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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule catabolic process
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Accession:GO:0044282 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule catabolism


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 JBrowse link 4 123,516,553 123,564,067 RGD:1600115
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 JBrowse link 7 26,375,866 26,425,838 RGD:1600115
2-oxobutyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link 17 77,287,580 77,304,482 RGD:727286
4-hydroxyproline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 JBrowse link 1 261,291,742 261,319,743 RGD:1624291
RGD:1600115
adenosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1600115
RGD:13792537
RGD:1624291
G Adal adenosine deaminase-like JBrowse link 3 113,091,696 113,109,841 RGD:13792537
alcohol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:1624291
arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddah1 dimethylarginine dimethylaminohydrolase 1 JBrowse link 2 251,634,368 251,766,009 RGD:1624291
RGD:1600115
G Ddah2 dimethylarginine dimethylaminohydrolase 2 JBrowse link 20 5,049,260 5,052,573 RGD:1600115
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:1624291
RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:8553334
RGD:13792537
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:1624291
RGD:13792537
RGD:1600115
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:1600115
RGD:13792537
RGD:1624291
arginine catabolic process to glutamate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:13792537
arginine catabolic process to ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:8693655
RGD:13792537
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:1358311
RGD:13792537
RGD:8693655
arginine catabolic process to proline via ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:13792537
arginine deiminase pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Padi3 peptidyl arginine deiminase 3 JBrowse link 5 159,309,000 159,336,429 RGD:69926
G Padi4 peptidyl arginine deiminase 4 JBrowse link 5 159,260,675 159,293,906 RGD:1624291
RGD:1600115
asparagine catabolic process via L-aspartate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asrgl1 asparaginase like 1 JBrowse link 1 225,309,737 225,329,743 RGD:1299508
RGD:13792537
RGD:1624291
aspartate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddo D-aspartate oxidase JBrowse link 20 48,739,812 48,758,958 RGD:1624291
RGD:13792537
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:1624291
RGD:1600115
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link 19 9,587,637 9,613,323 RGD:1624291
RGD:13792537
beta-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 JBrowse link 6 108,146,552 108,167,185 RGD:1599052
bile acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1d1 aldo-keto reductase family 1, member D1 JBrowse link 4 65,110,706 65,143,930 RGD:1600115
branched-chain amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:1624291
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1582175
RGD:1624291
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha JBrowse link 1 82,423,291 82,452,094 RGD:631719
RGD:13792537
RGD:1600115
RGD:1624291
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta JBrowse link 8 91,464,229 91,656,134 RGD:1624291
RGD:13792537
RGD:1600115
G Bckdk branched chain ketoacid dehydrogenase kinase JBrowse link 1 199,351,628 199,356,299 RGD:68918
RGD:68712
butyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acads acyl-CoA dehydrogenase short chain JBrowse link 12 47,254,503 47,263,747 RGD:2317678
RGD:13792537
canonical glycolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:2302788
RGD:1624291
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302788
G Foxk1 forkhead box K1 JBrowse link 12 14,183,436 14,244,634 RGD:1600115
RGD:1624291
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
G LOC100911625 gamma-enolase-like JBrowse link 9 20,251,564 20,260,465 RGD:2302788
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:13792537
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:13792537
RGD:1600115
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:13792537
carboxylic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:1624291
RGD:1600115
G Pon3 paraoxonase 3 JBrowse link 4 30,311,981 30,338,679 RGD:1624291
cellular amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il4i1 interleukin 4 induced 1 JBrowse link 1 100,811,727 100,836,901 RGD:13792537
G Lao1 L-amino acid oxidase 1 JBrowse link 5 138,011,760 138,021,653 RGD:13792537
G Pcca propionyl-CoA carboxylase subunit alpha JBrowse link 15 108,960,509 109,306,879 RGD:633579
G Pccb propionyl-CoA carboxylase subunit beta JBrowse link 8 109,368,887 109,418,871 RGD:633580
G RGD1308564 similar to L-amino acid oxidase 1 JBrowse link 10 43,715,911 43,733,329 RGD:13792537
cholesterol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1d1 aldo-keto reductase family 1, member D1 JBrowse link 4 65,110,706 65,143,930 RGD:1600115
RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:13792537
G Cel carboxyl ester lipase JBrowse link 3 7,134,021 7,141,522 RGD:1624291
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 JBrowse link 9 81,968,285 81,998,213 RGD:1600115
RGD:1624291
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 JBrowse link 9 19,804,079 19,880,346 RGD:1624291
