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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of innate immune response
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Accession:GO:0045089 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.
Synonyms:exact_synonym: up regulation of innate immune response;   upregulation of innate immune response
 narrow_synonym: stimulation of innate immune response


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positive regulation of innate immune response term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07009373.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:94,902,666...94,903,226 JBrowse link
G AABR07015743.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:73,674,753...73,675,382 JBrowse link
G AABR07019870.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:5,480,150...5,480,629 JBrowse link
G AABR07025074.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:27,472,051...27,472,687 JBrowse link
G AABR07029613.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:40,994,237...40,994,872 JBrowse link
G AABR07030543.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:92,769,031...92,771,911 JBrowse link
G AABR07035218.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:7,081,895...7,094,002 JBrowse link
G AABR07040430.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:100,206,243...100,207,974 JBrowse link
G AABR07040480.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:102,031,984...102,039,530 JBrowse link
G AABR07041586.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:134,020,900...134,021,502 JBrowse link
G AABR07054355.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,741,312...149,741,953 JBrowse link
G AABR07054358.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,790,856...149,791,497 JBrowse link
G AABR07060165.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:60,547,401...60,548,021 JBrowse link
G AABR07060287.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:66,091,641...66,092,259 JBrowse link
G AABR07067274.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:37,593,032...37,593,603 JBrowse link
G AC094217.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:31,436,712...31,437,203 JBrowse link
G AC108595.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:132,983,472...132,984,110 JBrowse link
G Adam8 ADAM metallopeptidase domain 8 ISO (MGI:MGI:5009349|PMID:20683884) RGD PMID:20683884 MGI:MGI:5009349 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Card9 caspase recruitment domain family, member 9 ISO MGI:MGI:3698412 (MGI:MGI:3697751|PMID:17187069) RGD PMID:17187069 MGI:MGI:3697751 NCBI chr 3:3,798,346...3,806,841
Ensembl chr 3:3,798,347...3,806,713
JBrowse link
G Coch cochlin ISO MGI:MGI:3624560 (MGI:MGI:5525040|PMID:23684986) RGD PMID:23684986 MGI:MGI:5525040 NCBI chr 6:72,359,702...72,373,710
Ensembl chr 6:72,359,791...72,373,695
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (MGI:MGI:5908739|PMID:28636595) RGD PMID:28636595 MGI:MGI:5908739 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Ereg epiregulin ISO
ISS
(MGI:MGI:3604223|PMID:16182244)
GO_REF:0000024
RGD
UniProt
PMID:16182244 GO_REF:0000024, MGI:MGI:3604223 NCBI chr14:18,577,620...18,591,395
Ensembl chr14:18,576,355...18,591,394
JBrowse link
G Fpr2 formyl peptide receptor 2 ISO (PMID:25505240) RGD PMID:25505240 NCBI chr 1:59,800,558...59,809,507
Ensembl chr 1:59,800,984...59,802,401
JBrowse link
G Gbp5 guanylate binding protein 5 ISO (MGI:MGI:5319585|PMID:22461501) RGD PMID:22461501 MGI:MGI:5319585 NCBI chr 2:248,178,441...248,196,873
Ensembl chr 2:248,178,389...248,197,160
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO UniProtKB:O08573 (MGI:MGI:4839671|PMID:20937702) RGD PMID:20937702 MGI:MGI:4839671 NCBI chr10:31,561,838...31,590,624
Ensembl chr10:31,561,895...31,588,943
JBrowse link
G Hmg1l1 high-mobility group (nonhistone chromosomal) protein 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:59,984,234...59,985,494
Ensembl chr19:59,984,234...59,985,494
JBrowse link
G Hmgb1 high mobility group box 1 IBA
ISO
PMID:21873635
(MGI:MGI:4367121|PMID:19890330)
RGD PMID:19890330, PMID:21873635 MGI:MGI:4367121, RGD:13792537 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb1-ps3 high mobility group box 1, pseudogene 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,982,959...132,984,167 JBrowse link
G Hmgb2 high mobility group box 2 ISO
IBA
(MGI:MGI:4367121|PMID:19890330)
PMID:21873635
