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ONTOLOGY REPORT - ANNOTATIONS


Term:cilium organization
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Accession:GO:0044782 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent.
Synonyms:exact_synonym: microtubule-based flagellum organization
 only_in_taxon: NCBITaxon:2759 ! Eukaryota


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cilium organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Catip ciliogenesis associated TTC17 interacting protein JBrowse link 9 81,644,239 81,652,045 RGD:1600115
RGD:13792537
RGD:1624291
G Cep78 centrosomal protein 78 JBrowse link 1 233,185,815 233,214,876 RGD:1624291
G Cfap126 cilia and flagella associated protein 126 JBrowse link 13 89,480,058 89,495,949 RGD:1624291
RGD:13792537
G Dzip1 DAZ interacting zinc finger protein 1 JBrowse link 15 104,117,551 104,168,574 RGD:1624291
G Eno4 enolase 4 JBrowse link 1 280,097,061 280,129,750 RGD:1624291
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:1624291
RGD:13792537
G Fam161b FAM161 centrosomal protein B JBrowse link 6 108,060,019 108,076,303 RGD:13792537
G Iqcg IQ motif containing G JBrowse link 11 70,967,228 71,007,708 RGD:13792537
G Kifap3 kinesin-associated protein 3 JBrowse link 13 82,072,497 82,217,256 RGD:13792537
G Mark4 microtubule affinity regulating kinase 4 JBrowse link 1 80,335,517 80,367,366 RGD:1624291
G Mns1 meiosis-specific nuclear structural 1 JBrowse link 8 79,054,240 79,075,119 RGD:1624291
RGD:13792537
G Nectin2 nectin cell adhesion molecule 2 JBrowse link 1 80,631,449 80,666,617 RGD:1624291
G Odf2 outer dense fiber of sperm tails 2 JBrowse link 3 8,449,733 8,495,764 RGD:1624291
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link 14 6,602,004 6,645,257 RGD:1624291
G Ropn1 rhophilin associated tail protein 1 JBrowse link 11 69,326,785 69,355,788 RGD:1624291
RGD:1600115
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link 10 103,713,045 103,730,145 RGD:1624291
G Tsga10ip testis specific 10 interacting protein JBrowse link 1 220,772,592 220,786,952 RGD:13792537
G Ttc17 tetratricopeptide repeat domain 17 JBrowse link 3 83,198,829 83,306,622 RGD:1624291
RGD:13792537
RGD:1600115
G Ttc29 tetratricopeptide repeat domain 29 JBrowse link 19 33,205,576 33,424,955 RGD:1624291
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1624291
G Zic2 Zic family member 2 JBrowse link 15 108,908,366 108,913,812 RGD:1624291
axonemal central apparatus assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 1 165,515,718 165,530,163 RGD:1624291
G Hydin Hydin, axonemal central pair apparatus protein JBrowse link 19 41,036,507 41,379,634 RGD:1624291
G Spag17 sperm associated antigen 17 JBrowse link 2 202,159,659 202,452,361 RGD:1624291
RGD:13792537
axonemal dynein complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1624291
RGD:1600115
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Ccdc65 coiled-coil domain containing 65 JBrowse link 7 140,383,395 140,397,186 RGD:13792537
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
G Dnaaf2 dynein, axonemal, assembly factor 2 JBrowse link 6 91,481,439 91,490,189 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf3 dynein, axonemal, assembly factor 3 JBrowse link 1 72,874,131 72,882,867 RGD:1624291
RGD:1600115
G Dnaaf6 dynein axonemal assembly factor 6 JBrowse link X 111,389,557 111,439,399 RGD:1624291
G Dnai4 dynein axonemal intermediate chain 4 JBrowse link 5 122,551,370 122,642,161 RGD:1600115
RGD:1624291
G Drc1 dynein regulatory complex subunit 1 JBrowse link 6 27,425,237 27,460,038 RGD:1624291
RGD:13792537
RGD:1600115
G Spag1 sperm associated antigen 1 JBrowse link 7 74,994,379 75,054,294 RGD:1600115
RGD:13792537
axonemal microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif19 kinesin family member 19 JBrowse link 10 103,308,392 103,334,466 RGD:1624291
axoneme assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005983.1 RGD:1600115
G AABR07005985.1 RGD:1600115
G AABR07030901.1 RGD:13792537
G Ak7 adenylate kinase 7 JBrowse link 6 129,538,648 129,606,960 RGD:1624291
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:1624291
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
RGD:13792537
G Cfap206 cilia and flagella associated protein 206 JBrowse link 5 50,148,685 50,193,580 RGD:1600115
G Cluap1 clusterin associated protein 1 JBrowse link 10 11,847,058 11,878,792 RGD:1624291
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:13792537
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1600115
RGD:1624291
G Gas8 growth arrest specific 8 JBrowse link 19 56,316,367 56,335,873 RGD:1624291
RGD:1600115
G Hoatz HOATZ cilia and flagella associated protein JBrowse link 8 55,471,705 55,490,973 RGD:1624291
G Jhy junctional cadherin complex regulator JBrowse link 8 45,084,067 45,140,570 RGD:1624291
RGD:13792537
G LOC102550841 uncharacterized LOC102550841 JBrowse link 9 76,913,521 77,007,087 RGD:13792537
G LOC103689994 radial spoke head protein 4 homolog A JBrowse link 20 33,945,770 33,962,077 RGD:13792537
G Lrguk leucine-rich repeats and guanylate kinase domain containing JBrowse link 4 61,419,987 61,544,748 RGD:1624291
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 29,562,165 29,602,934 RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
RGD:13792537
G Rp1l1 RP1 like 1 JBrowse link 15 47,344,380 47,384,461 RGD:13792537
G Rsph1 radial spoke head component 1 JBrowse link 20 9,998,698 10,020,719 RGD:1624291
RGD:13792537
G Rsph4a radial spoke head component 4A JBrowse link 20 32,450,701 32,467,362 RGD:1624291
RGD:13792537
G Rsph6a radial spoke head 6 homolog A JBrowse link 1 79,959,555 79,979,217 RGD:13792537
G Rsph9 radial spoke head component 9 JBrowse link 9 17,224,589 17,245,093 RGD:1624291
RGD:13792537
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
RGD:13792537
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:1600115
RGD:1624291
G Ttll1 tubulin tyrosine ligase like 1 JBrowse link 7 124,338,396 124,367,719 RGD:1624291
