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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular protein catabolic process
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Accession:GO:0044257 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms:exact_synonym: cellular protein breakdown;   cellular protein catabolism;   cellular protein degradation


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cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:1624291
RGD:1600115
G Cln8 CLN8, transmembrane ER and ERGIC protein JBrowse link 16 79,828,321 79,838,212 RGD:1624291
RGD:1600115
G Dab2ip DAB2 interacting protein JBrowse link 3 14,889,263 15,060,286 RGD:1600115
RGD:1624291
G Dennd3 DENN domain containing 3 JBrowse link 7 114,724,644 114,812,471 RGD:1624291
RGD:1600115
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:1624291
RGD:1600115
G Ide insulin degrading enzyme JBrowse link 1 255,914,465 256,014,168 RGD:1627575
RGD:1624291
G Magec2 MAGE family member C2 JBrowse link X 145,353,959 145,362,427 RGD:1624291
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 5 140,538,260 140,558,163 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Rab12 RAB12, member RAS oncogene family JBrowse link 9 114,683,985 114,709,613 RGD:1624291
RGD:1600115
G Ripk1 receptor interacting serine/threonine kinase 1 JBrowse link 17 31,537,580 31,569,904 RGD:1624291
RGD:1600115
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1624291
G Siah2 siah E3 ubiquitin protein ligase 2 JBrowse link 2 148,874,151 148,891,900 RGD:1624291
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 JBrowse link 10 59,173,268 59,254,458 RGD:1624291
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 20 11,700,089 11,721,823 RGD:1624291
G Ube4b ubiquitination factor E4B JBrowse link 5 166,156,033 166,259,069 RGD:1624291
acrosome matrix dispersal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acr acrosin JBrowse link 7 130,541,320 130,548,356 RGD:13464336
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anapc1 anaphase promoting complex subunit 1 JBrowse link 3 121,147,484 121,226,125 RGD:13792537
G Anapc10 anaphase promoting complex subunit 10 JBrowse link 19 31,814,686 31,867,928 RGD:1600115
G Anapc4 anaphase promoting complex subunit 4 JBrowse link 14 60,471,962 60,503,803 RGD:13792537
G Anapc5 anaphase-promoting complex subunit 5 JBrowse link 12 39,209,134 39,242,696 RGD:13792537
G Anapc7 anaphase promoting complex subunit 7 JBrowse link 12 39,613,898 39,641,999 RGD:13792537
G Cdc16 cell division cycle 16 JBrowse link 16 81,493,355 81,516,493 RGD:13792537
G Cdc20 cell division cycle 20 JBrowse link 5 137,260,728 137,264,931 RGD:1624291
RGD:1600115
G Cdc23 cell division cycle 23 JBrowse link 18 27,430,924 27,452,569 RGD:13792537
G Cdc26 cell division cycle 26 JBrowse link 5 78,252,168 78,267,137 RGD:1600115
G Cdc27 cell division cycle 27 JBrowse link 10 92,551,754 92,602,214 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1600115
RGD:1624291
G Ecrg4 ECRG4 augurin precursor JBrowse link 9 50,526,811 50,548,056 RGD:1624291
RGD:13792537
G Fbxo31 F-box protein 31 JBrowse link 19 53,487,610 53,625,673 RGD:1624291
RGD:1600115
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 7 11,201,690 11,213,614 RGD:1624291
RGD:1600115
G Ube2c ubiquitin-conjugating enzyme E2C JBrowse link 3 161,236,971 161,239,371 RGD:1624291
RGD:13792537
G Ube2s ubiquitin-conjugating enzyme E2S JBrowse link 1 72,580,424 72,584,484 RGD:1600115
RGD:1624291
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf126 ring finger protein 126 JBrowse link 7 12,820,796 12,828,325 RGD:1624291
RGD:1600115
epidermal growth factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
G Snx5 sorting nexin 5 JBrowse link 3 138,378,032 138,397,944 RGD:13508623
ER-associated misfolded protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:1600115
G Pomt2 protein-O-mannosyltransferase 2 JBrowse link 6 111,137,329 111,176,991 RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:13792537
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1624291
RGD:13792537
G Sdf2l1 stromal cell-derived factor 2-like 1 JBrowse link 11 88,122,271 88,124,513 RGD:8554667
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1624291
RGD:13792537
RGD:1600115
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 JBrowse link 9 42,692,156 42,805,680 RGD:13792537
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:13792537
ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brsk2 BR serine/threonine kinase 2 JBrowse link 1 214,918,757 214,940,883 RGD:1624291
RGD:1600115
G Ccdc47 coiled-coil domain containing 47 JBrowse link 10 94,388,425 94,406,949 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 20 29,445,510 29,463,739 RGD:1624291
G Rcn3 reticulocalbin 3 JBrowse link 1 101,076,971 101,086,198 RGD:1600115
RGD:1624291
G Rhbdd1 rhomboid domain containing 1 JBrowse link 9 88,110,731 88,229,462 RGD:1624291
RGD:1600115
G Rnf139 ring finger protein 139 JBrowse link 7 98,770,840 98,782,025 RGD:1624291
RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1624291
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1624291
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:1624291
RGD:1600115
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
G Ubxn6 UBX domain protein 6 JBrowse link 9 10,995,516 11,000,643 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1600115
RGD:1624291
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1600115
RGD:1624291
RGD:629554
lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc115 coiled-coil domain containing 115 JBrowse link 9 37,774,876 37,778,839 RGD:1624291
RGD:1600115
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1624291
RGD:1600115
G Psap prosaposin JBrowse link 20 29,831,302 29,856,876 RGD:1600115
G Tmem199 transmembrane protein 199 JBrowse link 10 65,775,721 65,780,293 RGD:1624291
RGD:1600115
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Get4 guided entry of tail-anchored proteins factor 4 JBrowse link 12 17,469,112 17,486,709 RGD:1624291
RGD:1600115
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
RGD:1600115
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
RGD:1600115
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
RGD:1600115
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link 13 69,135,095 69,197,708 RGD:1624291
RGD:1600115
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
RGD:1600115
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hm13 histocompatibility minor 13 JBrowse link 3 148,150,695 148,189,623 RGD:1624291
RGD:1600115
G Rhbdd1 rhomboid domain containing 1 JBrowse link 9 88,110,731 88,229,462 RGD:1624291
RGD:1600115
mitochondria-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
mitochondrial protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afg1l AFG1 like ATPase JBrowse link 20 47,038,824 47,208,812 RGD:1624291
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:1624291
RGD:1600115
G Bnip3l BCL2 interacting protein 3 like JBrowse link 15 43,643,897 43,667,123 RGD:1624291
RGD:1600115
G Proca1 protein interacting with cyclin A1 JBrowse link 10 65,454,451 65,469,491 RGD:1600115
G Spata18 spermatogenesis associated 18 JBrowse link 14 37,081,529 37,108,245 RGD:1600115
RGD:13792537
RGD:1624291
G Yme1l1 YME1-like 1 ATPase JBrowse link 17 89,701,899 89,741,919 RGD:1624291
modification-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07043601.3 RGD:13792537
G Chfr checkpoint with forkhead and ring finger domains JBrowse link 12 52,562,594 52,596,162 RGD:1624291
RGD:1600115
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 5 173,624,862 173,629,124 RGD:1624291
RGD:13792537
G Nedd8 NEDD8 ubiquitin like modifier JBrowse link 15 34,340,607 34,352,673 RGD:13792537
G Rps27a ribosomal protein S27a JBrowse link 14 113,966,163 113,968,440 RGD:13792537
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 JBrowse link 16 20,668,925 20,671,127 RGD:13792537
G Uba7 ubiquitin-like modifier activating enzyme 7 JBrowse link 8 116,754,178 116,766,765 RGD:1624291
RGD:1600115
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:13792537
G Ubc ubiquitin C JBrowse link 12 36,638,457 36,642,734 RGD:13792537
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 JBrowse link 3 72,191,533 72,206,190 RGD:1624291
negative regulation of cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atraid all-trans retinoic acid-induced differentiation factor JBrowse link 6 26,680,628 26,685,185 RGD:1624291
RGD:1600115
G Cdk2 cyclin dependent kinase 2 JBrowse link 7 3,124,953 3,132,533 RGD:1624291
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 JBrowse link 10 84,780,644 84,789,800 RGD:1600115
RGD:1624291
G Dab2ip DAB2 interacting protein JBrowse link 3 14,889,263 15,060,286 RGD:1600115
RGD:1624291
G F13b coagulation factor XIII B chain JBrowse link 13 56,598,891 56,623,132 RGD:1624291
RGD:1600115
G Nell1 neural EGFL like 1 JBrowse link 1 105,348,577 106,218,970 RGD:1624291
RGD:1600115
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 JBrowse link 5 59,080,290 59,088,777 RGD:1624291
RGD:1600115
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 JBrowse link 1 247,688,778 247,784,219 RGD:1624291
RGD:1600115
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:1600115
G Svip small VCP interacting protein JBrowse link 1 107,368,117 107,373,807 RGD:10047192
RGD:1624291
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 1,178,785 1,216,573 RGD:1624291
RGD:1600115
negative regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp11 aquaporin 11 JBrowse link 1 162,703,394 162,713,560 RGD:1600115
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
RGD:1600115
G Usp25 ubiquitin specific peptidase 25 JBrowse link 11 15,436,080 15,558,646 RGD:1624291
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
RGD:13792537
G Anxa9 annexin A9 JBrowse link 2 196,470,318 196,481,568 RGD:13792537
G Furin furin (paired basic amino acid cleaving enzyme) JBrowse link 1 142,185,092 142,198,167 RGD:1624291
RGD:1600115