RGD PMID:19890330, PMID:21873635 MGI:MGI:4367121, RGD:13792537 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb3 high mobility group box 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:36,690,190...36,694,329
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G Hmgb4 high-mobility group box 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,445,545...146,446,227
Ensembl chr 5:146,445,545...146,446,227
JBrowse link
G Lgals9 galectin 9 ISO UniProtKB:Q8VIM0 (MGI:MGI:4839671|PMID:20937702) RGD PMID:20937702 MGI:MGI:4839671 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G LOC100911637 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,741,055...149,741,953 JBrowse link
G LOC102548927 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:53,234,043...53,235,377
Ensembl chr  X:53,233,469...53,235,286
JBrowse link
G LOC103694516 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:134,389,281...134,389,978
Ensembl chr  X:134,389,417...134,389,911
JBrowse link
G LOC103694517 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:139,329,414...139,330,120
Ensembl chr  X:139,329,481...139,329,975
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,351,012...115,351,755
Ensembl chr  X:115,351,114...115,351,755
JBrowse link
G LOC108349258 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:142,344,626...142,345,439
Ensembl chr  X:142,344,878...142,345,372
JBrowse link
G LOC108350839 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:92,431,517...92,432,354
Ensembl chr 4:92,431,710...92,432,354
JBrowse link
G LOC681067 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:132,424,185...132,424,955
Ensembl chr  X:132,424,240...132,424,746
JBrowse link
G LOC688583 similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:51,458,436...51,462,755
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G LOC690521 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,790,599...149,791,497 JBrowse link
G LOC691030 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:130,794,079...130,794,824
Ensembl chr  X:130,794,167...130,794,673
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO (MGI:MGI:5435352|PMID:22509276) RGD PMID:22509276 MGI:MGI:5435352 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:3529594 (MGI:MGI:3528786|PMID:15692051), (MGI:MGI:4946442|PMID:21156799) RGD PMID:15692051, PMID:21156799 MGI:MGI:3528786, MGI:MGI:4946442 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Plscr1 phospholipid scramblase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5284800|PMID:15308695)
(PMID:15308695)
Ensembl
UniProt
RGD
PMID:15308695 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5284800 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Polr3b RNA polymerase III subunit B ISO (PMID:19609254) RGD PMID:19609254 NCBI chr 7:24,745,051...24,851,227
Ensembl chr 7:24,745,051...24,851,227
JBrowse link
G Polr3c RNA polymerase III subunit C ISO
ISS
(PMID:19609254)
GO_REF:0000024
RGD
UniProt
PMID:19609254 GO_REF:0000024 NCBI chr 2:198,836,282...198,852,368
Ensembl chr 2:198,836,285...198,852,161
JBrowse link
G Polr3d RNA polymerase III subunit D ISO (PMID:19631370) RGD PMID:19631370 NCBI chr15:52,129,471...52,134,140
Ensembl chr15:52,129,471...52,134,140
JBrowse link
G Polr3f RNA polymerase III subunit F ISO (PMID:19631370) RGD PMID:19631370 NCBI chr 3:138,684,685...138,701,055
Ensembl chr 3:138,684,685...138,701,055
JBrowse link
G Polr3g RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) RGD PMID:19609254, PMID:19631370 NCBI chr 2:9,537,642...9,578,551
Ensembl chr 2:9,537,642...9,578,310
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:20,416,735...20,417,959
Ensembl chr 1:20,417,008...20,417,637
JBrowse link
G RGD1560585 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:144,001,166...144,001,891
Ensembl chr  X:144,001,233...144,001,727
JBrowse link
G RGD1561558 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:158,261,123...158,261,953
Ensembl chr  X:158,261,223...158,261,717
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:73,674,647...73,675,638 JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,994,237...40,994,990 JBrowse link
G RGD1565762 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:5,480,069...5,480,782 JBrowse link
G RGD1566225 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:137,197,195...137,197,990
Ensembl chr  X:137,197,396...137,197,902
JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:24807708) RGD PMID:24807708 NCBI chr18:3,565,166...3,590,739
