,328,183 JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO (MGI:MGI:3590443|PMID:16162937) MGI PMID:16162937 MGI:MGI:3590443 NCBI chrNW_004936471:36,427,598...36,447,903 JBrowse link
G Nrg1 neuregulin 1 ISO (PMID:9553078) BHF-UCL PMID:9553078 NCBI chrNW_004936766:1,104,841...1,306,368 JBrowse link
G Pdgfc platelet derived growth factor C ISO (MGI:MGI:1858279|PMID:10806482) MGI PMID:10806482 MGI:MGI:1858279 NCBI chrNW_004936576:3,357,399...3,555,828 JBrowse link
G Prlr prolactin receptor ISO (PMID:10585417) UniProtKB PMID:10585417 NCBI chrNW_004936518:6,352,133...6,495,242 JBrowse link
Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 ISO (PMID:11741539), (PMID:17220302), (PMID:29925947) FlyBase PMID:11741539, PMID:17220302, PMID:29925947 NCBI chrNW_004936491:9,980,228...10,021,417 JBrowse link
G Actr3 actin related protein 3 ISO (PMID:11741539), (PMID:17220302) FlyBase PMID:11741539, PMID:17220302 NCBI chrNW_004936469:55,639,345...55,699,330 JBrowse link
G Arpc1b actin related protein 2/3 complex subunit 1B ISO (PMID:11741539) FlyBase PMID:11741539 NCBI chrNW_004936750:1,651,026...1,662,208 JBrowse link
G Arpc2 actin related protein 2/3 complex subunit 2 ISO (PMID:11741539) FlyBase PMID:11741539 NCBI chrNW_004936569:758,358...786,995 JBrowse link
G Arpc3 actin related protein 2/3 complex subunit 3 ISO (PMID:11741539) FlyBase PMID:11741539 NCBI chrNW_004936639:1,389,199...1,390,047 JBrowse link
G Arpc4 actin related protein 2/3 complex subunit 4 ISO (PMID:11741539) FlyBase PMID:11741539 NCBI chrNW_004936602:3,364,545...3,375,789 JBrowse link
G Arpc5 actin related protein 2/3 complex subunit 5 ISO (PMID:11741539) FlyBase PMID:11741539 NCBI chrNW_004936481:6,267,133...6,276,173 JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 ISO (PMID:12515716) UniProtKB PMID:12515716 NCBI chrNW_004936549:256,097...541,860 JBrowse link
G Jmy junction mediating and regulatory protein, p53 cofactor ISO (MGI:MGI:4418600|PMID:19287377) UniProtKB PMID:19287377 MGI:MGI:4418600 NCBI chrNW_004936549:7,074,644...7,163,531 JBrowse link
G Magel2 MAGE family member L2 ISO (PMID:23452853) UniProtKB PMID:23452853 NCBI chrNW_004936805:882,296...886,442 JBrowse link
G Trim27 tripartite motif containing 27 ISO (PMID:23452853) UniProtKB PMID:23452853 NCBI chrNW_004936914:245,348...263,060 JBrowse link
G Washc1 WASH complex subunit 1 ISO (MGI:MGI:4415646|PMID:19922875), (MGI:MGI:5603599|PMID:23452853)
(PMID:23452853)
UniProtKB PMID:19922875, PMID:23452853 MGI:MGI:4415646, MGI:MGI:5603599 NCBI chrNW_004936606:209,289...228,986 JBrowse link
astral microtubule nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpj centromere protein J ISO (PMID:11003675) MGI PMID:11003675 NCBI chrNW_004936720:2,149,296...2,201,599 JBrowse link
autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:3690270|PMID:16714284) MGI PMID:16714284 MGI:MGI:3690270 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog ISO (MGI:MGI:5488852|PMID:23479740) MGI PMID:23479740 MGI:MGI:5488852 NCBI chrNW_004936517:841,402...941,054 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (MGI:MGI:5805578|PMID:27628032) UniProtKB PMID:27628032 MGI:MGI:5805578 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Map1lc3c microtubule associated protein 1 light chain 3 gamma ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004936526:8,492,840...8,497,028 JBrowse link
G Mcoln1 mucolipin 1 ISO (MGI:MGI:4839416|PMID:20600908) MGI PMID:20600908 MGI:MGI:4839416 NCBI chrNW_004936588:4,600,344...4,608,793 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 ISO (MGI:MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004936642:2,745,889...2,833,286 JBrowse link
G Rubcnl rubicon like autophagy enhancer ISO (PMID:28306502), (PMID:30704899)
(MGI:MGI:6282647|PMID:30704899)
UniProt PMID:28306502, PMID:30704899 MGI:MGI:6282647 NCBI chrNW_004936857:839,418...870,961 JBrowse link
G Snap29 synaptosome associated protein 29 ISO (PMID:23217709) UniProtKB PMID:23217709 NCBI chrNW_004936619:2,377,284...2,402,049 JBrowse link
G Snapin SNAP associated protein ISO (MGI:MGI:5504339|PMID:22797916)
(MGI:MGI:4879078|PMID:20920792)
MGI PMID:20920792, PMID:22797916 MGI:MGI:4879078, MGI:MGI:5504339 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Snx14 sorting nexin 14 ISO (PMID:25848753) UniProtKB PMID:25848753 NCBI chrNW_004936510:5,685,342...5,786,672 JBrowse link
G Stx17 syntaxin 17 ISO (PMID:23217709), (PMID:24554770)
(PMID:28306502)
UniProtKB
UniProt
PMID:23217709, PMID:24554770, PMID:28306502 NCBI chrNW_004936524:8,324,562...8,381,244 JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO (PMID:22342342) UniProtKB PMID:22342342 NCBI chrNW_004936750:756,602...781,422 JBrowse link
G Ubqln1 ubiquilin 1 ISO (PMID:23459205) GO_Central PMID:23459205 NCBI chrNW_004936828:543,651...588,673 JBrowse link
G Uvrag UV radiation resistance associated ISO (PMID:28306502) UniProt PMID:28306502 NCBI chrNW_004936498:4,555,325...4,869,099 JBrowse link
G Vamp7 vesicle associated membrane protein 7 NOT ISO (PMID:23217709) UniProtKB PMID:23217709 NCBI chrNW_004936958:345,055...393,384 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:23217709) UniProtKB PMID:23217709 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
G Vcp valosin containing protein ISO (PMID:20104022) UniProtKB PMID:20104022 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog NOT ISO (PMID:25783203) UniProtKB PMID:25783203 NCBI chrNW_004936488:6,247,329...6,277,494 JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes ISO (PMID:25783203) UniProtKB PMID:25783203 NCBI chrNW_004936485:15,879,324...15,900,544 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes ISO (PMID:24554770), (PMID:25783203) UniProtKB PMID:24554770, PMID:25783203 NCBI chrNW_004936558:2,227,305...2,257,725 JBrowse link
G Vps33b VPS33B late endosome and lysosome associated NOT ISO (PMID:25783203) UniProtKB PMID:25783203 NCBI chrNW_004936483:16,007,448...16,031,353 JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B NOT ISO (PMID:23217709) UniProtKB PMID:23217709 NCBI chrNW_004936495:11,043,813...11,064,113 JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 NOT ISO (PMID:20505359) UniProtKB PMID:20505359 NCBI chrNW_004936765:909,118...946,788 JBrowse link
autophagosome membrane docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 ISO (PMID:25686604) GO_Central PMID:25686604 NCBI chrNW_004936495:155,709...195,860 JBrowse link
G Snap29 synaptosome associated protein 29 ISO (PMID:25686604) GO_Central PMID:25686604 NCBI chrNW_004936619:2,377,284...2,402,049 JBrowse link
G Stx17 syntaxin 17 ISO (PMID:25686604) GO_Central PMID:25686604 NCBI chrNW_004936524:8,324,562...8,381,244 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:25686604) GO_Central PMID:25686604 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004936541:1,259,422...1,263,885 JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:21131972) UniProtKB PMID:21131972 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (PMID:21131974) UniProtKB PMID:21131974 NCBI chrNW_004936594:4,075,105...4,124,850 JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 ISO (PMID:19944400), (PMID:19944405) UniProtKB PMID:19944400, PMID:19944405 NCBI chrNW_004936641:3,656,331...3,674,907 JBrowse link
G Dnaaf2 dynein axonemal assembly factor 2 ISO (PMID:19052621) UniProtKB PMID:19052621 NCBI chrNW_004936583:386,806...394,650 JBrowse link
G Dnaaf3 dynein axonemal assembly factor 3 ISO (PMID:22387996) UniProtKB PMID:22387996 NCBI chrNW_004936886:441,389...447,733 JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 ISO (PMID:28041644) UniProtKB PMID:28041644 NCBI chrNW_004936499:7,463,225...7,503,322 JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 ISO (MGI:MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:MGI:6436377 NCBI chrNW_004936591:4,642,762...4,750,006 JBrowse link
G Drc1 dynein regulatory complex subunit 1 ISO (PMID:23354437) UniProtKB PMID:23354437 NCBI chrNW_004936493:6,000,881...6,043,437 JBrowse link
axonemal microtubule depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif19 kinesin family member 19 ISO (MGI:MGI:5460922|PMID:23168168) UniProtKB PMID:23168168 MGI:MGI:5460922 NCBI chrNW_004936655:131,367...156,888 JBrowse link
barbed-end actin filament capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 ISO (PMID:8626479) BHF-UCL PMID:8626479 NCBI chrNW_004936477:20,695,109...20,766,053 JBrowse link
G Add2 adducin 2 ISO (PMID:8626479) BHF-UCL PMID:8626479 NCBI chrNW_004936491:14,856,764...14,971,161 JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 ISO (MGI:MGI:3758397|PMID:17656356) MGI PMID:17656356 MGI:MGI:3758397 NCBI chrNW_004936690:1,184,644...1,223,732 JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO (MGI:MGI:3758397|PMID:17656356) MGI PMID:17656356 MGI:MGI:3758397 NCBI chrNW_004936474:5,594,193...5,656,665 JBrowse link
G Dbnl drebrin like NOT ISO (MGI:MGI:1353214|PMID:10637315) MGI PMID:10637315 MGI:MGI:1353214 NCBI chrNW_004936478:19,007,630...19,021,068 JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 ISO (MGI:MGI:4460022|PMID:20532239), (MGI:MGI:5486559|PMID:15558031)
(MGI:MGI:5476881|PMID:23314863)
UniProtKB PMID:15558031, PMID:20532239, PMID:23314863 MGI:MGI:4460022, MGI:MGI:5476881, MGI:MGI:5486559 NCBI chrNW_004936587:1,785,721...1,951,474 JBrowse link
G Rdx radixin ISO RGD PMID:2500445 RGD:8693627 NCBI chrNW_004936612:3,992,542...4,060,598 JBrowse link
G Twf1 twinfilin actin binding protein 1 ISO (MGI:MGI:3840765|PMID:18837697) BHF-UCL PMID:18837697 MGI:MGI:3840765 NCBI chrNW_004936512:2,280,266...2,293,101 JBrowse link
G Vil1 villin 1 ISO (PMID:15272027) UniProtKB PMID:15272027 NCBI chrNW_004936569:914,511...938,481 JBrowse link
barbed-end actin filament uncapping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil1 capping protein regulator and myosin 1 linker 1 ISO (MGI:MGI:3588909|PMID:16054028) UniProtKB PMID:16054028 MGI:MGI:3588909 NCBI chrNW_004936671:1,404,595...1,632,916 JBrowse link
box C/D snoRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nufip1 nuclear FMR1 interacting protein 1 ISO (PMID:17636026) BHF-UCL PMID:17636026 NCBI chrNW_004936791:1,095,583...1,138,965 JBrowse link
G Pih1d1 PIH1 domain containing 1 ISO (PMID:17636026) BHF-UCL PMID:17636026 NCBI chrNW_004936664:3,321,278...3,326,720 JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 ISO (MGI:MGI:5882914|PMID:11842104) CAFA PMID:11842104 MGI:MGI:5882914 NCBI chrNW_004936492:289,834...295,883 JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:17636026) UniProtKB PMID:17636026 NCBI chrNW_004936480:252,435...256,609 JBrowse link