RGD:1600115
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 JBrowse link 6 132,242,328 132,273,788 RGD:13792537
RGD:1624291
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 JBrowse link 5 19,358,734 19,368,431 RGD:70534
RGD:1600115
RGD:1624291
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 JBrowse link 1 199,248,084 199,251,745 RGD:1599972
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:1624291
RGD:1600115
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
cobalamin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cubn cubilin JBrowse link 17 80,584,921 80,807,181 RGD:8554807
cytidine deamination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:1624291
RGD:1600115
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:1600115
G Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 JBrowse link 9 14,529,218 14,542,731 RGD:1600115
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1600115
G Cda cytidine deaminase JBrowse link 5 156,703,579 156,734,541 RGD:2316616
RGD:13792537
RGD:1624291
G Cdadc1 cytidine and dCMP deaminase domain containing 1 JBrowse link 15 39,865,094 39,894,122 RGD:1624291
RGD:1600115
G LOC100909857 cytidine deaminase-like JBrowse link 5 156,756,678 156,781,306 RGD:13792537
D-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dao D-amino-acid oxidase JBrowse link 12 48,353,691 48,373,647 RGD:1600115
RGD:13792537
RGD:1624291
D-amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddo D-aspartate oxidase JBrowse link 20 48,739,812 48,758,958 RGD:1624291
RGD:1600115
D-gluconate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idnk Idnk, gluconokinase JBrowse link 17 6,885,323 6,892,603 RGD:1600115
RGD:13792537
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:13792537
D-glucuronate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link 5 135,482,068 135,498,693 RGD:1624291
RGD:13825440
RGD:13792537
D-ribose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt5 nudix hydrolase 5 JBrowse link 17 76,387,027 76,410,309 RGD:1600115
RGD:1624291
G Rbks ribokinase JBrowse link 6 26,051,568 26,128,762 RGD:1600115
D-serine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dao D-amino-acid oxidase JBrowse link 12 48,353,691 48,373,647 RGD:1600115
RGD:13792537
RGD:1624291
D-xylose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhdh dihydrodiol dehydrogenase JBrowse link 1 101,465,937 101,476,867 RGD:1624291
RGD:13792537
deoxyadenosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1624291
RGD:1600115
deoxyribonucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dera deoxyribose-phosphate aldolase JBrowse link 4 171,748,254 171,826,414 RGD:1624291
RGD:1600115
dermatan sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idua alpha-L-iduronidase JBrowse link 14 2,041,828 2,056,762 RGD:1624291
RGD:1600115
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:2306662
RGD:2306673
dicarboxylic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot4 acyl-CoA thioesterase 4 JBrowse link 6 107,517,668 107,522,952 RGD:1624291
RGD:1600115
G Acot8 acyl-CoA thioesterase 8 JBrowse link 3 161,260,837 161,272,495 RGD:1600115
RGD:1624291
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt3 nudix hydrolase 3 JBrowse link 20 7,155,744 7,208,292 RGD:1624291
RGD:1600115
ethanol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:1624291
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:5129089
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:1624291
RGD:1600115
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 JBrowse link 1 240,584,233 240,601,843 RGD:1600115
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 JBrowse link 5 61,382,351 61,387,359 RGD:1600115
G Aldh2 aldehyde dehydrogenase 2 family member JBrowse link 12 40,466,418 40,498,813 RGD:1600115
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 JBrowse link 1 219,145,457 219,181,536 RGD:1600115
G LOC100910235 sulfotransferase 1C1-like JBrowse link 9 4,323,997 4,328,175 RGD:1624291
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:1624291
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
RGD:1600115
G Sult1e1 sulfotransferase family 1E member 1 JBrowse link 14 22,070,861 22,089,264 RGD:1624291
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:1624291
farnesol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b10 aldo-keto reductase family 1 member B10 JBrowse link 4 61,813,265 61,830,371 RGD:1624291
G Akr1c3 aldo-keto reductase family 1, member C3 JBrowse link 17 69,761,126 69,778,021 RGD:1624291
fatty acid alpha-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hacl1 2-hydroxyacyl-CoA lyase 1 JBrowse link 16 7,720,047 7,758,119 RGD:1624291
RGD:13792537
RGD:708588
G Hao1 hydroxyacid oxidase 1 JBrowse link 3 127,444,900 127,500,709 RGD:1624291
RGD:13792537
G Pex13 peroxisomal biogenesis factor 13 JBrowse link 14 108,394,299 108,411,994 RGD:1624291
RGD:1600115
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link 17 77,287,580 77,304,482 RGD:727286
RGD:13792537
RGD:1624291
G Slc27a2 solute carrier family 27 member 2 JBrowse link 3 119,014,620 119,052,531 RGD:1600115
RGD:1624291
fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link 7 132,294,564 132,343,169 RGD:1600115
RGD:1624291
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link 2 225,335,708 225,389,120 RGD:1624291
RGD:1600115
G Acaa1a acetyl-CoA acyltransferase 1A JBrowse link 8 128,027,880 128,036,471 RGD:8554082
RGD:13792537
RGD:1624291
