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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma membrane raft
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Accession:GO:0044853 term browser browse the term
Definition:A membrane raft that is part of the plasma membrane.


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plasma membrane raft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy8 adenylate cyclase 8 JBrowse link 7 105,353,883 105,593,372 RGD:13800548
G Add1 adducin 1 JBrowse link 14 81,367,466 81,426,610 RGD:13792537
G Add2 adducin 2 JBrowse link 4 117,691,294 117,887,556 RGD:1600115
RGD:13792537
RGD:1624291
G Add3 adducin 3 JBrowse link 1 273,854,195 273,961,982 RGD:13792537
G Cd177 CD177 molecule JBrowse link 1 82,964,683 82,987,306 RGD:1624291
G Cd8a CD8a molecule JBrowse link 4 99,217,640 99,243,352 RGD:1624291
RGD:1600115
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:1600115
RGD:1624291
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit JBrowse link 8 59,594,007 59,607,122 RGD:12790638
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:12790638
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:12790638
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11541063
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:1624291
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:1624291
RGD:1600115
G Itgad integrin subunit alpha D JBrowse link 1 199,595,968 199,623,931 RGD:1600115
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:1624291
RGD:1600115
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:1624291
RGD:1600115
G Kcnd2 potassium voltage-gated channel subfamily D member 2 JBrowse link 4 48,309,283 48,816,804 RGD:10047216
G Lcp2 lymphocyte cytosolic protein 2 JBrowse link 10 18,996,523 19,043,289 RGD:1624291
RGD:1600115
G Lrp4 LDL receptor related protein 4 JBrowse link 3 80,362,643 80,416,684 RGD:8553452
G Mal mal, T-cell differentiation protein JBrowse link 3 120,209,647 120,233,655 RGD:1600115
RGD:1624291
G Ms4a1 membrane spanning 4-domains A1 JBrowse link 1 227,429,241 227,441,492 RGD:1600115
RGD:1624291
G Myo1a myosin IA JBrowse link 7 71,000,299 71,019,386 RGD:1600115
RGD:1624291
G Myo1d myosin ID JBrowse link 10 67,866,939 68,142,864 RGD:10047169
G Orai1 ORAI calcium release-activated calcium modulator 1 JBrowse link 12 38,981,903 38,995,570 RGD:1600115
RGD:1624291
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:1624291
RGD:1600115
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1600115
RGD:1624291
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:1624291
RGD:1600115
G Selplg selectin P ligand JBrowse link 12 48,577,905 48,579,196 RGD:1624291
G Siglec1 sialic acid binding Ig like lectin 1 JBrowse link 3 123,612,067 123,631,718 RGD:1624291
G Skap1 src kinase associated phosphoprotein 1 JBrowse link 10 84,309,379 84,619,051 RGD:1600115
RGD:1624291
G Slc5a7 solute carrier family 5 member 7 JBrowse link 9 5,294,377 5,330,822 RGD:9999385
G Stim1 stromal interaction molecule 1 JBrowse link 1 167,373,894 167,533,412 RGD:1600115
RGD:1624291
caveola term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy8 adenylate cyclase 8 JBrowse link 7 105,353,883 105,593,372 RGD:13800535
G Adcyap1r1 ADCYAP receptor type I JBrowse link 4 85,662,809 85,711,696 RGD:2315969
G Adra1a adrenoceptor alpha 1A JBrowse link 15 43,296,997 43,398,314 RGD:1600115
G Adra1b adrenoceptor alpha 1B JBrowse link 10 29,392,762 29,450,644 RGD:1600115
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:632158
RGD:1598749
G Adtrp androgen-dependent TFPI-regulating protein JBrowse link 17 22,619,913 22,688,296 RGD:1600115
RGD:1624291
G Akap6 A-kinase anchoring protein 6 JBrowse link 6 73,553,111 73,991,992 RGD:6902941
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link 4 85,551,503 85,563,683 RGD:1624291
RGD:1600115
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:1600115
RGD:1624291
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 2 204,003,742 204,032,023 RGD:2302992
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 JBrowse link 13 90,651,682 90,676,629 RGD:2302992
