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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of osteoblast differentiation
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Accession:GO:0045667 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of osteoblast differentiation.


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regulation of osteoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO MGI:MGI:1857966 (MGI:MGI:3584206|PMID:15802266) RGD PMID:15802266 MGI:MGI:3584206 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Atf4 activating transcription factor 4 ISO
ISS
(PMID:15109498)
(MGI:MGI:3040115|PMID:15109498)
GO_REF:0000024
RGD
UniProt
PMID:15109498 GO_REF:0000024, MGI:MGI:3040115 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:MGI:2148567|MGI:MGI:3044412 (MGI:MGI:3511731|PMID:15576404), (MGI:MGI:3584206|PMID:15802266) RGD PMID:15576404, PMID:15802266 MGI:MGI:3511731, MGI:MGI:3584206 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (MGI:MGI:5315698|PMID:17960593) RGD PMID:17960593 MGI:MGI:5315698 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:11381083 RGD:1625633 NCBI chr 1:222,168,729...222,178,842
Ensembl chr 1:222,168,730...222,178,725
JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:1334084 RGD:61590 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gli1 GLI family zinc finger 1 ISO (MGI:MGI:5429486|PMID:22493482) RGD PMID:22493482 MGI:MGI:5429486 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:28731198 RGD:13792731 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hemgn hemogen IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11161722, PMID:21873635 RGD:632552, RGD:13792537 NCBI chr 5:62,004,271...62,025,075
Ensembl chr 5:62,005,071...62,025,152
JBrowse link
G Mir188 microRNA 188 ISO (MGI:MGI:5643971|PMID:25751060) RGD PMID:25751060 MGI:MGI:5643971 NCBI chr  X:16,110,270...16,110,349
Ensembl chr  X:16,110,270...16,110,349
JBrowse link
G Nell1 neural EGFL like 1 IMP RGD PMID:12235118 RGD:633405 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 ISO (MGI:MGI:3723333|PMID:17623776) RGD PMID:17623776 MGI:MGI:3723333 NCBI chr18:73,479,863...73,524,956
Ensembl chr18:73,378,662...73,524,956
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
(PMID:19949837)
GO_REF:0000107
RGD
Ensembl
PMID:19949837 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16927379)
Ensembl
UniProt
RGD
PMID:16927379 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Rassf2 Ras association domain family member 2 ISO
IEA
MGI:MGI:5314787 (MGI:MGI:5314467|PMID:22227519)
GO_REF:0000107
RGD
Ensembl
PMID:22227519 GO_REF:0000107, MGI:MGI:5314467 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:MGI:5641106|PMID:25838543)
UniProt
RGD
PMID:25838543 GO_REF:0000024, MGI:MGI:5641106 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Runx2 RUNX family transcription factor 2 TAS
ISO
(MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588, PMID:9651525 MGI:MGI:5013854, RGD:69800 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 ISO (PMID:20359165) RGD PMID:20359165 NCBI chr 6:104,718,403...104,879,611
Ensembl chr 6:104,718,512...104,877,980
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:19756381), (PMID:21182836) RGD PMID:19756381, PMID:21182836 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:MGI:1856973 (MGI:MGI:5315781|PMID:22351931) RGD PMID:22351931 MGI:MGI:5315781 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
negative regulation of osteoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Areg amphiregulin IDA RGD PMID:15509566 RGD:1578718 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Axin2 axin 2 ISO
IEA
MGI:MGI:3579503 (MGI:MGI:3578608|PMID:15790973)
GO_REF:0000107
RGD
Ensembl
PMID:15790973 GO_REF:0000107, MGI:MGI:3578608 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Bambi BMP and activin membrane-bound inhibitor ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr17:56,905,419...56,909,675
Ensembl chr17:56,905,112...56,909,992
JBrowse link
G Cdk6 cyclin-dependent kinase 6 ISO (PMID:15254224) RGD PMID:15254224 NCBI chr 4:27,781,728...27,969,653
Ensembl chr 4:27,785,647...27,966,398
JBrowse link