G Ulk4 unc-51 like kinase 4 JBrowse link 8 129,631,003 129,919,080 RGD:1624291
ciliary basal body organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccp110 centriolar coiled-coil protein 110 JBrowse link 1 188,417,012 188,444,991 RGD:1624291
RGD:13792537
G Crocc ciliary rootlet coiled-coil, rootletin JBrowse link 5 159,540,453 159,583,194 RGD:1624291
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1600115
RGD:1624291
G Jhy junctional cadherin complex regulator JBrowse link 8 45,084,067 45,140,570 RGD:13792537
G Rttn rotatin JBrowse link 18 86,071,884 86,247,486 RGD:13792537
G Ulk4 unc-51 like kinase 4 JBrowse link 8 129,631,003 129,919,080 RGD:1624291
ciliary basal body-plasma membrane docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:1624291
ciliary transition zone assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:1624291
G Dzip1l DAZ interacting zinc finger protein 1-like JBrowse link 8 107,875,659 107,916,298 RGD:1624291
cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07007032.1 RGD:1600115
RGD:13792537
G AABR07043288.1 RGD:13792537
G AABR07056633.1 RGD:13792537
G AABR07056636.1 RGD:13792537
G Abcc4 ATP binding cassette subfamily C member 4 JBrowse link 15 103,695,415 103,927,980 RGD:1624291
G Ablim1 actin-binding LIM protein 1 JBrowse link 1 277,853,877 278,043,096 RGD:1624291
G Ablim3 actin binding LIM protein family, member 3 JBrowse link 18 57,126,534 57,245,965 RGD:1624291
RGD:13792537
G Actr2 actin related protein 2 JBrowse link 14 104,338,486 104,375,840 RGD:1624291
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:1600115
RGD:1624291
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1600115
RGD:1624291
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:1624291
G Arl13b ADP-ribosylation factor like GTPase 13B JBrowse link 7 1,122,567 1,188,209 RGD:1624291
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:1600115
RGD:13792537
RGD:1624291
G Arl6 ADP-ribosylation factor like GTPase 6 JBrowse link 11 42,858,476 42,884,324 RGD:1624291
RGD:13792537
G Armc9 armadillo repeat containing 9 JBrowse link 9 93,172,718 93,299,119 RGD:1600115
RGD:13792537
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 JBrowse link 7 104,670,076 104,951,090 RGD:1600115
RGD:13792537
RGD:1624291
G Atp6v1d ATPase H+ transporting V1 subunit D JBrowse link 6 102,032,271 102,047,754 RGD:1624291
G Atxn10 ataxin 10 JBrowse link 7 126,228,416 126,351,728 RGD:1624291
G Avil advillin JBrowse link 7 70,292,565 70,310,588 RGD:1624291
RGD:1600115
G B9d1 B9 domain containing 1 JBrowse link 10 47,784,294 47,794,399 RGD:1600115
RGD:13792537
RGD:1624291
G B9d2 B9 domain containing 2 JBrowse link 1 82,473,254 82,479,704 RGD:1624291
RGD:13792537
RGD:1600115
G Bbip1 BBSome interacting protein 1 JBrowse link 1 274,649,085 274,663,544 RGD:1624291
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:1624291
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:1624291
RGD:13792537
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Bbs5 Bardet-Biedl syndrome 5 JBrowse link 3 55,886,695 55,907,717 RGD:1624291
RGD:13792537
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link 2 123,283,402 123,322,991 RGD:13792537
G Bbs9 Bardet-Biedl syndrome 9 JBrowse link 8 23,491,929 24,074,524 RGD:1624291
RGD:13792537
G C2cd3 C2 domain containing 3 centriole elongation regulator JBrowse link 1 165,382,279 165,480,088 RGD:1624291
G Cby1 chibby family member 1, beta catenin antagonist JBrowse link 7 120,891,930 120,898,318 RGD:1624291
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:1624291
G Ccdc113 coiled-coil domain containing 113 JBrowse link 19 9,912,124 9,932,183 RGD:1624291
G Ccdc28b coiled coil domain containing 28B JBrowse link 5 147,823,446 147,828,449 RGD:1624291
G Ccdc65 coiled-coil domain containing 65 JBrowse link 7 140,383,395 140,397,186 RGD:1624291
G Ccdc66 coiled-coil domain containing 66 JBrowse link 16 3,107,119 3,139,188 RGD:1624291
G Ccno cyclin O JBrowse link 2 44,857,043 44,860,317 RGD:1624291
G Cdc14a cell division cycle 14A JBrowse link 2 219,302,577 219,458,345 RGD:13792537
G Cdc14b cell division cycle 14B JBrowse link 17 1,709,703 1,797,732 RGD:13792537
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 JBrowse link 2 211,183,410 211,207,458 RGD:1624291
RGD:1600115
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 JBrowse link 8 117,620,293 117,648,034 RGD:1624291
G Cenpj centromere protein J JBrowse link 15 36,745,672 36,809,228 RGD:13792537
G Cep126 centrosomal protein 126 JBrowse link 8 6,237,838 6,305,127 RGD:1624291
RGD:13792537
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:13792537
G Cep162 centrosomal protein 162 JBrowse link 8 94,863,282 94,921,917 RGD:1624291
RGD:1600115
G Cep164 centrosomal protein 164 JBrowse link 8 50,069,282 50,132,477 RGD:1624291
RGD:13792537
G Cep19 centrosomal protein 19 JBrowse link 11 71,921,713 71,938,335 RGD:1600115
RGD:1624291
G Cep20 centrosomal protein 20 JBrowse link 10 730,215 751,061 RGD:1624291
RGD:13792537
G Cep250 centrosomal protein 250 JBrowse link 3 151,508,366 151,544,631 RGD:1624291
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:1624291
G Cep41 centrosomal protein 41 JBrowse link 4 57,966,783 58,006,931 RGD:1600115
RGD:1624291
G Cep70 centrosomal protein 70 JBrowse link 8 107,495,326 107,548,274 RGD:1600115
G Cep83 centrosomal protein 83 JBrowse link 7 35,739,553 35,847,618 RGD:1624291
RGD:1600115
G Cep89 centrosomal protein 89 JBrowse link 1 91,663,723 91,705,979 RGD:1624291
G Cfap20 cilia and flagella associated protein 20 JBrowse link 19 10,024,938 10,038,838 RGD:1600115
RGD:13792537
RGD:1624291
G Cfap298 cilia and flagella associated protein 298 JBrowse link 11 31,094,103 31,103,487 RGD:1624291
G Cfap410 cilia and flagella associated protein 410 JBrowse link 20 11,417,428 11,424,301 RGD:1624291
RGD:13792537
G Cfap43 cilia and flagella associated protein 43 JBrowse link 1 267,511,359 267,598,642 RGD:13792537
G Cfap44 cilia and flagella associated protein 44 JBrowse link 11 61,160,793 61,237,056 RGD:13792537
