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ONTOLOGY REPORT - ANNOTATIONS


Term:late endosome to vacuole transport
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Accession:GO:0045324 term browser browse the term
Definition:The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport.


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late endosome to vacuole transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Becn2 beclin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,971,720...93,974,467
Ensembl chr13:93,972,426...93,974,410
JBrowse link
G Chmp1a charged multivesicular body protein 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:56,001,724...56,010,004
Ensembl chr19:56,001,724...56,010,004
JBrowse link
G Chmp2a charged multivesicular body protein 2A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp7 charged multivesicular body protein 7 ISO (PMID:16856878) RGD PMID:16856878 NCBI chr15:51,385,373...51,400,606
Ensembl chr15:51,385,386...51,400,606
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,300,248...114,350,686
Ensembl chr 8:114,300,257...114,350,681
JBrowse link
G RGD1566265 similar to RIKEN cDNA 2610002M06 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,870,964...78,911,601
Ensembl chr  X:78,870,964...78,911,601
JBrowse link
late endosome to vacuole transport via multivesicular body sorting pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:67,059,939...67,060,988
Ensembl chr 4:67,059,939...67,060,974
JBrowse link
G Chmp4c charged multivesicular body protein 4C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Chmp5 charged multivesicular body protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Chmp6 charged multivesicular body protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348
JBrowse link
G Chmp7 charged multivesicular body protein 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,385,373...51,400,606
Ensembl chr15:51,385,386...51,400,606
JBrowse link
G Leprot leptin receptor overlapping transcript IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:120,498,910...120,511,011
Ensembl chr 5:120,498,883...120,511,017
JBrowse link
G Leprotl1 leptin receptor overlapping transcript-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:61,758,941...61,769,655
Ensembl chr16:61,758,917...61,771,569
JBrowse link
G Tmem50a transmembrane protein 50A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,233,965...153,252,006
Ensembl chr 5:153,233,962...153,252,021
JBrowse link
G Tmem50b transmembrane protein 50B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,719,441...31,752,276
Ensembl chr11:31,719,443...31,752,243
JBrowse link
G Vta1 vesicle trafficking 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244
JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Stam signal transducing adaptor molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:81,209,795...81,256,111
Ensembl chr17:81,209,867...81,255,808
JBrowse link
G Vps25 vacuolar protein sorting 25 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:89,174,684...89,180,165
Ensembl chr10:89,174,684...89,180,160
JBrowse link
G Vps28 VPS28 subunit of ESCRT-I IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 7:117,684,339...117,688,187
Ensembl chr 7:117,684,339...117,688,187
JBrowse link
G Vps36 vacuolar protein sorting 36 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:74,719,642...74,743,921
Ensembl chr16:74,719,553...74,743,927
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      vacuolar transport 158
        late endosome to vacuole transport 24
          late endosome to lysosome transport via multivesicular body sorting pathway 0
          late endosome to vacuole transport via multivesicular body sorting pathway + 16
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          vacuolar transport 158
            late endosome to vacuole transport 24
              late endosome to lysosome transport via multivesicular body sorting pathway 0
              late endosome to vacuole transport via multivesicular body sorting pathway + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.