G Znhit6 zinc finger HIT-type containing 6 ISO (PMID:17636026) BHF-UCL PMID:17636026 NCBI chrNW_004936608:33,425...94,291 JBrowse link
cellular protein complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 ISO RGD PMID:12177200 RGD:2313249 NCBI chrNW_004936495:8,173,521...8,179,249 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 MGI PMID:18644871 RGD:10412301 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Nrg1 neuregulin 1 ISO (PMID:15155732) MGI PMID:15155732 NCBI chrNW_004936766:1,104,841...1,306,368 JBrowse link
cellular protein-containing complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks4b ankyrin repeat and sterile alpha motif domain containing 4B ISO (PMID:26812018) UniProtKB PMID:26812018 NCBI chrNW_004936501:6,423,719...6,436,639 JBrowse link
G Atf1 activating transcription factor 1 ISO RGD PMID:10770487 RGD:2316075 NCBI chrNW_004936512:8,379,802...8,426,574 JBrowse link
G Axin1 axin 1 ISO (PMID:16601693) BHF-UCL PMID:16601693 NCBI chrNW_004936501:599,963...633,837 JBrowse link
G CUNH9orf24 chromosome unknown C9orf24 homolog ISO (MGI:MGI:3794006|PMID:18163442) MGI PMID:18163442 MGI:MGI:3794006 NCBI chrNW_004936524:2,472,611...2,494,478 JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:23361462) GO_Central PMID:23361462 NCBI chrNW_004936481:6,896,487...6,934,938 JBrowse link
G Dmd dystrophin ISO (MGI:MGI:3837615|PMID:19198614), (MGI:MGI:4420848|PMID:20080623) BHF-UCL PMID:19198614, PMID:20080623 MGI:MGI:3837615, MGI:MGI:4420848 NCBI chrNW_004936553:7,157,526...7,943,703 JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ISO (PMID:27916661) UniProtKB PMID:27916661 NCBI chrNW_004936521:6,583,828...6,605,744 JBrowse link
G Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 ISO (PMID:27916661) UniProtKB PMID:27916661 NCBI chrNW_004936520:3,063,250...3,105,610 JBrowse link
G Fga fibrinogen alpha chain ISO (PMID:8910396) BHF-UCL PMID:8910396 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Fgb fibrinogen beta chain ISO (PMID:8910396) BHF-UCL PMID:8910396 NCBI chrNW_004936576:1,306,076...1,313,485 JBrowse link
G Fgg fibrinogen gamma chain ISO (PMID:8910396) BHF-UCL PMID:8910396 NCBI chrNW_004936576:1,343,657...1,352,085 JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 ISO (PMID:25263524) UniProtKB PMID:25263524 NCBI chrNW_004936520:9,716,178...9,725,949 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:11583998) UniProtKB PMID:11583998 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial ISO RGD PMID:12082077 RGD:633879 NCBI chrNW_004936588:3,265,344...3,287,035 JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO (MGI:MGI:1932601|PMID:11274056) MGI PMID:11274056 MGI:MGI:1932601 NCBI chrNW_004936497:9,512,350...9,619,250 JBrowse link
G Nlrp5 NLR family pyrin domain containing 5 ISO (MGI:MGI:3811945|PMID:18804437) MGI PMID:18804437 MGI:MGI:3811945 NCBI chrNW_004936562:1,069,745...1,092,383 JBrowse link
G Ooep oocyte expressed protein ISO (MGI:MGI:3811945|PMID:18804437) MGI PMID:18804437 MGI:MGI:3811945 NCBI chrNW_004937318:2,623...3,622 JBrowse link
G Pde4d phosphodiesterase 4D ISO RGD PMID:11134006 RGD:1299425 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
G Pde4dip phosphodiesterase 4D interacting protein ISO RGD PMID:11134006 RGD:1299425 NCBI chrNW_004936872:58,460...208,195 JBrowse link
G Ric3 RIC3 acetylcholine receptor chaperone ISO (MGI:MGI:4366573|PMID:19812337) MGI PMID:19812337 MGI:MGI:4366573 NCBI chrNW_004936528:9,790,594...9,829,120 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO (MGI:MGI:3806427|PMID:18722179) MGI PMID:18722179 MGI:MGI:3806427 NCBI chrNW_004936842:667,960...669,367 JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO (PMID:23109420) ParkinsonsUK-UCL PMID:23109420 NCBI chrNW_004936500:10,451,599...10,812,239 JBrowse link
G Traf2 TNF receptor associated factor 2 ISO (MGI:MGI:4462284|PMID:20614026) BHF-UCL PMID:20614026 MGI:MGI:4462284 NCBI chrNW_004936669:1,004,891...1,034,913 JBrowse link
G Ush1c USH1 protein network component harmonin ISO (PMID:26812018) UniProtKB PMID:26812018 NCBI chrNW_004936528:1,552,175...1,594,740 JBrowse link
CENP-A containing nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hjurp Holliday junction recognition protein ISO (PMID:19410544), (PMID:19410545) UniProtKB PMID:19410544, PMID:19410545 NCBI chrNW_004936525:3,528,379...3,544,088 JBrowse link
G Mis18a MIS18 kinetochore protein A ISO (MGI:MGI:5438906|PMID:22516971) MGI PMID:22516971 MGI:MGI:5438906 NCBI chrNW_004936500:9,822,366...9,832,732 JBrowse link
centromere complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpv centromere protein V ISO (PMID:18772885) UniProtKB PMID:18772885 NCBI chrNW_004936821:267,137...276,969 JBrowse link
centrosome-templated microtubule nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep192 centrosomal protein 192 ISO (PMID:17980596) UniProtKB PMID:17980596 NCBI chrNW_004936626:2,565,302...2,659,863 JBrowse link
G Nin ninein ISO (MGI:MGI:3575622|PMID:15784680) MGI PMID:15784680 MGI:MGI:3575622 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
chaperone-mediated autophagy translocation complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
chaperone-mediated protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs10 Bardet-Biedl syndrome 10 ISO (PMID:20080638) MGI PMID:20080638 NCBI chrNW_004936568:4,640,611...4,644,627 JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 ISO (PMID:20080638) MGI PMID:20080638 NCBI chrNW_004936662:1,822,727...1,832,403 JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:20080638) MGI PMID:20080638 NCBI chrNW_004936545:7,416,257...7,436,024 JBrowse link
G Clu clusterin ISO (PMID:17412999) Alzheimers_University_of_Toronto PMID:17412999 NCBI chrNW_004936675:499,745...513,515 JBrowse link
G Hopx HOP homeobox ISO (PMID:10811660) CAFA PMID:10811660 NCBI chrNW_004936482:18,841,220...18,872,136 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:15644312) BHF-UCL PMID:15644312 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:10811660) CAFA PMID:10811660 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO (PMID:10811660) CAFA PMID:10811660 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO (PMID:10811660) CAFA PMID:10811660 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO (PMID:15644312) BHF-UCL PMID:15644312 NCBI chrNW_004936647:2,087,650...2,133,343 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:MGI:4420847|PMID:20080638) MGI PMID:20080638 MGI:MGI:4420847 NCBI chrNW_004936485:9,089,118...9,114,396 JBrowse link
G Ndufaf1 NADH:ubiquinone oxidoreductase complex assembly factor 1 ISO (PMID:17344420) UniProt PMID:17344420 NCBI chrNW_004936471:4,733,707...4,750,390 JBrowse link
G Pfdn6 prefoldin subunit 6 ISO (PMID:9630229) UniProtKB PMID:9630229 NCBI chrNW_004936476:25,575,534...25,576,827 JBrowse link
G Psmg1 proteasome assembly chaperone 1 ISO (PMID:16251969)
(PMID:17189198)
UniProt PMID:16251969, PMID:17189198 NCBI chrNW_004936500:3,997,415...4,006,394 JBrowse link
G Psmg2 proteasome assembly chaperone 2 ISO (PMID:16251969)
(PMID:17189198)
UniProt PMID:16251969, PMID:17189198 NCBI chrNW_004936626:2,328,646...2,344,831 JBrowse link
G Psmg3 proteasome assembly chaperone 3 ISO (PMID:17189198), (PMID:30133132) UniProt PMID:17189198, PMID:30133132 NCBI chrNW_004936754:1,676,895...1,678,959 JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO (PMID:10811660) CAFA PMID:10811660 NCBI chrNW_004936646:969,674...990,532 JBrowse link
chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:MGI:5780634 NCBI chrNW_004936709:800,197...852,659 JBrowse link
G Plagl2 PLAG1 like zinc finger 2 ISO (MGI:MGI:3771409|PMID:17983586) MGI PMID:17983586 MGI:MGI:3771409 NCBI chrNW_004936485:19,098,000...19,106,164 JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G Lpl lipoprotein lipase ISO (PMID:11342582) UniProt PMID:11342582 NCBI chrNW_004936555:4,084,099...4,108,219 JBrowse link
clathrin coat assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 ISO PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chrNW_004936657:3,343,675...3,395,877 JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 ISO RGD PMID:8262066 RGD:2306271 NCBI chrNW_004936490:5,156...127,666 JBrowse link
G Caly calcyon neuron specific vesicular protein ISO (PMID:16595675) UniProtKB PMID:16595675 NCBI chrNW_004936486:19,463,989...19,471,976 JBrowse link
G Clint1 clathrin interactor 1 ISO RGD PMID:12213833 RGD:1303953 NCBI chrNW_004936515:5,391,139...5,419,919 JBrowse link
G Clta clathrin light chain A ISO (PMID:11756460) CAFA PMID:11756460 NCBI chrNW_004936524:4,170,425...4,191,951 JBrowse link
G Cltc clathrin heavy chain ISO (PMID:11756460) CAFA PMID:11756460 NCBI chrNW_004936490:3,659,682...3,726,222 JBrowse link
G Dab2 DAB adaptor protein 2 ISO (MGI:MGI:5442514|PMID:12234931) UniProtKB
RGD
PMID:12234931, PMID:19000037 MGI:MGI:5442514, RGD:7243162 NCBI chrNW_004936518:2,915,819...2,936,474 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (PMID:12807910) BHF-UCL PMID:12807910 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 ISO (PMID:20448150) UniProtKB PMID:20448150 NCBI chrNW_004936596:3,234,603...3,265,484 JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 ISO (PMID:20448150) UniProtKB PMID:20448150 NCBI chrNW_004936549:3,455,172...3,565,507 JBrowse link
G Hip1 huntingtin interacting protein 1 ISO (PMID:11577110), (PMID:11889126) RGD
MGI
PMID:11577110, PMID:11889126 RGD:708337 NCBI chrNW_004936543:2,496,301...2,569,019 JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO (MGI:MGI:5805370|PMID:11564758) ParkinsonsUK-UCL PMID:11564758 MGI:MGI:5805370 NCBI chrNW_004936558:1,778,862...1,804,071 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO (PMID:16262731) RGD
BHF-UCL
PMID:11190274, PMID:16262731 RGD:1600754 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Snap91 synaptosome associated protein 91 ISO (MGI:MGI:4418638|PMID:11102472), (MGI:MGI:4418641|PMID:10428863)
(MGI:MGI:4418645|PMID:9045662)
BHF-UCL PMID:9045662, PMID:10428863, PMID:11102472 MGI:MGI:4418638, MGI:MGI:4418641, MGI:MGI:4418645 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
clathrin coat disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 ISO (MGI:MGI:4439191|PMID:20160091) MGI PMID:20160091 MGI:MGI:4439191 NCBI chrNW_004936692:2,788,477...2,836,094 JBrowse link
G Gak cyclin G associated kinase ISO (PMID:16155256)