G Acaa1b acetyl-Coenzyme A acyltransferase 1B JBrowse link 8 127,836,235 127,845,296 RGD:13792537
G Acaa2 acetyl-CoA acyltransferase 2 JBrowse link 18 70,733,872 70,762,395 RGD:2317624
RGD:1600115
RGD:13792537
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1358266
RGD:13792537
RGD:1600115
RGD:1624291
G Acads acyl-CoA dehydrogenase short chain JBrowse link 12 47,254,503 47,263,747 RGD:632244
G Acadsb acyl-CoA dehydrogenase, short/branched chain JBrowse link 1 201,981,362 202,022,771 RGD:1358267
G Acadvl acyl-CoA dehydrogenase, very long chain JBrowse link 10 56,619,321 56,624,468 RGD:631729
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:13792537
RGD:1600115
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link 1 47,972,399 47,992,654 RGD:13792537
G Acat2l1 acetyl-CoA acetyltransferase 2-like 1 JBrowse link 1 48,008,574 48,025,730 RGD:13792537
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:1600115
G Acox2 acyl-CoA oxidase 2 JBrowse link 15 18,449,304 18,481,472 RGD:2299949
RGD:2299971
G Acox3 acyl-CoA oxidase 3, pristanoyl JBrowse link 14 80,313,202 80,358,115 RGD:1600115
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:1624291
RGD:1600115
G Auh AU RNA binding methylglutaconyl-CoA hydratase JBrowse link 17 12,310,178 12,405,224 RGD:13792537
G Bdh2 3-hydroxybutyrate dehydrogenase 2 JBrowse link 2 240,461,505 240,482,149 RGD:1624291
RGD:1600115
G Cpt1a carnitine palmitoyltransferase 1A JBrowse link 1 218,568,157 218,629,679 RGD:1600115
G Cpt1b carnitine palmitoyltransferase 1B JBrowse link 7 130,395,211 130,404,731 RGD:1600115
G Cpt1c carnitine palmitoyltransferase 1c JBrowse link 1 100,955,094 100,970,579 RGD:1600115
G Cpt2 carnitine palmitoyltransferase 2 JBrowse link 5 127,505,646 127,523,016 RGD:1600744
RGD:13792537
G Crot carnitine O-octanoyltransferase JBrowse link 4 22,079,837 22,116,265 RGD:1600115
RGD:1624291
G Decr1 2,4-dienoyl-CoA reductase 1 JBrowse link 5 29,573,893 29,601,731 RGD:1600115
RGD:1624291
G Ech1 enoyl-CoA hydratase 1 JBrowse link 1 87,009,798 87,015,996 RGD:1600115
G Echdc1 ethylmalonyl-CoA decarboxylase 1 JBrowse link 1 30,874,410 30,921,117 RGD:13792537
G Echdc2 enoyl CoA hydratase domain containing 2 JBrowse link 5 127,770,570 127,789,568 RGD:13792537
G Echs1 enoyl-CoA hydratase, short chain 1 JBrowse link 1 212,570,213 212,579,040 RGD:68828
RGD:13792537
RGD:1600115
RGD:1624291
RGD:2317616
G Eci1 enoyl-CoA delta isomerase 1 JBrowse link 10 13,797,573 13,810,918 RGD:61567
RGD:13792537
RGD:1600115
RGD:1624291
G Eci2 enoyl-CoA delta isomerase 2 JBrowse link 17 30,556,926 30,573,324 RGD:2306199
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase JBrowse link 11 82,945,104 82,978,364 RGD:1600115
RGD:13792537
RGD:1624291
G Fabp3 fatty acid binding protein 3 JBrowse link 5 148,528,854 148,535,597 RGD:728828
G Hadh hydroxyacyl-CoA dehydrogenase JBrowse link 2 236,353,445 236,395,067 RGD:2302227
RGD:1600115
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha JBrowse link 6 27,589,840 27,628,921 RGD:1600572
RGD:13792537
RGD:1624291
RGD:1600115
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta JBrowse link 6 27,555,408 27,589,539 RGD:1600572
RGD:13792537
RGD:1600115
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 JBrowse link 18 44,810,462 44,897,677 RGD:1600115
RGD:1624291
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:1624291
RGD:1600115
G LOC100911186 enoyl-CoA hydratase, mitochondrial-like JBrowse link 1 141,821,909 141,830,770 RGD:1600115
RGD:13792537
G Pex2 peroxisomal biogenesis factor 2 JBrowse link 2 98,251,756 98,269,185 RGD:1624291
RGD:1600115
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
RGD:1600115
G Ppard peroxisome proliferator-activated receptor delta JBrowse link 20 7,818,289 7,883,482 RGD:1600115
RGD:1624291
G Sesn2 sestrin 2 JBrowse link 5 150,684,891 150,703,846 RGD:1624291
RGD:1600115
G Slc25a17 solute carrier family 25 member 17 JBrowse link 7 122,539,293 122,581,777 RGD:1624291
RGD:1600115
G Slc27a2 solute carrier family 27 member 2 JBrowse link 3 119,014,620 119,052,531 RGD:1600115
RGD:1624291
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acad11 acyl-CoA dehydrogenase family, member 11 JBrowse link 8 112,594,758 112,676,275 RGD:1624291
RGD:1600115
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:2317678
RGD:13792537
RGD:1624291
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:2317678
RGD:1624291
RGD:1600115
G Acads acyl-CoA dehydrogenase short chain JBrowse link 12 47,254,503 47,263,747 RGD:2317678
RGD:1600115
RGD:1624291
G Acadvl acyl-CoA dehydrogenase, very long chain JBrowse link 10 56,619,321 56,624,468 RGD:1624291
RGD:1600115
G Etfa electron transfer flavoprotein subunit alpha JBrowse link 8 60,028,786 60,086,352 RGD:1624291
RGD:13792537
RGD:1600115
G Etfb electron transfer flavoprotein subunit beta JBrowse link 1 98,472,776 98,486,940 RGD:1624291
RGD:1600115
G Etfdh electron transfer flavoprotein dehydrogenase JBrowse link 2 178,367,547 178,389,641 RGD:1624291
RGD:1600115
G Gcdh glutaryl-CoA dehydrogenase JBrowse link 19 26,000,497 26,006,970 RGD:1624291
RGD:1600115
G Ivd isovaleryl-CoA dehydrogenase JBrowse link 3 110,669,355 110,689,789 RGD:8554099
RGD:1624291
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:2299949
RGD:13792537
RGD:1600115
RGD:1624291
G Acox2 acyl-CoA oxidase 2 JBrowse link 15 18,449,304 18,481,472 RGD:1600115
RGD:13792537
RGD:1624291
G Acox3 acyl-CoA oxidase 3, pristanoyl JBrowse link 14 80,313,202 80,358,115 RGD:2299949