Ensembl chr18:3,565,166...3,590,739
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO
IEA
ISS
(PMID:32433612)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32433612 GO_REF:0000024, GO_REF:0000107 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO (MGI:MGI:5287349|PMID:21531336) RGD PMID:21531336 MGI:MGI:5287349 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO
IEA
(PMID:32433612)
GO_REF:0000107
RGD
Ensembl
PMID:32433612 GO_REF:0000107 NCBI chr  X:54,390,733...54,409,466
Ensembl chr  X:54,390,733...54,409,466
JBrowse link
G Tirap TIR domain containing adaptor protein ISO (MGI:MGI:3713420|PMID:16301656) RGD PMID:16301656 MGI:MGI:3713420 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Tlr8 toll-like receptor 8 ISO (PMID:16123302) RGD PMID:16123302 NCBI chr  X:28,539,158...28,562,803
Ensembl chr  X:28,539,158...28,562,803
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:14,713,935...14,725,945
Ensembl chr 9:14,713,935...14,724,093
JBrowse link
activation of innate immune response term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07009373.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:94,902,666...94,903,226 JBrowse link
G AABR07019870.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:5,480,150...5,480,629 JBrowse link
G AABR07025074.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:27,472,051...27,472,687 JBrowse link
G AABR07029613.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:40,994,237...40,994,872 JBrowse link
G AABR07035218.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:7,081,895...7,094,002 JBrowse link
G AABR07054355.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,741,312...149,741,953 JBrowse link
G AABR07054358.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,790,856...149,791,497 JBrowse link
G AABR07060165.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:60,547,401...60,548,021 JBrowse link
G AABR07060287.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:66,091,641...66,092,259 JBrowse link
G AABR07067274.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:37,593,032...37,593,603 JBrowse link
G AC094217.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:31,436,712...31,437,203 JBrowse link
G AC108595.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:132,983,472...132,984,110 JBrowse link
G Aim2 absent in melanoma 2 ISO
IBA
(MGI:MGI:3839523|PMID:19158676)
PMID:21873635
(PMID:19158675), (PMID:19158676), (PMID:19158679)
RGD PMID:19158675, PMID:19158676, PMID:19158679, PMID:21873635 MGI:MGI:3839523, RGD:13792537 NCBI chr13:91,919,834...91,963,080
Ensembl chr13:91,954,138...91,962,588
JBrowse link
G Cgas cyclic GMP-AMP synthase ISO
IBA
(MGI:MGI:5487472|PMID:23258413), (MGI:MGI:5505711|PMID:23929945), (MGI:MGI:5908326|PMID:24077100)
PMID:21873635
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:30007416)
RGD PMID:23258413, PMID:23929945, PMID:24077100, PMID:26046437, PMID:28363908, PMID:30007416, PMID:21873635 MGI:MGI:5487472, MGI:MGI:5505711, MGI:MGI:5908326, RGD:13792537 NCBI chr 8:85,789,515...85,804,008
Ensembl chr 8:85,789,763...85,803,433
JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 ISO (PMID:28712728) RGD PMID:28712728 NCBI chr10:91,200,874...91,202,986
Ensembl chr10:91,200,874...91,202,984
JBrowse link
G Hmg1l1 high-mobility group (nonhistone chromosomal) protein 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:59,984,234...59,985,494
Ensembl chr19:59,984,234...59,985,494
JBrowse link
G Hmgb1 high mobility group box 1 ISO
IBA
(PMID:24971542)
PMID:21873635
RGD PMID:24971542, PMID:21873635 RGD:13792537 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb1-ps3 high mobility group box 1, pseudogene 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,982,959...132,984,167 JBrowse link
G LOC100911637 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,741,055...149,741,953 JBrowse link
G LOC102556096 pyrin domain-containing protein 3-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:91,977,441...91,981,426
Ensembl chr13:91,980,114...91,981,432
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,351,012...115,351,755
Ensembl chr  X:115,351,114...115,351,755
JBrowse link
G LOC108350839 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:92,431,517...92,432,354
Ensembl chr 4:92,431,710...92,432,354
JBrowse link
G LOC690521 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,790,599...149,791,497 JBrowse link
G Matr3 matrin 3 ISO (PMID:28712728) RGD PMID:28712728 NCBI chr18:28,351,691...28,390,764