(MGI:MGI:4439191|PMID:20160091)
ParkinsonsUK-UCL
MGI
PMID:16155256, PMID:20160091 MGI:MGI:4439191 NCBI chrNW_004936477:22,254,109...22,300,827 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:MGI:4439191|PMID:20160091) RGD
MGI
PMID:8363588, PMID:20160091 MGI:MGI:4439191, RGD:10059376 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
COP9 signalosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tespa1 thymocyte expressed, positive selection associated 1 ISO (MGI:MGI:5432321|PMID:22561606) UniProtKB PMID:22561606 MGI:MGI:5432321 NCBI chrNW_004936891:512,882...549,676 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:4839445|PMID:17569865) BHF-UCL PMID:17569865 MGI:MGI:4839445 NCBI chrNW_004936864:150,742...179,205 JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 ISO (PMID:22358839) UniProtKB PMID:22358839 NCBI chrNW_004936569:6,067,230...6,131,467 JBrowse link
G Klhl12 kelch like family member 12 ISO (PMID:22358839), (PMID:27716508) UniProtKB PMID:22358839, PMID:27716508 NCBI chrNW_004936567:1,681,421...1,714,150 JBrowse link
G Pdcd6 programmed cell death 6 ISO (PMID:27716508) UniProtKB PMID:27716508 NCBI chrNW_004936815:1,129,367...1,144,020 JBrowse link
G Pef1 penta-EF-hand domain containing 1 ISO (PMID:27716508) UniProtKB PMID:27716508 NCBI chrNW_004936474:14,745,812...14,761,279 JBrowse link
G Preb prolactin regulatory element binding ISO PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chrNW_004936493:5,416,302...5,420,138 JBrowse link
cytochrome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967032 cytochrome b-245 light chain ISO (PMID:7938008) BHF-UCL PMID:7938008 NCBI chrNW_004936641:1,036,967...1,044,954 JBrowse link
G LOC101967907 protoheme IX farnesyltransferase, mitochondrial ISO (MGI:MGI:3604933|PMID:16103131) MGI PMID:16103131 MGI:MGI:3604933 NCBI chrNW_004936724:783,591...905,625 JBrowse link
death-inducing signaling complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO (MGI:MGI:3612236|PMID:16365167) MGI PMID:16365167 MGI:MGI:3612236 NCBI chrNW_004936602:1,089,979...1,114,376 JBrowse link
dense core granule priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101974478 protein unc-13 homolog B ISO PMID:26575293 SynGO-UCL PMID:26575293 RGD:12050107 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Unc13a unc-13 homolog A ISO PMID:26575293 SynGO-UCL PMID:26575293 RGD:12050107 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
G Unc13d unc-13 homolog D ISO PMID:26575293 SynGO-UCL PMID:26575293 RGD:12050107 NCBI chrNW_004936594:1,008,215...1,023,023 JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51 RAD51 recombinase ISO (PMID:26681308) UniProtKB PMID:26681308 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004936641:916,695...925,411 JBrowse link
G Gmnn geminin DNA replication inhibitor ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004936671:1,017,621...1,027,224 JBrowse link
DNA replication-dependent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936658:1,699,150...1,713,079 JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936659:2,772,310...2,782,687 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936588:2,536,141...2,564,897 JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936500:6,262,207...6,288,833 JBrowse link
G Hat1 histone acetyltransferase 1 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936509:2,105,866...2,153,089 JBrowse link
G Ipo4 importin 4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936722:359,741...370,514 JBrowse link
G LOC101956307 histone H3 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:3,131,668...3,132,428 JBrowse link
G LOC101966143 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936580:173,731...175,254 JBrowse link
G LOC101967236 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:2,803,784...2,804,173 JBrowse link
G LOC101972420 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:2,019,007...2,019,428 JBrowse link
G LOC101972801 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,953,045...1,953,612 JBrowse link
G LOC101974797 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,881,645...1,882,070 JBrowse link
G LOC101978127 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936587:2,702,038...2,704,472 JBrowse link
G LOC106145261 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,888,128...1,888,666 JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO (MGI:MGI:3694318|PMID:16728391)
(PMID:14718166)
UniProt
UniProtKB
PMID:14718166, PMID:16728391 MGI:MGI:3694318 NCBI chrNW_004936474:26,710,364...26,743,336 JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936474:15,592,226...15,611,381 JBrowse link
DNA replication-independent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936658:1,699,150...1,713,079 JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936659:2,772,310...2,782,687 JBrowse link
G Atrx ATRX chromatin remodeler ISO (PMID:22391447) UniProtKB PMID:22391447 NCBI chrNW_004936683:2,496,307...2,718,539 JBrowse link
G Cabin1 calcineurin binding protein 1 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936619:890,474...1,030,914 JBrowse link
G Hat1 histone acetyltransferase 1 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936509:2,105,866...2,153,089 JBrowse link
G Ipo4 importin 4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936722:359,741...370,514 JBrowse link
G LOC101957075 protein HIRA ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936619:3,282,170...3,380,151 JBrowse link
G LOC101963041 histone H3.3 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936526:2,835,002...2,842,328 JBrowse link
G LOC101963257 histone H3.3 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936594:959,493...961,703 JBrowse link
G LOC101966143 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936580:173,731...175,254 JBrowse link
G LOC101967236 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:2,803,784...2,804,173 JBrowse link
G LOC101972420 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:2,019,007...2,019,428 JBrowse link
G LOC101972801 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,953,045...1,953,612 JBrowse link
G LOC101974797 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,881,645...1,882,070 JBrowse link
G LOC101978127 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936587:2,702,038...2,704,472 JBrowse link
G LOC106145261 histone H4 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936671:1,888,128...1,888,666 JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936474:26,710,364...26,743,336 JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936474:15,592,226...15,611,381 JBrowse link
G Ubn1 ubinuclein 1 ISO (PMID:14718166) UniProtKB PMID:14718166 NCBI chrNW_004936530:4,795,974...4,826,217 JBrowse link
DNA-templated transcription open complex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taf8 TATA-box binding protein associated factor 8 ISO (PMID:14580349) MGI PMID:14580349 NCBI chrNW_004936476:17,779,474...17,798,465 JBrowse link
dynamin family protein polymerization involved in mitochondrial fission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1l dynamin 1 like ISO (PMID:11514614), (PMID:23530241) UniProtKB PMID:11514614, PMID:23530241 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
G Mief2 mitochondrial elongation factor 2 ISO (PMID:23530241) UniProt PMID:23530241 NCBI chrNW_004936741:1,797,717...1,803,367 JBrowse link
ESCRT III complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:18687924) UniProt PMID:18687924 NCBI chrNW_004936497:2,126,064...2,161,451 JBrowse link
exon-exon junction complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pym1 PYM homolog 1, exon junction complex associated factor ISO (PMID:19410547) HGNC PMID:19410547 NCBI chrNW_004936646:320,864...341,694 JBrowse link
formation of cytoplasmic translation initiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3a eukaryotic translation initiation factor 3 subunit A ISO (MGI:MGI:3843422|PMID:17581632)
(PMID:17581632)
UniProtKB PMID:17581632 MGI:MGI:3843422 NCBI chrNW_004936486:8,501,290...8,536,321 JBrowse link
G Eif3d eukaryotic translation initiation factor 3 subunit D ISO (MGI:MGI:3843422|PMID:17581632) UniProtKB PMID:17581632 MGI:MGI:3843422 NCBI chrNW_004936492:4,256,210...4,270,469 JBrowse link
formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Denr density regulated re-initiation and release factor ISO (PMID:20713520) UniProtKB PMID:20713520 NCBI chrNW_004936558:1,852,775...1,870,576 JBrowse link
G Dhx29 DExH-box helicase 29 ISO (PMID:23047696) CACAO PMID:23047696 NCBI chrNW_004936480:12,458,834...12,504,207 JBrowse link
G Eif2d eukaryotic translation initiation factor 2D ISO (PMID:20713520) UniProtKB PMID:20713520 NCBI chrNW_004936557:5,965,496...5,985,993 JBrowse link
G Eif5 eukaryotic translation initiation factor 5 ISO RGD PMID:8464924, PMID:10805737 RGD:10755758, RGD:728212 NCBI chrNW_004936621:1,772,116...1,779,669 JBrowse link
G Mcts1 MCTS1 re-initiation and release factor ISO (PMID:20713520) UniProtKB PMID:20713520 NCBI chrNW_004936479:9,432,817...9,491,615 JBrowse link
G Rps2 ribosomal protein S2 ISO RGD PMID:344063 RGD:2299070 NCBI chrNW_004936694:2,071,295...2,073,409 JBrowse link
free ubiquitin chain polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:24660806) ParkinsonsUK-UCL PMID:24660806 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004936538:2,741,308...2,757,042 JBrowse link
G Trim6 tripartite motif containing 6 ISO (PMID:24882218) UniProtKB PMID:24882218 NCBI chrNW_004937097:23,695...31,673 JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C ISO (PMID:19822757) UniProtKB PMID:19822757 NCBI chrNW_004936514:7,204,332...7,208,340 JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K ISO (PMID:24882218) UniProtKB PMID:24882218 NCBI chrNW_004936482:7,244,972...7,323,263 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:19822757) UniProtKB PMID:19822757 NCBI chrNW_004936886:643,358...648,293 JBrowse link
Golgi vesicle prefusion complex stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cog4 component of oligomeric golgi complex 4 ISO (PMID:19536132) UniProtKB PMID:19536132 NCBI chrNW_004936475:23,086,406...23,116,203 JBrowse link