RGD:13792537
RGD:1600115
RGD:2299971
RGD:2299969
G Acoxl acyl-CoA oxidase-like JBrowse link 3 120,414,311 120,724,809 RGD:13792537
fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:1624291
G Acadvl acyl-CoA dehydrogenase, very long chain JBrowse link 10 56,619,321 56,624,468 RGD:1624291
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
G Acot8 acyl-CoA thioesterase 8 JBrowse link 3 161,260,837 161,272,495 RGD:13792537
G Eci2 enoyl-CoA delta isomerase 2 JBrowse link 17 30,556,926 30,573,324 RGD:1624291
G Faah fatty acid amide hydrolase JBrowse link 5 134,852,899 134,872,095 RGD:1625736
RGD:13792537
RGD:14397564
RGD:1624291
RGD:8554689
G Faahl fatty-acid amide hydrolase-like JBrowse link 5 134,330,204 134,349,400 RGD:8554689
RGD:13792537
RGD:14397564
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:625499
G Lpin1 lipin 1 JBrowse link 6 41,796,214 41,905,149 RGD:1624291
RGD:13792537
G Lpin2 lipin 2 JBrowse link 9 119,517,101 119,591,533 RGD:13792537
G Lpin3 lipin 3 JBrowse link 3 156,874,805 156,899,601 RGD:13792537
G Pcca propionyl-CoA carboxylase subunit alpha JBrowse link 15 108,960,509 109,306,879 RGD:633579
G Pccb propionyl-CoA carboxylase subunit beta JBrowse link 8 109,368,887 109,418,871 RGD:633580
folic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:1624291
G Pm20d2 peptidase M20 domain containing 2 JBrowse link 5 48,416,005 48,437,054 RGD:13792537
formaldehyde catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:13792537
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:1624291
RGD:13792537
G Esd esterase D JBrowse link 15 56,756,848 56,776,348 RGD:1600115
galactose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gale UDP-galactose-4-epimerase JBrowse link 5 154,310,453 154,314,959 RGD:1600115
RGD:13792537
RGD:1624291
G Glb1 galactosidase, beta 1 JBrowse link 8 122,439,328 122,511,939 RGD:1598981
G Pgm1 phosphoglucomutase 1 JBrowse link 5 118,743,632 118,803,055 RGD:13792537
galactose catabolic process via UDP-galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gale UDP-galactose-4-epimerase JBrowse link 5 154,310,453 154,314,959 RGD:13792537
G Galk1 galactokinase 1 JBrowse link 10 104,560,322 104,564,499 RGD:13792537
G Galk2 galactokinase 2 JBrowse link 3 118,137,097 118,268,838 RGD:13792537
G Galm galactose mutarotase JBrowse link 6 2,808,988 2,860,742 RGD:13792537
G Galt galactose-1-phosphate uridylyltransferase JBrowse link 5 58,144,679 58,147,946 RGD:13792537
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link 10 7,093,406 7,200,439 RGD:631980
RGD:13792537
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 JBrowse link 17 42,133,076 42,159,413 RGD:1600115
RGD:1624291
RGD:632258
GDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link 15 52,265,557 52,268,081 RGD:1624291
RGD:1600115
glucose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:1624291
RGD:1600115
G Hk2 hexokinase 2 JBrowse link 4 113,559,396 113,609,897 RGD:632917
G Lrp5 LDL receptor related protein 5 JBrowse link 1 218,816,833 218,920,147 RGD:1624291
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link 13 47,413,453 47,440,682 RGD:2304071
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:13792537
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:13792537
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:13792537
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldha lactate dehydrogenase A JBrowse link 1 102,900,288 102,909,713 RGD:1624291
glucuronoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd10 abhydrolase domain containing 10 JBrowse link 11 60,053,719 60,068,142 RGD:1624291
G Gusb glucuronidase, beta JBrowse link 12 30,202,066 30,215,583 RGD:1624291
glutamate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glud1 glutamate dehydrogenase 1 JBrowse link 16 10,661,486 10,695,557 RGD:1601355
RGD:1624291
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:1624291
RGD:13504861
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link 19 9,587,637 9,613,323 RGD:1624291
RGD:13504861
glutamate catabolic process to aspartate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:1624291
RGD:1600115
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link 19 9,587,637 9,613,323 RGD:1624291
RGD:1600115
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adhfe1 alcohol dehydrogenase, iron containing, 1 JBrowse link 5 9,403,194 9,429,783 RGD:1600115
RGD:1624291
glutamate decarboxylation to succinate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gad2 glutamate decarboxylase 2 JBrowse link 17 89,171,576 89,234,770 RGD:1625237
glutamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gls glutaminase JBrowse link 9 54,212,622 54,284,879 RGD:728510
RGD:13792537
RGD:1624291
RGD:1600115
G Gls2 glutaminase 2 JBrowse link 7 2,605,679 2,621,853 RGD:13792537
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link 14 33,580,541 33,614,919 RGD:633710
glycerol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gk glycerol kinase JBrowse link X 54,227,291 54,303,897 RGD:1600115
G Gpd2 glycerol-3-phosphate dehydrogenase 2 JBrowse link 3 43,223,892 43,359,069 RGD:1600115
G Tkfc triokinase and FMN cyclase JBrowse link 1 226,642,901 226,657,698 RGD:13792537
G Tpi1 triosephosphate isomerase 1 JBrowse link 4 157,328,375 157,331,905 RGD:13792537
glycine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gldc glycine decarboxylase JBrowse link 1 248,295,140 248,377,122 RGD:1624291