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Laptm4b lysosomal protein transmembrane 4 beta JBrowse link 7 72,924,911 72,968,099 RGD:1624291
RGD:1600115
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase JBrowse link 7 121,394,541 121,436,935 RGD:1624291
RGD:1600115
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
RGD:1600115
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alad aminolevulinate dehydratase JBrowse link 5 78,368,867 78,379,206 RGD:1624291
RGD:1600115
G F8a1 coagulation factor VIII-associated 1 JBrowse link 1 147,021,436 147,022,950 RGD:1624291
RGD:1600115
G Gabarapl2 GABA type A receptor associated protein like 2 JBrowse link 19 44,164,935 44,175,771 RGD:1624291
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:13514081
RGD:1624291
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
G Marchf7 membrane associated ring-CH-type finger 7 JBrowse link 3 46,284,961 46,325,230 RGD:1624291
RGD:1600115
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:13792537
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:1624291
RGD:1600115
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 JBrowse link 19 10,827,057 10,856,747 RGD:1600115
RGD:1624291
G Psmf1 proteasome inhibitor subunit 1 JBrowse link 3 147,238,111 147,263,275 RGD:1600115
RGD:1624291
G Sco1 synthesis of cytochrome C oxidase 1 JBrowse link 10 53,595,854 53,608,437 RGD:1624291
RGD:1600115
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1624291
RGD:1600115
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag5 BAG cochaperone 5 JBrowse link 6 136,180,640 136,185,651 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Camlg calcium modulating ligand JBrowse link 17 9,523,792 9,534,683 RGD:1600115
RGD:1624291
G Ccar2 cell cycle and apoptosis regulator 2 JBrowse link 15 51,818,887 51,834,443 RGD:1624291
RGD:1600115
G Clec16a C-type lectin domain containing 16A JBrowse link 10 5,002,196 5,196,914 RGD:1624291
RGD:1600115
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1600115
RGD:1624291
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:1624291
RGD:1600115
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
RGD:1600115
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:1600115
RGD:1624291
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
RGD:13792537
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:1624291
G Mtm1 myotubularin 1 JBrowse link 6 18,821,821 18,840,449 RGD:1624291
G N4bp1 Nedd4 binding protein 1 JBrowse link 19 21,218,123 21,268,539 RGD:1624291
RGD:1600115
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
RGD:1600115
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1600115
RGD:1624291
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Pbk PDZ binding kinase JBrowse link 15 42,489,253 42,500,377 RGD:1624291
RGD:1600115
G Rpl11 ribosomal protein L11 JBrowse link 5 154,390,809 154,394,412 RGD:1624291
RGD:1600115
G Rybp RING1 and YY1 binding protein JBrowse link 4 132,689,623 132,740,823 RGD:1624291
RGD:1600115
G Sdcbp syndecan binding protein JBrowse link 5 19,471,664 19,498,499 RGD:1624291
RGD:1600115
G Senp1 SUMO specific peptidase 1 JBrowse link 7 139,626,444 139,684,587 RGD:1624291
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:1624291
RGD:1600115
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 8 118,206,678 118,326,264 RGD:1624291
RGD:1600115
G Taf9 TATA-box binding protein associated factor 9 JBrowse link 2 30,664,407 30,668,414 RGD:1624291
G Tlk2 tousled-like kinase 2 JBrowse link 10 93,410,181 93,507,277 RGD:1624291
RGD:1600115
G Trim39 tripartite motif-containing 39 JBrowse link 20 2,500,691 2,514,546 RGD:1600115
RGD:1624291
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
RGD:1600115
G Uchl5 ubiquitin C-terminal hydrolase L5 JBrowse link 13 60,568,102 60,603,812 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
RGD:1624291
G Wac WW domain containing adaptor with coiled-coil JBrowse link 17 60,887,606 60,946,630 RGD:1624291
RGD:1600115
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1624291
G Efna1 ephrin A1 JBrowse link 2 188,588,808 188,596,156 RGD:1624291
RGD:1600115
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:1624291
RGD:1600115
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:1600115
G Derl3 derlin 3 JBrowse link 20 13,692,102 13,707,645 RGD:1624291
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:1624291
RGD:1600115
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:1624291
RGD:1600115
G Svip small VCP interacting protein JBrowse link 1 107,368,117 107,373,807 RGD:1624291
RGD:1600115
G Ubac2 UBA domain containing 2 JBrowse link 15 108,286,407 108,433,531 RGD:1624291
RGD:1600115
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 20 11,700,089 11,721,823 RGD:1624291
RGD:1600115
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 JBrowse link 5 48,274,387 48,292,699 RGD:1624291
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1600115
RGD:1624291
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Styx serine/threonine/tyrosine interacting protein JBrowse link 15 19,690,079 19,720,683 RGD:1624291
RGD:13792537
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A JBrowse link 20 7,484,550 7,636,498 RGD:1624291
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1624291
G Csnk2a1 casein kinase 2 alpha 1 JBrowse link 3 147,713,808 147,760,375 RGD:1624291
G Csnk2a2 casein kinase 2 alpha 2 JBrowse link 19 9,972,537 10,012,043 RGD:1600115
RGD:1624291
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:1624291
RGD:1600115
G Hipk2 homeodomain interacting protein kinase 2 JBrowse link 4 66,438,390 66,625,183 RGD:1600115
RGD:1624291
G Pdcl3 phosducin-like 3 JBrowse link 9 45,672,257 45,680,728 RGD:1624291
RGD:1600115
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:1624291
RGD:1600115
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:1624291
G Qrich2 glutamine rich 2 JBrowse link 10 105,397,470 105,422,811 RGD:1624291
RGD:1600115
G Rpl11 ribosomal protein L11 JBrowse link 5 154,390,809 154,394,412 RGD:1624291
G Rpl23 ribosomal protein L23 JBrowse link 10 85,721,398 85,725,359 RGD:1624291
RGD:1600115
G Rpl5 ribosomal protein L5 JBrowse link 14 2,860,963 2,867,397 RGD:1624291
G Rps7 ribosomal protein S7 JBrowse link 6 47,899,525 47,904,389 RGD:1624291
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:1600115
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:1624291
RGD:1600115
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Trim39 tripartite motif-containing 39 JBrowse link 20 2,500,691 2,514,546 RGD:1624291
RGD:1600115
G Wnt1 Wnt family member 1 JBrowse link 7 140,464,999 140,469,046 RGD:1624291
RGD:1600115
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1600115
RGD:1624291
G Klhl15 kelch-like family member 15 JBrowse link X 63,342,277 63,390,915 RGD:1624291
RGD:1600115
oxidation-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lonp1 lon peptidase 1, mitochondrial JBrowse link 9 10,428,853 10,441,180 RGD:1624291
RGD:1600115
positive regulation of cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amer1 APC membrane recruitment protein 1 JBrowse link X 64,686,620 64,702,504 RGD:1624291
RGD:1600115
G Dact1 dishevelled-binding antagonist of beta-catenin 1 JBrowse link 6 93,740,440 93,751,003 RGD:1624291
RGD:1600115
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Faf1 Fas associated factor 1 JBrowse link 5 129,370,767 129,738,393 RGD:1600115
RGD:1624291
G Fbxl5 F-box and leucine-rich repeat protein 5 JBrowse link 14 71,852,649 71,891,143 RGD:1624291
RGD:1600115
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:1624291
G Msn moesin JBrowse link X 65,226,834 65,294,192 RGD:1600115
RGD:1624291
G Pttg1ip PTTG1 interacting protein JBrowse link 20 11,746,369 11,764,097 RGD:1624291
RGD:1600115
G Rdx radixin JBrowse link 8 56,570,728 56,612,851 RGD:1624291
RGD:1600115
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291
RGD:1600115
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1624291
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
RGD:1600115
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B-cell receptor-associated protein 31 JBrowse link X 157,094,365 157,126,397 RGD:1624291
RGD:1600115
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1600115
RGD:1624291
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:10047316
RGD:1624291
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:1600115
G Ubqln1 ubiquilin 1 JBrowse link 17 6,840,441 6,878,842 RGD:1600115
RGD:1624291
G Ubqln2 ubiquilin 2 JBrowse link X 18,723,313 18,726,732 RGD:1624291
RGD:1600115
positive regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1600115
RGD:1624291
G Rnft1 ring finger protein, transmembrane 1 JBrowse link 10 73,807,455 73,821,178 RGD:1600115
RGD:1624291
G Tmem259 transmembrane protein 259 JBrowse link 7 12,771,239 12,777,901 RGD:1624291
RGD:13792537
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:8554391
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
RGD:1600115
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
RGD:1600115
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1624291
RGD:1600115
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1600115
RGD:1624291
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:1624291
RGD:1600115
G Lrp2 LDL receptor related protein 2 JBrowse link 3 55,665,153 55,822,484 RGD:1624291
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag2 BAG cochaperone 2 JBrowse link 9 38,456,487 38,467,120 RGD:1624291
RGD:1600115
G Dab2ip DAB2 interacting protein JBrowse link 3 14,889,263 15,060,286 RGD:1600115
RGD:1624291
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1624291
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator JBrowse link 18 28,507,167 28,516,567 RGD:1624291
RGD:13792537
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:1600115
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1624291
RGD:1600115
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 JBrowse link 11 32,434,786 32,447,264 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1624291