G Cfap52 cilia and flagella associated protein 52 JBrowse link 10 54,470,834 54,512,157 RGD:13792537
G Cfap53 cilia and flagella associated protein 53 JBrowse link 18 70,263,290 70,330,420 RGD:1600115
G Cfap54 cilia and flagella associated protein 54 JBrowse link 7 33,867,656 33,916,487 RGD:1624291
G Cfap70 cilia and flagella associated protein 70 JBrowse link 15 4,285,049 4,350,707 RGD:1624291
G Cibar1 CBY1 interacting BAR domain containing 1 JBrowse link 5 25,732,457 25,750,953 RGD:1624291
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:13792537
RGD:1624291
G Cluap1 clusterin associated protein 1 JBrowse link 10 11,847,058 11,878,792 RGD:1624291
RGD:13792537
G Cplane1 ciliogenesis and planar polarity effector 1 JBrowse link 2
2
57,274,175
57,444,373
57,350,003
57,472,465
RGD:1624291
RGD:13792537
G Dcdc2 doublecortin domain containing 2 JBrowse link 17 41,838,201 42,031,265 RGD:1624291
RGD:13792537
RGD:1600115
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:5509786
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:13792537
RGD:1600115
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1624291
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
G Dnmbp dynamin binding protein JBrowse link 1 263,625,503 263,718,784 RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:13792537
G Dync2i1 dynein 2 intermediate chain 1 JBrowse link 6 144,069,077 144,124,975 RGD:1624291
G Dync2i2 dynein 2 intermediate chain 2 JBrowse link 3 8,599,251 8,615,329 RGD:1624291
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:1624291
G Dzip1 DAZ interacting zinc finger protein 1 JBrowse link 15 104,117,551 104,168,574 RGD:1624291
RGD:13792537
G Dzip1-ps1 DAZ interacting protein 1, pseudogene 1 JBrowse link 14 21,876,931 21,878,989 RGD:13792537
G Dzip1l DAZ interacting zinc finger protein 1-like JBrowse link 8 107,875,659 107,916,298 RGD:1600115
RGD:13792537
RGD:1624291
G E2f4 E2F transcription factor 4 JBrowse link 19 37,252,828 37,260,239 RGD:1624291
G Ehd1 EH-domain containing 1 JBrowse link 1 221,644,867 221,667,242 RGD:1624291
RGD:13792537
RGD:1600115
G Ehd2 EH-domain containing 2 JBrowse link 1 77,847,599 77,865,870 RGD:13792537
G Ehd3 EH-domain containing 3 JBrowse link 6 25,076,012 25,102,457 RGD:1600115
RGD:13792537
RGD:1624291
G Ehd4 EH-domain containing 4 JBrowse link 3 111,877,853 111,941,841 RGD:13792537
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:1624291
RGD:1600115
G Fbf1 Fas binding factor 1 JBrowse link 10 104,692,791 104,718,630 RGD:1624291
RGD:13792537
G Fhdc1 FH2 domain containing 1 JBrowse link 2 183,450,608 183,487,820 RGD:1624291
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
G Fnbp1l formin binding protein 1-like JBrowse link 2 226,691,435 226,742,081 RGD:1624291
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1600115
RGD:1624291
G Fuz fuzzy planar cell polarity protein JBrowse link 1 100,891,832 100,896,811 RGD:1600115
RGD:1624291
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 JBrowse link 4 6,297,255 6,330,765 RGD:1600115
G Gmnc geminin coiled-coil domain containing JBrowse link 11 77,237,033 77,247,723 RGD:1624291
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
RGD:1600115
G Hoatz HOATZ cilia and flagella associated protein JBrowse link 8 55,471,705 55,490,973 RGD:1624291
G Hspb11 heat shock protein family B (small), member 11 JBrowse link 5 126,856,128 126,882,913 RGD:1624291
G Hyls1 HYLS1, centriolar and ciliogenesis associated JBrowse link 8 36,763,470 36,772,199 RGD:13792537
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:1624291
RGD:1600115
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
G Ift43 intraflagellar transport 43 JBrowse link 6 109,939,323 110,016,646 RGD:1624291
G Ift46 intraflagellar transport 46 JBrowse link 8 49,075,978 49,097,689 RGD:1624291
RGD:13792537
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:1624291
RGD:13792537
G Ift74 intraflagellar transport 74 JBrowse link 5 113,579,065 113,682,485 RGD:1624291
G Ift80 intraflagellar transport 80 JBrowse link 2 165,506,878 165,600,748 RGD:13792537
RGD:1624291
G Ift81 intraflagellar transport 81 JBrowse link 12 39,420,161 39,507,412 RGD:1600115
RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Intu inturned planar cell polarity protein JBrowse link 2 127,589,325 127,611,705 RGD:1600115
RGD:1624291
G Iqcb1 IQ motif containing B1 JBrowse link 11 66,824,059 66,878,585 RGD:1624291
G Iqub IQ motif and ubiquitin domain containing JBrowse link 4 51,482,169 51,586,881 RGD:1624291
G Kif24 kinesin family member 24 JBrowse link 5 57,778,730 57,845,642 RGD:1624291
G Kif27 kinesin family member 27 JBrowse link 17 6,701,287 6,776,599 RGD:1624291
RGD:1600115
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:1624291
RGD:13792537
G Lama5 laminin subunit alpha 5 JBrowse link 3 175,553,042 175,601,112 RGD:1624291
G LOC100912537 tectonic-3-like JBrowse link 1 259,096,641 259,107,087 RGD:13792537
G LOC108348055 B9 domain-containing protein 1 JBrowse link 10 49,019,745 49,029,851 RGD:1600115
RGD:13792537
G LOC690035 similar to Protein KIAA0586 JBrowse link 6 93,562,775 93,667,857 RGD:1624291
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:13792537
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein JBrowse link 2 44,863,246 44,869,732 RGD:1600115
G Mkks McKusick-Kaufman syndrome JBrowse link 3 129,866,542 129,885,213 RGD:1624291
RGD:13792537
G Mks1 MKS transition zone complex subunit 1 JBrowse link 10 75,149,814 75,160,481 RGD:1624291
RGD:13792537
RGD:1600115
G Nek1 NIMA-related kinase 1 JBrowse link 16 32,321,010 32,439,421 RGD:1624291
G Nme5 NME/NM23 family member 5 JBrowse link 18 27,357,460 27,374,641 RGD:1624291
G Nme8 NME/NM23 family member 8 JBrowse link 17 47,300,932 47,368,543 RGD:1600115
RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1600115
G Nphp3 nephrocystin 3 JBrowse link 8 112,526,553 112,575,745 RGD:1624291
G Nudcd3 NudC domain containing 3 JBrowse link 14 86,326,413 86,333,397 RGD:1624291
G Ocrl OCRL, inositol polyphosphate-5-phosphatase JBrowse link X 134,742,226 134,793,411 RGD:1624291