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amt aminomethyltransferase JBrowse link 8 117,068,388 117,078,633 RGD:1624291
G Gcsh glycine cleavage system protein H JBrowse link 19 49,522,054 49,532,811 RGD:1598699
G Gldc glycine decarboxylase JBrowse link 1 248,295,140 248,377,122 RGD:1642728
RGD:13792537
glycolate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hao1 hydroxyacid oxidase 1 JBrowse link 3 127,444,900 127,500,709 RGD:1624291
RGD:1600115
glycolytic process from galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galk1 galactokinase 1 JBrowse link 10 104,560,322 104,564,499 RGD:1624291
RGD:1600115
G Galt galactose-1-phosphate uridylyltransferase JBrowse link 5 58,144,679 58,147,946 RGD:1624291
glyoxylate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link 9 100,281,339 100,291,292 RGD:1624291
RGD:1600115
G Agxt2 alanine-glyoxylate aminotransferase 2 JBrowse link 2 60,337,667 60,379,144 RGD:1624291
RGD:13792537
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 JBrowse link 1 261,291,742 261,319,743 RGD:1624291
RGD:1600115
GMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
RGD:1600115
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:1600115
G Prtfdc1 phosphoribosyl transferase domain containing 1 JBrowse link 17 87,926,242 88,037,040 RGD:1624291
histidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link 7 34,362,635 34,406,282 RGD:13792537
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1624291
RGD:13792537
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:1624291
RGD:1600115
G Uroc1 urocanate hydratase 1 JBrowse link 4 122,244,744 122,276,357 RGD:1624291
RGD:13792537
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd1 amidohydrolase domain containing 1 JBrowse link 7 34,362,635 34,406,282 RGD:1600115
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1600115
histidine catabolic process to glutamate and formate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Hal histidine ammonia lyase JBrowse link 7 34,326,087 34,356,413 RGD:1600115
homocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Blmh bleomycin hydrolase JBrowse link 10 63,197,367 63,240,447 RGD:13792537
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1600115
RGD:1624291
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:1624291
RGD:1600115
homogentisate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:13792537
hyaluronan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:1600115
RGD:1624291
G Cemip cell migration inducing hyaluronidase JBrowse link 1 146,069,774 146,226,320 RGD:1624291
RGD:1600115
G Cemip2 cell migration inducing hyaluronidase 2 JBrowse link 1 239,397,322 239,474,931 RGD:1624291
RGD:1600115
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:1624291
G Hyal1 hyaluronidase 1 JBrowse link 8 116,332,834 116,337,522 RGD:1600115
RGD:1624291
G Hyal2 hyaluronidase 2 JBrowse link 8 116,324,062 116,328,978 RGD:8553259
RGD:1624291
RGD:1600115
G Hyal3 hyaluronidase 3 JBrowse link 8 116,336,512 116,342,147 RGD:1600115
RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
inosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnp purine nucleoside phosphorylase JBrowse link 15 27,875,883 27,883,566 RGD:1624291
RGD:1600115
inositol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Miox myo-inositol oxygenase JBrowse link 7 130,308,707 130,311,205 RGD:1600115
RGD:1624291
inositol phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743914
inositol phosphate dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impa1 inositol monophosphatase 1 JBrowse link 2 93,675,203 93,696,355 RGD:2302240
RGD:13792537
RGD:1624291
RGD:1600115
G Impa2 inositol monophosphatase 2 JBrowse link 18 63,016,577 63,050,123 RGD:1624291
RGD:13792537
RGD:1600115
G Inpp1 inositol polyphosphate-1-phosphatase JBrowse link 9 53,544,602 53,574,303 RGD:13792537
G Inpp5a inositol polyphosphate-5-phosphatase A JBrowse link 1 211,732,163 211,920,844 RGD:13792537
G Inpp5b inositol polyphosphate-5-phosphatase B JBrowse link 5 142,731,767 142,796,305 RGD:13792537
G Inpp5e inositol polyphosphate-5-phosphatase E JBrowse link 3 3,843,307 3,856,154 RGD:1624291
G Inpp5j inositol polyphosphate-5-phosphatase J JBrowse link 14 83,730,861 83,742,016 RGD:13792537
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
RGD:13792537
G LOC103689941 type II inositol 1,4,5-trisphosphate 5-phosphatase-like JBrowse link 5 142,280,816 142,331,538 RGD:13792537
G Mtmr2 myotubularin related protein 2 JBrowse link 8 12,283,471 12,334,014 RGD:1624291
RGD:1600115
G Mtmr7 myotubularin related protein 7 JBrowse link 16 54,765,214 54,856,255 RGD:1624291
RGD:1600115
G Ocrl OCRL, inositol polyphosphate-5-phosphatase JBrowse link X 134,742,226 134,793,411 RGD:13792537
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
RGD:13792537
G Synj2 synaptojanin 2 JBrowse link 1 46,835,922 46,932,544 RGD:69390
RGD:13792537
isoleucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
RGD:1600115
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1582175
RGD:1600115
RGD:1624291
ketone body catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
RGD:1600115
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link 1 47,972,399 47,992,654 RGD:2326095
G Oxct1 3-oxoacid CoA transferase 1 JBrowse link 2 53,859,738 54,007,733 RGD:1624291
RGD:1600115
G Oxct2b 3-oxoacid CoA transferase 2B JBrowse link 5 140,813,957 140,815,711 RGD:1600115