RGD:1600115
G Osbpl7 oxysterol binding protein-like 7 JBrowse link 10 84,986,330 85,003,947 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Psmc1 proteasome 26S subunit, ATPase 1 JBrowse link 6 124,123,283 124,135,644 RGD:1600115
G Psmc2 proteasome 26S subunit, ATPase 2 JBrowse link 4 9,867,132 9,881,383 RGD:1600115
G Psmc4 proteasome 26S subunit, ATPase 4 JBrowse link 1 84,978,220 84,986,536 RGD:1600115
G Rnf40 ring finger protein 40 JBrowse link 1 199,037,472 199,052,823 RGD:633892
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 JBrowse link 7 40,171,957 40,217,056 RGD:1624291
RGD:1600115
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:1624291
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC135026.1 RGD:13792537
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
RGD:1600115
G Ankib1 ankyrin repeat and IBR domain containing 1 JBrowse link 4 27,473,477 27,597,206 RGD:13792537
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 8 64,166,359 64,268,555 RGD:13792537
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 8 117,387,004 117,446,085 RGD:13792537
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
RGD:1600115
G Axin1 axin 1 RGD:1624291
G Bag2 BAG cochaperone 2 JBrowse link 9 38,456,487 38,467,120 RGD:1624291
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link 2 123,283,402 123,322,991 RGD:1624291
RGD:1600115
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 19 55,438,409 55,510,652 RGD:1624291
RGD:1600115
G Chfr checkpoint with forkhead and ring finger domains JBrowse link 12 52,562,594 52,596,162 RGD:1624291
RGD:1600115
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:1600115
RGD:13792537
RGD:1624291
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 13 76,942,883 77,076,015 RGD:1624291
RGD:1600115
G Csnk1a1 casein kinase 1, alpha 1 JBrowse link 18 56,887,722 56,910,610 RGD:1624291
RGD:1600115
G Csnk1d casein kinase 1, delta JBrowse link 10 110,147,786 110,182,413 RGD:1624291
RGD:13792537
RGD:1600115
G Csnk1e casein kinase 1, epsilon JBrowse link 7 120,651,976 120,675,559 RGD:1624291
RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
RGD:1600115
G Dda1 DET1 and DDB1 associated 1 JBrowse link 16 19,877,873 19,885,501 RGD:13792537
G Ddrgk1 DDRGK domain containing 1 JBrowse link 3 123,195,580 123,206,828 RGD:1624291
RGD:1600115
G Det1 DET1 partner of COP1 E3 ubiquitin ligase JBrowse link 1 140,519,755 140,535,969 RGD:1624291
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
RGD:13792537
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1624291
RGD:1600115
G Fam122a family with sequence similarity 122A JBrowse link 1 242,372,458 242,373,764 RGD:1600115
RGD:1624291
G Fbxo22 F-box protein 22 JBrowse link 8 59,770,032 59,786,061 RGD:1624291
RGD:1600115
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
RGD:1600115
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1624291
RGD:1600115
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
RGD:13792537
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
RGD:13792537
RGD:1600115
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:1624291
RGD:13792537
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1624291
RGD:13792537
G Hspbp1 HSPA (Hsp70) binding protein 1 JBrowse link 1 72,732,418 72,756,087 RGD:1624291
RGD:1600115
G Il33 interleukin 33 JBrowse link 1 248,112,611 248,147,030 RGD:1624291
RGD:1600115
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
G LOC108348108 heat shock 70 kDa protein 1A JBrowse link 20 2,699,707 2,701,856 RGD:13792537
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:1600115
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:1624291
RGD:1600115
G Nkd2 NKD inhibitor of WNT signaling pathway 2 JBrowse link 1 32,054,390 32,085,416 RGD:1624291
RGD:1600115
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
RGD:1600115
G Nub1 negative regulator of ubiquitin-like proteins 1 JBrowse link 4 6,950,870 6,981,400 RGD:1624291
G Pias1 protein inhibitor of activated STAT, 1 JBrowse link 8 67,771,720 67,869,015 RGD:1624291
RGD:1600115
G Plk1 polo-like kinase 1 JBrowse link 1 192,115,990 192,125,969 RGD:1600115
RGD:1624291
G Plk2 polo-like kinase 2 JBrowse link 2 41,911,143 41,916,901 RGD:7241135
G Prickle1 prickle planar cell polarity protein 1 JBrowse link 7 134,702,964 134,799,437 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
RGD:13792537
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:1624291
G Psmd10 proteasome 26S subunit, non-ATPase 10 JBrowse link X 112,323,188 112,328,642 RGD:1624291
RGD:1600115
G Rack1 receptor for activated C kinase 1 JBrowse link 10 34,149,717 34,155,198 RGD:1624291
RGD:1600115
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:1624291
RGD:1600115
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
RGD:1600115
G Rchy1 ring finger and CHY zinc finger domain containing 1 JBrowse link 14 17,615,968 17,631,715 RGD:1624291
G Rnf14 ring finger protein 14 JBrowse link 18 31,443,424 31,468,641 RGD:13792537
G Rnf144a ring finger protein 144A JBrowse link 6 45,509,895 45,629,233 RGD:13792537
G Rnf144b ring finger protein 144B JBrowse link 17 17,817,122 17,947,777 RGD:13792537
G Rnf180 ring finger protein 180 JBrowse link 2 35,718,100 35,892,578 RGD:1624291
RGD:1600115
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase JBrowse link 7 75,058,758 75,098,331 RGD:13792537
G Rnf19b ring finger protein 19B JBrowse link 5 147,246,032 147,270,892 RGD:13792537
G Rnf217 ring finger protein 217 JBrowse link 1 28,301,960 28,391,582 RGD:13792537
G Sh3rf2 SH3 domain containing ring finger 2 JBrowse link 18 36,371,041 36,471,020 RGD:13673844
RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1624291
RGD:1600115
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:1624291
RGD:1600115
G Socs5 suppressor of cytokine signaling 5 JBrowse link 6 10,671,311 10,705,610 RGD:1624291
RGD:1600115
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1624291
RGD:1600115
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 9 66,453,428 66,483,614 RGD:1624291
RGD:1600115
G Sumo2 small ubiquitin-like modifier 2 JBrowse link 10 104,085,401 104,097,983 RGD:1624291
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Trib1 tribbles pseudokinase 1 JBrowse link 7 99,954,492 99,961,026 RGD:1624291
RGD:13792537
G Trib2 tribbles pseudokinase 2 JBrowse link 6 41,016,722 41,040,972 RGD:1624291
RGD:13792537
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:13792537
G Ube2v2 ubiquitin conjugating enzyme E2 V2 JBrowse link 11 89,557,273 89,591,175 RGD:1299567
G Usp5 ubiquitin specific peptidase 5 JBrowse link 4 157,332,735 157,347,803 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1599730
RGD:1624291
G Zer1 zyg-11 related, cell cycle regulator JBrowse link 3 8,662,579 8,690,486 RGD:1624291
RGD:1600115
G Zfand2a zinc finger AN1-type containing 2A JBrowse link 12 17,252,093 17,263,477 RGD:1624291
RGD:1600115
G Zyg11b zyg-11 family member B, cell cycle regulator JBrowse link 5 127,844,062 127,878,792 RGD:1624291
RGD:1600115
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk3 polo-like kinase 3 JBrowse link 5 135,997,725 136,002,900 RGD:1624291
RGD:1600115
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1624291
RGD:1600115
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5if1 ATP synthase inhibitory factor subunit 1 JBrowse link 5 150,719,570 150,723,287 RGD:1624291
RGD:1600115
G Ctsc cathepsin C JBrowse link 1 151,918,514 151,949,979 RGD:8661625
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:9590188
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcap31 B-cell receptor-associated protein 31 JBrowse link X 157,094,365 157,126,397 RGD:1624291
RGD:1600115
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
RGD:1600115
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
RGD:1600115
positive regulation of transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxw8 F-box and WD repeat domain containing 8 JBrowse link 12 44,046,204 44,138,138 RGD:1600115
RGD:1624291
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:1624291
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 10 35,333,859 35,374,364 RGD:1600115
RGD:1624291
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:1600115
RGD:1624291
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axin1 axin 1 RGD:8553327
RGD:1624291
G Ccdc22 coiled-coil domain containing 22 JBrowse link X 15,742,978 15,754,925 RGD:1624291
RGD:13792537
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 JBrowse link 10 84,780,644 84,789,800 RGD:1624291
RGD:1600115
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:1624291
RGD:13792537
RGD:1600115
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:1624291
RGD:1600115
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:1624291
G Fbxo22 F-box protein 22 JBrowse link 8 59,770,032 59,786,061 RGD:1624291
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1600115
RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1600115
RGD:1624291
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115
G Rnf139 ring finger protein 139 JBrowse link 7 98,770,840 98,782,025 RGD:1624291
RGD:1600115
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 12 11,433,815 11,526,465 RGD:1624291
RGD:1600115
G Sumo3 small ubiquitin-like modifier 3 JBrowse link 20 11,726,488 11,737,050 RGD:1624291
G Trim67 tripartite motif-containing 67 JBrowse link 19 57,554,665 57,593,401 RGD:1624291
RGD:1600115
prenylated protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcyox1 prenylcysteine oxidase 1 JBrowse link 4 118,187,133 118,198,029 RGD:1624291
RGD:13792537
G Pcyox1l prenylcysteine oxidase 1 like JBrowse link 18 57,021,081 57,031,552 RGD:13792537
G Zmpste24 zinc metallopeptidase STE24 JBrowse link 5 139,982,404 140,015,541 RGD:1624291
RGD:1600115
proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07045621.1 RGD:13792537
G Ate1 arginyltransferase 1 JBrowse link 1
1
200,810,741
200,958,564
200,885,593
201,082,100
RGD:1624291
RGD:1600115