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 29,562,165 29,602,934 RGD:11535964
RGD:13792537
RGD:1624291
G Onecut1 one cut homeobox 1 JBrowse link 8 81,765,779 81,799,894 RGD:1624291
RGD:1600115
G Onecut2 one cut homeobox 2 JBrowse link 18 59,830,375 59,882,490 RGD:1624291
RGD:1600115
G Parva parvin, alpha JBrowse link 1 177,249,302 177,408,160 RGD:1624291
RGD:13792537
RGD:1600115
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:1624291
RGD:13792537
G Pcnt pericentrin JBrowse link 20 12,943,523 13,038,615 RGD:1624291
G Pibf1 progesterone immunomodulatory binding factor 1 JBrowse link 15 83,494,110 83,663,202 RGD:1624291
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin JBrowse link 9 26,164,969 26,736,704 RGD:1624291
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1624291
G Poc1b POC1 centriolar protein B JBrowse link 7 41,304,119 41,404,360 RGD:1600115
RGD:1624291
G Ptpdc1 protein tyrosine phosphatase domain containing 1 JBrowse link 17 16,333,369 16,381,887 RGD:1624291
RGD:13792537
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 JBrowse link 8 118,628,777 118,651,238 RGD:1600115
RGD:1624291
G Rab17 RAB17, member RAS oncogene family JBrowse link 9 98,118,907 98,131,883 RGD:1624291
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
G Rab23 RAB23, member RAS oncogene family JBrowse link 9 38,469,784 38,496,185 RGD:1624291
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,575 48,650,229 RGD:1624291
G Rab3ip RAB3A interacting protein JBrowse link 7 59,927,486 59,971,518 RGD:1624291
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:1600115
RGD:1624291
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:1624291
G Rabl2 RAB, member of RAS oncogene family like 2 JBrowse link 7 130,556,056 130,564,764 RGD:1624291
G Rfx2 regulatory factor X2 JBrowse link 9 10,216,194 10,283,467 RGD:1600115
RGD:1624291
G Rfx3 regulatory factor X3 JBrowse link 1 245,853,332 246,110,648 RGD:1624291
G Rfx4 regulatory factor X4 JBrowse link 7 25,831,358 25,909,976 RGD:1624291
G RGD1561795 similar to RIKEN cDNA 1700012B09 JBrowse link 8 13,275,270 13,292,587 RGD:1624291
G Rilp Rab interacting lysosomal protein JBrowse link 10 63,658,451 63,662,428 RGD:13792537
G Rilpl1 Rab interacting lysosomal protein-like 1 JBrowse link 12 37,490,320 37,528,393 RGD:13792537
G Rilpl2 Rab interacting lysosomal protein-like 2 JBrowse link 12 37,544,918 37,556,453 RGD:13792537
G Ro60 Ro60, Y RNA binding protein JBrowse link 13 60,546,892 60,567,882 RGD:1624291
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:1624291
G Rpgrip1l Rpgrip1-like JBrowse link 19 17,115,266 17,208,055 RGD:1624291
G Sclt1 sodium channel and clathrin linker 1 JBrowse link 2 128,523,376 128,675,668 RGD:1624291
RGD:1600115
G Septin2 septin 2 JBrowse link 9 100,624,876 100,658,053 RGD:1600115
RGD:13792537
RGD:1624291
G Septin6 septin 6 JBrowse link X 123,524,954 123,601,214 RGD:13792537
G Septin7 septin 7 JBrowse link 8 26,412,910 26,476,615 RGD:1600115
RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:1600115
RGD:1624291
G Snx10 sorting nexin 10 JBrowse link 4 81,311,490 81,375,248 RGD:1624291
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
G Ssx2ip SSX family member 2 interacting protein JBrowse link 2 252,263,323 252,296,049 RGD:1624291
RGD:1600115
G Stk36 serine/threonine kinase 36 JBrowse link 9 81,880,175 81,908,014 RGD:1624291
G Tbc1d32 TBC1 domain family, member 32 JBrowse link 20 37,463,879 37,701,268 RGD:1624291
RGD:13792537
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Tctn1 tectonic family member 1 JBrowse link 12 39,790,948 39,828,215 RGD:1624291
RGD:13792537
G Tctn2 tectonic family member 2 JBrowse link 12 37,400,896 37,427,256 RGD:1600115
RGD:13792537
RGD:1624291
G Tctn3 tectonic family member 3 JBrowse link 1 259,681,435 259,691,881 RGD:1624291
RGD:13792537
G Tekt1 tektin 1 JBrowse link 10 58,895,689 58,924,098 RGD:13792537
G Tekt2 tektin 2 JBrowse link 5 144,341,955 144,345,500 RGD:13792537
G Tekt3 tektin 3 JBrowse link 10 49,472,520 49,506,473 RGD:1624291
RGD:13792537
RGD:1600115
G Tekt4 tektin 4 JBrowse link 10 14,828,642 14,833,818 RGD:13792537
G Tekt5 tektin 5 JBrowse link 10 5,353,007 5,389,684 RGD:13792537
G Tmem107 transmembrane protein 107 JBrowse link 10 55,653,694 55,656,270 RGD:1624291
RGD:1600115
G Tmem138 transmembrane protein 138 JBrowse link 1 226,623,861 226,630,911 RGD:1624291
RGD:1600115
G Tmem17 transmembrane protein 17 JBrowse link 14 107,268,235 107,308,546 RGD:1624291
RGD:1600115
G Tmem216 transmembrane protein 216 JBrowse link 1 226,601,201 226,606,417 RGD:1624291
RGD:1600115
G Tmem231 transmembrane protein 231 JBrowse link 19 44,137,444 44,158,624 RGD:1624291
RGD:13792537
RGD:1600115
G Tmem237 transmembrane protein 237 JBrowse link 9 65,882,063 65,917,424 RGD:1624291
RGD:13792537
G Tmem250 transmembrane protein 250 JBrowse link 3 3,590,783 3,594,475 RGD:13792537
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:8554306
RGD:1624291
RGD:1600115
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 9 98,621,499 98,658,223 RGD:1624291
RGD:13792537
G Ttbk2 tau tubulin kinase 2 JBrowse link 3 112,677,932 112,789,615 RGD:1624291
RGD:13792537
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:1624291
RGD:1600115
G Ttc36 tetratricopeptide repeat domain 36 JBrowse link 8 49,106,374 49,109,981 RGD:13792537
G Ttc39c tetratricopeptide repeat domain 39C JBrowse link 18 3,958,424 4,080,028 RGD:13792537
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:1624291
G Ttll3 tubulin tyrosine ligase like 3 JBrowse link 4 145,341,059 145,366,614 RGD:1624291
G Ttll8 tubulin tyrosine ligase like 8 JBrowse link 7 129,906,998 129,948,578 RGD:1624291
G Txndc15 thioredoxin domain containing 15 JBrowse link 17 9,429,171 9,441,628 RGD:1600115
RGD:13792537
RGD:1624291
G Ubxn10 UBX domain protein 10 JBrowse link 5 157,158,129 157,165,767 RGD:1624291
G Unc119b unc-119 lipid binding chaperone B JBrowse link 12 47,239,663 47,252,286 RGD:1624291
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1624291