G Chrd chordin ISO
IEA
(PMID:18533030)
GO_REF:0000107
(MGI:MGI:3577114|PMID:15780974)
RGD
Ensembl
PMID:15780974, PMID:18533030 GO_REF:0000107, MGI:MGI:3577114 NCBI chr11:83,858,503...83,867,543
Ensembl chr11:83,858,503...83,867,203
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO (MGI:MGI:4410428|PMID:18187554) RGD PMID:18187554 MGI:MGI:4410428 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr 6:788,490...962,663
Ensembl chr 6:788,548...960,703
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO (PMID:18282132) RGD PMID:18282132 NCBI chr 4:159,622,404...159,630,082
Ensembl chr 4:159,622,404...159,630,082
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:18690792 RGD:2325179 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fndc3b fibronectin type III domain containing 3B ISO MGI:MGI:4822558 (MGI:MGI:4818857|PMID:20493170) RGD PMID:20493170 MGI:MGI:4818857 NCBI chr 2:113,109,949...113,415,171
Ensembl chr 2:113,112,902...113,345,577
JBrowse link
G Gdf10 growth differentiation factor 10 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5545973|PMID:21712809)
Ensembl
UniProt
RGD
PMID:21712809 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5545973 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO
IMP
ISS
(PMID:27036124)
PMID:27910957
GO_REF:0000024
RGD
UniProt
PMID:27036124, PMID:27910957 GO_REF:0000024, RGD:38501075 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO
IEA
MGI:MGI:2653307 (MGI:MGI:3830408|PMID:19144722)
GO_REF:0000107
RGD
Ensembl
PMID:19144722 GO_REF:0000107, MGI:MGI:3830408 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:MGI:3584056 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO (MGI:MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:MGI:3584056 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac7 histone deacetylase 7 IEA
ISO
GO_REF:0000107
(PMID:17997710)
Ensembl
RGD
PMID:17997710 GO_REF:0000107 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Hdac8 histone deacetylase 8 IMP RGD PMID:25019367 RGD:13208813 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Hoxa2 homeobox A2 ISO (MGI:MGI:4948784|PMID:21324897) RGD PMID:21324897 MGI:MGI:4948784 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO MGI:MGI:1321394 (MGI:MGI:3050935|PMID:15161906) RGD PMID:15161906 MGI:MGI:3050935 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO MGI:MGI:1321394 (MGI:MGI:3050908|PMID:15246553) RGD PMID:15246553 MGI:MGI:3050908 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO MGI:MGI:1321394 (MGI:MGI:3050935|PMID:15161906) RGD PMID:15161906 MGI:MGI:3050935 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 ISO MGI:MGI:87986|MGI:MGI:88177 (MGI:MGI:3837587|PMID:19208758) RGD PMID:19208758 MGI:MGI:3837587 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
G Limd1 LIM domains containing 1 ISO
ISS
(MGI:MGI:3807091|PMID:18657804)
GO_REF:0000024
RGD
UniProt
PMID:18657804 GO_REF:0000024, MGI:MGI:3807091 NCBI chr 8:132,553,218...132,598,826
Ensembl chr 8:132,553,218...132,598,812
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (PMID:17680723) RGD PMID:17680723 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Men1 menin 1 ISO MGI:MGI:1316736 (PMID:15563473)
MGI:MGI:96648 (MGI:MGI:3056877|PMID:15150273), (MGI:MGI:3573815|PMID:15563473)
RGD PMID:15150273, PMID:15563473 MGI:MGI:3056877, MGI:MGI:3573815 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mir125a microRNA 125a IMP RGD PMID:29319166 RGD:26884461 NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
JBrowse link
G Mir133a1 microRNA 133a-1 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr18:2,052,478...2,052,564 JBrowse link
G Mir137 microRNA 137 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr 2:221,658,106...221,658,207
Ensembl chr 2:221,658,106...221,658,207
JBrowse link
G Mir204 microRNA 204 ISO
IMP
(MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588, PMID:29319166 MGI:MGI:5013854, RGD:26884461 NCBI chr 1:240,403,000...240,403,109
Ensembl chr 1:240,403,000...240,403,109
JBrowse link
G Mir205 microRNA 205 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Mir217 microRNA 217 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr14:113,119,529...113,119,633