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1624291
G Ddi1 DNA-damage inducible 1 homolog 1 JBrowse link 8 4,547,725 4,549,573 RGD:1600115
RGD:1624291
G Ddi2 DNA damage inducible 1 homolog 2 JBrowse link 5 160,230,958 160,282,836 RGD:1624291
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:1624291
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 JBrowse link 18 62,159,128 62,179,635 RGD:1624291
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
RGD:1600115
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:13792537
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Rnf41 ring finger protein 41 JBrowse link 7 2,827,242 2,854,230 RGD:1624291
RGD:1600115
G Socs6 suppressor of cytokine signaling 6 JBrowse link 18 85,962,729 85,981,125 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:1600115
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
RGD:1600115
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07045621.1 RGD:13792537
G Enc1 ectodermal-neural cortex 1 JBrowse link 2 28,049,217 28,061,023 RGD:1624291
RGD:13792537
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
RGD:1600115
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:13792537
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Psme4 proteasome activator subunit 4 JBrowse link 14 115,166,165 115,269,041 RGD:1624291
RGD:13792537
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07012426.1 RGD:13792537
G AABR07041109.1 RGD:13792537
G AABR07045621.1 RGD:13792537
G AABR07053749.1 RGD:1600115
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 JBrowse link 4 7,202,330 7,253,386 RGD:1624291
RGD:13792537
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 JBrowse link 12 22,665,128 22,676,079 RGD:1600115
RGD:13792537
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 JBrowse link 6 108,630,790 108,796,096 RGD:13792537
G Armc8 armadillo repeat containing 8 JBrowse link 8 107,723,359 107,819,208 RGD:13792537
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Arrb1 arrestin, beta 1 JBrowse link 1 164,502,099 164,573,947 RGD:1624291
RGD:1600115
G Arrb2 arrestin, beta 2 JBrowse link 10 57,040,252 57,048,045 RGD:1624291
RGD:1600115
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
G Bfar bifunctional apoptosis regulator JBrowse link 10
10
1,464,658
1,464,783
1,471,152
1,497,653
RGD:1624291
RGD:13792537
G Birc2 baculoviral IAP repeat-containing 2 JBrowse link 8 6,014,014 6,036,668 RGD:1624291
RGD:1600115
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
G Cd2ap CD2-associated protein JBrowse link 9 20,794,680 20,858,438 RGD:1302417
G Cdc34 cell division cycle 34 JBrowse link 7 12,899,957 12,905,339 RGD:1624291
RGD:1600115
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1600115
RGD:1624291
G Cop1 COP1, E3 ubiquitin ligase JBrowse link 13 76,942,883 77,076,015 RGD:1624291
RGD:1600115
G Crbn cereblon JBrowse link 4 138,864,910 138,885,786 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Cul1 cullin 1 JBrowse link 4 77,211,814 77,283,369 RGD:13792537
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1624291
RGD:1600115
G Cul4a cullin 4A JBrowse link 16 81,718,784 81,756,653 RGD:1624291
RGD:13792537
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:13792537
G Cul5 cullin 5 JBrowse link 8 58,199,992 58,255,149 RGD:13792537
G Dcaf11 DDB1 and CUL4 associated factor 11 JBrowse link 15 34,233,840 34,244,512 RGD:13792537
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1600115
RGD:13792537
RGD:1624291
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:1600115
RGD:1624291
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link 13 69,135,095 69,197,708 RGD:1624291
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
RGD:1600115
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 2 39,434,617 39,473,392 RGD:1624291
RGD:13792537
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1624291
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 9 110,515,558 110,936,631 RGD:1624291
G Fbxl19 F-box and leucine-rich repeat protein 19 JBrowse link 1 199,196,126 199,217,147 RGD:1624291
RGD:1600115
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 8 72,198,043 72,204,730 RGD:1624291
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 15 93,647,307 93,667,395 RGD:1624291
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1624291
RGD:13792537
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:1624291
RGD:13792537
G Fbxw5 F-box and WD repeat domain containing 5 JBrowse link 3 2,726,705 2,731,213 RGD:1624291
RGD:1600115
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:13792537
G Gid4 GID complex subunit 4 JBrowse link 10 46,784,124 46,810,517 RGD:13792537
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
RGD:1600115
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 JBrowse link 20 50,652,489 50,783,937 RGD:13792537
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 JBrowse link 5 135,860,578 135,870,535 RGD:1624291
RGD:1600115
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 17 53,229,997 53,777,474 RGD:13792537
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 9 60,451,476 60,843,160 RGD:13792537
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 1 114,453,033 114,653,787 RGD:1624291
RGD:1600115
G Ifi27 interferon, alpha-inducible protein 27 JBrowse link 6 127,327,959 127,334,430 RGD:1624291
G Itch itchy E3 ubiquitin protein ligase JBrowse link 3 150,660,665 150,752,016 RGD:13792537
G Kat5 lysine acetyltransferase 5 JBrowse link 1 220,967,795 220,974,596 RGD:1600115
RGD:1624291
G Kat7 lysine acetyltransferase 7 JBrowse link 10 83,095,067 83,128,342 RGD:1600115
G Kctd10 potassium channel tetramerization domain containing 10 JBrowse link 12 47,992,079 48,010,531 RGD:1600115
RGD:13792537
G Kctd13 potassium channel tetramerization domain containing 13 JBrowse link 1 198,360,627 198,378,935 RGD:1624291
RGD:1600115
G Kctd17 potassium channel tetramerization domain containing 17 JBrowse link 7 119,647,301 119,658,148 RGD:1624291
RGD:13792537
G Kctd2 potassium channel tetramerization domain containing 2 JBrowse link 10 103,972,700 103,984,398 RGD:13792537
G Kctd5 potassium channel tetramerization domain containing 5 JBrowse link 10 13,420,152 13,446,323 RGD:13792537
G Kif14 kinesin family member 14 JBrowse link 13 53,350,073 53,421,992 RGD:1624291
G Klhl20 kelch-like family member 20 JBrowse link 13 78,912,361 78,957,226 RGD:1624291
RGD:13792537
RGD:1600115
G Klhl22 kelch-like family member 22 JBrowse link 11 87,646,489 87,718,808 RGD:1600115
RGD:1624291
G Klhl42 kelch-like family, member 42 JBrowse link 4 181,481,147 181,502,916 RGD:1624291
RGD:1600115
G LOC100360846 proteasome subunit beta type 6-like JBrowse link 2 96,031,967 96,033,538 RGD:13792537
G LOC100911548 SPRY domain-containing SOCS box protein 2-like JBrowse link 9 20,217,278 20,219,677 RGD:13792537
G LOC100911679 TD and POZ domain-containing protein 2-like JBrowse link 2 194,084,048 194,085,124 RGD:13792537
G LOC103689927 protein RMD5 homolog B JBrowse link 10 37,073,588 37,084,671 RGD:13792537
G LOC103694506 ubiquitin-conjugating enzyme E2 W JBrowse link X 119,160,964 119,178,031 RGD:1600115
RGD:13792537
G LOC689173 similar to TD and POZ domain containing 2 JBrowse link 9 117,438,467 117,447,457 RGD:13792537
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 11 27,023,328 27,080,575 RGD:13792537
G Maea macrophage erythroblast attacher JBrowse link 14 82,664,248 82,697,673 RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:1624291
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1600115
RGD:1624291
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:13792537
G Nedd4l NEDD4 like E3 ubiquitin protein ligase JBrowse link 18 60,392,376 60,719,720 RGD:1624291
RGD:13792537
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
RGD:1600115
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 17 18,059,382 18,060,572 RGD:1624291
RGD:13792537
RGD:1600115
G Nhlrc3 NHL repeat containing 3 JBrowse link 2 142,672,188 142,686,593 RGD:13792537
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:1600115
G Nsfl1c NSFL1 cofactor JBrowse link 3 146,980,923 147,005,478 RGD:13792537
G Otud5 OTU deubiquitinase 5 JBrowse link X 15,471,212 15,504,372 RGD:1624291
G Pcbp2 poly(rC) binding protein 2 JBrowse link 7 144,077,901 144,103,723 RGD:1624291
RGD:1600115
G Pcnp PEST proteolytic signal containing nuclear protein JBrowse link 11 47,055,641 47,070,319 RGD:1624291
RGD:1600115
G Peli1 pellino E3 ubiquitin protein ligase 1 JBrowse link 14 106,008,086 106,062,566 RGD:1600115
RGD:1624291
G Plaa phospholipase A2, activating protein JBrowse link 5 113,548,913 113,578,928 RGD:13792537
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:1624291
RGD:1600115
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Ppp2cb protein phosphatase 2 catalytic subunit beta JBrowse link 16 62,273,276 62,294,767 RGD:1624291
RGD:1600115
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma JBrowse link 6 134,804,128 134,941,912 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1600115
RGD:1624291
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:13792537
G Psma2 proteasome 20S subunit alpha 2 JBrowse link 17 53,091,937 53,102,324 RGD:13792537
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:13792537
G Psma3l proteasome subunit alpha type 3-like RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:13792537
G Psma5 proteasome 20S subunit alpha 5 JBrowse link 2 211,050,344 211,073,706 RGD:1600115
RGD:13792537
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:13792537
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:13792537
G Psma8 proteasome 20S subunit alpha 8 JBrowse link 18 6,114,757 6,182,393 RGD:13792537
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:13792537
G Psmb10 proteasome 20S subunit beta 10 JBrowse link 19 37,909,543 37,912,027 RGD:13792537
G Psmb11 proteasome subunit beta 11 JBrowse link 15 33,267,413 33,273,587 RGD:13792537
G Psmb2 proteasome 20S subunit beta 2 JBrowse link 5 144,702,004 144,734,220 RGD:13792537