ketone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oxct1 3-oxoacid CoA transferase 1 JBrowse link 2 53,859,738 54,007,733 RGD:1624291
RGD:1600115
L-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link 9 100,281,339 100,291,292 RGD:1624291
RGD:1600115
G Gpt glutamic--pyruvic transaminase JBrowse link 7 117,759,083 117,761,932 RGD:1600115
L-alanine catabolic process, by transamination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt2 alanine-glyoxylate aminotransferase 2 JBrowse link 2 60,337,667 60,379,144 RGD:1624291
RGD:13792537
L-cysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link 9 100,281,339 100,291,292 RGD:1624291
RGD:1600115
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1624291
G Cdo1 cysteine dioxygenase type 1 JBrowse link 18 40,702,027 40,716,901 RGD:2301357
RGD:13792537
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link 7 143,781,520 143,810,880 RGD:13800536
L-cysteine catabolic process to taurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link 7 143,781,520 143,810,880 RGD:13800536
L-kynurenine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kyat1 kynurenine aminotransferase 1 JBrowse link 3 8,752,289 8,785,617 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1600115
L-lysine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aass aminoadipate-semialdehyde synthase JBrowse link 4 50,152,005 50,208,935 RGD:1624291
RGD:1600115
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pipox pipecolic acid and sarcosine oxidase JBrowse link 10 64,951,986 64,964,865 RGD:1624291
RGD:13792537
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aadat aminoadipate aminotransferase JBrowse link 16 32,832,001 32,868,680 RGD:1600115
G Aass aminoadipate-semialdehyde synthase JBrowse link 4 50,152,005 50,208,935 RGD:1600115
G Dlst dihydrolipoamide S-succinyltransferase JBrowse link 6 108,936,534 108,961,322 RGD:1600115
L-phenylalanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:1600115
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:1600115
G Hgd homogentisate 1, 2-dioxygenase JBrowse link 11 65,983,221 66,034,555 RGD:1600115
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link 12 38,828,606 38,839,956 RGD:1600115
G Pah phenylalanine hydroxylase JBrowse link 7 28,066,639 28,129,772 RGD:1600115
G Qdpr quinoid dihydropteridine reductase JBrowse link 14 70,164,682 70,178,284 RGD:5128604
RGD:13792537
G Tat tyrosine aminotransferase JBrowse link 19 41,675,639 41,686,195 RGD:1600115
L-serine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1624291
G Sds serine dehydratase JBrowse link 12 41,620,429 41,627,741 RGD:1600115
RGD:13792537
RGD:1624291
G Sdsl serine dehydratase-like JBrowse link 12 41,636,994 41,647,205 RGD:13792537
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:13792537
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:13792537
L-xylitol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:1624291
RGD:1600115
lactate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldhd lactate dehydrogenase D JBrowse link 19 43,826,989 43,848,937 RGD:13792537
leucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Auh AU RNA binding methylglutaconyl-CoA hydratase JBrowse link 17 12,310,178 12,405,224 RGD:1600115
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase JBrowse link 5 154,294,841 154,308,582 RGD:13792537
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 JBrowse link 8 83,069,837 83,204,778 RGD:13792537
G Ivd isovaleryl-CoA dehydrogenase JBrowse link 3 110,669,355 110,689,789 RGD:1600115
RGD:8554099
G Mccc1 methylcrotonoyl-CoA carboxylase 1 JBrowse link 2 122,550,777 122,690,540 RGD:1600115
G Mccc2 methylcrotonoyl-CoA carboxylase 2 JBrowse link 2 30,175,017 30,246,028 RGD:1600115
RGD:13792537
long-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:2317678
RGD:13792537
G Adtrp androgen-dependent TFPI-regulating protein JBrowse link 17 22,619,913 22,688,296 RGD:1600115
RGD:1624291
G Aig1 androgen-induced 1 JBrowse link 1 7,816,841 8,038,805 RGD:1624291
RGD:1600115
G Lipe lipase E, hormone sensitive type JBrowse link 1 82,248,031 82,266,727 RGD:1624291
malonate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsf3 acyl-CoA synthetase family member 3 JBrowse link 19 55,594,801 55,635,312 RGD:1624291
RGD:1600115
medium-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:2317678
RGD:13792537
RGD:1624291
methionine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mat1a methionine adenosyltransferase 1A JBrowse link 16 18,690,649 18,709,135 RGD:1600115
RGD:1624291
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hagh hydroxyacyl glutathione hydrolase JBrowse link 10 14,215,913 14,230,506 RGD:1600115
G Haghl hydroxyacylglutathione hydrolase-like JBrowse link 10 15,152,736 15,157,221 RGD:1600115
G Pnkd PNKD metallo-beta-lactamase domain containing JBrowse link 9 81,566,074 81,634,531 RGD:1600115
N-acetylneuraminate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd2 amidohydrolase domain containing 2 JBrowse link 10 13,528,400 13,536,949 RGD:1600115
G Gnpda1 glucosamine-6-phosphate deaminase 1 JBrowse link 18 31,479,117 31,489,154 RGD:13792537
G Gnpda2 glucosamine-6-phosphate deaminase 2 JBrowse link 14 62,628,102 62,646,158 RGD:13792537
G Nagk N-acetylglucosamine kinase JBrowse link 4 115,473,848 115,485,027 RGD:1600115
G Npl N-acetylneuraminate pyruvate lyase JBrowse link 13 70,938,073 70,981,179 RGD:1600115
G Renbp renin binding protein JBrowse link X 156,854,490 156,863,548 RGD:1600115