Ensembl chr14:113,119,529...113,119,633
JBrowse link
G Mir23a microRNA 23a ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656
JBrowse link
G Mir30c1 microRNA 30c-1 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr 5:139,699,877...139,699,965
Ensembl chr 5:139,699,877...139,699,965
JBrowse link
G Mir30c2 microRNA 30c-2 ISO (MGI:MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:MGI:5013854 NCBI chr 9:29,562,376...29,562,459
Ensembl chr 9:29,562,376...29,562,459
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor ISO
IEA
(MGI:MGI:4818844|PMID:20616007)
GO_REF:0000107
RGD
Ensembl
PMID:20616007 GO_REF:0000107, MGI:MGI:4818844 NCBI chr10:89,455,202...89,483,791
Ensembl chr10:89,459,650...89,484,080
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 ISO (MGI:MGI:4398991|PMID:19463978) RGD PMID:19463978 MGI:MGI:4398991 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
G Noct nocturnin ISO
ISS
(MGI:MGI:4457955|PMID:20498072)
GO_REF:0000024
RGD
UniProt
PMID:20498072 GO_REF:0000024, MGI:MGI:4457955 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Nog noggin ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:4412151|PMID:19695258) RGD PMID:19695258 MGI:MGI:4412151 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Ostn osteocrin ISO (MGI:MGI:2683819|PMID:14523025) RGD PMID:14523025 MGI:MGI:2683819 NCBI chr11:76,851,923...76,888,140
Ensembl chr11:76,851,322...76,888,178
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Ptch1 patched 1 ISO (PMID:16229683) RGD PMID:16229683 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ranbp3l RAN binding protein 3-like ISO (MGI:MGI:5883200|PMID:25755279) RGD PMID:25755279 MGI:MGI:5883200 NCBI chr 2:58,221,773...58,458,072
Ensembl chr 2:58,448,917...58,458,517
JBrowse link
G Riox1 ribosomal oxygenase 1 ISO (MGI:MGI:4418587|PMID:19927124) RGD PMID:19927124 MGI:MGI:4418587 NCBI chr 6:107,428,508...107,431,126
Ensembl chr 6:107,428,508...107,431,116
JBrowse link
G Rorb RAR-related orphan receptor B IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5554363|PMID:22189870)
Ensembl
UniProt
RGD
PMID:22189870 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5554363 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839
JBrowse link
G Sema4d semaphorin 4D ISO (MGI:MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:MGI:5297297 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:3045799 (MGI:MGI:3040721|PMID:14976225)
GO_REF:0000107
RGD
Ensembl
PMID:14976225 GO_REF:0000107, MGI:MGI:3040721 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Ski SKI proto-oncogene ISO (PMID:14699069) RGD PMID:14699069 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad6 SMAD family member 6 ISO (PMID:22275001) RGD PMID:22275001 NCBI chr 8:68,897,746...68,967,221
Ensembl chr 8:68,898,296...68,966,108
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:MGI:3577701|PMID:15781477) RGD PMID:15781477 MGI:MGI:3577701 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:MGI:5317468|PMID:22421045), (MGI:MGI:6323929|PMID:31121357), (MGI:MGI:6414737|PMID:32103177)
UniProt
RGD
PMID:22421045, PMID:31121357, PMID:32103177 GO_REF:0000024, MGI:MGI:5317468, MGI:MGI:6323929, MGI:MGI:6414737 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tmem64 transmembrane protein 64 ISO (MGI:MGI:5643786|PMID:25979161) RGD PMID:25979161 MGI:MGI:5643786 NCBI chr 5:28,850,864...28,898,203
Ensembl chr 5:28,850,950...28,867,227
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:MGI:5285024|PMID:21689636) RGD PMID:21689636 MGI:MGI:5285024 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnn tenascin N ISO (MGI:MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:MGI:3710297 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tob1 transducer of ErbB-2.1 ISO
IEA
MGI:MGI:1933294 (MGI:MGI:1928565|PMID:11163184)
GO_REF:0000107
RGD
Ensembl
PMID:11163184 GO_REF:0000107, MGI:MGI:1928565 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:101,293,300...101,323,484
Ensembl chr 1:101,293,409...101,323,960
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:MGI:3042355|PMID:15030764)
(PMID:16888803)