Ensembl chr18:28,361,283...28,390,717
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:18818105) RGD PMID:18818105 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,073,664...92,091,335
Ensembl chr13:92,073,668...92,089,980
JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 ISO
ISS
(MGI:MGI:3662990|PMID:16648852)
GO_REF:0000024
RGD
UniProt
PMID:16648852 GO_REF:0000024, MGI:MGI:3662990 NCBI chr 6:22,167,874...22,194,755
Ensembl chr 6:22,167,919...22,194,250
JBrowse link
G Nono non-POU domain containing, octamer-binding ISO (PMID:28712728) RGD PMID:28712728 NCBI chr  X:71,324,365...71,342,225
Ensembl chr  X:71,324,365...71,342,225
JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO
IEA
ISS
(PMID:26046437)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26046437 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:15,448,570...15,453,130
Ensembl chr  X:15,348,138...15,453,130
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (PMID:28712728) RGD PMID:28712728 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Pspc1 paraspeckle component 1 ISO (PMID:28712728) RGD PMID:28712728 NCBI chr15:36,946,914...37,030,273
Ensembl chr15:36,950,257...37,030,281
JBrowse link
G Pycard PYD and CARD domain containing ISO (PMID:21575908)
(MGI:MGI:3839029|PMID:19158675)
RGD PMID:19158675, PMID:21575908 MGI:MGI:3839029 NCBI chr 1:199,438,029...199,439,062
Ensembl chr 1:199,437,832...199,439,210
JBrowse link
G Rbm14 RNA binding motif protein 14 ISO
IBA
(PMID:28712728)
PMID:21873635
RGD PMID:28712728, PMID:21873635 RGD:13792537 NCBI chr 1:220,048,740...220,067,124
Ensembl chr 1:220,048,873...220,067,124
JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,994,237...40,994,990 JBrowse link
G RGD1565762 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:5,480,069...5,480,782 JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:61,748,590...61,803,314
Ensembl chr 8:61,762,768...61,803,099
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 ISO
IBA
(PMID:18818105)
PMID:21873635
(MGI:MGI:5487473|PMID:23258412), (MGI:MGI:5487515|PMID:21947006)
RGD PMID:18818105, PMID:21947006, PMID:23258412, PMID:21873635 MGI:MGI:5487473, MGI:MGI:5487515, RGD:13792537 NCBI chr18:28,529,537...28,535,828
Ensembl chr18:28,529,576...28,535,828
JBrowse link
G Tbk1 TANK-binding kinase 1 ISO MGI:MGI:3046789 (MGI:MGI:3530402|PMID:15661922) RGD PMID:15661922 MGI:MGI:3530402 NCBI chr 7:63,655,247...63,687,978
Ensembl chr 7:63,655,247...63,687,978
JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEA
MGI:MGI:1860885 (MGI:MGI:3530402|PMID:15661922)
GO_REF:0000107
RGD
Ensembl
PMID:15661922 GO_REF:0000107, MGI:MGI:3530402 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tlr9 toll-like receptor 9 ISO (MGI:MGI:5887188|PMID:25686612) RGD PMID:25686612 MGI:MGI:5887188 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Trim5 tripartite motif-containing 5 ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
G Zbp1 Z-DNA binding protein 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6434626|PMID:32296175), (MGI:MGI:6436412|PMID:32200799)
UniProt
RGD
PMID:32200799, PMID:32296175 GO_REF:0000024, MGI:MGI:6434626, MGI:MGI:6436412 NCBI chr 3:171,276,062...171,292,062
Ensembl chr 3:171,276,062...171,286,537
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 ISO (PMID:30135424), (PMID:30193849)
(MGI:MGI:6209107|PMID:30135424), (MGI:MGI:6271678|PMID:30193849)
RGD PMID:30135424, PMID:30193849 MGI:MGI:6209107, MGI:MGI:6271678 NCBI chr 3:147,877,321...147,881,434
Ensembl chr 3:147,878,936...147,880,138
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Fcnb ficolin B ISO (PMID:21037097) RGD PMID:21037097 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284
JBrowse link
G Ffar2 free fatty acid receptor 2 ISO
ISS
(PMID:21037097)
GO_REF:0000024
RGD
UniProt
PMID:21037097 GO_REF:0000024 NCBI chr 1:89,268,197...89,271,942
Ensembl chr 1:89,268,938...89,269,930
JBrowse link
G Tlr2 toll-like receptor 2 ISO MGI:MGI:2178675 (MGI:MGI:3042099|PMID:12719478) RGD PMID:12719478 MGI:MGI:3042099 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
innate immune response-activating signal transduction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr4 toll-like receptor 4 IMP RGD PMID:19226379 RGD:2312509 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
positive regulation of antifungal innate immune response term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g5 phospholipase A2, group V ISS
ISO
GO_REF:0000024
(MGI:MGI:3841317|PMID:19342668)
UniProt
RGD