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link 13 82,737,161 82,757,681 RGD:2302992
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 8 104,190,032 104,221,342 RGD:2302992
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link 16 10,758,278 10,852,170 RGD:1624291
RGD:1600115
G Bmpr2 bone morphogenetic protein receptor type 2 JBrowse link 9 66,568,074 66,683,019 RGD:5129481
RGD:1624291
G Bves blood vessel epicardial substance JBrowse link 20 50,439,885 50,474,678 RGD:1624291
RGD:1600115
G Cacna1h calcium voltage-gated channel subunit alpha1 H JBrowse link 10 14,730,932 14,789,201 RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1582162
RGD:13792537
RGD:1624291
RGD:1600115
RGD:8554773
RGD:2326037
RGD:1601538
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:2300100
RGD:1624291
RGD:13792537
RGD:8554259
RGD:2302992
G Cav3 caveolin 3 JBrowse link 4 144,382,945 144,398,919 RGD:1599532
RGD:13792537
RGD:1624291
RGD:8553487
RGD:8554773
RGD:8554071
RGD:8553403
RGD:2302992
RGD:1600265
RGD:1582162
RGD:1599539
G Cavin1 caveolae associated protein 1 JBrowse link 10 88,862,513 88,874,495 RGD:8553547
RGD:13792537
RGD:1624291
RGD:1600115
G Cavin2 caveolae associated protein 2 JBrowse link 9 55,244,136 55,256,153 RGD:1624291
RGD:13792537
RGD:1600115
G Cavin3 caveolae associated protein 3 JBrowse link 1 170,317,099 170,318,688 RGD:1624291
RGD:13792537
RGD:1600115
G Cavin4 caveolae associated protein 4 JBrowse link 5 64,413,005 64,420,849 RGD:12907554
RGD:1624291
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1598389
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
RGD:1600115
G Cdh15 cadherin 15 JBrowse link 19 55,669,661 55,689,986 RGD:1624291
RGD:1600115
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1624291
RGD:1600115
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1599532
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1600115
RGD:1624291
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1581385
G Efna5 ephrin A5 JBrowse link 9 110,054,002 110,329,878 RGD:1600115
G Ehd2 EH-domain containing 2 JBrowse link 1 77,847,599 77,865,870 RGD:1624291
RGD:1600115
G Emp2 epithelial membrane protein 2 JBrowse link 10 5,433,248 5,467,840 RGD:1624291
RGD:1600115
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 9 75,021,790 76,178,936 RGD:2290016
G F2r coagulation factor II (thrombin) receptor JBrowse link 2 26,118,760 26,135,340 RGD:1624291
RGD:1600115
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:1358613
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:70739
RGD:1624291
RGD:8554071
G Flot2 flotillin 2 JBrowse link 10 65,304,901 65,329,332 RGD:70739
RGD:1624291
G Fxyd1 FXYD domain-containing ion transport regulator 1 JBrowse link 1 89,484,197 89,488,279 RGD:9685469
G Gnaq G protein subunit alpha q JBrowse link 1 233,382,778 233,622,584 RGD:1598488
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:1582266
G Hck HCK proto-oncogene, Src family tyrosine kinase JBrowse link 3 148,579,917 148,623,026 RGD:1624291
RGD:1600115
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:1601538
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1547877
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:1600115
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:2311510
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Irs1 insulin receptor substrate 1 JBrowse link 9 88,033,668 88,086,488 RGD:1624291
RGD:1600115
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:1624291
G Kcnd2 potassium voltage-gated channel subfamily D member 2 JBrowse link 4 48,309,283 48,816,804 RGD:6902941
G Kcnd3 potassium voltage-gated channel subfamily D member 3 JBrowse link 2 207,923,775 208,140,727 RGD:6902941
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 JBrowse link 15 344,204 1,048,849 RGD:1624291
RGD:1600115
G Kif18a kinesin family member 18A JBrowse link 3 100,366,168 100,426,867 RGD:1624291
RGD:1600115
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1298981
G Lipe lipase E, hormone sensitive type JBrowse link 1 82,248,031 82,266,727 RGD:8553552
G Lrp6 LDL receptor related protein 6 JBrowse link 4 168,194,054 168,323,962 RGD:1624291
RGD:13792537