heterotrimeric G-protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdcl phosducin like ISO (MGI:MGI:5490935|PMID:23637185) MGI PMID:23637185 MGI:MGI:5490935 NCBI chrNW_004936487:11,309,073...11,323,529 JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236, PMID:14754908, PMID:17305370 NCBI chrNW_004936559:7,177,887...7,312,660 JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chrNW_004936588:460,308...477,382 JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoe apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908, PMID:17305370 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Apom apolipoprotein M ISO (MGI:MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:MGI:3575626 NCBI chrNW_004936727:1,868,751...1,874,347 JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 ISO (MGI:MGI:4454250|PMID:20382126) BHF-UCL PMID:20382126 MGI:MGI:4454250 NCBI chrNW_004936541:8,467,035...8,549,893 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:MGI:3852307|PMID:16556852), (MGI:MGI:5634884|PMID:21481393) BHF-UCL PMID:16556852, PMID:21481393 MGI:MGI:3852307, MGI:MGI:5634884 NCBI chrNW_004936500:1,620,763...1,678,561 JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:21481393) BHF-UCL PMID:21481393 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:14967812), (PMID:8106353) BHF-UCL PMID:8106353, PMID:14967812 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:17438339) BHF-UCL PMID:17438339 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Apoe apolipoprotein E ISO (PMID:12401887) BHF-UCL PMID:12401887 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Apom apolipoprotein M ISO (PMID:18006500)
(MGI:MGI:3575626|PMID:15793583)
BHF-UCL PMID:15793583, PMID:18006500 MGI:MGI:3575626 NCBI chrNW_004936727:1,868,751...1,874,347 JBrowse link
G Cetp cholesteryl ester transfer protein ISO (PMID:2586614)
(PMID:24293641)
BHF-UCL
UniProtKB
PMID:2586614, PMID:24293641 NCBI chrNW_004936475:9,115,126...9,133,071 JBrowse link
G Lcat lecithin-cholesterol acyltransferase ISO (PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) UniProtKB PMID:4335615, PMID:10722751, PMID:12167653, PMID:15210842 NCBI chrNW_004936475:18,294,013...18,297,433 JBrowse link
G Lipc lipase C, hepatic type ISO (PMID:3244012) BHF-UCL
RGD
PMID:3244012, PMID:8157689 RGD:2308770 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) BHF-UCL PMID:19136670 NCBI chrNW_004936497:13,406,402...13,429,833 JBrowse link
G Pla2g3 phospholipase A2 group III ISO (PMID:18801741) UniProt PMID:18801741 NCBI chrNW_004936755:307,166...312,683 JBrowse link
G Pltp phospholipid transfer protein ISO (PMID:24369175), (PMID:29883800), (PMID:9132017) AgBase PMID:9132017, PMID:24369175, PMID:29883800 NCBI chrNW_004936514:7,121,023...7,131,475 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (MGI:MGI:3056693|PMID:15210842), (MGI:MGI:5634884|PMID:21481393) BHF-UCL PMID:15210842, PMID:21481393 MGI:MGI:3056693, MGI:MGI:5634884 NCBI chrNW_004936558:530,828...555,098 JBrowse link
histone displacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brdt bromodomain testis associated ISO (MGI:MGI:5447877|PMID:22922464) UniProtKB PMID:22922464 MGI:MGI:5447877 NCBI chrNW_004936537:7,040,993...7,104,245 JBrowse link
histone exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32e acidic nuclear phosphoprotein 32 family member E ISO (PMID:24463511) UniProtKB PMID:24463511 NCBI chrNW_004936580:519,135...526,079 JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO (MGI:MGI:3693383|PMID:12509435) UniProtKB PMID:12509435 MGI:MGI:3693383 NCBI chrNW_004936474:26,710,364...26,743,336 JBrowse link
G Ptma prothymosin alpha ISO (MGI:MGI:4457993|PMID:20434447) MGI PMID:20434447 MGI:MGI:4457993 NCBI chrNW_004936525:5,253,723...5,258,300 JBrowse link
G Rnf8 ring finger protein 8 ISO (MGI:MGI:4441228|PMID:20153262) UniProtKB PMID:20153262 MGI:MGI:4441228 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 ISO (PMID:26109053) UniProtKB PMID:26109053 NCBI chrNW_004936528:667,453...689,291 JBrowse link
G Vps72 vacuolar protein sorting 72 homolog ISO (PMID:26974126) UniProt PMID:26974126 NCBI chrNW_004936580:1,381,454...1,395,319 JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004936541:1,259,422...1,263,885 JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:23255504)
(MGI:MGI:6111002|PMID:29317443)
SYSCILIA_CCNET
MGI
PMID:23255504, PMID:29317443 MGI:MGI:6111002 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (PMID:23255504) SYSCILIA_CCNET PMID:23255504 NCBI chrNW_004936594:4,075,105...4,124,850 JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 ISO (PMID:19944400) BHF-UCL PMID:19944400 NCBI chrNW_004936641:3,656,331...3,674,907 JBrowse link
G Dnaaf2 dynein axonemal assembly factor 2 ISO (MGI:MGI:5514194|PMID:23525783) MGI PMID:23525783 MGI:MGI:5514194 NCBI chrNW_004936583:386,806...394,650 JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 ISO (MGI:MGI:5544549|PMID:23872636)
(PMID:23872636)
UniProtKB PMID:23872636 MGI:MGI:5544549 NCBI chrNW_004936471:16,911,575...16,960,521 JBrowse link
G Dnaaf5 dynein axonemal assembly factor 5 ISO (PMID:25232951) UniProtKB PMID:25232951 NCBI chrNW_004936754:978,726...1,034,748 JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 ISO (PMID:28176794) UniProt PMID:28176794 NCBI chrNW_004936499:7,463,225...7,503,322 JBrowse link
G Dnah1 dynein axonemal heavy chain 1 ISO (PMID:24360805) SYSCILIA_CCNET PMID:24360805 NCBI chrNW_004936473:3,170,060...3,238,608 JBrowse link
G Dnah7 dynein axonemal heavy chain 7 ISO (PMID:11877439) SYSCILIA_CCNET PMID:11877439 NCBI chrNW_004936506:3,001,304...3,298,241 JBrowse link
G Lrrc6 leucine rich repeat containing 6 ISO (PMID:23122589) BHF-UCL PMID:23122589 NCBI chrNW_004936470:16,557,381...16,640,519 JBrowse link
G Tekt2 tektin 2 ISO (MGI:MGI:3054498|PMID:15340058) MGI PMID:15340058 MGI:MGI:3054498 NCBI chrNW_004936474:18,576,133...18,579,926 JBrowse link
G Zmynd10 zinc finger MYND-type containing 10 ISO (PMID:23891469), (PMID:23891471)
(MGI:MGI:6284218|PMID:29916806)
(MGI:MGI:6154799|PMID:29601588)
UniProtKB
MGI
PMID:23891469, PMID:23891471, PMID:29601588, PMID:29916806 MGI:MGI:6154799, MGI:MGI:6284218 NCBI chrNW_004936529:1,866,258...1,870,162 JBrowse link
integrin activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col16a1 collagen type XVI alpha 1 chain ISO (PMID:16754661) CACAO PMID:16754661 NCBI chrNW_004936474:14,769,029...14,817,342 JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO (PMID:23125415) UniProtKB PMID:23125415 NCBI chrNW_004936475:9,443,851...9,454,715 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO (PMID:29301984) UniProtKB PMID:29301984 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G Fermt2 fermitin family member 2 ISO (MGI:MGI:3789779|PMID:18483218)
(PMID:22030399)
UniProtKB PMID:18483218, PMID:22030399 MGI:MGI:3789779 NCBI chrNW_004936697:1,927,817...2,008,268 JBrowse link
G Fermt3 fermitin family member 3 ISO (PMID:19234463)
(MGI:MGI:3783912|PMID:18278053), (MGI:MGI:3838441|PMID:19234461)
(PMID:19234460)
UniProtKB PMID:18278053, PMID:19234460, PMID:19234461, PMID:19234463 MGI:MGI:3783912, MGI:MGI:3838441 NCBI chrNW_004936599:4,975,435...4,989,225 JBrowse link
G Fn1 fibronectin 1 ISO (PMID:24658351) UniProtKB PMID:24658351 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 ISO (MGI:MGI:5486544|PMID:18227284) UniProtKB PMID:18227284 MGI:MGI:5486544 NCBI chrNW_004936532:5,802,761...5,814,226 JBrowse link
G Mzb1 marginal zone B and B1 cell specific protein ISO (MGI:MGI:4866969|PMID:21093319) UniProtKB PMID:21093319 MGI:MGI:4866969 NCBI chrNW_004936531:8,474,721...8,477,479 JBrowse link
G Tln1 talin 1 ISO (MGI:MGI:4439219|PMID:20150896) CAFA PMID:20150896 MGI:MGI:4439219 NCBI chrNW_004936524:3,693,679...3,727,055 JBrowse link
intermediate filament polymerization or depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nefl neurofilament light ISO RGD PMID:10362553 RGD:9698446 NCBI chrNW_004936757:1,642,122...1,646,499 JBrowse link
G Nefm neurofilament medium ISO RGD PMID:10362553 RGD:9698446 NCBI chrNW_004936757:1,662,905...1,668,707 JBrowse link
kinetochore assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpa centromere protein A ISO (PMID:11682612) BHF-UCL PMID:11682612 NCBI chrNW_004936493:5,715,274...5,720,816 JBrowse link
G Cenpc centromere protein C ISO (PMID:21529714) UniProtKB PMID:21529714 NCBI chrNW_004936582:920,852...978,167 JBrowse link
G Cenpe centromere protein E ISO (PMID:9763420) UniProt PMID:9763420 NCBI chrNW_004936520:188,601...265,904 JBrowse link
G Cenpt centromere protein T ISO (PMID:21529714) UniProtKB PMID:21529714 NCBI chrNW_004936475:18,198,725...18,204,257 JBrowse link
G Cenpw centromere protein W ISO (PMID:21695110) UniProtKB PMID:21695110 NCBI chrNW_004936639:3,173,832...3,184,439 JBrowse link
G Mis12 MIS12 kinetochore complex component ISO (PMID:16585270) UniProtKB PMID:16585270 NCBI chrNW_004936677:2,323,540...2,328,689 JBrowse link
G Pogz pogo transposable element derived with ZNF domain ISO (PMID:20562864) UniProtKB PMID:20562864 NCBI chrNW_004936580:1,613,425...1,650,849 JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 ISO (MGI:MGI:5805564|PMID:27760146) MGI PMID:27760146 MGI:MGI:5805564 NCBI chrNW_004936496:7,149,501...7,182,771 JBrowse link
lipid tube assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 ISO (PMID:19004523) Alzheimers_University_of_Toronto PMID:19004523 NCBI chrNW_004936469:44,128,308...44,185,739 JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:17948057) UniProtKB PMID:17948057 NCBI chrNW_004936489:9,736,255...9,804,841 JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:MGI:3852307|PMID:16556852) BHF-UCL PMID:16556852 MGI:MGI:3852307 NCBI chrNW_004936500:1,620,763...1,678,561 JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:8106353) BHF-UCL PMID:8106353 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apob apolipoprotein B ISO (PMID:15797858) BHF-UCL PMID:15797858 NCBI chrNW_004936493:10,509,118...10,549,144 JBrowse link
G Apoe apolipoprotein E ISO (MGI:MGI:3850619|PMID:15654758) BHF-UCL PMID:15654758 MGI:MGI:3850619 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Cetp cholesteryl ester transfer protein ISO (PMID:2833496) BHF-UCL PMID:2833496 NCBI chrNW_004936475:9,115,126...9,133,071 JBrowse link
G Lipc lipase C, hepatic type ISO (PMID:3244012)
PMID:9685400
RGD
BHF-UCL
PMID:3244012, PMID:8071607, PMID:9685400 RGD:2308763, RGD:2308769 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G LOC101960864 group 10 secretory phospholipase A2 ISO (PMID:12021277) UniProt PMID:12021277 NCBI chrNW_004936501:2,841,209...2,857,570 JBrowse link
G Mpo myeloperoxidase ISO (PMID:10772654) BHF-UCL PMID:10772654 NCBI chrNW_004936490:4,809,773...4,819,070 JBrowse link