PMID:19342668 GO_REF:0000024, MGI:MGI:3841317 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
positive regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:MGI:2447193 (MGI:MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073
JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:16888103)
(MGI:MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:2176946|MGI:MGI:3511276 (MGI:MGI:3798012|PMID:18339625) RGD PMID:18339625 MGI:MGI:3798012 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 ISO (PMID:20061403), (PMID:20639463) RGD PMID:20061403, PMID:20639463 NCBI chr19:10,904,381...11,006,202
Ensembl chr19:10,905,542...10,976,396
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO
IBA
(PMID:27796300)
PMID:21873635
(MGI:MGI:5905929|PMID:27796300)
RGD PMID:27796300, PMID:21873635 MGI:MGI:5905929, RGD:13792537 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799
JBrowse link
G Txk TXK tyrosine kinase ISO (PMID:11859127) RGD PMID:11859127 NCBI chr14:38,029,809...38,085,822
Ensembl chr14:38,030,189...38,085,919
JBrowse link
positive regulation of natural killer cell cytokine production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032888.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:87,415,531...87,415,884 JBrowse link
G Cd160 CD160 molecule ISO (PMID:17307798) RGD PMID:17307798 NCBI chr 2:198,933,681...198,965,380
Ensembl chr 2:198,935,133...198,942,732
JBrowse link
G Cd226 CD226 molecule ISO
IBA
MGI:MGI:4454325 (MGI:MGI:5569209|PMID:24658051)
PMID:21873635
RGD PMID:24658051, PMID:21873635 MGI:MGI:5569209, RGD:13792537 NCBI chr18:86,299,392...86,394,772
Ensembl chr18:86,299,463...86,394,765
JBrowse link
G Clnk cytokine-dependent hematopoietic cell linker ISO (MGI:MGI:3774350|PMID:16439675) RGD PMID:16439675 MGI:MGI:3774350 NCBI chr14:76,657,165...76,834,050
Ensembl chr14:76,657,311...76,833,161
JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:15100275 RGD:2303778 NCBI chr 4:78,377,228...78,386,683
Ensembl chr 4:78,378,144...78,385,577
JBrowse link
G Il21 interleukin 21 ISO (MGI:MGI:3028812|PMID:14764669) RGD PMID:14764669 MGI:MGI:3028812 NCBI chr 2:123,965,021...123,972,356
Ensembl chr 2:123,965,021...123,972,356
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 ISO (PMID:27455421) RGD PMID:27455421 NCBI chr20:4,892,702...4,896,993
Ensembl chr20:4,892,702...4,896,991
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 ISO (PMID:30134159) RGD PMID:30134159 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
positive regulation of natural killer cell degranulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr19:41,805,252...41,860,076 JBrowse link
G Cd160 CD160 molecule ISO (PMID:19109136) RGD PMID:19109136 NCBI chr 2:198,933,681...198,965,380
Ensembl chr 2:198,935,133...198,942,732
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr16:81,689,576...81,714,341
Ensembl chr16:81,689,335...81,714,419
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 ISO (PMID:27455421) RGD PMID:27455421 NCBI chr20:4,892,702...4,896,993
Ensembl chr20:4,892,702...4,896,991
JBrowse link
positive regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr19:41,805,252...41,860,076 JBrowse link
G Cadm1 cell adhesion molecule 1 ISO
ISS
(PMID:15811952)
GO_REF:0000024
(MGI:MGI:3689781|PMID:15811952)
RGD
UniProt
PMID:15811952 GO_REF:0000024, MGI:MGI:3689781 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cd160 CD160 molecule ISO (PMID:12486241), (PMID:17307798) RGD PMID:12486241, PMID:17307798 NCBI chr 2:198,933,681...198,965,380
Ensembl chr 2:198,935,133...198,942,732
JBrowse link
G Cd226 CD226 molecule ISO (PMID:16304049) RGD PMID:16304049 NCBI chr18:86,299,392...86,394,772
Ensembl chr18:86,299,463...86,394,765
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule ISO (PMID:15811952)
(MGI:MGI:3689781|PMID:15811952)
RGD PMID:15811952 MGI:MGI:3689781 NCBI chr 8:45,152,584...45,216,082
Ensembl chr 8:45,153,308...45,215,974
JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:15100275 RGD:2303778 NCBI chr 4:78,377,228...78,386,683
Ensembl chr 4:78,378,144...78,385,577
JBrowse link
G Il12a interleukin 12A ISO (PMID:2204066) RGD PMID:2204066 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il18rap interleukin 18 receptor accessory protein ISO MGI:MGI:3579137 (MGI:MGI:3578455|PMID:15843532) RGD PMID:15843532 MGI:MGI:3578455 NCBI chr 9:47,225,543...47,255,805
Ensembl chr 9:47,225,585...47,258,503
JBrowse link
G Il21 interleukin 21 ISO
IBA
(MGI:MGI:3028812|PMID:14764669)
PMID:21873635
(PMID:18005035)
