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ONTOLOGY REPORT - ANNOTATIONS


Term:cell cycle DNA replication
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Accession:GO:0044786 term browser browse the term
Definition:The DNA-dependent DNA replication that takes place as part of the cell cycle.


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DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zpr1 ZPR1 zinc finger JBrowse link 8 50,563,047 50,572,621 RGD:1624291
DNA replication preinitiation complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdt1 chromatin licensing and DNA replication factor 1 JBrowse link 19 55,381,565 55,386,511 RGD:1624291
RGD:13792537
G Gmnn geminin, DNA replication inhibitor JBrowse link 17 42,302,523 42,310,783 RGD:1624291
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gins1 GINS complex subunit 1 JBrowse link 3 146,695,366 146,716,787 RGD:13792537
mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcm6 minichromosome maintenance complex component 6 JBrowse link 13 45,042,882 45,068,073 RGD:13792537
mitotic DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 4 120,825,699 120,840,221 RGD:13792537
G Mcm3 minichromosome maintenance complex component 3 JBrowse link 9 26,914,057 26,932,201 RGD:13792537
G Mcm4 minichromosome maintenance complex component 4 JBrowse link 11 89,511,191 89,524,892 RGD:13792537
G Pola1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 62,382,604 62,698,830 RGD:13792537
mitotic DNA replication preinitiation complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc45 cell division cycle 45 JBrowse link 11 86,328,785 86,354,099 RGD:13792537
mitotic DNA replication termination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtfdc1 replication termination factor 2 domain containing 1 JBrowse link 3 170,443,895 170,473,456 RGD:1600115
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1624291
RGD:1600115
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:1600115
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:1624291
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 3 176,818,012 176,856,531 RGD:1624291
negative regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo5 F-box protein 5 JBrowse link 1 42,461,277 42,467,646 RGD:1624291
nuclear DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atad5 ATPase family, AAA domain containing 5 JBrowse link 10 67,427,042 67,475,825 RGD:1624291
G Donson downstream neighbor of SON JBrowse link 11 31,834,608 31,847,751 RGD:13792537
G Zfp830 zinc finger protein 830 JBrowse link 10 70,118,250 70,119,714 RGD:1624291
RGD:13792537
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lig1 DNA ligase 1 JBrowse link 1 75,356,212 75,394,757 RGD:13792537
G LOC100911727 DNA ligase 1-like JBrowse link 1 75,224,143 75,264,441 RGD:13792537
positive regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G E2f7 E2F transcription factor 7 JBrowse link 7 53,275,659 53,318,261 RGD:1624291
RGD:1600115
G E2f8 E2F transcription factor 8 JBrowse link 1 104,185,436 104,203,683 RGD:1600115
RGD:1624291
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:1624291
RGD:1600115
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:1600115
RGD:1624291
G Cdc7 cell division cycle 7 JBrowse link 14 3,826,658 3,846,891 RGD:1624291
G Dbf4 DBF4 zinc finger JBrowse link 4 22,898,527 22,914,091 RGD:13792537
G Dbf4b DBF4 zinc finger B JBrowse link 10 90,710,468 90,723,313 RGD:1624291
G Ino80 INO80 complex ATPase subunit JBrowse link 3 111,186,371 111,266,542 RGD:1624291
G Wiz WIZ zinc finger JBrowse link 7 14,374,358 14,402,647 RGD:1624291
pre-replicative complex assembly involved in nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 4 120,825,699 120,840,221 RGD:13792537
G Mcm3 minichromosome maintenance complex component 3 JBrowse link 9 26,914,057 26,932,201 RGD:13792537
G Mcm4 minichromosome maintenance complex component 4 JBrowse link 11 89,511,191 89,524,892 RGD:13792537
G Mcm5 minichromosome maintenance complex component 5 JBrowse link 19 14,523,482 14,561,281 RGD:13792537
G Mcm6 minichromosome maintenance complex component 6 JBrowse link 13 45,042,882 45,068,073 RGD:13792537
G Mcm7 minichromosome maintenance complex component 7 JBrowse link 12 19,306,615 19,313,877 RGD:13792537
G Orc3 origin recognition complex, subunit 3 JBrowse link 5 50,019,159 50,075,533 RGD:13792537
regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Senp2 SUMO specific peptidase 2 JBrowse link 11 82,627,973 82,664,702 RGD:1624291
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zmpste24 zinc metallopeptidase STE24 JBrowse link 5 139,982,404 140,015,541 RGD:1624291
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:1624291
G Cdt1 chromatin licensing and DNA replication factor 1 JBrowse link 19 55,381,565 55,386,511 RGD:1624291
G Dach1 dachshund family transcription factor 1 JBrowse link 15 82,095,003 82,482,272 RGD:1624291
G Ilkap ILK associated serine/threonine phosphatase JBrowse link 9 98,514,599 98,536,586 RGD:632254
G Nuggc nuclear GTPase, germinal center associated JBrowse link 15 49,011,951 49,055,246 RGD:1624291
signal transduction involved in intra-S DNA damage checkpoint term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:1624291
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upf1 UPF1, RNA helicase and ATPase JBrowse link 16 20,824,888 20,845,632 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    cellular process 17238
      cell cycle process 1187
        cell cycle DNA replication 41
          DNA endoreduplication + 5
          DNA strand elongation involved in cell cycle DNA replication + 1
          bacterial-type DNA replication + 0
          cell cycle DNA replication DNA ligation + 0
          cell cycle DNA replication DNA unwinding + 0
          cell cycle DNA replication initiation + 4
          cell cycle DNA replication maintenance of fidelity + 2
          cell cycle DNA replication termination + 1
          nuclear DNA replication + 36
          pre-replicative complex assembly involved in cell cycle DNA replication + 7
          synthesis of RNA primer involved in cell cycle DNA replication + 0
Path 2
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      organic substance metabolic process 10949
        macromolecule metabolic process 9418
          cellular macromolecule metabolic process 8127
            cellular macromolecule biosynthetic process 4773
              DNA replication 241
                DNA-dependent DNA replication 140
                  cell cycle DNA replication 41
                    DNA endoreduplication + 5
                    DNA strand elongation involved in cell cycle DNA replication + 1
                    bacterial-type DNA replication + 0
                    cell cycle DNA replication DNA ligation + 0
                    cell cycle DNA replication DNA unwinding + 0
                    cell cycle DNA replication initiation + 4
                    cell cycle DNA replication maintenance of fidelity + 2
                    cell cycle DNA replication termination + 1
                    nuclear DNA replication + 36
                    pre-replicative complex assembly involved in cell cycle DNA replication + 7
                    synthesis of RNA primer involved in cell cycle DNA replication + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.