negative regulation of arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 13 50,091,644 50,153,808 RGD:1624291
RGD:1600115
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acacb acetyl-CoA carboxylase beta JBrowse link 12 48,127,149 48,238,969 RGD:1624291
RGD:1600115
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
RGD:1600115
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:2314644
G Dbi diazepam binding inhibitor, acyl-CoA binding protein JBrowse link 13 36,147,667 36,156,076 RGD:2316274
G Plin5 perilipin 5 JBrowse link 9 10,956,013 10,961,782 RGD:1600115
RGD:1624291
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase JBrowse link 4 183,655,968 183,665,757 RGD:1624291
RGD:1600115
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a12 solute carrier family 25 member 12 JBrowse link 3 57,881,951 57,998,214 RGD:13628741
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
nicotinamide riboside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtap methylthioadenosine phosphorylase JBrowse link 5 107,711,077 107,777,530 RGD:1624291
G Pnp purine nucleoside phosphorylase JBrowse link 15 27,875,883 27,883,566 RGD:1624291
RGD:1600115
ornithine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:1624291
RGD:1600115
pentose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpe ribulose-5-phosphate-3-epimerase JBrowse link 9 73,687,684 73,713,643 RGD:13792537
phenylacetate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acaa1a acetyl-CoA acyltransferase 1A JBrowse link 8 128,027,880 128,036,471 RGD:13792537
G Acaa1b acetyl-Coenzyme A acyltransferase 1B JBrowse link 8 127,836,235 127,845,296 RGD:13792537
G Pon3 paraoxonase 3 JBrowse link 4 30,311,981 30,338,679 RGD:1303961
phylloquinone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbr1 carbonyl reductase 1 JBrowse link 11 33,813,041 33,815,418 RGD:2316273
G Cbr3 carbonyl reductase 3 JBrowse link 11 33,909,417 33,917,674 RGD:2316293
polyprenol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srd5a3 steroid 5 alpha-reductase 3 JBrowse link 14 34,554,769 34,570,423 RGD:1624291
RGD:13792537
RGD:1600115
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link 7 132,294,564 132,343,169 RGD:1600115
RGD:1624291
G Acsl5 acyl-CoA synthetase long-chain family member 5 JBrowse link 1 276,240,703 276,290,012 RGD:2312802
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1624291
RGD:1600115
G Cpt1a carnitine palmitoyltransferase 1A JBrowse link 1 218,568,157 218,629,679 RGD:2311346
G Fabp1 fatty acid binding protein 1 JBrowse link 4 99,063,181 99,066,957 RGD:1626442
G Irs1 insulin receptor substrate 1 JBrowse link 9 88,033,668 88,086,488 RGD:1624291
RGD:1600115
G Irs2 insulin receptor substrate 2 JBrowse link 16 83,824,515 83,848,569 RGD:1624291
RGD:1600115
G Plin5 perilipin 5 JBrowse link 9 10,956,013 10,961,782 RGD:8553692
RGD:1624291
G Twist1 twist family bHLH transcription factor 1 JBrowse link 6 53,401,241 53,403,235 RGD:1624291
RGD:1600115
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
RGD:1600115
prenylcysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcyox1 prenylcysteine oxidase 1 JBrowse link 4 118,187,133 118,198,029 RGD:1624291
RGD:1600115
G Pcyox1l prenylcysteine oxidase 1 like JBrowse link 18 57,021,081 57,031,552 RGD:1600115
progesterone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1c3 aldo-keto reductase family 1, member C3 JBrowse link 17 69,761,126 69,778,021 RGD:1624291
RGD:1600115
proline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dao D-amino-acid oxidase JBrowse link 12 48,353,691 48,373,647 RGD:1600115
RGD:13792537
RGD:1624291
proline catabolic process to glutamate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 JBrowse link 5 158,090,238 158,115,725 RGD:1600115
G Iffo2 intermediate filament family orphan 2 JBrowse link 5 158,042,587 158,083,311 RGD:1600115
G Prodh1 proline dehydrogenase 1 JBrowse link 11 87,058,478 87,075,785 RGD:13792537
G Prodh2 proline dehydrogenase 2 JBrowse link 1 88,955,125 88,968,501 RGD:13792537
G Tas1r2 taste 1 receptor member 2 JBrowse link 5 158,119,894 158,135,733 RGD:1600115
propionate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:13792537
prostaglandin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd16a abhydrolase domain containing 16A JBrowse link 20 5,080,070 5,094,935 RGD:1624291
RGD:1600115
G Cbr1 carbonyl reductase 1 JBrowse link 11 33,813,041 33,815,418 RGD:69801
purine ribonucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 JBrowse link 9 19,446,807 19,457,946 RGD:1624291
RGD:1600115
pyridoxal phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxp pyridoxal phosphatase JBrowse link 7 120,140,460 120,145,908 RGD:1624291
RGD:1600115
pyrimidine nucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upb1 beta-ureidopropionase 1 JBrowse link 20 14,167,383 14,193,724 RGD:1600115
RGD:1624291
quinolinate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Qprt quinolinate phosphoribosyltransferase JBrowse link 1 198,544,262 198,559,556 RGD:1624291
RGD:13792537
regulation of fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
G Cpt1a carnitine palmitoyltransferase 1A JBrowse link 1 218,568,157 218,629,679 RGD:1600733
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1624291
RGD:1600115
G Mlycd malonyl-CoA decarboxylase JBrowse link 19 52,032,950 52,048,773 RGD:1600797
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1625611
G Tysnd1 trypsin domain containing 1 JBrowse link 20 31,313,018 31,318,736 RGD:1624291