RGD PMID:14764669, PMID:18005035, PMID:21873635 MGI:MGI:3028812, RGD:13792537 NCBI chr 2:123,965,021...123,972,356
Ensembl chr 2:123,965,021...123,972,356
JBrowse link
G Klrb1c killer cell lectin like receptor B1C ISO (MGI:MGI:1336837|PMID:10229828), (MGI:MGI:1336838|PMID:10229823) RGD PMID:10229823, PMID:10229828 MGI:MGI:1336837, MGI:MGI:1336838 NCBI chr 4:162,528,614...162,553,421
Ensembl chr 4:162,541,751...162,553,705
JBrowse link
G Klre1 killer cell lectin-like receptor, family E, member 1 ISO (PMID:15294961) RGD PMID:15294961 NCBI chr 4:163,346,684...163,355,050
Ensembl chr 4:163,349,125...163,354,976
JBrowse link
G Klrk1 killer cell lectin like receptor K1 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:MGI:2450811|PMID:12645935), (MGI:MGI:3054301|PMID:15294961)
GO_REF:0000024
(PMID:15294961)
Ensembl
RGD
UniProt
PMID:12645935, PMID:15294961, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2450811, MGI:MGI:3054301, RGD:13792537 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
G Lag3 lymphocyte activating 3 ISO MGI:MGI:2176269 (MGI:MGI:80003|PMID:8602528) RGD PMID:8602528 MGI:MGI:80003 NCBI chr 4:157,425,644...157,433,700
Ensembl chr 4:157,425,644...157,433,467
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 ISO (PMID:23632890) RGD PMID:23632890 NCBI chr16:81,689,576...81,714,341
Ensembl chr16:81,689,335...81,714,419
JBrowse link
G LOC100909797 RT1 class I histocompatibility antigen, AA alpha chain-like ISO MGI:MGI:3701255 (MGI:MGI:3700871|PMID:16476767) RGD PMID:16476767 MGI:MGI:3700871 NCBI chr20:3,242,236...3,253,995
Ensembl chr20:3,242,470...3,249,189
JBrowse link
G Ly49s3 Ly-49 stimulatory receptor 3 IDA RGD PMID:12077224 RGD:633264 Ensembl chr 4:164,470,397...164,900,857 JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 ISO
IBA
IEA
(PMID:16304049)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16304049, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr20:5,170,169...5,175,773
Ensembl chr20:5,170,215...5,175,773
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO (PMID:16304049) RGD PMID:16304049 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Pvr PVR cell adhesion molecule ISO (PMID:16304049) RGD PMID:16304049 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701
JBrowse link
G Raet1e retinoic acid early transcript 1E ISO (PMID:18544572) RGD PMID:18544572 NCBI chr 1:1,101,666...1,120,340
Ensembl chr 1:1,101,965...1,116,926
JBrowse link
G Raet1l retinoic acid early transcript 1L IDA RGD PMID:20306467 RGD:9685184 NCBI chr 7:114,233,896...114,234,243 JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 ISO (PMID:19933860) RGD PMID:19933860 NCBI chr 3:108,984,029...109,044,420
Ensembl chr 3:108,984,029...109,044,420
JBrowse link
G Rrlt similar to retinoic acid early transcript 1L IDA RGD PMID:20306467 RGD:9685184 NCBI chr 1:1,437,716...1,442,089 JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:1,814,661...1,833,033
Ensembl chr20:1,814,661...1,818,800
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 ISO (PMID:23335510) RGD PMID:23335510 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
G Sh2d1a SH2 domain containing 1A ISO MGI:MGI:1349420|MGI:MGI:3575311|MGI:MGI:3622649 (MGI:MGI:3639618|PMID:16127454), (MGI:MGI:4355255|PMID:19648922) RGD PMID:16127454, PMID:19648922 MGI:MGI:3639618, MGI:MGI:4355255 NCBI chr  X:128,897,053...128,925,408
Ensembl chr  X:128,897,181...128,925,407
JBrowse link
G Sh2d1b2 SH2 domain containing 1B2 ISO MGI:MGI:1328352|MGI:MGI:1349420|MGI:MGI:98923 (MGI:MGI:4355255|PMID:19648922), (MGI:MGI:4839659|PMID:20962259) RGD PMID:19648922, PMID:20962259 MGI:MGI:4355255, MGI:MGI:4839659 NCBI chr13:88,557,361...88,584,078
Ensembl chr13:88,557,860...88,577,691
JBrowse link
G Slamf6 SLAM family member 6 ISO (PMID:16920955) RGD PMID:16920955 NCBI chr13:90,300,160...90,321,781
Ensembl chr13:90,301,006...90,322,457
JBrowse link
G Stat5a signal transducer and activator of transcription 5A ISO MGI:MGI:1857249 (MGI:MGI:3655409|PMID:9841920) RGD PMID:9841920 MGI:MGI:3655409 NCBI chr10:88,764,732...88,789,060
Ensembl chr10:88,764,732...88,789,057
JBrowse link
G Stat5b signal transducer and activator of transcription 5B ISO
IEA
MGI:MGI:2181592 (MGI:MGI:3655409|PMID:9841920)
GO_REF:0000107
RGD
Ensembl
PMID:9841920 GO_REF:0000107, MGI:MGI:3655409 NCBI chr10:88,686,207...88,712,313
Ensembl chr10:88,686,207...88,754,829
JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 ISO
IEA
MGI:MGI:1349420|MGI:MGI:3622649 (MGI:MGI:4839659|PMID:20962259)
GO_REF:0000107