G Mttp microsomal triglyceride transfer protein ISO (MGI:MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:MGI:6095248 NCBI chrNW_004936520:3,337,726...3,417,818 JBrowse link
G Pla2g12b phospholipase A2 group XIIB ISO (MGI:MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:MGI:6095248 NCBI chrNW_004936521:6,072,487...6,096,791 JBrowse link
G Pla2g2e phospholipase A2 group IIE ISO (MGI:MGI:5605113|PMID:24910243) MGI PMID:24910243 MGI:MGI:5605113 NCBI chrNW_004936474:6,016,526...6,020,170 JBrowse link
G Pla2g3 phospholipase A2 group III ISO (PMID:18801741) UniProt PMID:18801741 NCBI chrNW_004936755:307,166...312,683 JBrowse link
G Pla2g5 phospholipase A2 group V ISO (MGI:MGI:6393145|PMID:14962950)
(MGI:MGI:5605113|PMID:24910243)
UniProt
MGI
PMID:14962950, PMID:24910243 MGI:MGI:5605113, MGI:MGI:6393145 NCBI chrNW_004936474:6,131,915...6,150,810 JBrowse link
G Pla2g7 phospholipase A2 group VII ISO (PMID:8624782) BHF-UCL PMID:8624782 NCBI chrNW_004936476:13,609,847...13,646,174 JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 ISO (MGI:MGI:5805564|PMID:27760146) MGI PMID:27760146 MGI:MGI:5805564 NCBI chrNW_004936496:7,149,501...7,182,771 JBrowse link
messenger ribonucleoprotein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO (PMID:29276085) UniProtKB PMID:29276085 NCBI chrNW_004936545:7,045,043...7,077,710 JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO (PMID:29276085) UniProtKB PMID:29276085 NCBI chrNW_004936581:1,629,078...1,651,147 JBrowse link
G Nudt21 nudix hydrolase 21 ISO (PMID:29276085) UniProtKB PMID:29276085 NCBI chrNW_004936475:8,739,992...8,759,165 JBrowse link
MHC class I protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein ISO RGD PMID:12407112 RGD:633939 NCBI chrNW_004936476:25,554,186...25,566,634 JBrowse link
MHC class Ib protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein ISO (PMID:12582157) UniProt PMID:12582157 NCBI chrNW_004936476:25,554,186...25,566,634 JBrowse link
MHC class II protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain ISO (PMID:8139689) UniProtKB PMID:8139689 NCBI chrNW_004936476:25,846,653...25,852,006 JBrowse link
microtubule depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 NOT ISO (MGI:MGI:5607363|PMID:24949858) UniProtKB PMID:24949858 MGI:MGI:5607363 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Kif18a kinesin family member 18A ISO (PMID:17346968) UniProtKB PMID:17346968 NCBI chrNW_004936533:9,173,739...9,242,928 JBrowse link
G Kif18b kinesin family member 18B ISO (PMID:21820309) UniProtKB PMID:21820309 NCBI chrNW_004936541:1,285,137...1,304,179 JBrowse link
G Kif24 kinesin family member 24 ISO (PMID:21620453) UniProtKB PMID:21620453 NCBI chrNW_004936524:2,375,133...2,417,096 JBrowse link
G Kif2b kinesin family member 2B ISO (PMID:19060894) UniProtKB PMID:19060894 NCBI chrNW_004936490:8,409,068...8,411,119 JBrowse link
G Kif2c kinesin family member 2C ISO (PMID:21820309)
(PMID:19060894)
UniProtKB PMID:19060894, PMID:21820309 NCBI chrNW_004936474:25,967,095...26,000,678 JBrowse link
G Nckap5l NCK associated protein 5 like ISO (PMID:26485573) UniProtKB PMID:26485573 NCBI chrNW_004936512:7,470,425...7,504,421 JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 ISO RGD PMID:16982696 RGD:1642763 NCBI chrNW_004936560:1,979,804...2,009,167 JBrowse link
G Stmn1 stathmin 1 ISO (PMID:10675326)
(PMID:9880330)
CAFA
MGI
PMID:9880330, PMID:10675326 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
microtubule nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 ISO (PMID:19242490) UniProtKB PMID:19242490 NCBI chrNW_004936621:2,247,082...2,374,407 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:17543864) UniProtKB PMID:17543864 NCBI chrNW_004936469:49,067,357...49,335,212 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO (PMID:17543864) UniProtKB PMID:17543864 NCBI chrNW_004936473:23,756,291...23,940,966 JBrowse link
G Csnk1d casein kinase 1 delta ISO (PMID:24648492) SYSCILIA_CCNET PMID:24648492 NCBI chrNW_004936594:5,720,887...5,743,206 JBrowse link
G Golga2 golgin A2 ISO (PMID:26165940)
(PMID:19242490)
UniProtKB PMID:19242490, PMID:26165940 NCBI chrNW_004936487:15,798,623...15,814,360 JBrowse link
G Nde1 nudE neurodevelopment protein 1 ISO (MGI:MGI:1928549|PMID:11163258) MGI PMID:11163258 MGI:MGI:1928549 NCBI chrNW_004936501:3,193,962...3,234,640 JBrowse link
G Slain2 SLAIN motif family member 2 ISO (PMID:21646404) UniProtKB PMID:21646404 NCBI chrNW_004936482:14,396,635...14,455,204 JBrowse link
G Tpx2 TPX2 microtubule nucleation factor ISO (PMID:26414402) CACAO PMID:26414402 NCBI chrNW_004936485:18,718,801...18,773,315 JBrowse link
G Tubgcp5 tubulin gamma complex associated protein 5 ISO (PMID:11694571) UniProtKB PMID:11694571 NCBI chrNW_004936471:38,180,670...38,215,972 JBrowse link
G Tubgcp6 tubulin gamma complex associated protein 6 ISO (PMID:11694571) UniProtKB PMID:11694571 NCBI chrNW_004936629:568,014...587,726 JBrowse link
microtubule nucleation by microtubule organizing center term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tppp tubulin polymerization promoting protein ISO (PMID:31522887) UniProt PMID:31522887 NCBI chrNW_004936815:842,279...882,985 JBrowse link
microtubule polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 ISO RGD PMID:16480946 RGD:1582162 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Cenpj centromere protein J ISO (PMID:15047868) UniProtKB PMID:15047868 NCBI chrNW_004936720:2,149,296...2,201,599 JBrowse link
G Fbxo5 F-box protein 5 ISO (MGI:MGI:3701159|PMID:17190794) MGI PMID:17190794 MGI:MGI:3701159 NCBI chrNW_004936489:5,589,621...5,602,221 JBrowse link
G Fgf13 fibroblast growth factor 13 ISO (MGI:MGI:5431268|PMID:22726441) UniProtKB PMID:22726441 MGI:MGI:5431268 NCBI chrNW_004936513:8,419,588...8,911,010 JBrowse link
G Hdgfl3 HDGF like 3 ISO (MGI:MGI:3849122|PMID:19237540) UniProtKB PMID:19237540 MGI:MGI:3849122 NCBI chrNW_004936483:17,769,831...17,830,541 JBrowse link
G Map7d3 MAP7 domain containing 3 ISO (PMID:24927501) UniProtKB PMID:24927501 NCBI chrNW_004936513:10,989,123...11,021,086 JBrowse link
G Mapre1 microtubule associated protein RP/EB family member 1 ISO (MGI:MGI:6355670|PMID:24706950) UniProt PMID:24706950 MGI:MGI:6355670 NCBI chrNW_004936485:19,577,859...19,608,036 JBrowse link
G Mapt microtubule associated protein tau ISO (PMID:26996940) ARUK-UCL PMID:26996940 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 NOT ISO (PMID:26996940) ARUK-UCL PMID:26996940 NCBI chrNW_004936659:309,530...321,294 JBrowse link
G Tppp tubulin polymerization promoting protein ISO (MGI:MGI:4361981|PMID:18028908)
(PMID:18028908)
UniProtKB PMID:18028908 MGI:MGI:4361981 NCBI chrNW_004936815:842,279...882,985 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chrNW_004936769:1,424,526...1,447,547 JBrowse link
miRNA loading onto RISC involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific ISO (PMID:23622242) MGI PMID:23622242 NCBI chrNW_004936580:4,183,016...4,208,341 JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO (PMID:18178619), (PMID:19966796) BHF-UCL PMID:18178619, PMID:19966796 NCBI chrNW_004936470:10,641,109...10,690,587 JBrowse link
G Ago4 argonaute RISC component 4 ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004936474:18,335,536...18,371,398 JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (PMID:18178619) BHF-UCL PMID:18178619 NCBI chrNW_004936846:528,768...584,599 JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex ISO (PMID:18178619) BHF-UCL PMID:18178619 NCBI chrNW_004936512:10,774,793...10,780,041 JBrowse link
mitochondrial cytochrome c oxidase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apopt1 apoptogenic 1, mitochondrial ISO (PMID:30552096)
(MGI:MGI:6355662|PMID:30552096)
(PMID:25175347)
UniProt PMID:25175347, PMID:30552096 MGI:MGI:6355662 NCBI chrNW_004936621:1,543,290...1,572,182 JBrowse link
G Fastkd3 FAST kinase domains 3 ISO (PMID:27789713) UniProtKB PMID:27789713 NCBI chrNW_004936643:369,145...379,691 JBrowse link
G LOC101956167 cytochrome c oxidase assembly protein COX14 ISO (PMID:22243966) UniProtKB PMID:22243966 NCBI chrNW_004936512:7,776,321...7,776,784 JBrowse link
G LOC101957904 cytochrome c oxidase protein 20 homolog ISO (PMID:23125284), (PMID:24403053) UniProtKB PMID:23125284, PMID:24403053 NCBI chrNW_004936526:6,031,038...6,063,842 JBrowse link
G LOC101961358 mitochondrial chaperone BCS1 ISO (PMID:18628306) UniProtKB PMID:18628306 NCBI chrNW_004936569:1,104,493...1,108,708 JBrowse link
G LOC101962609 protein SCO2 homolog, mitochondrial ISO (PMID:15229189) UniProtKB PMID:15229189 NCBI chrNW_004936629:318,581...320,804 JBrowse link
G LOC101967120 mitochondrial inner membrane protein COX18 ISO (PMID:28330871) UniProtKB PMID:28330871 NCBI chrNW_004936598:2,343,103...2,354,226 JBrowse link
G LOC101970652 translational activator of cytochrome c oxidase 1 ISO (MGI:MGI:5881987|PMID:27319982) MGI PMID:27319982 MGI:MGI:5881987 NCBI chrNW_004936541:4,260,635...4,268,409 JBrowse link
G LOC101971854 surfeit locus protein 1 ISO (PMID:24027061) UniProtKB PMID:24027061 NCBI chrNW_004936669:3,527,741...3,532,087 JBrowse link
G LOC101972068 cytochrome c oxidase assembly factor 3 homolog, mitochondrial ISO (PMID:23260140) UniProtKB PMID:23260140 NCBI chrNW_004936490:17,508,663...17,509,538 JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial ISO (PMID:15229189)
(MGI:MGI:5643882|PMID:25683716)
UniProtKB
MGI
PMID:15229189, PMID:25683716 MGI:MGI:5643882 NCBI chrNW_004936595:3,523,789...3,537,933 JBrowse link
G LOC101975509 cytochrome c oxidase copper chaperone ISO (PMID:19393246) CAFA PMID:19393246 NCBI chrNW_004936536:6,575,010...6,596,172 JBrowse link
G Smim20 small integral membrane protein 20 ISO (PMID:26321642) UniProtKB PMID:26321642 NCBI chrNW_004936477:3,746,766...3,755,075 JBrowse link
G Timm21 translocase of inner mitochondrial membrane 21 ISO (PMID:23260140) UniProtKB PMID:23260140 NCBI chrNW_004936616:4,263,912...4,271,927 JBrowse link
mitochondrial large ribosomal subunit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx28 DEAD-box helicase 28 ISO (PMID:25683715) UniProtKB PMID:25683715 NCBI chrNW_004936475:18,351,924...18,353,793 JBrowse link
G Dhx30 DExH-box helicase 30 ISO (PMID:25683715) UniProtKB PMID:25683715 NCBI chrNW_004936596:1,419,165...1,454,797 JBrowse link
G Fastkd2 FAST kinase domains 2 ISO (PMID:25683715) UniProtKB PMID:25683715 NCBI chrNW_004936631:3,074,719...3,099,233 JBrowse link