RGD:1600115
G Wdr11 WD repeat domain 11 JBrowse link 1 202,770,810 202,816,336 RGD:1624291
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:1624291
RGD:13792537
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
RGD:13792537
RGD:1600115
G Wdr90 WD repeat domain 90 JBrowse link 10 15,211,660 15,229,477 RGD:1624291
RGD:13792537
G Wwtr1 WW domain containing transcription regulator 1 JBrowse link 2 147,577,149 147,693,033 RGD:1624291
G Zfp423 zinc finger protein 423 JBrowse link 19 20,147,201 20,405,999 RGD:1624291
inner dynein arm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
RGD:13792537
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1624291
RGD:13792537
RGD:1600115
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:1600115
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf5 dynein, axonemal, assembly factor 5 JBrowse link 12 17,545,468 17,584,466 RGD:1624291
RGD:13792537
G Dnaaf6 dynein axonemal assembly factor 6 JBrowse link X 111,389,557 111,439,399 RGD:1624291
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
G Dnah7 dynein, axonemal, heavy chain 7 JBrowse link 9
9
60,070,087
59,564,253
60,330,121
59,595,347
RGD:1624291
RGD:1600115
G Dnai3 dynein axonemal intermediate chain 3 JBrowse link 2 251,912,432 251,970,699 RGD:13792537
G Lrrc6 leucine rich repeat containing 6 JBrowse link 7 107,130,402 107,231,507 RGD:1624291
G Tekt2 tektin 2 JBrowse link 5 144,341,955 144,345,500 RGD:1624291
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:1624291
RGD:13792537
intraciliary anterograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:1624291
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:1624291
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:13792537
intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:13792537
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1624291
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:13792537
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift43 intraflagellar transport 43 JBrowse link 6 109,939,323 110,016,646 RGD:1624291
G Ttc21a tetratricopeptide repeat domain 21A JBrowse link 8 128,622,414 128,657,199 RGD:13792537
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:13792537
RGD:1624291
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:1624291
RGD:13792537
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
RGD:13792537
intraciliary transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07063281.1 RGD:13792537
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:1624291
RGD:1600115
G Bbs12 Bardet-Biedl syndrome 12 JBrowse link 2 124,048,513 124,057,026 RGD:1624291
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2i1 dynein 2 intermediate chain 1 JBrowse link 6 144,069,077 144,124,975 RGD:13792537
G Dync2i2 dynein 2 intermediate chain 2 JBrowse link 3 8,599,251 8,615,329 RGD:13792537
G Hspb11 heat shock protein family B (small), member 11 JBrowse link 5 126,856,128 126,882,913 RGD:1600115
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:13792537
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
RGD:13792537
G Ift27 intraflagellar transport 27 JBrowse link 7 119,393,384 119,409,710 RGD:1624291
G Ift46 intraflagellar transport 46 JBrowse link 8 49,075,978 49,097,689 RGD:13792537
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:13792537
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:13792537
G Ift74 intraflagellar transport 74 JBrowse link 5 113,579,065 113,682,485 RGD:13792537
G Ift81 intraflagellar transport 81 JBrowse link 12 39,420,161 39,507,412 RGD:13792537
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:13792537
G Lca5 lebercilin LCA5 JBrowse link 8 90,926,309 90,984,271 RGD:1624291
RGD:1600115
RGD:13792537
G Lca5l lebercilin LCA5 like JBrowse link 11 36,512,823 36,546,806 RGD:13792537
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:13792537
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1624291
G Rabl2 RAB, member of RAS oncogene family like 2 JBrowse link 7 130,556,056 130,564,764 RGD:1624291
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:1624291
G Ssna1 SS nuclear autoantigen 1 JBrowse link 3 2,489,017 2,490,481 RGD:1624291
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 9 98,621,499 98,658,223 RGD:13792537
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:1624291
RGD:1600115
G Ttc30a1 tetratricopeptide repeat domain 30A1 JBrowse link 3 62,800,932 62,803,373 RGD:13792537
G Ttc30b tetratricopeptide repeat domain 30B JBrowse link 3 62,758,754 62,761,325 RGD:13792537
RGD:1600115
G Tub TUB bipartite transcription factor JBrowse link 1 173,550,929 173,629,550 RGD:1624291
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
intraciliary transport involved in cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:1624291
RGD:13792537
RGD:1600115
G Ift74 intraflagellar transport 74 JBrowse link 5 113,579,065 113,682,485 RGD:1624291
RGD:13792537
G Ift81 intraflagellar transport 81 JBrowse link 12 39,420,161 39,507,412 RGD:1600115
RGD:1624291
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:1624291
RGD:13792537
G Ssx2ip SSX family member 2 interacting protein JBrowse link 2 252,263,323 252,296,049 RGD:1624291
RGD:1600115
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:13792537
motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap4 A-kinase anchoring protein 4 JBrowse link X 16,296,027 16,306,078 RGD:1624291
RGD:1600115
G Atmin ATM interactor JBrowse link 19 49,482,482 49,499,682 RGD:1624291
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:1624291
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1624291
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Cenpj centromere protein J JBrowse link 15 36,745,672 36,809,228 RGD:1624291
G Cfap221 cilia and flagella associated protein 221 JBrowse link 13 35,952,808 36,024,371 RGD:1624291
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:1600115
G Dnaaf3 dynein, axonemal, assembly factor 3 JBrowse link 1 72,874,131 72,882,867 RGD:1624291
RGD:1600115