RGD
Ensembl
PMID:20962259 GO_REF:0000107, MGI:MGI:4839659 NCBI chr 9:9,617,551...9,675,167
Ensembl chr 9:9,617,786...9,675,110
JBrowse link
positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032888.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:87,415,531...87,415,884 JBrowse link
G Cd226 CD226 molecule ISO
IBA
(PMID:12913096)
PMID:21873635
RGD PMID:12913096, PMID:21873635 RGD:13792537 NCBI chr18:86,299,392...86,394,772
Ensembl chr18:86,299,463...86,394,765
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule ISO
IBA
(PMID:15811952)
PMID:21873635
(MGI:MGI:3689781|PMID:15811952)
RGD PMID:15811952, PMID:21873635 MGI:MGI:3689781, RGD:13792537 NCBI chr 8:45,152,584...45,216,082
Ensembl chr 8:45,153,308...45,215,974
JBrowse link
G Il12a interleukin 12A ISO
IEA
(PMID:7903063)
GO_REF:0000107
RGD
Ensembl
PMID:7903063 GO_REF:0000107 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il12b interleukin 12B ISO (PMID:7903063) RGD PMID:7903063 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Klrk1 killer cell lectin like receptor K1 IMP RGD PMID:16323246 RGD:9685180 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO
IBA
(PMID:12913096)
PMID:21873635
RGD PMID:12913096, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Pvr PVR cell adhesion molecule ISO (PMID:12913096) RGD PMID:12913096 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701
JBrowse link
G Rrlt similar to retinoic acid early transcript 1L IMP RGD PMID:16323246 RGD:9685180 NCBI chr 1:1,437,716...1,442,089 JBrowse link
positive regulation of natural killer cell mediated immune response to tumor cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 molecule ISO (MGI:MGI:5644003|PMID:25711213) RGD PMID:25711213 MGI:MGI:5644003 NCBI chr 2:198,933,681...198,965,380
Ensembl chr 2:198,935,133...198,942,732
JBrowse link
positive regulation of natural killer cell mediated immunity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-S3 RT1 class Ib, locus S3 ISO (PMID:9754572) RGD PMID:9754572 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
positive regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein ISO
IEA
(MGI:MGI:1097829|PMID:9338787)
GO_REF:0000107
RGD
Ensembl
PMID:9338787 GO_REF:0000107, MGI:MGI:1097829 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Rps19 ribosomal protein S19 ISO (PMID:15750715) RGD PMID:15750715 NCBI chr 1:81,750,873...81,756,629
Ensembl chr 1:81,750,928...81,756,627
JBrowse link
positive regulation of response to interferon-gamma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:MGI:2447193 (MGI:MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073
JBrowse link
positive regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fadd Fas associated via death domain ISO (PMID:21109225) RGD PMID:21109225 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ISO (MGI:MGI:5792628|PMID:27129230) RGD PMID:27129230 MGI:MGI:5792628 NCBI chr13:48,031,325...48,056,394
Ensembl chr13:48,031,410...48,056,394
JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:3718275|PMID:17618271) RGD PMID:17618271 MGI:MGI:3718275 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Irf7 interferon regulatory factor 7 ISO (MGI:MGI:3718275|PMID:17618271) RGD PMID:17618271 MGI:MGI:3718275 NCBI chr 1:214,249,388...214,252,909
Ensembl chr 1:214,248,837...214,252,456
JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor ISO (MGI:MGI:5432265|PMID:22745163) RGD PMID:22745163 MGI:MGI:5432265 NCBI chr 1:90,200,866...90,246,292
Ensembl chr 1:90,200,876...90,246,297
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:16127453), (PMID:20451243) RGD PMID:16127453, PMID:20451243 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567
JBrowse link
G Mmp12 matrix metallopeptidase 12 IEA
ISO
GO_REF:0000107
(MGI:MGI:5583923|PMID:24784232)
Ensembl
RGD
PMID:24784232 GO_REF:0000107, MGI:MGI:5583923 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 ISO (PMID:20061403) RGD PMID:20061403 NCBI chr19:10,904,381...11,006,202
Ensembl chr19:10,905,542...10,976,396
JBrowse link
G Tbk1 TANK-binding kinase 1 ISO (MGI:MGI:5792628|PMID:27129230) RGD PMID:27129230 MGI:MGI:5792628 NCBI chr 7:63,655,247...63,687,978
Ensembl chr 7:63,655,247...63,687,978
JBrowse link
G Trim6 tripartite motif containing 6 ISO (PMID:24882218)
(MGI:MGI:5645191|PMID:24882218)
RGD PMID:24882218 MGI:MGI:5645191 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K ISO (PMID:24882218) RGD PMID:24882218 NCBI chr14:44,289,247...44,348,691
Ensembl chr14:44,289,247...44,348,691