G Psmb3 proteasome 20S subunit beta 3 JBrowse link 10 85,646,646 85,653,729 RGD:13792537
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:13792537
G Psmb5 proteasome 20S subunit beta 5 JBrowse link 15 33,259,039 33,263,634 RGD:1624291
RGD:13792537
RGD:1600115
G Psmb6 proteasome 20S subunit beta 6 JBrowse link 10 57,131,339 57,133,685 RGD:13792537
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:13792537
G Psmb8 proteasome 20S subunit beta 8 JBrowse link 20 3,990,809 3,993,772 RGD:13792537
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:13792537
G Psmc5 proteasome 26S subunit, ATPase 5 JBrowse link 10 94,445,877 94,451,811 RGD:1624291
RGD:1600115
G Psmd1 proteasome 26S subunit, non-ATPase 1 JBrowse link 9 93,080,618 93,155,033 RGD:13792537
G Psmd12 proteasome 26S subunit, non-ATPase 12 JBrowse link 10 95,706,808 95,725,452 RGD:8693626
RGD:13792537
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:13792537
G Psmd2 proteasome 26S subunit, non-ATPase 2 JBrowse link 11 83,934,098 83,944,725 RGD:13792537
G Psmd4 proteasome 26S subunit, non-ATPase 4 JBrowse link 2 196,198,303 196,207,569 RGD:13792537
G Psmd6 proteasome 26S subunit, non-ATPase 6 JBrowse link 15 12,407,557 12,416,153 RGD:13792537
G Psmd7 proteasome 26S subunit, non-ATPase 7 JBrowse link 19 39,639,432 39,646,718 RGD:13792537
G Psmd8 proteasome 26S subunit, non-ATPase 8 JBrowse link 1 88,116,811 88,123,643 RGD:13792537
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:13792537
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:13792537
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 JBrowse link 3 147,793,014 147,809,941 RGD:1600115
RGD:13792537
RGD:1624291
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase JBrowse link 10 70,157,621 70,220,618 RGD:1600115
RGD:1624291
G RGD1559714 similar to TDPOZ3 JBrowse link 2 195,277,647 195,279,177 RGD:13792537
G RGD1560510 similar to TDPOZ2 JBrowse link 2 194,508,831 194,511,446 RGD:13792537
G RGD1560554 similar to TDPOZ2 JBrowse link 2 195,485,668 195,553,986 RGD:13792537
G RGD1563667 similar to TDPOZ3 JBrowse link 2
9
195,152,284
117,465,991
195,554,013
117,467,757
RGD:13792537
G RGD1566337 similar to TDPOZ2 JBrowse link 2 194,874,803 194,879,455 RGD:13792537
G Rmnd5a required for meiotic nuclear division 5 homolog A JBrowse link 4 99,249,159 99,305,805 RGD:13792537
G Rmnd5b required for meiotic nuclear division 5 homolog B JBrowse link 10 34,979,902 34,990,985 RGD:13792537
G Rnf122 ring finger protein 122 JBrowse link 16 64,766,878 64,787,308 RGD:1624291
G Rnf126 ring finger protein 126 JBrowse link 7 12,820,796 12,828,325 RGD:1624291
G Rnf186 ring finger protein 186 JBrowse link 5 157,416,897 157,418,121 RGD:1624291
RGD:13792537
G Rnf187 ring finger protein 187 JBrowse link 10 45,273,400 45,279,299 RGD:1624291
RGD:1600115
G Rnf216 ring finger protein 216 JBrowse link 12 13,508,429 13,631,689 RGD:1624291
RGD:1600115
G Rnf34 ring finger protein 34 JBrowse link 12 39,164,290 39,185,209 RGD:1624291
RGD:1600115
G Rnf4 ring finger protein 4 JBrowse link 14 81,658,400 81,679,756 RGD:1600115
RGD:1624291
G Siah1 siah E3 ubiquitin protein ligase 1 JBrowse link 19 21,372,163 21,395,773 RGD:1624291
RGD:13792537
RGD:1600115
G Siah2 siah E3 ubiquitin protein ligase 2 JBrowse link 2 148,874,151 148,891,900 RGD:13792537
G Siah3 siah E3 ubiquitin protein ligase family member 3 JBrowse link 15 57,505,449 57,568,743 RGD:13792537
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
G Skp2 S-phase kinase associated protein 2 JBrowse link 2 58,506,146 58,534,211 RGD:1624291
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 12 11,433,815 11,526,465 RGD:1624291
RGD:13792537
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 JBrowse link 10 95,018,050 95,118,107 RGD:13792537
G Spop speckle type BTB/POZ protein JBrowse link 10 83,231,187 83,311,987 RGD:1624291
RGD:13792537
G Spopl speckle type BTB/POZ protein like JBrowse link 3 397,834 471,651 RGD:1624291
RGD:13792537
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 JBrowse link 5 166,913,734 166,978,534 RGD:13792537
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 JBrowse link 4 157,325,980 157,328,380 RGD:13792537
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 JBrowse link 10 14,248,199 14,253,815 RGD:13792537
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 JBrowse link 8 104,840,939 104,912,959 RGD:13792537
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1624291
G Tbl1x transducin (beta)-like 1 X-linked JBrowse link X 44,959,883 44,988,551 RGD:1624291
RGD:1600115
G Tbl1xr1 TBL1X receptor 1 JBrowse link 2 107,221,913 107,359,229 RGD:1624291
RGD:1600115
G Tbx21 T-box transcription factor 21 JBrowse link 10 85,032,799 85,049,331 RGD:1624291
RGD:1600115
G Tnfaip1 TNF alpha induced protein 1 JBrowse link 10 65,791,002 65,805,693 RGD:1624291
RGD:13792537
RGD:1600115
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:1624291
RGD:1600115
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
G Trim2 tripartite motif-containing 2 JBrowse link 2 183,145,096 183,223,819 RGD:13792537
G Trim3 tripartite motif-containing 3 JBrowse link 1 170,441,662 170,464,341 RGD:13792537
G Trim38 tripartite motif containing 38 JBrowse link 17 43,600,006 43,607,879 RGD:1624291
G Trim63 tripartite motif containing 63 JBrowse link 5 152,533,362 152,547,138 RGD:1624291
G Trim71 tripartite motif containing 71 JBrowse link 8 122,553,015 122,604,787 RGD:13792537
G Trim72 tripartite motif containing 72 JBrowse link 1 199,450,042 199,457,902 RGD:1624291
RGD:1600115
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:1624291
RGD:1600115
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 123,486,988 123,497,726 RGD:13792537
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
RGD:13792537
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 JBrowse link 2 240,626,198 240,655,874 RGD:1624291
RGD:1600115
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 JBrowse link 10 59,173,268 59,254,458 RGD:13792537
G Ube2h ubiquitin-conjugating enzyme E2H JBrowse link 4 57,511,418 57,625,147 RGD:1624291
RGD:1600115
G Ube2i ubiquitin-conjugating enzyme E2I JBrowse link 10 14,618,615 14,639,274 RGD:730030
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 14 44,289,247 44,348,691 RGD:13792537
G Ube2u ubiquitin conjugating enzyme E2 U JBrowse link 5 118,574,647 118,642,810 RGD:13792537
G Ube2w ubiquitin-conjugating enzyme E2W JBrowse link 5 29,798,845 29,812,777 RGD:1624291
RGD:13792537
RGD:1600115
G Ube3d ubiquitin protein ligase E3D JBrowse link 8 93,948,689 94,120,477 RGD:13792537
G Ube4b ubiquitination factor E4B JBrowse link 5 166,156,033 166,259,069 RGD:1624291
G Ubxn11 UBX domain protein 11 JBrowse link 5 152,332,993 152,356,647 RGD:13792537
G Ubxn2a UBX domain protein 2A JBrowse link 6 28,969,471 28,997,987 RGD:13792537
G Ubxn2b UBX domain protein 2B JBrowse link 5 19,285,368 19,314,199 RGD:13792537
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1600115
G Usp44 ubiquitin specific peptidase 44 JBrowse link 7 34,714,293 34,759,352 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:1600115
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 5 33,608,489 33,696,487 RGD:1624291
RGD:13792537
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 19 39,543,246 39,614,624 RGD:1624291
RGD:13792537
G Zfand2b zinc finger AN1-type containing 2B JBrowse link 9 82,370,887 82,373,843 RGD:1600115
RGD:1624291
G Znrf1 zinc and ring finger 1 JBrowse link 19 43,750,205 43,834,962 RGD:1624291
RGD:1600115
protein arginylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ate1 arginyltransferase 1 JBrowse link 1
1
200,810,741
200,958,564
200,885,593
201,082,100
RGD:1624291
RGD:13792537
G RGD1565611 RGD1565611 JBrowse link 10 64,174,929 64,178,612 RGD:1624291
RGD:13792537
protein catabolic process in the vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 JBrowse link 1 219,126,687 219,139,466 RGD:1624291
RGD:1600115
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:13792537
G Usp9x ubiquitin specific peptidase 9, X-linked JBrowse link X 10,510,033 10,660,555 RGD:1600115
RGD:1624291
G Zranb1 zinc finger RANBP2-type containing 1 JBrowse link 1 204,938,444 205,000,163 RGD:1624291
RGD:13792537
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 JBrowse link 12 22,665,128 22,676,079 RGD:1600115
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit JBrowse link 9 10,048,715 10,056,068 RGD:13792537
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 9 110,515,558 110,936,631 RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G LOC103694506 ubiquitin-conjugating enzyme E2 W JBrowse link X 119,160,964 119,178,031 RGD:1600115
G LOC108348078 ATP-dependent zinc metalloprotease YME1L1 JBrowse link 17 89,799,397 89,839,418 RGD:13792537
G Lonp1 lon peptidase 1, mitochondrial JBrowse link 9 10,428,853 10,441,180 RGD:13792537
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1600115
G Ngly1 N-glycanase 1 JBrowse link 15 10,405,453 10,455,973 RGD:13792537
G Oma1 OMA1 zinc metallopeptidase JBrowse link 5 122,847,624 122,900,475 RGD:1624291
RGD:1600115
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1624291
RGD:1600115
G Ube2w ubiquitin-conjugating enzyme E2W JBrowse link 5 29,798,845 29,812,777 RGD:1624291
RGD:1600115
G Yme1l1 YME1-like 1 ATPase JBrowse link 17 89,701,899 89,741,919 RGD:1624291
RGD:13792537
RGD:1600115
G Zer1 zyg-11 related, cell cycle regulator JBrowse link 3 8,662,579 8,690,486 RGD:1624291
RGD:1600115
G Zyg11b zyg-11 family member B, cell cycle regulator JBrowse link 5 127,844,062 127,878,792 RGD:1624291
RGD:1600115
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snf8 SNF8 subunit of ESCRT-II JBrowse link 10 83,856,331 83,868,621 RGD:13792537
G Vps25 vacuolar protein sorting 25 homolog JBrowse link 10 89,174,684 89,180,165 RGD:13792537
G Vps28 VPS28 subunit of ESCRT-I JBrowse link 7 117,684,339 117,688,187 RGD:1600115
RGD:13792537
G Vps36 vacuolar protein sorting 36 homolog JBrowse link 16 74,719,642 74,743,921 RGD:13792537
proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 JBrowse link 2 61,039,072 61,340,687 RGD:1624291
RGD:1600115
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 JBrowse link 8 97,535,777 97,575,661 RGD:1624291
RGD:1600115
G Capn2 calpain 2 JBrowse link 13 100,878,649 100,928,811 RGD:1624291
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:1624291
RGD:1600115
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit JBrowse link 9 10,048,715 10,056,068 RGD:1624291
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X JBrowse link 8 70,789,137 70,843,133 RGD:1624291
RGD:1600115
G Cpa1 carboxypeptidase A1 JBrowse link 4 57,952,982 57,959,109 RGD:1578424
G Cpvl carboxypeptidase, vitellogenic-like JBrowse link 4 84,026,851 84,137,172 RGD:13792537
G Cts7 cathepsin 7 JBrowse link 17 3,280,311 3,285,451 RGD:13792537
G Cts8 cathepsin 8 JBrowse link 17 3,385,851 3,397,621 RGD:13792537
G Ctsa cathepsin A JBrowse link 3 161,298,750 161,304,627 RGD:13792537
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1624291
RGD:1600115
RGD:13792537
G Ctsc cathepsin C JBrowse link 1 151,918,514 151,949,979 RGD:13792537
G Ctsf cathepsin F JBrowse link 1 220,114,228 220,119,976 RGD:13792537
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:13792537
G Ctsj cathepsin J JBrowse link 17 4,105,890 4,110,538 RGD:13792537
G Ctsk cathepsin K JBrowse link 2 196,655,469 196,666,447 RGD:1624291
RGD:13792537
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:1624291
RGD:13792537
G Ctsll3 cathepsin L-like 3 JBrowse link 17 4,256,311 4,259,625 RGD:13792537
G Ctsm cathepsin M JBrowse link 17 3,820,606 3,826,015 RGD:13792537
G Ctsq cathepsin Q JBrowse link 17 3,991,330 3,996,889 RGD:13792537
G Ctsql2 cathepsin Q-like 2 JBrowse link 17 4,062,294 4,068,108 RGD:13792537
G Ctsr cathepsin R JBrowse link 17 3,885,684 3,894,447 RGD:13792537
G Ctss cathepsin S JBrowse link 2 197,655,780 197,679,768 RGD:1624291
RGD:13792537
RGD:1600115
G Ctsw cathepsin W JBrowse link 1 220,844,579 220,847,967 RGD:13792537
G Ctsz cathepsin Z JBrowse link 3 172,527,107 172,537,877 RGD:13792537
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 JBrowse link 15 104,186,918 104,226,236 RGD:1624291
RGD:1600115
G Fap fibroblast activation protein, alpha JBrowse link 3 48,467,781 48,536,242 RGD:1624291
RGD:1600115
G Gzma granzyme A JBrowse link 2 44,968,846 44,981,436 RGD:1624291
RGD:1600115
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:1624291
G Ide insulin degrading enzyme JBrowse link 1 255,914,465 256,014,168 RGD:1626704
RGD:13792537
RGD:1624291
G Lgmn legumain JBrowse link 6 126,282,246 126,308,207 RGD:1600115
RGD:13792537
RGD:1624291
G LOC100364523 Ctsq protein-like JBrowse link 17 4,045,024 4,050,423 RGD:13792537
G Lonp1 lon peptidase 1, mitochondrial JBrowse link 9 10,428,853 10,441,180 RGD:1624291
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:1624291
G MGC114246 similar to cathepsin R JBrowse link 17 3,924,473 3,929,978 RGD:13792537
G Nrdc nardilysin convertase JBrowse link 5 128,629,949 128,694,209 RGD:13792537
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:1299253
RGD:2301095
G Psma6 proteasome 20S subunit alpha 6 JBrowse link 6 76,174,460 76,205,429 RGD:1624291
RGD:1600115
G Psmb1 proteasome 20S subunit beta 1 JBrowse link 1 57,470,878 57,491,359 RGD:1600115
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:1600115
G Psmb7 proteasome 20S subunit beta 7 JBrowse link 3 22,890,072 22,951,718 RGD:1600115
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:1600115
G RGD1308751 similar to Cathepsin L precursor (Major excreted protein) (MEP) JBrowse link 17 4,270,207 4,273,173 RGD:13792537
G RGD1564657 similar to cathepsin 1 precursor JBrowse link 17 3,210,130 3,214,421 RGD:13792537
G RGD1564827 similar to cathepsin M JBrowse link 17 4,119,288 4,123,365 RGD:13792537
G Rnf123 ring finger protein 123 JBrowse link 8 116,829,050 116,857,050 RGD:13792537
G Rspry1 ring finger and SPRY domain containing 1 JBrowse link 19 10,770,572 10,826,895 RGD:13792537
G Scpep1 serine carboxypeptidase 1 JBrowse link 10 76,230,371 76,263,866 RGD:13792537
G Testin testin gene JBrowse link 17 4,194,796 4,225,376 RGD:13792537
regulation of cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wdr91 WD repeat domain 91 JBrowse link 4 62,398,073 62,438,958 RGD:1624291
RGD:1600115
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:1624291
RGD:13792537
regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1624291
RGD:1600115
regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mylip myosin regulatory light chain interacting protein JBrowse link 17 19,682,040 19,703,681 RGD:1624291
RGD:1600115
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1624291
regulation of lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:1624291
RGD:1600115
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link 2 127,706,618 127,784,129 RGD:1624291
RGD:1600115
regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1600115
RGD:1624291
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
RGD:1600115
G Dlgap1 DLG associated protein 1 JBrowse link 9 118,277,046 119,159,807 RGD:8553458
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:1600115
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
RGD:1600115
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624291
RGD:1600115
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1600115
RGD:1624291
G Nudt15 nudix hydrolase 15 JBrowse link 15 55,417,774 55,456,698 RGD:1624291
RGD:1600115
G Pkd1 polycystin 1, transient receptor potential channel interacting JBrowse link 10 13,914,057 13,962,008 RGD:1624291
RGD:1600115
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:1624291
RGD:1600115
G Psme1 proteasome activator subunit 1 JBrowse link 15 34,256,071 34,258,947 RGD:13792537
G Psme2 proteasome activator subunit 2 JBrowse link 15 34,265,552 34,269,851 RGD:13792537
G Psme3 proteasome activator subunit 3 JBrowse link 10 89,236,256 89,244,041 RGD:1624291
RGD:1600115
G Rhbdf1 rhomboid 5 homolog 1 JBrowse link 10 15,672,370 15,685,285 RGD:1624291
RGD:1600115
G Tmf1 TATA element modulatory factor 1 JBrowse link 4 129,521,986 129,546,024 RGD:1624291
RGD:1600115
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:1624291
G Uchl5 ubiquitin C-terminal hydrolase L5 JBrowse link 13 60,568,102 60,603,812 RGD:1624291
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 1,178,785 1,216,573 RGD:1624291
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Araf A-Raf proto-oncogene, serine/threonine kinase JBrowse link X 1,369,534 1,391,603 RGD:1624291
RGD:1600115
G Commd1 copper metabolism domain containing 1 JBrowse link 14 107,664,321 107,759,974 RGD:1624291
RGD:13792537
G Foxf2 forkhead box F2 JBrowse link 17 34,150,417 34,156,450 RGD:1624291
G Glmn glomulin, FKBP associated protein JBrowse link 14 3,204,390 3,247,703 RGD:1624291
RGD:1600115
G Gna12 G protein subunit alpha 12 JBrowse link 12 15,890,202 15,971,212 RGD:1624291
RGD:1600115
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:1624291
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:1624291
RGD:1600115
G Ube2k ubiquitin-conjugating enzyme E2K JBrowse link 14 44,289,247 44,348,691 RGD:1600115
RGD:1624291
G Ubqln4 ubiquilin 4 JBrowse link 2 187,915,701 187,931,035 RGD:1600115
RGD:1624291
G Ufl1 Ufm1-specific ligase 1 JBrowse link 5 39,616,479 39,650,894 RGD:1624291
RGD:13792537
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
RGD:1600115
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lats1 large tumor suppressor kinase 1 JBrowse link 1 1,784,078 1,817,310 RGD:1624291
RGD:1600115
G Nub1 negative regulator of ubiquitin-like proteins 1 JBrowse link 4 6,950,870 6,981,400 RGD:13792537
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
G Ube3a ubiquitin protein ligase E3A JBrowse link 1 116,586,901 116,678,161 RGD:1624291
RGD:1600115
retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:1624291
RGD:1600115
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:1600115
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:1600115
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:13792537
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1624291
RGD:1600115
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:1624291
RGD:1600115
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1624291
RGD:1600115
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:1624291
RGD:1600115
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:13792537
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:1624291
RGD:1600115
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:1624291
RGD:1600115
G Selenos selenoprotein S JBrowse link 1 126,979,579 126,989,344 RGD:1600115
RGD:13792537
RGD:1624291
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
RGD:13792537
G Tmem129 transmembrane protein 129 JBrowse link 14 82,350,734 82,356,084 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
RGD:13792537
ribosome-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07064719.2 RGD:13792537
G Ltn1 listerin E3 ubiquitin protein ligase 1 JBrowse link 11 27,023,328 27,080,575 RGD:13792537
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07002848.1 RGD:13792537
G Amn1 antagonist of mitotic exit network 1 homolog JBrowse link 4 183,670,589 183,697,531 RGD:13792537
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
RGD:1600115
G Ccnf cyclin F JBrowse link 10 13,594,687 13,619,935 RGD:1624291
RGD:1600115
G Cul1 cullin 1 JBrowse link 4 77,211,814 77,283,369 RGD:1624291
RGD:13792537
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:13792537
G Cul4a cullin 4A JBrowse link 16 81,718,784 81,756,653 RGD:13792537
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:13792537
G Cul5 cullin 5 JBrowse link 8 58,199,992 58,255,149 RGD:13792537
G Dmac2 distal membrane arm assembly complex 2 JBrowse link 1 82,413,171 82,419,157 RGD:13792537
G Fbxl12 F-box and leucine-rich repeat protein 12 JBrowse link 8 21,656,636 21,662,755 RGD:13792537
G Fbxl13 F-box and leucine-rich repeat protein 13 JBrowse link 4 10,020,349 10,170,012 RGD:13792537