G Lrp8 LDL receptor related protein 8 JBrowse link 5 127,404,348 127,476,636 RGD:1624291
RGD:1600115
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:8553538
RGD:12907554
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:8553538
RGD:12907554
G Mlc1 modulator of VRAC current 1 JBrowse link 7 129,949,984 129,970,314 RGD:2326037
G Myof myoferlin JBrowse link 1 256,585,410 256,734,727 RGD:1624291
RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1624291
RGD:1600115
G Nos1ap nitric oxide synthase 1 adaptor protein JBrowse link 13 88,653,123 88,943,976 RGD:1624291
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:1600115
RGD:1624291
RGD:13504719
G P2ry12 purinergic receptor P2Y12 JBrowse link 2 149,440,807 149,482,592 RGD:6480539
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 JBrowse link 7 124,224,210 124,317,407 RGD:1624291
RGD:1600115
G Pld2 phospholipase D2 JBrowse link 10 57,161,921 57,181,148 RGD:2299914
G Plvap plasmalemma vesicle associated protein JBrowse link 16 19,906,354 19,918,668 RGD:633737
RGD:1624291
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:1624291
RGD:1600115
G Ptgis prostaglandin I2 synthase JBrowse link 3 163,950,746 163,986,129 RGD:1624291
RGD:1600115
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:1600265
G Rangrf RAN guanine nucleotide release factor JBrowse link 10 55,559,049 55,560,420 RGD:1624291
RGD:1600115
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
G Scn5a sodium voltage-gated channel alpha subunit 5 JBrowse link 8 128,169,191 128,266,681 RGD:1624291
RGD:1600115
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:1624291
RGD:1600115
G Slc22a6 solute carrier family 22 member 6 JBrowse link 1 224,824,809 224,833,284 RGD:2300100
G Slc27a1 solute carrier family 27 member 1 JBrowse link 16 19,997,823 20,016,193 RGD:1642797
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:1601538
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:1601538
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1624291
RGD:1600115
G Smpd2 sphingomyelin phosphodiesterase 2 JBrowse link 20 46,212,070 46,215,183 RGD:1581395
RGD:13792537
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:2325013
RGD:1624291
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:1624291
RGD:1600115
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:8554114
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:1624291
RGD:8554114
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 JBrowse link 2 143,433,102 143,605,757 RGD:1624291
RGD:1600115
G Tsc2 TSC complex subunit 2 JBrowse link 10 13,962,006 13,996,684 RGD:1580491
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:8158089
caveola neck term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:1600115
caveolar macromolecular signaling complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1600115
RGD:1624291
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1600115
RGD:1624291
flotillin complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbl Cbl proto-oncogene JBrowse link 8 48,481,256 48,564,775 RGD:1624291
RGD:1600115
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:1624291
RGD:13792537
G Coro1c coronin 1C JBrowse link 12 48,481,741 48,554,054 RGD:1624291
RGD:1600115
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Ctnnd1 catenin delta 1 JBrowse link 3 72,001,904 72,053,047 RGD:1624291
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:70739
RGD:1624291
G Flot2 flotillin 2 JBrowse link 10 65,304,901 65,329,332 RGD:70739
RGD:1624291
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19644
    cellular anatomical entity 19270
      membrane 9884
        plasma membrane region 1273
          plasma membrane raft 130
            caveola + 99
            eisosome membrane domain/MCC 0
Path 2
Term Annotations click to browse term
  cellular_component 19644
    cellular anatomical entity 19270
      membrane 9884
        whole membrane 1298
          membrane region 419
            membrane microdomain 404
              membrane raft 403
                plasma membrane raft 130
                  caveola + 99
                  eisosome membrane domain/MCC 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.