RGD PMID:15030764, PMID:16888803 MGI:MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO
ISS
MGI:MGI:3044412 (MGI:MGI:3042355|PMID:15030764)
GO_REF:0000024
(PMID:11062344)
RGD
UniProt
PMID:11062344, PMID:15030764 GO_REF:0000024, MGI:MGI:3042355 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO (MGI:MGI:3577114|PMID:15780974) RGD PMID:15780974 MGI:MGI:3577114 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated ISO (MGI:MGI:3784758|PMID:18156182) RGD PMID:18156182 MGI:MGI:3784758 NCBI chr17:77,252,099...77,262,301
Ensembl chr17:77,252,100...77,261,731
JBrowse link
G Vegfc vascular endothelial growth factor C ISO (MGI:MGI:6378108|PMID:26934950) RGD PMID:26934950 MGI:MGI:6378108 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
positive regulation of osteoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Acvr2a activin A receptor type 2A ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
JBrowse link
G Acvr2b activin A receptor type 2B ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5575464|PMID:22467241)
Ensembl
UniProt
RGD
PMID:22467241 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5575464 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:3050916|PMID:15175325), (MGI:MGI:3587162|PMID:16099986), (MGI:MGI:5009350|PMID:20675382)
(PMID:15254224), (PMID:16433617), (PMID:18436533), (PMID:20576608)
UniProt
RGD
PMID:15175325, PMID:15254224, PMID:16099986, PMID:16433617, PMID:18436533, PMID:20576608, PMID:20675382 GO_REF:0000024, MGI:MGI:3050916, MGI:MGI:3587162, MGI:MGI:5009350 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP
ISO
ISS
IEA
IDA
(PMID:14749725), (PMID:18436533)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:14749725, PMID:18436533, PMID:17112416, PMID:16245174 GO_REF:0000024, GO_REF:0000107, RGD:1643600, RGD:2289011 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 IMP
ISO
(PMID:18436533) RGD PMID:18436533, PMID:9202223 RGD:2289027 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (PMID:18436533) RGD PMID:18436533 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Ccn1 cellular communication network factor 1 ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(PMID:20684029)
Ensembl
RGD
PMID:20684029 GO_REF:0000107 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Cd276 Cd276 molecule ISO MGI:MGI:3033707 (MGI:MGI:3052626|PMID:15317945) RGD PMID:15317945 MGI:MGI:3052626 NCBI chr 8:63,312,060...63,350,411
Ensembl chr 8:63,318,019...63,350,269
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha ISO
IEA
(MGI:MGI:3050916|PMID:15175325)
GO_REF:0000107
RGD
Ensembl
PMID:15175325 GO_REF:0000107, MGI:MGI:3050916 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO (MGI:MGI:3050916|PMID:15175325) RGD PMID:15175325 MGI:MGI:3050916 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta ISO (MGI:MGI:3050916|PMID:15175325) RGD PMID:15175325 MGI:MGI:3050916 NCBI chr11:89,008,008...89,009,146
Ensembl chr11:89,008,008...89,009,146
JBrowse link
G Clic1 chloride intracellular channel 1 ISO (MGI:MGI:4410403|PMID:19703605) RGD PMID:19703605 MGI:MGI:4410403 NCBI chr20:5,040,314...5,049,166
Ensembl chr20:5,040,337...5,049,166
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:MGI:3830252 (MGI:MGI:3829514|PMID:18779865) RGD PMID:18779865 MGI:MGI:3829514 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148591|MGI:MGI:2148594|MGI:MGI:2450929 (MGI:MGI:3578464|PMID:15866163)
GO_REF:0000107
RGD
Ensembl
PMID:15866163 GO_REF:0000107, MGI:MGI:3578464 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 ISO (PMID:18977368) RGD PMID:18977368 NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:88,311,639...88,436,561
Ensembl chr13:88,317,145...88,436,789
JBrowse link
G Dlx5 distal-less homeobox 5 IMP RGD PMID:12815054 RGD:1298882 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:6450489|PMID:25498833)
Ensembl
RGD
PMID:25498833 GO_REF:0000107, MGI:MGI:6450489 NCBI chr 2:251,912,432...251,970,699
Ensembl chr 2:251,912,368...251,970,768
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase ISO (MGI:MGI:5427766|PMID:22615579) RGD PMID:22615579 MGI:MGI:5427766 NCBI chr12:17,913,771...17,972,733
Ensembl chr12:17,913,767...17,972,737
JBrowse link