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1624291
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1624291
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:1624291
G Intu inturned planar cell polarity protein JBrowse link 2 127,589,325 127,611,705 RGD:1624291
RGD:1600115
G Jhy junctional cadherin complex regulator JBrowse link 8 45,084,067 45,140,570 RGD:1624291
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:1624291
G Lrrc6 leucine rich repeat containing 6 JBrowse link 7 107,130,402 107,231,507 RGD:1624291
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein JBrowse link 2 44,863,246 44,869,732 RGD:1600115
RGD:1624291
G Mir34b microRNA 34b JBrowse link 8 55,492,542 55,492,625 RGD:1624291
G Mir34c microRNA 34c JBrowse link 8 55,492,024 55,492,100 RGD:1624291
G Mir449a microRNA 449a JBrowse link 2 44,897,601 44,897,691 RGD:1624291
G Mir449c microRNA 449c JBrowse link 2 44,896,066 44,896,164 RGD:1624291
G Mks1 MKS transition zone complex subunit 1 JBrowse link 10 75,149,814 75,160,481 RGD:1624291
RGD:1600115
G Noto notochord homeobox JBrowse link 4 117,206,355 117,210,856 RGD:1624291
G Rsph6a radial spoke head 6 homolog A JBrowse link 1 79,959,555 79,979,217 RGD:1624291
G Rsph9 radial spoke head component 9 JBrowse link 9 17,224,589 17,245,093 RGD:13792537
G Spata6 spermatogenesis associated 6 JBrowse link 5 131,719,922 131,803,853 RGD:1600115
RGD:13792537
RGD:1624291
G Ulk4 unc-51 like kinase 4 JBrowse link 8 129,631,003 129,919,080 RGD:1624291
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:1624291
RGD:13792537
negative regulation of cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccp110 centriolar coiled-coil protein 110 JBrowse link 1 188,417,012 188,444,991 RGD:1624291
G Cdk10 cyclin-dependent kinase 10 JBrowse link 19 56,024,903 56,032,610 RGD:1600115
RGD:1624291
G Cep97 centrosomal protein 97 JBrowse link 11 47,146,409 47,174,460 RGD:1624291
G Evi5l ecotropic viral integration site 5-like JBrowse link 12 2,588,066 2,626,336 RGD:1624291
G Odf2l outer dense fiber of sperm tails 2-like JBrowse link 2 250,995,018 251,032,908 RGD:1624291
G Tbc1d30 TBC1 domain family, member 30 JBrowse link 7 63,361,443 63,409,760 RGD:1624291
G Tbc1d7 TBC1 domain family, member 7 JBrowse link 17 23,774,793 23,792,389 RGD:1624291
G Tchp trichoplein, keratin filament binding JBrowse link 12 47,638,278 47,653,602 RGD:1624291
negative regulation of non-motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:9685166
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:1624291
G Map4 microtubule-associated protein 4 JBrowse link 8 118,013,584 118,159,934 RGD:1624291
non-motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:1624291
G Arl13a ADP ribosylation factor like GTPase 13A JBrowse link X 105,010,943 105,039,720 RGD:13792537
G Arl13b ADP-ribosylation factor like GTPase 13B JBrowse link 7 1,122,567 1,188,209 RGD:1624291
RGD:13792537
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:1624291
RGD:13792537
G Bbs10 Bardet-Biedl syndrome 10 JBrowse link 7 54,030,229 54,034,354 RGD:1624291
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:1624291
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link 2 123,283,402 123,322,991 RGD:1600115
G C2cd3 C2 domain containing 3 centriole elongation regulator JBrowse link 1 165,382,279 165,480,088 RGD:1624291
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:1624291
G Ccdc13 coiled-coil domain containing 13 JBrowse link 8 130,436,529 130,475,521 RGD:1624291
RGD:13792537
G Cenpj centromere protein J JBrowse link 15 36,745,672 36,809,228 RGD:1624291
G Cep126 centrosomal protein 126 JBrowse link 8 6,237,838 6,305,127 RGD:1600115
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Cep250 centrosomal protein 250 JBrowse link 3 151,508,366 151,544,631 RGD:1624291
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:1624291
G Cep350 centrosomal protein 350 JBrowse link 13 73,499,715 73,637,707 RGD:1624291
G Cep89 centrosomal protein 89 JBrowse link 1 91,663,723 91,705,979 RGD:1624291
G Csnk1d casein kinase 1, delta JBrowse link 10 110,147,786 110,182,413 RGD:1624291
RGD:13792537
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:1624291
RGD:1600115
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:1600115
G Fuz fuzzy planar cell polarity protein JBrowse link 1 100,891,832 100,896,811 RGD:1624291
RGD:1600115
G Gfy golgi-associated, olfactory signaling regulator JBrowse link 1 101,172,408 101,177,024 RGD:1624291
G Gorab golgin, RAB6-interacting JBrowse link 13 81,682,207 81,698,827 RGD:1624291
RGD:13792537
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:13792537
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:1624291
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:1624291
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:1624291
RGD:13792537
G Ift74 intraflagellar transport 74 JBrowse link 5 113,579,065 113,682,485 RGD:1624291
G Ift80 intraflagellar transport 80 JBrowse link 2 165,506,878 165,600,748 RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
RGD:13792537
G Intu inturned planar cell polarity protein JBrowse link 2 127,589,325 127,611,705 RGD:1600115
RGD:1624291
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:1624291
G Mapre1 microtubule-associated protein, RP/EB family, member 1 JBrowse link 3 149,221,346 149,249,469 RGD:1624291
G Mkks McKusick-Kaufman syndrome JBrowse link 3 129,866,542 129,885,213 RGD:1624291
G Mks1 MKS transition zone complex subunit 1 JBrowse link 10 75,149,814 75,160,481 RGD:1600115
RGD:1624291
G Nphp3 nephrocystin 3 JBrowse link 8 112,526,553 112,575,745 RGD:1624291
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:1624291
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:1624291
G Pibf1 progesterone immunomodulatory binding factor 1 JBrowse link 15 83,494,110 83,663,202 RGD:1624291
G Poc1a POC1 centriolar protein A JBrowse link 8 114,982,764 115,050,844 RGD:1624291
G Rpgrip1l Rpgrip1-like JBrowse link 19 17,115,266 17,208,055 RGD:1624291