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(PMID:19399181)
GO_REF:0000107
RGD
Ensembl
PMID:19399181 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zbp1 Z-DNA binding protein 1 ISO
IEA
IBA
(MGI:MGI:3718275|PMID:17618271)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:17618271, PMID:21873635 GO_REF:0000002, MGI:MGI:3718275, RGD:13792537 NCBI chr 3:171,276,062...171,292,062
Ensembl chr 3:171,276,062...171,286,537
JBrowse link
stimulatory C-type lectin receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klre1 killer cell lectin-like receptor, family E, member 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:163,346,684...163,355,050
Ensembl chr 4:163,349,125...163,354,976
JBrowse link
G Klrk1 killer cell lectin like receptor K1 ISO
IEA
(MGI:MGI:2450811|PMID:12645935)
GO_REF:0000107
RGD
Ensembl
PMID:12645935 GO_REF:0000107, MGI:MGI:2450811 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
susceptibility to natural killer cell mediated cytotoxicity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 ISO
IBA
ISS
(PMID:15811952)
PMID:21873635
GO_REF:0000024
(MGI:MGI:3689781|PMID:15811952)
RGD
UniProt
PMID:15811952, PMID:21873635 GO_REF:0000024, MGI:MGI:3689781, RGD:13792537 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO
IBA
(PMID:12913096)
PMID:21873635
RGD PMID:12913096, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Pvr PVR cell adhesion molecule ISO (PMID:12913096) RGD PMID:12913096 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701
JBrowse link
G Ulbp1 UL16 binding protein 1 ISO (MGI:MGI:2450811|PMID:12645935) RGD PMID:12645935 MGI:MGI:2450811 NCBI chr 1:1,181,301...1,200,526
Ensembl chr 1:1,180,932...1,220,916
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to biotic stimulus 1745
        positive regulation of response to biotic stimulus 192
          positive regulation of innate immune response 149
            activation of innate immune response + 52
            positive regulation of age-related resistance 0
            positive regulation of antifungal innate immune response 1
            positive regulation of complement activation, alternative pathway + 0
            positive regulation of complement activation, lectin pathway + 0
            positive regulation of defense response to bacterium, incompatible interaction 0
            positive regulation of innate immunity memory response 0
            positive regulation of melanization defense response 0
            positive regulation of natural killer cell mediated immunity + 36
            positive regulation of plant-type hypersensitive response 0
            positive regulation of respiratory burst involved in inflammatory response 2
            positive regulation of response to interferon-gamma + 6
            positive regulation of systemic acquired resistance + 0
            positive regulation of type I interferon-mediated signaling pathway 13
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to biotic stimulus 1745
        response to external biotic stimulus 1712
          response to other organism 1708
            defense response to other organism 1119
              innate immune response 836
                regulation of innate immune response 223
                  positive regulation of innate immune response 149
                    activation of innate immune response + 52
                    positive regulation of age-related resistance 0
                    positive regulation of antifungal innate immune response 1
                    positive regulation of complement activation, alternative pathway + 0
                    positive regulation of complement activation, lectin pathway + 0
                    positive regulation of defense response to bacterium, incompatible interaction 0
                    positive regulation of innate immunity memory response 0
                    positive regulation of melanization defense response 0
                    positive regulation of natural killer cell mediated immunity + 36
                    positive regulation of plant-type hypersensitive response 0
                    positive regulation of respiratory burst involved in inflammatory response 2
                    positive regulation of response to interferon-gamma + 6
                    positive regulation of systemic acquired resistance + 0
                    positive regulation of type I interferon-mediated signaling pathway 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.