G Fbn2 fibrillin 2 ISO (MGI:MGI:4836762|PMID:20855508) RGD PMID:20855508 MGI:MGI:4836762 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fbxo5 F-box protein 5 ISO (PMID:29850565) RGD PMID:29850565 NCBI chr 1:42,461,277...42,467,646
Ensembl chr 1:42,461,291...42,467,586
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:29496737)
(MGI:MGI:6149626|PMID:29496737)
RGD PMID:29496737 MGI:MGI:6149626 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Ffar4 free fatty acid receptor 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:6220333|PMID:26365922)
UniProt
RGD
PMID:26365922 GO_REF:0000024, MGI:MGI:6220333 NCBI chr 1:256,786,124...256,804,156
Ensembl chr 1:256,786,124...256,804,156
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO MGI:MGI:95729 (MGI:MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:MGI:4821204 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Gdf10 growth differentiation factor 10 IDA RGD PMID:12559390 RGD:2316372 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ISO (MGI:MGI:2679742|PMID:12933806) RGD PMID:12933806 MGI:MGI:2679742 NCBI chr  X:70,563,381...70,572,295
Ensembl chr  X:70,563,570...70,572,295
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276|MGI:MGI:95516 (MGI:MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:MGI:4821204 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gnas GNAS complex locus ISO MGI:MGI:3043361 (MGI:MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:MGI:1321394|MGI:MGI:99829 (MGI:MGI:3836510|PMID:18986983) RGD PMID:18986983 MGI:MGI:3836510 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Igf1 insulin-like growth factor 1 IDA
IEA
ISO
GO_REF:0000107
(PMID:16433617)
Ensembl
RGD
PMID:16433617, PMID:16897348 GO_REF:0000107, RGD:1598452 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Il6 interleukin 6 ISO (PMID:30545407) RGD PMID:30545407 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Il6st interleukin 6 signal transducer ISO
IEA
(PMID:12372336)
GO_REF:0000107
RGD
Ensembl
PMID:12372336 GO_REF:0000107 NCBI chr 2:44,279,199...44,319,427
Ensembl chr 2:44,289,393...44,314,944
JBrowse link
G Ilk integrin-linked kinase ISO (MGI:MGI:5009350|PMID:20675382) RGD PMID:20675382 MGI:MGI:5009350 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO
IEA
(MGI:MGI:5522615|PMID:23980096)
GO_REF:0000107
RGD
Ensembl
PMID:23980096 GO_REF:0000107, MGI:MGI:5522615 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO MGI:MGI:1316736 (MGI:MGI:3573815|PMID:15563473) RGD PMID:15563473 MGI:MGI:3573815 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Lmna lamin A/C IMP RGD PMID:22119912 RGD:10003161 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Lrp3 LDL receptor related protein 3 ISO (PMID:28340487) RGD PMID:28340487 NCBI chr 1:91,447,308...91,462,603
Ensembl chr 1:91,448,361...91,462,603
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:MGI:6162346|PMID:26891291) RGD PMID:26891291 MGI:MGI:6162346 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Ltf lactotransferrin ISO (PMID:15166119) RGD PMID:15166119 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5285459|PMID:21652706)
Ensembl
UniProt
RGD
PMID:21652706 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5285459 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Men1 menin 1 ISO MGI:MGI:88177 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mir210 microRNA 210 ISO (MGI:MGI:3851892|PMID:19520079) RGD PMID:19520079 MGI:MGI:3851892 NCBI chr 1:214,208,355...214,208,464 JBrowse link
G Mnda myeloid cell nuclear differentiation antigen ISO MGI:MGI:88177 (MGI:MGI:3530710|PMID:15557274) RGD PMID:15557274 MGI:MGI:3530710 NCBI chr13:92,073,664...92,091,335
Ensembl chr13:92,073,668...92,089,980
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
(MGI:MGI:3050916|PMID:15175325)
GO_REF:0000107
RGD
Ensembl
PMID:15175325 GO_REF:0000107, MGI:MGI:3050916 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Nell1 neural EGFL like 1 ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Npnt nephronectin ISO (MGI:MGI:4414689|PMID:19944102), (MGI:MGI:5285024|PMID:21689636) RGD PMID:19944102, PMID:21689636 MGI:MGI:4414689, MGI:MGI:5285024 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:17562543 RGD:1642298 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Pdlim7 PDZ and LIM domain 7 IDA RGD PMID:9832452 RGD:632731 NCBI chr17:9,653,510...9,668,715