G Fbxl15 F-box and leucine-rich repeat protein 15 JBrowse link 1 266,075,782 266,078,023 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxl16 F-box and leucine-rich repeat protein 16 JBrowse link 10 15,176,489 15,188,729 RGD:13792537
G Fbxl17 F-box and leucine-rich repeat protein 17 JBrowse link 9 110,515,558 110,936,631 RGD:1624291
G Fbxl18 F-box and leucine-rich repeat protein 18 JBrowse link 12 13,728,155 13,751,781 RGD:13792537
G Fbxl2 F-box and leucine-rich repeat protein 2 JBrowse link 8 122,240,393 122,290,439 RGD:1624291
RGD:13792537
G Fbxl20 F-box and leucine-rich repeat protein 20 JBrowse link 10 86,036,745 86,099,699 RGD:13792537
G Fbxl21 F-box and leucine-rich repeat protein 21 JBrowse link 17 8,505,771 8,520,208 RGD:13792537
G Fbxl22 F-box and leucine-rich repeat protein 22 JBrowse link 8 72,198,043 72,204,730 RGD:13792537
G Fbxl3 F-box and leucine-rich repeat protein 3 JBrowse link 15 93,647,307 93,667,395 RGD:1624291
RGD:13792537
G Fbxl4 F-box and leucine-rich repeat protein 4 JBrowse link 5 36,555,061 36,628,920 RGD:13792537
G Fbxl5 F-box and leucine-rich repeat protein 5 JBrowse link 14 71,852,649 71,891,143 RGD:1624291
RGD:13792537
G Fbxl6 F-box and leucine-rich repeat protein 6 JBrowse link 7 117,602,056 117,604,954 RGD:13792537
G Fbxl7 F-box and leucine-rich repeat protein 7 JBrowse link 2 79,067,907 79,439,987 RGD:1624291
RGD:13792537
G Fbxl8 F-box and leucine-rich repeat protein 8 JBrowse link 19 37,216,696 37,225,701 RGD:13792537
G Fbxo17 F-box protein 17 JBrowse link 1 86,903,762 86,919,238 RGD:13792537
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
RGD:13792537
G Fbxo31 F-box protein 31 JBrowse link 19 53,487,610 53,625,673 RGD:1600115
RGD:13792537
RGD:1624291
G Fbxo33 F-box protein 33 JBrowse link 6 80,302,291 80,334,536 RGD:1600115
G Fbxo38 F-box protein 38 JBrowse link 18 57,827,391 57,874,515 RGD:1600115
RGD:1624291
G Fbxo39 F-box protein 39 JBrowse link 10 58,874,028 58,878,445 RGD:13792537
G Fbxo4 F-box protein 4 JBrowse link 2 53,797,954 53,811,134 RGD:1624291
RGD:1600115
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:13792537
G Fbxo48 F-box protein 48 JBrowse link 14 100,129,835 100,140,400 RGD:13792537
G Fbxo6 F-box protein 6 JBrowse link 5 164,956,285 164,962,075 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxo9 f-box protein 9 JBrowse link 8 85,388,331 85,413,896 RGD:1624291
RGD:13792537
RGD:1600115
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:1624291
RGD:13792537
G Fbxw4 F-box and WD repeat domain containing 4 JBrowse link 1 265,318,526 265,420,503 RGD:13792537
G Fbxw5 F-box and WD repeat domain containing 5 JBrowse link 3 2,726,705 2,731,213 RGD:1624291
RGD:1600115
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
RGD:13464262
G Kif14 kinesin family member 14 JBrowse link 13 53,350,073 53,421,992 RGD:1624291
RGD:1600115
G Lrrc29 leucine rich repeat containing 29 JBrowse link 19 37,266,782 37,282,076 RGD:13792537
G Nccrp1 NCCRP1, F-box associated domain containing JBrowse link 1
1
85,558,420
85,213,578
85,559,652
85,218,030
RGD:13792537
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:1624291
RGD:13792537
G Rnf7 ring finger protein 7 JBrowse link 8 104,326,719 104,336,098 RGD:13792537
G Skp1 S-phase kinase-associated protein 1 JBrowse link 10 37,594,578 37,609,498 RGD:1600115
RGD:13792537
RGD:1624291
G Skp2 S-phase kinase associated protein 2 JBrowse link 2 58,506,146 58,534,211 RGD:13792537
G Wwtr1 WW domain containing transcription regulator 1 JBrowse link 2 147,577,149 147,693,033 RGD:1624291
RGD:1600115
transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
ubiquitin-dependent ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07002848.1 RGD:13792537
G Amfr autocrine motility factor receptor JBrowse link 19 11,473,538 11,509,500 RGD:1624291
RGD:1600115
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 JBrowse link 9 82,393,619 82,400,537 RGD:13792537
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:13792537
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1600115
RGD:13792537
RGD:1624291
G Ccdc47 coiled-coil domain containing 47 JBrowse link 10 94,388,425 94,406,949 RGD:1624291
RGD:1600115
G Derl1 derlin 1 JBrowse link 7 97,737,176 97,759,852 RGD:1624291
RGD:13792537
G Derl2 derlin 2 JBrowse link 10 57,641,682 57,653,554 RGD:1624291
RGD:13792537
G Derl3 derlin 3 JBrowse link 20 13,692,102 13,707,645 RGD:1624291
RGD:13792537
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link 20 29,445,510 29,463,739 RGD:13792537
G Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 JBrowse link 2 243,108,443 243,151,933 RGD:13792537
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
RGD:13792537
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link 6 64,165,913 64,170,122 RGD:1624291
RGD:1600115
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 JBrowse link 3 67,538,289 67,578,308 RGD:1624291
RGD:1600115
G Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 JBrowse link 18 28,466,892 28,501,013 RGD:13792537
G Ecpas Ecm29 proteasome adaptor and scaffold JBrowse link 5 75,928,510 76,040,771 RGD:1624291
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link 14 115,314,890 115,352,871 RGD:1624291
RGD:13792537
G Erlin1 ER lipid raft associated 1 JBrowse link 1 263,810,439 263,845,762 RGD:1624291
RGD:1600115
G Erlin2 ER lipid raft associated 2 JBrowse link 16 69,179,005 69,195,452 RGD:1624291
RGD:1600115
G Faf2 Fas associated factor family member 2 JBrowse link 17 10,485,650 10,527,886 RGD:1600115
RGD:1624291
G Fbxo17 F-box protein 17 JBrowse link 1 86,903,762 86,919,238 RGD:13792537
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
RGD:13792537
G Fbxo44 F-box protein 44 JBrowse link 5 164,962,921 164,972,273 RGD:13792537
G Fbxo6 F-box protein 6 JBrowse link 5 164,956,285 164,962,075 RGD:1624291
RGD:13792537
RGD:1600115
G Foxred2 FAD-dependent oxidoreductase domain containing 2 JBrowse link 7 119,172,189 119,186,670 RGD:1624291
RGD:13792537
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1600115
RGD:13792537
RGD:1624291
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:13792537
G Jkamp JNK1/MAPK8-associated membrane protein JBrowse link 6 94,835,845 94,849,784 RGD:1624291
G LOC103694875 derlin-3 RGD:13792537
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
RGD:13792537
G Marchf6 membrane associated ring-CH-type finger 6 JBrowse link 2 84,533,546 84,608,743 RGD:13792537
G Nccrp1 NCCRP1, F-box associated domain containing JBrowse link 1
1
85,558,420
85,213,578
85,559,652
85,218,030
RGD:13792537
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:1600115
RGD:13792537
RGD:1624291
G Psmc6 proteasome 26S subunit, ATPase 6 JBrowse link 15 19,667,453 19,688,916 RGD:13792537
G Rnf103 ring finger protein 103 JBrowse link 4 99,398,479 99,415,193 RGD:1600115
RGD:1624291
G Rnf121 ring finger protein 121 JBrowse link 1 167,095,916 167,165,257 RGD:13792537
G Rnf185 ring finger protein 185 JBrowse link 14 83,648,400 83,685,273 RGD:1624291
RGD:1600115
G Rnf5 ring finger protein 5 JBrowse link 20 4,366,244 4,368,690 RGD:1600115
RGD:1624291
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:1624291
RGD:1600115
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 6 115,572,683 115,616,904 RGD:13792537
G Sel1l2 SEL1L2 adaptor subunit of ERAD E3 ligase JBrowse link 3 134,281,809 134,406,560 RGD:13792537
G Selenos selenoprotein S JBrowse link 1 126,979,579 126,989,344 RGD:1600115
RGD:13792537
RGD:1624291
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:1624291
RGD:13792537
RGD:1600115
G Sgtb small glutamine rich tetratricopeptide repeat containing beta JBrowse link 2 34,185,938 34,222,428 RGD:13792537
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B JBrowse link 8 123,303,910 123,370,729 RGD:1624291
RGD:1600115
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link 10 15,197,754 15,200,035 RGD:1600115
RGD:1624291
G Syvn1 synoviolin 1 JBrowse link 1 221,409,281 221,416,229 RGD:1624291
RGD:13792537
G Tmem129 transmembrane protein 129 JBrowse link 14 82,350,734 82,356,084 RGD:1624291
RGD:1600115
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:1600115
RGD:1624291
G Tmub1 transmembrane and ubiquitin-like domain containing 1 JBrowse link 4 7,257,752 7,260,318 RGD:1624291
RGD:1600115
G Tmub2 transmembrane and ubiquitin-like domain containing 2 JBrowse link 10 90,230,428 90,234,874 RGD:1600115
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
RGD:1600115
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1600115
RGD:1624291
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 JBrowse link 20 11,700,089 11,721,823 RGD:1624291
RGD:13792537
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 JBrowse link 5 48,274,387 48,292,699 RGD:1624291
RGD:1600115
G Ube2j2 ubiquitin-conjugating enzyme E2, J2 JBrowse link 5 173,372,659 173,387,084 RGD:1624291
RGD:13792537
G Ube4a ubiquitination factor E4A JBrowse link 8 49,229,713 49,271,894 RGD:13792537
G Ube4b ubiquitination factor E4B JBrowse link 5 166,156,033 166,259,069 RGD:13792537
G Ubqln1 ubiquilin 1 JBrowse link 17 6,840,441 6,878,842 RGD:1600115
RGD:13792537
RGD:1624291
G Ubqln2 ubiquilin 2 JBrowse link X 18,723,313 18,726,732 RGD:1624291
RGD:13792537
G Ubxn4 UBX domain protein 4 JBrowse link 13 44,956,963 44,989,653 RGD:1624291
RGD:1600115
G Ubxn8 UBX domain protein 8 JBrowse link 16 62,251,243 62,272,838 RGD:1624291
RGD:1600115
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:13792537
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1600115
RGD:13792537
RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1600115
RGD:13792537
RGD:1624291
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link 14 78,640,707 78,665,224 RGD:1624291
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1624291
RGD:13792537
RGD:1600115
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07012426.1 RGD:13792537
G AABR07029581.1 RGD:13792537
G AABR07035541.3 RGD:13792537
G AABR07044940.1 RGD:13792537
G AABR07066792.1 RGD:1600115
G AC135026.1 RGD:13792537