G Spag6l sperm associated antigen 6-like JBrowse link 11 88,424,493 88,517,910 RGD:1624291
G Stil STIL, centriolar assembly protein JBrowse link 5 133,819,302 133,851,362 RGD:1624291
G Tbc1d32 TBC1 domain family, member 32 JBrowse link 20 37,463,879 37,701,268 RGD:1624291
RGD:13792537
G Tmem107 transmembrane protein 107 JBrowse link 10 55,653,694 55,656,270 RGD:1624291
RGD:13792537
G Tmem17 transmembrane protein 17 JBrowse link 14 107,268,235 107,308,546 RGD:1624291
RGD:13792537
G Tmem216 transmembrane protein 216 JBrowse link 1 226,601,201 226,606,417 RGD:13792537
G Tmem80 transmembrane protein 80 JBrowse link 1 214,317,300 214,326,293 RGD:13792537
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:13792537
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link 13 90,379,203 90,405,627 RGD:1624291
outer dynein arm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Armc4 armadillo repeat containing 4 JBrowse link 17 60,283,926 60,474,289 RGD:1624291
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
G Ccdc114 coiled-coil domain containing 114 JBrowse link 1 101,904,042 101,932,999 RGD:1600115
RGD:13792537
RGD:1624291
G Ccdc151 coiled-coil domain containing 151 JBrowse link 8 23,000,912 23,014,707 RGD:1624291
G Ccdc63 coiled-coil domain containing 63 JBrowse link 12 39,905,120 39,950,719 RGD:13792537
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:1600115
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf5 dynein, axonemal, assembly factor 5 JBrowse link 12 17,545,468 17,584,466 RGD:1624291
RGD:13792537
G Dnaaf6 dynein axonemal assembly factor 6 JBrowse link X 111,389,557 111,439,399 RGD:1624291
G Dnah17 dynein, axonemal, heavy chain 17 JBrowse link 10 107,028,115 107,161,288 RGD:1624291
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1624291
G Dnah8 dynein, axonemal, heavy chain 8 JBrowse link 20 9,301,317 9,560,805 RGD:13792537
G Dnai1 dynein, axonemal, intermediate chain 1 JBrowse link 5 57,947,796 58,017,985 RGD:1624291
RGD:13792537
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
RGD:13792537
G Dnal1 dynein, axonemal, light chain 1 JBrowse link 6 107,596,785 107,623,869 RGD:1624291
RGD:13792537
G Lrrc6 leucine rich repeat containing 6 JBrowse link 7 107,130,402 107,231,507 RGD:1624291
G Ttc25 tetratricopeptide repeat domain 25 JBrowse link 10 88,459,490 88,488,237 RGD:1624291
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:1624291
RGD:13792537
positive regulation of cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgap35 Rho GTPase activating protein 35 JBrowse link 1 78,456,409 78,573,374 RGD:1600115
RGD:1624291
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Ccdc88a coiled coil domain containing 88A JBrowse link 14 113,771,093 113,936,376 RGD:1624291
G Ccp110 centriolar coiled-coil protein 110 JBrowse link 1 188,417,012 188,444,991 RGD:1624291
G Cep120 centrosomal protein 120 JBrowse link 18 48,658,495 48,720,570 RGD:1624291
G Crocc ciliary rootlet coiled-coil, rootletin JBrowse link 5 159,540,453 159,583,194 RGD:1624291
G Dzip1 DAZ interacting zinc finger protein 1 JBrowse link 15 104,117,551 104,168,574 RGD:1624291
G Entr1 endosome associated trafficking regulator 1 JBrowse link 3 3,827,498 3,834,219 RGD:1624291
RGD:13792537
G Fuz fuzzy planar cell polarity protein JBrowse link 1 100,891,832 100,896,811 RGD:1624291
RGD:1600115
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1624291
RGD:1600115
G Kctd17 potassium channel tetramerization domain containing 17 JBrowse link 7 119,647,301 119,658,148 RGD:1624291
RGD:13792537
G Mark4 microtubule affinity regulating kinase 4 JBrowse link 1 80,335,517 80,367,366 RGD:1624291
G Mns1 meiosis-specific nuclear structural 1 JBrowse link 8 79,054,240 79,075,119 RGD:1624291
G Saxo1 stabilizer of axonemal microtubules 1 JBrowse link 5 104,771,081 104,921,001 RGD:1624291
G Saxol1 stabilizer of axonemal microtubules like 1 JBrowse link X 29,520,263 29,522,420 RGD:1600115
G Tapt1 transmembrane anterior posterior transformation 1 JBrowse link 14 71,416,153 71,462,646 RGD:1624291
RGD:13792537
positive regulation of motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1624291
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:1624291
positive regulation of non-motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atmin ATM interactor JBrowse link 19 49,482,482 49,499,682 RGD:1624291
G Cenpj centromere protein J JBrowse link 15 36,745,672 36,809,228 RGD:1624291
G Cep135 centrosomal protein 135 JBrowse link 14 34,052,168 34,115,763 RGD:1624291
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1624291
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:1624291
RGD:1600115
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1624291
G Pqbp1 polyglutamine binding protein 1 JBrowse link X 15,448,570 15,453,130 RGD:9685166
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
G Septin7 septin 7 JBrowse link 8 26,412,910 26,476,615 RGD:1624291
G Septin9 septin 9 JBrowse link 10 106,208,308 106,340,747 RGD:1624291
G Septin9 septin 9 RGD:1600115
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:11535947
G Ttbk2 tau tubulin kinase 2 JBrowse link 3 112,677,932 112,789,615 RGD:1624291
G Wrap73 WD repeat containing, antisense to TP73 JBrowse link 5 171,441,471 171,455,795 RGD:1624291
RGD:1600115
regulation of cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 JBrowse link 1 35,067,268 35,200,530 RGD:9685162
G Atg3 autophagy related 3 JBrowse link 11 60,585,192 60,613,706 RGD:1624291
G Atg5 autophagy related 5 JBrowse link 20 49,301,783 49,393,147 RGD:1600115
RGD:1624291
G Ccdc151 coiled-coil domain containing 151 JBrowse link 8 23,000,912 23,014,707 RGD:1624291
G Cdkl1 cyclin dependent kinase like 1 JBrowse link 6 92,076,247 92,123,108 RGD:1600115
G Cdkl5 cyclin-dependent kinase-like 5 JBrowse link X 35,536,396 35,773,204 RGD:1624291
G Cntrob centrobin, centriole duplication and spindle assembly protein JBrowse link 10 55,901,929 55,927,121 RGD:1600115
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
RGD:1624291
