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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation by host of viral process
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Accession:GO:0044793 term browser browse the term
Definition:A process in which a host organism stops, prevents or reduces the frequency, rate or extent of a process being mediated by a virus with which it is infected.


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negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:MGI:2180785|MGI:MGI:3053078 (MGI:MGI:1098064|PMID:9343248), (MGI:MGI:2148352|PMID:11483763), (MGI:MGI:3848729|PMID:19358828) RGD PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Crp C-reactive protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Ltf lactotransferrin ISO (PMID:12522210) RGD PMID:12522210 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mptx1 mucosal pentraxin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,772,927...91,827,231
Ensembl chr13:91,773,004...91,776,397
JBrowse link
G Ptx3 pentraxin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 IEA
ISO
GO_REF:0000107
(PMID:2194290), (PMID:8419915)
Ensembl
RGD
PMID:2194290, PMID:8419915 GO_REF:0000107 NCBI chr 3:79,876,938...79,882,319
Ensembl chr 3:79,876,938...79,882,319
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462
JBrowse link
G Ccnk cyclin K ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:MGI:3053078 (MGI:MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:MGI:55926 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO
ISS
(MGI:MGI:5700304|PMID:16601681)
GO_REF:0000024
RGD
UniProt
PMID:16601681 GO_REF:0000024, MGI:MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) RGD PMID:25244949 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO
IEA
(PMID:23544079)
GO_REF:0000107
RGD
Ensembl
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    negative regulation of biological process 5686
      negative regulation of viral process 116
        negative regulation by host of viral process 16
          modulation by host of viral transcription + 2
          negative regulation by host of viral genome replication 9
          negative regulation by host of viral glycoprotein metabolic process 2
          negative regulation by host of viral release from host cell 1
Path 2
Term Annotations click to browse term
  biological_process 20027
    interspecies interaction between organisms 1917
      symbiotic process 400
        viral process 334
          regulation of viral process 213
            negative regulation of viral process 116
              negative regulation by host of viral process 16
                modulation by host of viral transcription + 2
                negative regulation by host of viral genome replication 9
                negative regulation by host of viral glycoprotein metabolic process 2
                negative regulation by host of viral release from host cell 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.