RGD:13792537
RGD:1600115
retinoic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link 8 59,344,097 59,352,135 RGD:1600115
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 1 256,382,861 256,386,729 RGD:1624291
RGD:1600115
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 JBrowse link 4 116,261,796 116,278,615 RGD:6771354
RGD:1624291
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 JBrowse link 1 256,369,410 256,380,649 RGD:1624291
RGD:1600115
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:730275
RGD:1624291
sarcosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:13792537
selenocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Scly selenocysteine lyase JBrowse link 9 98,438,408 98,459,075 RGD:12793035
serine family amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Thnsl2 threonine synthase-like 2 JBrowse link 4 98,976,559 98,997,187 RGD:1624291
RGD:13792537
short-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ces1d carboxylesterase 1D JBrowse link 19 15,195,514 15,239,827 RGD:1624291
RGD:1600115
sorbitol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:1624291
RGD:1600115
threonine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gcat glycine C-acetyltransferase JBrowse link 7 120,263,068 120,269,365 RGD:1600115
G LOC688286 similar to threonine aldolase 1 JBrowse link 10 106,877,585 106,883,706 RGD:13792537
G Sds serine dehydratase JBrowse link 12 41,620,429 41,627,741 RGD:13792537
G Sdsl serine dehydratase-like JBrowse link 12 41,636,994 41,647,205 RGD:13792537
G Tdh L-threonine dehydrogenase JBrowse link 15 46,667,926 46,682,752 RGD:1624291
RGD:13792537
thymidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1624291
RGD:1600115
tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd aminocarboxymuconate semialdehyde decarboxylase JBrowse link 13 44,424,689 44,468,734 RGD:70243
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:1600115
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1624291
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:2303721
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2303721
RGD:13792537
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1624291
RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:2290190
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2290543
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:1600115
RGD:13792537
RGD:1624291
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:13792537
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:1600115
RGD:1624291
tyrosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:13792537
RGD:1600115
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:1600115
G Hpd 4-hydroxyphenylpyruvate dioxygenase JBrowse link 12 38,828,606 38,839,956 RGD:632936
RGD:13792537
RGD:8554707
G Tat tyrosine aminotransferase JBrowse link 19 41,675,639 41,686,195 RGD:1624291
RGD:1600115
UDP-glucose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galt galactose-1-phosphate uridylyltransferase JBrowse link 5 58,144,679 58,147,946 RGD:1598677
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase JBrowse link 10 34,518,392 34,537,214 RGD:1624291
RGD:1600115
urate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Uox urate oxidase JBrowse link 2 252,452,282 252,488,497 RGD:1600115
RGD:12859077
uridine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1624291
RGD:1600115
valine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 JBrowse link 6 108,146,552 108,167,185 RGD:1599052
RGD:13792537
RGD:1600115
RGD:1624291
G Hibadh 3-hydroxyisobutyrate dehydrogenase JBrowse link 4 82,604,369 82,702,429 RGD:1600115
RGD:13792537
RGD:1624291
G Hibch 3-hydroxyisobutyryl-CoA hydrolase JBrowse link 9 53,446,185 53,526,727 RGD:1600115
very long-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
RGD:13673760
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link 7 132,294,564 132,343,169 RGD:1600115
RGD:1624291
RGD:13673760
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link 2 225,335,708 225,389,120 RGD:1624291
RGD:1600115
G Acot2 acyl-CoA thioesterase 2 JBrowse link 6 107,460,596 107,468,324 RGD:2315867
G Slc27a2 solute carrier family 27 member 2 JBrowse link 3 119,014,620 119,052,531 RGD:1624291
RGD:13792537
RGD:1600115
G Slc27a4 solute carrier family 27 member 4 JBrowse link 3 8,363,937 8,376,858 RGD:1624291
RGD:13792537
vitamin D catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 JBrowse link 3 168,097,484 168,111,920 RGD:625496
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:69373
RGD:1624291
G Fgf23 fibroblast growth factor 23 JBrowse link 4 159,622,404 159,630,082 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    metabolic process 10729
      small molecule metabolic process 1711
        small molecule catabolic process 334
          alcohol catabolic process + 50
          dibenzo-p-dioxin catabolic process 1
          formaldehyde catabolic process 3
          hypochlorous acid catabolic process 0
          ketone body catabolic process + 4
          ketone catabolic process + 9
          monosaccharide catabolic process + 29
          nucleobase-containing small molecule catabolic process + 23
          organic acid catabolic process + 223
          thiocyanate catabolic process 0
          urate catabolic process 1
          urea catabolic process + 0
          vitamin catabolic process + 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.