Ensembl chr17:9,653,561...9,668,712
JBrowse link
G Prkd1 protein kinase D1 ISO
ISS
(MGI:MGI:5306577|PMID:19029091)
GO_REF:0000024
RGD
UniProt
PMID:19029091 GO_REF:0000024, MGI:MGI:5306577 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:14751573 RGD:10043372 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
ISS
GO_REF:0000107
MGI:MGI:1316736|MGI:MGI:1341800 (MGI:MGI:3050916|PMID:15175325), (MGI:MGI:3056877|PMID:15150273), (MGI:MGI:3836510|PMID:18986983)
GO_REF:0000024
(PMID:28703881)
Ensembl
RGD
UniProt
PMID:15150273, PMID:15175325, PMID:18986983, PMID:28703881 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3050916, MGI:MGI:3056877, MGI:MGI:3836510 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 ISO MGI:MGI:5698367|MGI:MGI:96533 (MGI:MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:MGI:5698232 NCBI chr 1:174,428,056...174,495,356
Ensembl chr 1:174,428,699...174,495,258
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:98956 (MGI:MGI:3772759|PMID:18166153) RGD PMID:18166153 MGI:MGI:3772759 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Smad1 SMAD family member 1 ISO
IEA
MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273)
GO_REF:0000107
RGD
Ensembl
PMID:15150273 GO_REF:0000107, MGI:MGI:3056877 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad5 SMAD family member 5 ISO MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(PMID:20626275)
GO_REF:0000024
RGD
UniProt
PMID:20626275 GO_REF:0000024 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Suco SUN domain containing ossification factor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4452525|PMID:20440000)
Ensembl
UniProt
RGD
PMID:20440000 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4452525 NCBI chr13:79,736,485...79,801,133
Ensembl chr13:79,736,482...79,801,561
JBrowse link
G Tmem119 transmembrane protein 119 ISO
IBA
(PMID:20025746)
(MGI:MGI:4418582|PMID:20025746), (MGI:MGI:5543589|PMID:22416756), (MGI:MGI:6294241|PMID:22579779)
PMID:21873635
RGD PMID:20025746, PMID:22416756, PMID:22579779, PMID:21873635 MGI:MGI:4418582, MGI:MGI:5543589, MGI:MGI:6294241, RGD:13792537 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Tp63 tumor protein p63 ISO (PMID:22521434) RGD PMID:22521434 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:1931048 (MGI:MGI:5461755|PMID:22886301) RGD PMID:22886301 MGI:MGI:5461755 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:MGI:3574150|PMID:15728361), (MGI:MGI:4358631|PMID:19723499) RGD PMID:15728361, PMID:19723499 MGI:MGI:3574150, MGI:MGI:4358631 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(PMID:17720811)
GO_REF:0000107
RGD
Ensembl
PMID:17720811 GO_REF:0000107 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:MGI:3511731|PMID:15576404) RGD PMID:15576404 MGI:MGI:3511731 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO UniProtKB:Q96AC1 (PMID:29496737) RGD PMID:29496737 NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (PMID:29496737) RGD PMID:29496737 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
G Zhx3 zinc fingers and homeoboxes 3 ISO
ISS
(PMID:21174497)
GO_REF:0000024
RGD
UniProt
PMID:21174497 GO_REF:0000024 NCBI chr 3:156,759,820...156,868,173
Ensembl chr 3:156,764,751...156,777,999
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    multicellular organismal process 9046
      ossification 432
        osteoblast differentiation 225
          regulation of osteoblast differentiation 150
            negative regulation of osteoblast differentiation 63
            positive regulation of osteoblast differentiation 73
Path 2
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular developmental process 4459
        cell differentiation 4364
          regulation of cell differentiation 1683
            regulation of osteoblast differentiation 150
              negative regulation of osteoblast differentiation 63
              positive regulation of osteoblast differentiation 73
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.