mitochondrial proton-transporting ATP synthase complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1d ATP synthase F1 subunit delta ISO (PMID:29478781) UniProt PMID:29478781 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein ISO (PMID:17936786) UniProtKB PMID:17936786 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Tmem70 transmembrane protein 70 ISO (PMID:18953340) UniProtKB PMID:18953340 NCBI chrNW_004936648:2,636,667...2,650,311 JBrowse link
mitochondrial respirasome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Higd2a HIG1 hypoxia inducible domain family member 2A ISO (MGI:MGI:5316319|PMID:22405070) MGI PMID:22405070 MGI:MGI:5316319 NCBI chrNW_004936597:661,740...662,752 JBrowse link
G LOC101958099 cytochrome c oxidase subunit 7A-related protein, mitochondrial ISO (MGI:MGI:5502810|PMID:23812712), (MGI:MGI:5607399|PMID:23857330) UniProtKB PMID:23812712, PMID:23857330 MGI:MGI:5502810, MGI:MGI:5607399 NCBI chrNW_004936508:9,279,974...9,287,279 JBrowse link
mitochondrial respiratory chain complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO (MGI:MGI:6114310|PMID:26004228)
(PMID:26004228)
UniProt PMID:26004228 MGI:MGI:6114310 NCBI chrNW_004936479:1,441,508...1,477,133 JBrowse link
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ISO (MGI:MGI:6114310|PMID:26004228)
(PMID:26004228)
UniProt PMID:26004228 MGI:MGI:6114310 NCBI chrNW_004936602:93,126...99,695 JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 ISO (MGI:MGI:5299279|PMID:21824519) MGI PMID:21824519 MGI:MGI:5299279 NCBI chrNW_004936653:3,268,229...3,543,173 JBrowse link
G Oma1 OMA1 zinc metallopeptidase ISO (MGI:MGI:6217514|PMID:26365306) UniProt PMID:26365306 MGI:MGI:6217514 NCBI chrNW_004936522:3,232,877...3,294,832 JBrowse link
G Samm50 SAMM50 sorting and assembly machinery component ISO (PMID:22252321) UniProtKB PMID:22252321 NCBI chrNW_004936718:1,642,994...1,668,458 JBrowse link
G Tfam transcription factor A, mitochondrial ISO (MGI:MGI:3758560|PMID:11259653) MGI PMID:11259653 MGI:MGI:3758560 NCBI chrNW_004936614:4,595,973...4,605,040 JBrowse link
mitochondrial respiratory chain complex I assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad9 acyl-CoA dehydrogenase family member 9 ISO (PMID:20816094) UniProtKB PMID:20816094 NCBI chrNW_004936798:83,952...106,381 JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO (PMID:20111043) UniProtKB PMID:20111043 NCBI chrNW_004936479:1,441,508...1,477,133 JBrowse link
G Dmac1 distal membrane arm assembly complex 1 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936539:2,099,563...2,100,968 JBrowse link
G Dmac2 distal membrane arm assembly complex 2 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936661:3,824,379...3,826,411 JBrowse link
G Foxred1 FAD dependent oxidoreductase domain containing 1 ISO (PMID:25678554) UniProtKB PMID:25678554 NCBI chrNW_004936572:5,943,309...5,950,476 JBrowse link
G LOC101961358 mitochondrial chaperone BCS1 ISO (PMID:18628306) UniProtKB PMID:18628306 NCBI chrNW_004936569:1,104,493...1,108,708 JBrowse link
G Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936479:10,074,290...10,078,072 JBrowse link
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936745:1,436,257...1,471,785 JBrowse link
G Ndufa11 NADH:ubiquinone oxidoreductase subunit A11 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936588:3,383,674...3,389,862 JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 ISO (PMID:25901006), (PMID:27626371) UniProtKB PMID:25901006, PMID:27626371 NCBI chrNW_004936596:1,946,058...1,953,734 JBrowse link
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936531:9,587,139...9,589,007 JBrowse link
G Ndufa3 NADH:ubiquinone oxidoreductase subunit A3 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936994:232,913...234,939 JBrowse link
G Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936605:1,915,246...1,928,853 JBrowse link
G Ndufa6 NADH:ubiquinone oxidoreductase subunit A6 ISO (PMID:30245030) UniProt PMID:30245030 NCBI chrNW_004936718:60,797...67,614 JBrowse link
G Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936487:10,542,484...10,557,199 JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936606:4,794,701...4,825,696 JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936501:8,232,920...8,240,675 JBrowse link
G Ndufaf1 NADH:ubiquinone oxidoreductase complex assembly factor 1 ISO (PMID:16218961) UniProt PMID:16218961 NCBI chrNW_004936471:4,733,707...4,750,390 JBrowse link
G Ndufaf3 NADH:ubiquinone oxidoreductase complex assembly factor 3 ISO (PMID:19463981) UniProtKB PMID:19463981 NCBI chrNW_004936529:746,620...748,145 JBrowse link
G Ndufaf4 NADH:ubiquinone oxidoreductase complex assembly factor 4 ISO (PMID:18179882) UniProtKB PMID:18179882 NCBI chrNW_004936699:829,441...834,709 JBrowse link
G Ndufaf5 NADH:ubiquinone oxidoreductase complex assembly factor 5 ISO (PMID:18940309), (PMID:27226634) UniProtKB PMID:18940309, PMID:27226634 NCBI chrNW_004936485:5,994,388...6,025,042 JBrowse link
G Ndufaf6 NADH:ubiquinone oxidoreductase complex assembly factor 6 ISO (PMID:22019594) UniProtKB PMID:22019594 NCBI chrNW_004936544:7,983,093...8,008,442 JBrowse link
G Ndufaf7 NADH:ubiquinone oxidoreductase complex assembly factor 7 ISO (PMID:20406883), (PMID:24089531), (PMID:24838397) UniProtKB PMID:20406883, PMID:24089531, PMID:24838397 NCBI chrNW_004936663:1,049,493...1,062,236 JBrowse link
G Ndufaf8 NADH:ubiquinone oxidoreductase complex assembly factor 8 ISO (PMID:27499296) UniProtKB PMID:27499296 NCBI chrNW_004936594:4,949,826...4,952,248 JBrowse link
G Ndufb10 NADH:ubiquinone oxidoreductase subunit B10 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936694:2,073,481...2,075,989 JBrowse link
G Ndufb11 NADH:ubiquinone oxidoreductase subunit B11 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936502:12,921,371...12,923,702 JBrowse link
G Ndufb2 NADH:ubiquinone oxidoreductase subunit B2 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936592:4,711,790...4,716,829 JBrowse link
G Ndufb3 NADH:ubiquinone oxidoreductase subunit B3 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936726:338,384...349,943 JBrowse link
G Ndufb4 NADH:ubiquinone oxidoreductase subunit B4 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936536:7,291,906...7,298,490 JBrowse link
G Ndufb5 NADH:ubiquinone oxidoreductase subunit B5 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936566:3,537,983...3,547,807 JBrowse link
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936524:1,231,744...1,243,783 JBrowse link
G Ndufb7 NADH:ubiquinone oxidoreductase subunit B7 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936659:3,081,009...3,084,737 JBrowse link
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936600:5,122,004...5,126,776 JBrowse link
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936470:23,118,162...23,123,648 JBrowse link
G Ndufc1 NADH:ubiquinone oxidoreductase subunit C1 ISO (PMID:27626371) UniProtKB PMID:27626371 NCBI chrNW_004936535:8,307,177...8,313,237 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO (PMID:27626371) RGD
UniProtKB
PMID:26888427, PMID:27626371 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 ISO (PMID:11112787), (PMID:15038602)
(MGI:MGI:3785335|PMID:18396137)
UniProtKB
MGI
PMID:11112787, PMID:15038602, PMID:18396137 MGI:MGI:3785335 NCBI chrNW_004936480:13,829,093...13,932,202 JBrowse link
G Ndufs5 NADH:ubiquinone oxidoreductase subunit S5 ISO (PMID:11112787), (PMID:27626371) UniProtKB PMID:11112787, PMID:27626371 NCBI chrNW_004936474:21,004,476...21,012,742 JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 ISO (MGI:MGI:6098987|PMID:23320803) MGI PMID:23320803 MGI:MGI:6098987 NCBI chrNW_004936815:144,994...157,788 JBrowse link
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 ISO (PMID:11112787) UniProtKB PMID:11112787 NCBI chrNW_004936588:715,093...720,035 JBrowse link
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 ISO (PMID:11112787), (PMID:15159508) UniProtKB PMID:11112787, PMID:15159508 NCBI chrNW_004936599:2,081,493...2,085,635 JBrowse link
G Nubpl nucleotide binding protein like ISO (PMID:19752196) UniProtKB PMID:19752196 NCBI chrNW_004936494:6,141,444...6,365,537 JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein ISO (PMID:17936786), (PMID:20601428) UniProtKB PMID:17936786, PMID:20601428 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Taz tafazzin ISO (PMID:16857210) HGNC PMID:16857210 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
G Timm21 translocase of inner mitochondrial membrane 21 ISO (PMID:23260140) UniProtKB PMID:23260140 NCBI chrNW_004936616:4,263,912...4,271,927 JBrowse link
G Tmem126b transmembrane protein 126B ISO (PMID:27374773) UniProt PMID:27374773 NCBI chrNW_004936498:13,519,751...13,526,770 JBrowse link
mitochondrial respiratory chain complex II assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdhaf1 succinate dehydrogenase complex assembly factor 1 ISO (PMID:19465911) UniProtKB PMID:19465911 NCBI chrNW_004936922:32,655...33,795 JBrowse link
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 ISO (MGI:MGI:5605436|PMID:24954416)
(PMID:24954416)
UniProtKB PMID:24954416 MGI:MGI:5605436 NCBI chrNW_004936618:2,451,717...2,461,676 JBrowse link
mitochondrial respiratory chain complex III assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH12orf73 chromosome unknown C12orf73 homolog ISO (PMID:32161263)
(MGI:MGI:6401640|PMID:32161263)
UniProt PMID:32161263 MGI:MGI:6401640 NCBI chrNW_004936492:10,505,313...10,512,107 JBrowse link
G LOC101961358 mitochondrial chaperone BCS1 ISO (PMID:18628306)
(MGI:MGI:5446800|PMID:21274865)
UniProtKB
MGI
PMID:18628306, PMID:21274865 MGI:MGI:5446800 NCBI chrNW_004936569:1,104,493...1,108,708 JBrowse link
G LOC101965457 ubiquinol-cytochrome-c reductase complex assembly factor 3 ISO (PMID:25605331) UniProtKB PMID:25605331 NCBI chrNW_004936581:590,503...591,225 JBrowse link
G LOC101971618 ubiquinol-cytochrome-c reductase complex assembly factor 1 ISO (PMID:24385928) UniProtKB PMID:24385928 NCBI chrNW_004936561:5,358,954...5,453,583 JBrowse link
G LOC101975274 ubiquinol-cytochrome-c reductase complex assembly factor 2 ISO (PMID:24385928) UniProtKB PMID:24385928 NCBI chrNW_004936476:25,241,426...25,254,057 JBrowse link
G Lyrm7 LYR motif containing 7 ISO (PMID:23168492) UniProtKB PMID:23168492 NCBI chrNW_004936647:3,812,284...3,837,754 JBrowse link
G Slc25a33 solute carrier family 25 member 33 ISO (PMID:20453889) UniProtKB PMID:20453889 NCBI chrNW_004936623:3,585,372...3,603,515 JBrowse link