G Adrm1 adhesion regulating molecule 1 JBrowse link 3 175,548,181 175,552,943 RGD:13792537
G Amfr autocrine motility factor receptor JBrowse link 19 11,473,538 11,509,500 RGD:1624291
RGD:13792537
G Amn1 antagonist of mitotic exit network 1 homolog JBrowse link 4 183,670,589 183,697,531 RGD:13792537
G Anapc11 anaphase promoting complex subunit 11 JBrowse link 10 109,774,779 109,785,877 RGD:13792537
G Anapc2 anaphase promoting complex subunit 2 JBrowse link 3 2,490,496 2,502,247 RGD:1600115
G Ankib1 ankyrin repeat and IBR domain containing 1 JBrowse link 4 27,473,477 27,597,206 RGD:13792537
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 JBrowse link 6 108,630,790 108,796,096 RGD:1624291
RGD:13792537
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 8 64,166,359 64,268,555 RGD:1624291
RGD:13792537
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 8 117,387,004 117,446,085 RGD:1624291
RGD:13792537
G Arrb1 arrestin, beta 1 JBrowse link 1 164,502,099 164,573,947 RGD:1624291
RGD:1600115
G Arrdc1 arrestin domain containing 1 JBrowse link 3 2,129,876 2,137,161 RGD:1624291
RGD:1600115
G Arrdc4 arrestin domain containing 4 JBrowse link 1 129,766,097 129,780,076 RGD:1624291
G Asb2 ankyrin repeat and SOCS box-containing 2 JBrowse link 6 127,212,325 127,248,451 RGD:1624291
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
G Bfar bifunctional apoptosis regulator JBrowse link 10
10
1,464,658
1,464,783
1,471,152
1,497,653
RGD:1624291
G Birc6 baculoviral IAP repeat-containing 6 JBrowse link 6 21,900,763 22,092,484 RGD:13792537
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 1 265,100,094 265,270,263 RGD:1624291
G Cacul1 CDK2-associated, cullin domain 1 JBrowse link 1 281,814,226 281,874,675 RGD:1600115
G Cbl Cbl proto-oncogene JBrowse link 8 48,481,256 48,564,775 RGD:1600115
RGD:1624291
G Cblc Cbl proto-oncogene C JBrowse link 1 80,699,321 80,716,146 RGD:1624291
RGD:1600115
G Chfr checkpoint with forkhead and ring finger domains JBrowse link 12 52,562,594 52,596,162 RGD:1624291
RGD:13792537
G Cnot4 CCR4-NOT transcription complex, subunit 4 JBrowse link 4 62,561,443 62,663,225 RGD:1600115
RGD:1624291
G Cops3 COP9 signalosome subunit 3 JBrowse link 10 46,182,680 46,206,083 RGD:13792537
G Cul1 cullin 1 JBrowse link 4 77,211,814 77,283,369 RGD:13792537
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:13792537
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1600115
RGD:1624291
G Cul4a cullin 4A JBrowse link 16 81,718,784 81,756,653 RGD:1624291
RGD:13792537
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:13792537
G Cul5 cullin 5 JBrowse link 8 58,199,992 58,255,149 RGD:1600115
RGD:13792537
G Cul7 cullin 7 JBrowse link 9 16,629,491 16,643,527 RGD:1600115
G Cul9 cullin 9 JBrowse link 9 16,747,449 16,844,033 RGD:1600115
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
G Dcst1 DC-STAMP domain containing 1 JBrowse link 2 188,672,549 188,690,004 RGD:1600115
RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1600115
RGD:1624291
G Dmac2 distal membrane arm assembly complex 2 JBrowse link 1 82,413,171 82,419,157 RGD:13792537
G Dtl denticleless E3 ubiquitin protein ligase homolog JBrowse link 13 110,219,276 110,257,345 RGD:1600115
RGD:1624291
G Dtx3l deltex E3 ubiquitin ligase 3L JBrowse link 11
11
67,758,093
67,768,542
67,767,623
67,772,428
RGD:1600115
RGD:1624291
G Eloc elongin C JBrowse link 5 2,042,991 2,059,357 RGD:13792537
G Fbxl12 F-box and leucine-rich repeat protein 12 JBrowse link 8 21,656,636 21,662,755 RGD:1624291
G Fbxl13 F-box and leucine-rich repeat protein 13 JBrowse link 4 10,020,349 10,170,012 RGD:13792537
G Fbxl14 F-box and leucine-rich repeat protein 14 JBrowse link 4 151,986,890 151,990,706 RGD:1624291
G Fbxl15 F-box and leucine-rich repeat protein 15 JBrowse link 1 266,075,782 266,078,023 RGD:13792537
G Fbxl16 F-box and leucine-rich repeat protein 16 JBrowse link 10 15,176,489 15,188,729 RGD:13792537
G Fbxl2 F-box and leucine-rich repeat protein 2 JBrowse link 8 122,240,393 122,290,439 RGD:1624291
RGD:13792537
G Fbxl20 F-box and leucine-rich repeat protein 20 JBrowse link 10 86,036,745 86,099,699 RGD:13792537
G Fbxl4 F-box and leucine-rich repeat protein 4 JBrowse link 5 36,555,061 36,628,920 RGD:13792537
G Fbxl5 F-box and leucine-rich repeat protein 5 JBrowse link 14 71,852,649 71,891,143 RGD:13792537
G Fbxl7 F-box and leucine-rich repeat protein 7 JBrowse link 2 79,067,907 79,439,987 RGD:13792537
G Fbxo10 F-box protein 10 JBrowse link 5 60,589,881 60,636,551 RGD:1624291
RGD:13792537
G Fbxo11 F-box protein 11 JBrowse link 6 11,662,356 11,737,427 RGD:13792537
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
G Fbxo32 F-box protein 32 JBrowse link 7 98,065,664 98,098,071 RGD:728366
G Fbxo4 F-box protein 4 JBrowse link 2 53,797,954 53,811,134 RGD:1624291
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1624291
RGD:13792537
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:1600115
RGD:1624291
G Fbxo8 F-box protein 8 JBrowse link 16 37,131,566 37,177,033 RGD:1624291
RGD:1600115
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:13792537
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 JBrowse link 20 50,652,489 50,783,937 RGD:1600115
RGD:13792537
RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 JBrowse link 17 53,229,997 53,777,474 RGD:13792537
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 9 60,451,476 60,843,160 RGD:13792537
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:1624291
RGD:13792537
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 21,474,627 21,603,348 RGD:13792537
G Itch itchy E3 ubiquitin protein ligase JBrowse link 3 150,660,665 150,752,016 RGD:1624291
RGD:13792537
G Kctd10 potassium channel tetramerization domain containing 10 JBrowse link 12 47,992,079 48,010,531 RGD:1624291
G Kctd21 potassium channel tetramerization domain containing 21 JBrowse link 1 162,307,746 162,325,284 RGD:1624291
RGD:1600115
G Kctd6 potassium channel tetramerization domain containing 6 JBrowse link 15 18,484,607 18,493,188 RGD:1624291
RGD:1600115
G Keap1 Kelch-like ECH-associated protein 1 JBrowse link 8 22,250,518 22,259,868 RGD:1624291
RGD:1600115
G Klhl15 kelch-like family member 15 JBrowse link X 63,342,277 63,390,915 RGD:1600115
RGD:1624291
G Klhl25 kelch-like family member 25 JBrowse link 1 137,333,880 137,359,107 RGD:1600115
RGD:13792537
RGD:1624291
G Klhl3 kelch-like family member 3 JBrowse link 17 6,924,423 7,029,374 RGD:1600115
RGD:1624291
G Klhl8 kelch-like family member 8 JBrowse link 14 7,169,517 7,215,025 RGD:1600115
RGD:1624291
G Lnx1 ligand of numb-protein X 1 JBrowse link 14 36,047,136 36,149,740 RGD:1624291
RGD:1600115
G LOC100909715 uncharacterized LOC100909715 RGD:13792537
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like JBrowse link 1 169,720,247 169,721,788 RGD:1600115
G LOC100910646 E3 ubiquitin-protein ligase RLIM-like JBrowse link X 73,757,664 73,778,757 RGD:1624291
G LOC100911548 SPRY domain-containing SOCS box protein 2-like JBrowse link 9 20,217,278 20,219,677 RGD:13792537
RGD:1600115
G LOC100911679 TD and POZ domain-containing protein 2-like JBrowse link 2 194,084,048 194,085,124 RGD:13792537
G LOC100911860 ubiquitin carboxyl-terminal hydrolase 40-like JBrowse link 9 91,037,406 91,100,490 RGD:1600115
G LOC103689927 protein RMD5 homolog B JBrowse link 10 37,073,588 37,084,671 RGD:13792537
G LOC108348250 cullin-7 JBrowse link 9 16,346,529 16,354,742 RGD:1600115
G LOC689173 similar to TD and POZ domain containing 2 JBrowse link 9 117,438,467 117,447,457 RGD:13792537
G LOC689730 similar to ubiquitin specific peptidase 17 (homolog) RGD:1600115
G Lrrc29 leucine rich repeat containing 29 JBrowse link 19 37,266,782 37,282,076 RGD:13792537
G Maea macrophage erythroblast attacher JBrowse link 14 82,664,248 82,697,673 RGD:13792537
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 2 43,329,516 43,393,203 RGD:729224
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:1600115
RGD:1624291
G Mib1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 18 1,970,914 2,094,920 RGD:1600115
RGD:1624291
G Mylip myosin regulatory light chain interacting protein JBrowse link 17 19,682,040 19,703,681 RGD:1624291
RGD:13792537
G Ndfip1 Nedd4 family interacting protein 1 JBrowse link 18 31,574,759 31,625,286 RGD:13792537
G Ndfip2 Nedd4 family interacting protein 2 JBrowse link 15 89,407,426 89,458,983 RGD:13792537
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:1600115
RGD:1624291
RGD:13792537
G Nedd4l NEDD4 like E3 ubiquitin protein ligase JBrowse link 18 60,392,376 60,719,720 RGD:1624291
RGD:13792537
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:1600115
RGD:13792537
RGD:1624291
G Ntan1 N-terminal asparagine amidase JBrowse link 10 3,218,414 3,235,229 RGD:1624291
RGD:13792537
G Nub1 negative regulator of ubiquitin-like proteins 1 JBrowse link 4 6,950,870 6,981,400 RGD:1624291
G Os9 OS9, endoplasmic reticulum lectin JBrowse link 7 70,378,625 70,407,135 RGD:1600115
RGD:1624291
G Ppp1r11 protein phosphatase 1, regulatory (inhibitor) subunit 11 JBrowse link 20 2,094,931 2,098,438 RGD:1600115
RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1600115
RGD:13792537
RGD:1624291
G Psma7 proteasome 20S subunit alpha 7 JBrowse link 3 175,420,042 175,426,384 RGD:1600115
G Psmc2 proteasome 26S subunit, ATPase 2 JBrowse link 4 9,867,132 9,881,383 RGD:1600115
RGD:1624291
G Psmd11 proteasome 26S subunit, non-ATPase 11 JBrowse link 10 67,810,655 67,857,562 RGD:1600115
RGD:13792537
RGD:1624291
G Psmd13 proteasome 26S subunit, non-ATPase 13 JBrowse link 1 213,636,159 213,648,499 RGD:13792537
G Psmd3 proteasome 26S subunit, non-ATPase 3 JBrowse link 10 86,599,007 86,611,180 RGD:13792537
G Psmf1 proteasome inhibitor subunit 1 JBrowse link 3 147,238,111 147,263,275 RGD:1600115
RGD:13792537
RGD:1624291
G Rbbp6 RB binding protein 6, ubiquitin ligase JBrowse link 1 192,933,264 192,965,160 RGD:1600115
RGD:1624291
G Rbx1 ring-box 1 JBrowse link 7 122,700,849 122,710,907 RGD:13792537
G Rchy1 ring finger and CHY zinc finger domain containing 1 JBrowse link 14 17,