G Dcdc2 doublecortin domain containing 2 JBrowse link 17 41,838,201 42,031,265 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:1624291
RGD:1600115
G Evi5 ecotropic viral integration site 5 JBrowse link 14 2,892,738 3,038,237 RGD:1624291
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Mapk15 mitogen-activated protein kinase 15 JBrowse link 7 117,041,287 117,061,799 RGD:1600115
RGD:1624291
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein JBrowse link 2 44,863,246 44,869,732 RGD:1600115
RGD:1624291
G Noto notochord homeobox JBrowse link 4 117,206,355 117,210,856 RGD:1624291
G Odf2 outer dense fiber of sperm tails 2 JBrowse link 3 8,449,733 8,495,764 RGD:1624291
G Rabep2 rabaptin, RAB GTPase binding effector protein 2 JBrowse link 1 197,839,583 197,855,953 RGD:1600115
RGD:1624291
G Rabgap1 RAB GTPase activating protein 1 JBrowse link 3 21,698,032 21,815,383 RGD:1624291
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 JBrowse link 13 94,888,046 95,100,833 RGD:1624291
G Sgsm3 small G protein signaling modulator 3 JBrowse link 7 122,203,498 122,232,993 RGD:1624291
G Syne1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 1
1
41,608,287
41,844,840
41,763,591
42,086,662
RGD:1624291
G Syne2 spectrin repeat containing nuclear envelope protein 2 JBrowse link 6 98,884,269 99,153,551 RGD:1624291
G Tbc1d1 TBC1 domain family member 1 JBrowse link 14 45,598,753 45,797,650 RGD:1624291
G Tbc1d10a TBC1 domain family, member 10a JBrowse link 14 84,417,320 84,445,034 RGD:1624291
G Tbc1d10b TBC1 domain family, member 10b JBrowse link 1 198,641,018 198,652,674 RGD:1624291
G Tbc1d10c TBC1 domain family, member 10C JBrowse link 1 219,431,094 219,439,102 RGD:1624291
G Tbc1d13 TBC1 domain family, member 13 JBrowse link 3 8,701,849 8,718,400 RGD:1624291
G Tbc1d14 TBC1 domain family, member 14 JBrowse link 14 79,172,272 79,438,765 RGD:1624291
G Tbc1d15 TBC1 domain family, member 15 JBrowse link 7 58,164,190 58,219,804 RGD:1624291
G Tbc1d16 TBC1 domain family, member 16 JBrowse link 10 108,257,492 108,321,899 RGD:1624291
G Tbc1d17 TBC1 domain family, member 17 JBrowse link 1 100,836,993 100,845,216 RGD:1624291
G Tbc1d19 TBC1 domain family, member 19 JBrowse link 14 59,403,930 59,516,854 RGD:1624291
G Tbc1d2 TBC1 domain family, member 2 JBrowse link 5 62,213,001 62,261,467 RGD:1624291
G Tbc1d20 TBC1 domain family, member 20 JBrowse link 3 147,772,006 147,790,946 RGD:1624291
G Tbc1d21 TBC1 domain family, member 21 JBrowse link 8 63,138,801 63,150,694 RGD:1624291
G Tbc1d22a TBC1 domain family, member 22a JBrowse link 7 127,081,769 127,227,601 RGD:1624291
G Tbc1d22b TBC1 domain family, member 22B JBrowse link 20 8,216,097 8,278,344 RGD:1624291
G Tbc1d24 TBC1 domain family, member 24 JBrowse link 10 13,551,100 13,576,739 RGD:1624291
G Tbc1d2b TBC1 domain family, member 2B JBrowse link 8 97,577,551 97,647,072 RGD:1624291
G Tbc1d5 TBC1 domain family, member 5 JBrowse link 9 1,144,641 1,747,732 RGD:1624291
G Tbc1d8 TBC1 domain family, member 8 JBrowse link 9 46,090,613 46,206,672 RGD:1624291
G Tbc1d9b TBC1 domain family member 9B JBrowse link 10 35,637,103 35,677,335 RGD:1624291
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Usp6nl USP6 N-terminal like JBrowse link 17 75,759,428 75,887,108 RGD:1624291
G Vdac3 voltage-dependent anion channel 3 JBrowse link 16 74,292,466 74,308,910 RGD:1600115
regulation of intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:1624291
regulation of non-motile cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
sperm axoneme assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Armc2 armadillo repeat containing 2 JBrowse link 20 46,766,467 46,872,009 RGD:1624291
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:1624291
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Cfap157 cilia and flagella associated protein 157 JBrowse link 3 11,813,575 11,820,549 RGD:1624291
RGD:1600115
G Cfap43 cilia and flagella associated protein 43 JBrowse link 1 267,511,359 267,598,642 RGD:1624291
RGD:13792537
G Cfap44 cilia and flagella associated protein 44 JBrowse link 11 61,160,793 61,237,056 RGD:1624291
RGD:13792537
G Cfap65 cilia and flagella associated protein 65 JBrowse link 9 82,163,016 82,197,909 RGD:1624291
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
RGD:1600115
G Fsip2 fibrous sheath-interacting protein 2 JBrowse link 3 70,285,181 70,356,568 RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Iqcg IQ motif containing G JBrowse link 11 70,967,228 71,007,708 RGD:1624291
RGD:13792537
RGD:1600115
G Neurl1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 1 266,953,006 267,038,879 RGD:1624291
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1624291
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
G Spag6l sperm associated antigen 6-like JBrowse link 11 88,424,493 88,517,910 RGD:1624291
G Spef2 sperm flagellar 2 JBrowse link 2 58,901,937 59,084,194 RGD:1624291
RGD:13792537
G Tpgs1 tubulin polyglutamylase complex subunit 1 JBrowse link 7 12,912,251 12,918,173 RGD:1624291
G Ttll1 tubulin tyrosine ligase like 1 JBrowse link 7 124,338,396 124,367,719 RGD:1624291
G Ttll5 tubulin tyrosine ligase like 5 JBrowse link 6 109,693,915 109,910,479 RGD:1624291
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep19 centrosomal protein 19 JBrowse link 11 71,921,713 71,938,335 RGD:1600115
RGD:13792537
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          organelle organization 4011
            cilium organization 381
              ciliary basal body organization 6
              cilium assembly + 353
              cilium disassembly + 1
              intraciliary transport + 42
Path 2
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          cell projection organization 1703
            plasma membrane bounded cell projection organization 1667
              cilium organization 381
                ciliary basal body organization 6
                cilium assembly + 353
                cilium disassembly + 1
                intraciliary transport + 42
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.