G Ttc19 tetratricopeptide repeat domain 19 ISO (PMID:21278747) UniProtKB PMID:21278747 NCBI chrNW_004936821:524,183...566,953 JBrowse link
mitochondrial translational termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrpl58 mitochondrial ribosomal protein L58 ISO (PMID:20186120) UniProtKB PMID:20186120 NCBI chrNW_004936594:336,009...342,665 JBrowse link
mitotic spindle microtubule depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccsap centriole, cilia and spindle associated protein ISO (PMID:26562023) UniProtKB PMID:26562023 NCBI chrNW_004936484:20,271,834...20,277,945 JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slu7 SLU7 homolog, splicing factor ISO (PMID:15728250) HGNC PMID:15728250 NCBI chrNW_004936515:3,172,962...3,179,915 JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psip1 PC4 and SFRS1 interacting protein 1 ISO (PMID:9885563) UniProtKB PMID:9885563 NCBI chrNW_004936539:8,894,285...8,940,831 JBrowse link
G Sfswap splicing factor SWAP ISO (MGI:MGI:84585|PMID:8940107) MGI PMID:8940107 MGI:MGI:84585 NCBI chrNW_004936660:2,055,180...2,121,008 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO (PMID:8940107), (PMID:9885563) UniProtKB PMID:8940107, PMID:9885563 NCBI chrNW_004936490:5,055,258...5,059,118 JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 ISO (PMID:11684676) UniProtKB PMID:11684676 NCBI chrNW_004936510:3,077,940...3,095,985 JBrowse link
mRNA splice site selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 ISO (MGI:MGI:1930458|PMID:11158314)
(PMID:11158314)
MGI
UniProtKB
PMID:11158314 MGI:MGI:1930458 NCBI chrNW_004936562:1,699,774...1,785,285 JBrowse link
G Celf2 CUGBP Elav-like family member 2 ISO (MGI:MGI:1930458|PMID:11158314)
(PMID:11158314)
MGI
UniProtKB
PMID:11158314 MGI:MGI:1930458 NCBI chrNW_004936484:3,904,726...4,401,560 JBrowse link
G Celf4 CUGBP Elav-like family member 4 ISO (MGI:MGI:1930458|PMID:11158314) MGI PMID:11158314 MGI:MGI:1930458 NCBI chrNW_004936517:8,010,133...8,010,721 JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor ISO (PMID:19641227) UniProtKB PMID:19641227 NCBI chrNW_004936580:5,167,930...5,188,334 JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 ISO (MGI:MGI:2682447|PMID:14671308), (MGI:MGI:3655436|PMID:16717059) MGI PMID:14671308, PMID:16717059 MGI:MGI:2682447, MGI:MGI:3655436 NCBI chrNW_004936519:419,332...580,706 JBrowse link
G Nol3 nucleolar protein 3 ISO (PMID:10196175) UniProtKB PMID:10196175 NCBI chrNW_004936475:17,644,299...17,648,213 JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO (MGI:MGI:1859428|PMID:10829067)
(MGI:MGI:5430666|PMID:22802532)
MGI PMID:10829067, PMID:22802532 MGI:MGI:1859428, MGI:MGI:5430666 NCBI chrNW_004936537:2,676,920...2,748,568 JBrowse link
G Rbmx RNA binding motif protein X-linked ISO RGD PMID:19282290 RGD:2316827 NCBI chrNW_004936513:10,429,862...10,442,509 JBrowse link
G Setx senataxin ISO (PMID:19515850) UniProtKB PMID:19515850 NCBI chrNW_004936487:18,858,384...18,945,253 JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (PMID:9774382) UniProtKB PMID:9774382 NCBI chrNW_004936474:9,068,012...9,079,717 JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO (PMID:12549914) UniProtKB PMID:12549914 NCBI chrNW_004936530:3,086,944...3,092,780 JBrowse link
G Ythdc1 YTH domain containing 1 ISO (PMID:20167602) UniProtKB PMID:20167602 NCBI chrNW_004936582:130,593...161,275 JBrowse link
myosin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mybpc3 myosin binding protein C3 ISO (MGI:MGI:3710921|PMID:17254601) MGI PMID:17254601 MGI:MGI:3710921 NCBI chrNW_004936562:1,871,194...1,890,092 JBrowse link
G Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 ISO RGD PMID:18348285 RGD:2314690 NCBI chrNW_004936717:233,696...380,963 JBrowse link
NADH dehydrogenase complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndufaf4 NADH:ubiquinone oxidoreductase complex assembly factor 4 ISO (MGI:MGI:5514315|PMID:23702311) MGI PMID:23702311 MGI:MGI:5514315 NCBI chrNW_004936699:829,441...834,709 JBrowse link
negative regulation of actin filament depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 ISO RGD PMID:15252126 RGD:2306210 NCBI chrNW_004936599:3,678,724...3,682,314 JBrowse link
G Lima1 LIM domain and actin binding 1 ISO (PMID:12566430) UniProtKB PMID:12566430 NCBI chrNW_004936512:7,812,856...7,851,859 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO (MGI:MGI:6450443|PMID:30568254) BHF-UCL PMID:30568254 MGI:MGI:6450443 NCBI chrNW_004936566:3,924,013...3,951,052 JBrowse link
G Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ISO (MGI:MGI:5487756|PMID:22832517) UniProtKB PMID:22832517 MGI:MGI:5487756 NCBI chrNW_004936508:8,153,367...8,268,760 JBrowse link
G Shroom2 shroom family member 2 ISO (MGI:MGI:3723326|PMID:17666436) MGI PMID:17666436 MGI:MGI:3723326 NCBI chrNW_004936644:42,620...127,481 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like ISO (MGI:MGI:5433266|PMID:21703590) MGI PMID:21703590 MGI:MGI:5433266 NCBI chrNW_004936619:448,304...592,981 JBrowse link
G Swap70 switching B cell complex subunit SWAP70 ISO (MGI:MGI:5554982|PMID:23921380) CACAO PMID:23921380 MGI:MGI:5554982 NCBI chrNW_004936528:8,441,839...8,511,374 JBrowse link
negative regulation of actin filament polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 ISO RGD PMID:8675693 RGD:7174724 NCBI chrNW_004936477:20,695,109...20,766,053 JBrowse link
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 ISO (PMID:22084092) UniProtKB PMID:22084092 NCBI chrNW_004936496:6,807,388...6,914,960 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (MGI:MGI:5510934|PMID:23716571) MGI PMID:23716571 MGI:MGI:5510934 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Capn1 calpain 1 ISO RGD PMID:25653381 RGD:13792590 NCBI chrNW_004936599:4,178,963...4,201,037 JBrowse link
G Cyrib CYFIP related Rac1 interactor B ISO (PMID:30250061) UniProt PMID:30250061 NCBI chrNW_004936470:18,665,898...18,803,864 JBrowse link
G Fhod3 formin homology 2 domain containing 3 ISO (MGI:MGI:4422153|PMID:19706596) MGI PMID:19706596 MGI:MGI:4422153 NCBI chrNW_004936517:8,614,384...9,044,894 JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO (PMID:17318189)
(MGI:MGI:5805366|PMID:17318189)
ParkinsonsUK-UCL PMID:17318189 MGI:MGI:5805366 NCBI chrNW_004936558:1,778,862...1,804,071 JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 ISO (PMID:17996375), (PMID:18458160) MGI PMID:17996375, PMID:18458160 NCBI chrNW_004936503:4,125,302...4,255,880 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:MGI:5510934|PMID:23716571) MGI PMID:23716571 MGI:MGI:5510934 NCBI chrNW_004936485:9,089,118...9,114,396 JBrowse link
G Myadm myeloid associated differentiation marker ISO (PMID:23264465) UniProtKB PMID:23264465 NCBI chrNW_004936994:78,989...83,536 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:17662049 RGD:7240703 NCBI chrNW_004936541:4,873,459...4,919,787 JBrowse link
G Pfn1 profilin 1 ISO (PMID:7758455) UniProtKB PMID:7758455 NCBI chrNW_004936677:2,762,971...2,766,038 JBrowse link
G Pfn2 profilin 2 ISO (PMID:7758455)
(MGI:MGI:4844066|PMID:18001770)
UniProtKB
MGI
PMID:7758455, PMID:18001770 MGI:MGI:4844066 NCBI chrNW_004936727:1,992,508...1,993,271 JBrowse link
G Prkcd protein kinase C delta ISO (MGI:MGI:3813784|PMID:16940418) UniProtKB PMID:16940418 MGI:MGI:3813784 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:19759280) UniProtKB PMID:19759280 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:MGI:5307186|PMID:22198949) ARUK-UCL PMID:22198949 MGI:MGI:5307186 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Twf1 twinfilin actin binding protein 1 ISO (MGI:MGI:2673741|PMID:12807912) BHF-UCL PMID:12807912 MGI:MGI:2673741 NCBI chrNW_004936512:2,280,266...2,293,101 JBrowse link
negative regulation of actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpin actin related protein 2/3 complex inhibitor ISO (PMID:24132237) UniProtKB PMID:24132237 NCBI chrNW_004936483:15,664,972...15,682,795 JBrowse link
G Coro1a coronin 1A ISO (PMID:17442961) UniProtKB PMID:17442961 NCBI chrNW_004936501:12,338,542...12,344,236 JBrowse link
negative regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1b coronin 1B ISO (PMID:17350576), (PMID:18775315) UniProtKB PMID:17350576, PMID:18775315 NCBI chrNW_004936599:2,307,974...2,312,487 JBrowse link
G Ctnna2 catenin alpha 2 ISO (PMID:30013181) UniProt PMID:30013181 NCBI chrNW_004936556:5,205,481...6,271,304 JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 ISO (PMID:32128961) UniProt PMID:32128961 NCBI chrNW_004936608:575,520...644,145 JBrowse link
G Gmfg glia maturation factor gamma ISO (MGI:MGI:5505367|PMID:23727094) MGI PMID:23727094 MGI:MGI:5505367 NCBI chrNW_004936661:2,185,891...2,190,938 JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO (MGI:MGI:5805366|PMID:17318189) ParkinsonsUK-UCL PMID:17318189 MGI:MGI:5805366 NCBI chrNW_004936558:1,778,862...1,804,071 JBrowse link
G Pick1 protein interacting with PRKCA 1 ISO PMID:18297063 UniProt PMID:18297063 RGD:8554748 NCBI chrNW_004936492:3,098,196...3,115,921 JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) UniProtKB PMID:28223137 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
G Phf23 PHD finger protein 23 ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004936595:528,832...533,212 JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:21062745) UniProtKB PMID:21062745 NCBI chrNW_004936784:370,173...438,263 JBrowse link
G Tmem39a transmembrane protein 39A ISO (PMID:31806350) UniProt PMID:31806350 NCBI chrNW_004936536:6,376,539...6,406,314 JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:23459205) UniProtKB PMID:23459205 NCBI chrNW_004936580:5,299,864...5,316,583 JBrowse link
negative regulation of barbed-end actin filament capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil1 capping protein regulator and myosin 1 linker 1 ISO (MGI:MGI:3588909|PMID:16054028) UniProtKB PMID:16054028 MGI:MGI:3588909 NCBI chrNW_004936671:1,404,595...1,632,916 JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 ISO (PMID:26466680) UniProtKB PMID:26466680 NCBI chrNW_004936475:18,036,233...18,049,144 JBrowse link
G Cracd capping protein inhibiting regulator of actin dynamics ISO (PMID:30361697) UniProt PMID:30361697 NCBI chrNW_004936482:18,309,078...18,557,335 JBrowse link
negative regulation of beta-catenin-TCF complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled binding antagonist of beta catenin 1 ISO (PMID:18936100) ParkinsonsUK-UCL PMID:18936100 NCBI chrNW_004936495:3,017,029...3,026,759 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:3044231|PMID:15132997) UniProt PMID:15132997 MGI:MGI:3044231 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
negative regulation of death-inducing signaling complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nol3 nucleolar protein 3 ISO PMID:12191471
PMID:15383280
UniProt PMID:12191471, PMID:15383280 RGD:10047289, RGD:631884 NCBI chrNW_004936475:17,644,299...17,648,213 JBrowse link
negative regulation of DNA-templated transcription, termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Per2 period circadian regulator 2 ISO (MGI:MGI:5430667|PMID:22767893) UniProtKB PMID:22767893 MGI:MGI:5430667 NCBI chrNW_004936525:221,601...263,284 JBrowse link
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl13a ribosomal protein L13a ISO (PMID:17218275) UniProtKB PMID:17218275 NCBI chrNW_004936664:3,352,535...3,356,196 JBrowse link
negative regulation of integrin activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jam3 junctional adhesion molecule 3 ISO (PMID:19461049) ARUK-UCL PMID:19461049 NCBI chrNW_004936684:1,689,594...1,762,066 JBrowse link
G Kif14 kinesin family member 14 ISO (PMID:23209302) MGI PMID:23209302 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO (PMID:21681739) UniProtKB PMID:21681739 NCBI chrNW_004936518:1,903,636...1,916,746 JBrowse link
negative regulation of microtubule depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO (PMID:17192415)
(PMID:11166179)
(MGI:MGI:3656452|PMID:16525027)
MGI
UniProtKB
PMID:11166179, PMID:16525027, PMID:17192415 MGI:MGI:3656452 NCBI chrNW_004936531:6,899,580...7,019,016 JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO (PMID:11912491) UniProtKB PMID:11912491 NCBI chrNW_004936580:5,213,323...5,230,861 JBrowse link
G Atxn7 ataxin 7 ISO (PMID:22100762) CACAO PMID:22100762 NCBI chrNW_004936637:2,422,260...2,508,681 JBrowse link
G Bmerb1 bMERB domain containing 1 ISO (MGI:MGI:5578117|PMID:25099998) MGI PMID:25099998 MGI:MGI:5578117 NCBI chrNW_004936501:3,063,861...3,142,680 JBrowse link
G Cib1 calcium and integrin binding 1 ISO (PMID:21215777) UniProtKB PMID:21215777 NCBI chrNW_004936483:15,963,863...15,967,458 JBrowse link
G Ckap2 cytoskeleton associated protein 2 ISO (MGI:MGI:3589528|PMID:16061649) MGI PMID:16061649 MGI:MGI:3589528 NCBI chrNW_004936565:4,872,142...4,896,449 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 ISO (MGI:MGI:2176392|PMID:11290329)
(PMID:15631994)
(PMID:16866869)
MGI
UniProtKB
PMID:11290329, PMID:15631994, PMID:16866869 MGI:MGI:2176392 NCBI chrNW_004936469:49,067,357...49,335,212 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO (MGI:MGI:2176392|PMID:11290329)
(MGI:MGI:3693027|PMID:17113391)
MGI
RGD
PMID:11290329, PMID:17113391 MGI:MGI:2176392, MGI:MGI:3693027, RGD:68300 NCBI chrNW_004936473:23,756,291...23,940,966 JBrowse link
G Eml4 EMAP like 4 ISO (MGI:MGI:3709709|PMID:17196341) MGI PMID:17196341 MGI:MGI:3709709 NCBI chrNW_004936508:9,303,639...9,447,478 JBrowse link
G Fgf13 fibroblast growth factor 13 ISO (MGI:MGI:5431268|PMID:22726441) UniProtKB PMID:22726441 MGI:MGI:5431268 NCBI chrNW_004936513:8,419,588...8,911,010 JBrowse link
G Gas2l1 growth arrest specific 2 like 1 ISO (PMID:12584248) UniProtKB PMID:12584248 NCBI chrNW_004936657:3,327,363...3,333,087 JBrowse link
G Gas2l2 growth arrest specific 2 like 2 ISO (PMID:12584248) UniProtKB PMID:12584248 NCBI chrNW_004936490:144,824...153,790 JBrowse link
G Hdac6 histone deacetylase 6 ISO (MGI:MGI:2447264|PMID:12486003) MGI PMID:12486003 MGI:MGI:2447264 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Hdgfl3 HDGF like 3 ISO (MGI:MGI:3849122|PMID:19237540) UniProtKB PMID:19237540 MGI:MGI:3849122 NCBI chrNW_004936483:17,769,831...17,830,541 JBrowse link
G Katnb1 katanin regulatory subunit B1 ISO (PMID:10751153) UniProtKB PMID:10751153 NCBI chrNW_004936475:9,737,974...9,757,614 JBrowse link
G Map1a microtubule associated protein 1A ISO RGD PMID:11896150 RGD:71122 NCBI chrNW_004936471:6,685,565...6,706,860 JBrowse link
G Map1b microtubule associated protein 1B ISO RGD PMID:11896150 RGD:71122 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Map2 microtubule associated protein 2 ISO PMID:11029056 CAFA PMID:11029056 RGD:12793013 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Map6d1 MAP6 domain containing 1 ISO (MGI:MGI:3695226|PMID:16837464) MGI PMID:16837464 MGI:MGI:3695226 NCBI chrNW_004936578:5,995,629...6,003,148 JBrowse link
G Mid1 midline 1 ISO (MGI:MGI:3046496|PMID:15070402) MGI PMID:15070402 MGI:MGI:3046496 NCBI chrNW_004936470:414,420...576,717 JBrowse link
G Mid1ip1 MID1 interacting protein 1 ISO (MGI:MGI:3046496|PMID:15070402) MGI PMID:15070402 MGI:MGI:3046496 NCBI chrNW_004936502:5,634,319...5,638,869 JBrowse link
G Nav3 neuron navigator 3 ISO (PMID:25678558) UniProtKB PMID:25678558 NCBI chrNW_004936568:5,694,326...6,275,112 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like ISO (MGI:MGI:5433266|PMID:21703590) MGI PMID:21703590 MGI:MGI:5433266 NCBI chrNW_004936619:448,304...592,981 JBrowse link
G Spef1 sperm flagellar 1 ISO (MGI:MGI:5908342|PMID:16206169) UniProtKB PMID:16206169 MGI:MGI:5908342 NCBI chrNW_004936485:14,917,352...14,923,669 JBrowse link
G Stmn2 stathmin 2 ISO (PMID:18452648) UniProtKB PMID:18452648 NCBI chrNW_004936871:519,611...572,429 JBrowse link
G Taok1 TAO kinase 1 ISO (PMID:12639963) ARUK-UCL PMID:12639963 NCBI chrNW_004936538:5,531,639...5,668,119 JBrowse link
G Tpx2 TPX2 microtubule nucleation factor ISO (PMID:26414402) CACAO PMID:26414402 NCBI chrNW_004936485:18,718,801...18,773,315 JBrowse link
G Trim54 tripartite motif containing 54 ISO (MGI:MGI:1888564|PMID:10953002) MGI PMID:10953002 MGI:MGI:1888564 NCBI chrNW_004936493:5,261,127...5,279,040 JBrowse link
G Ttbk2 tau tubulin kinase 2 ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chrNW_004936471:6,003,294...6,108,677 JBrowse link
negative regulation of microtubule polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capzb capping actin protein of muscle Z-line subunit beta ISO (MGI:MGI:4397629|PMID:19806181) MGI PMID:19806181 MGI:MGI:4397629 NCBI chrNW_004936474:5,594,193...5,656,665 JBrowse link
G Cdh5 cadherin 5 ISO (PMID:23159740) ARUK-UCL PMID:23159740 NCBI chrNW_004936475:16,738,772...16,775,000 JBrowse link
G Clip3 CAP-Gly domain containing linker protein 3 ISO (PMID:15262990) UniProtKB PMID:15262990 NCBI chrNW_004936922:50,230...63,215 JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO (MGI:MGI:3768476|PMID:17906291) ARUK-UCL PMID:17906291 MGI:MGI:3768476 NCBI chrNW_004936500:5,317,109...5,423,593 JBrowse link
G Eml2 EMAP like 2 ISO (PMID:11694528) UniProtKB PMID:11694528 NCBI chrNW_004936706:2,018,951...2,044,695 JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 ISO RGD PMID:17435176 RGD:5508373 NCBI chrNW_004936606:3,122,798...3,131,352 JBrowse link
G Inpp5j inositol polyphosphate-5-phosphatase J ISO RGD PMID:16280363 RGD:2312436 NCBI chrNW_004936755:297,016...307,103 JBrowse link
G Map2 microtubule associated protein 2 ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Mapre1 microtubule associated protein RP/EB family member 1 ISO (PMID:11943150) UniProtKB PMID:11943150 NCBI chrNW_004936485:19,577,859...19,608,036 JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 ISO RGD PMID:16982696 RGD:1642763 NCBI chrNW_004936560:1,979,804...2,009,167 JBrowse link
G Snca synuclein alpha ISO (PMID:21127069) BHF-UCL PMID:21127069 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Stmn1 stathmin 1 ISO (MGI:MGI:3529385|PMID:15652749)
(PMID:25198505)
MGI
CAFA
PMID:15652749, PMID:25198505 MGI:MGI:3529385 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
G Stmn2 stathmin 2 ISO (PMID:18452648), (PMID:21215777) UniProtKB PMID:18452648, PMID:21215777 NCBI chrNW_004936871:519,611...572,429 JBrowse link
G Tbcd tubulin folding cofactor D ISO (PMID:10831612), (PMID:20740604) UniProtKB PMID:10831612, PMID:20740604 NCBI chrNW_004936923:239,029...366,503 JBrowse link
G Tubb4a tubulin beta 4A class IVa ISO (PMID:10211825) CAFA PMID:10211825 NCBI chrNW_004936588:3,821,171...3,826,827 JBrowse link
negative regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cptp ceramide-1-phosphate transfer protein ISO (PMID:29164996) UniProtKB PMID:29164996 NCBI chrNW_004936737:1,816,461...1,820,353 JBrowse link
G Mefv MEFV innate immuity regulator, pyrin ISO (PMID:26347139) UniProtKB PMID:26347139 NCBI chrNW_004936694:970,706...980,605 JBrowse link
G Nlrc3 NLR family CARD domain containing 3 ISO (PMID:25277106) UniProtKB PMID:25277106 NCBI chrNW_004936694:757,121...773,924 JBrowse link
G Pydc1 pyrin domain containing 1 NOT ISO (PMID:24871464) UniProtKB PMID:24871464 NCBI chrNW_004936501:13,561,927...13,564,392 JBrowse link
G Sirt2 sirtuin 2 ISO (MGI:MGI:5488534|PMID:23502856) MGI PMID:23502856 MGI:MGI:5488534 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO (PMID:16945374) BHF-UCL PMID:16945374 NCBI chrNW_004936542:2,098,683...2,101,127 JBrowse link
G Apom apolipoprotein M ISO (MGI:MGI:5427066|PMID:22204862)
(PMID:16682745), (PMID:22204862)
BHF-UCL PMID:16682745, PMID:22204862 MGI:MGI:5427066 NCBI chrNW_004936727:1,868,751...1,874,347 JBrowse link
G Pon1 paraoxonase 1 NOT ISO (PMID:15342686) BHF-UCL PMID:15342686 NCBI chrNW_004936585:4,954,871...4,979,560 JBrowse link
negative regulation of podosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO (MGI:MGI:5002438|PMID:21352810) MGI PMID:21352810 MGI:MGI:5002438 NCBI chrNW_004936580:5,213,323...5,230,861 JBrowse link
negative regulation of protein homooligomerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chrNW_004936475:50,476...77,797 JBrowse link
negative regulation of protein polymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vdac2 voltage dependent anion channel 2 ISO (MGI:MGI:5315363|PMID:12881569) UniProtKB PMID:12881569 MGI:MGI:5315363 NCBI chrNW_004936521:4,122,447...4,136,228 JBrowse link
negative regulation of protein-containing complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akain1 A-kinase anchor inhibitor 1 ISO (MGI:MGI:5755898|PMID:25653177) MGI PMID:25653177 MGI:MGI:5755898 NCBI chrNW_004936779:1,270,666...1,322,797 JBrowse link
G Cdc42 cell division cycle 42 ISO (PMID:11584266) UniProtKB PMID:11584266 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cldn7 claudin 7 ISO Epcam homooligomers RGD PMID:19276185 RGD:9685062 NCBI chrNW_004936595:550,359...552,214 JBrowse link
G Clu clusterin ISO (PMID:16113678)
(PMID:22179788), (PMID:23106396)
BHF-UCL