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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of translation
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Accession:GO:0045727 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
Synonyms:exact_synonym: positive regulation of protein anabolism;   positive regulation of protein biosynthesis;   positive regulation of protein biosynthetic process;   positive regulation of protein formation;   positive regulation of protein synthesis;   up regulation of protein biosynthetic process;   upregulation of protein biosynthetic process
 narrow_synonym: activation of protein biosynthetic process;   stimulation of protein biosynthetic process
 alt_id: GO:0045946


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positive regulation of translation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032097.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr18:46,148,849...46,151,627 JBrowse link
G Abcf1 ATP binding cassette subfamily F member 1 ISO
ISS
(PMID:19570978)
GO_REF:0000024
RGD
UniProt
PMID:19570978 GO_REF:0000024 NCBI chr20:3,309,914...3,322,828
Ensembl chr20:3,309,899...3,322,825
JBrowse link
G Akap6 A-kinase anchoring protein 6 IMP RGD PMID:16306226 RGD:2312613 NCBI chr 6:73,553,111...73,991,992
Ensembl chr 6:73,553,210...73,990,534
JBrowse link
G Aurka aurora kinase A ISO (PMID:18614302) RGD PMID:18614302 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Barhl2 BarH-like homeobox 2 ISO (MGI:MGI:2654373|PMID:12657654) RGD PMID:12657654 MGI:MGI:2654373 NCBI chr14:4,362,717...4,367,614
Ensembl chr14:4,362,717...4,367,605
JBrowse link
G Bcl3 BCL3, transcription coactivator ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:80,730,758...80,745,273
Ensembl chr 1:80,730,499...80,744,831
JBrowse link
G Cdk4 cyclin-dependent kinase 4 IMP RGD PMID:12163013 RGD:704385 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IMP
ISO
(PMID:20662813) RGD PMID:20662813, PMID:19864575 RGD:9685154 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (MGI:MGI:5300629|PMID:22153079), (MGI:MGI:5648736|PMID:26074003), (MGI:MGI:5795795|PMID:26074071) RGD PMID:22153079, PMID:26074003, PMID:26074071 MGI:MGI:5300629, MGI:MGI:5648736, MGI:MGI:5795795 NCBI chr 1:255,660,165...255,842,671
Ensembl chr 1:255,665,238...255,815,733
JBrowse link
G Ctif cap binding complex dependent translation initiation factor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:71,467,381...71,701,423
Ensembl chr18:71,463,486...71,829,881
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:20116367 RGD:10401141 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:18596238), (PMID:22872150), (PMID:28842590) RGD PMID:18596238, PMID:22872150, PMID:28842590 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IDA
ISO
(PMID:23184662) RGD PMID:23184662, PMID:2390990 RGD:10401630 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IDA RGD PMID:20484009 RGD:11041876 NCBI chr11:84,080,273...84,090,259
Ensembl chr11:84,080,273...84,090,259
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C ISO UniProtKB:O15371|UniProtKB:P60228|UniProtKB:Q04637 (PMID:24092755) RGD PMID:24092755 NCBI chr 1:197,964,406...197,982,917
Ensembl chr 1:197,964,407...197,982,601
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D ISO UniProtKB:P60228|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E ISO UniProtKB:O15371|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:82,997,694...83,037,231 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO (PMID:18423201) RGD PMID:18423201 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 IMP RGD PMID:22514323 RGD:10755512 NCBI chr 1:175,883,362...175,895,510
Ensembl chr 1:175,883,363...175,895,510
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 ISO MGI:MGI:3512906 (MGI:MGI:4442992|PMID:20430745) RGD PMID:20430745 MGI:MGI:4442992 NCBI chr 5:156,343,663...156,564,037
Ensembl chr 5:156,396,695...156,564,037
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5699484|PMID:26383020)
Ensembl
UniProt
RGD
PMID:26383020 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5699484 NCBI chr 3:151,356,867...151,363,201
Ensembl chr 3:151,356,868...151,363,115
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (MGI:MGI:5287957|PMID:21613615)
(PMID:21613615)
RGD PMID:21613615 MGI:MGI:5287957 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Ep300 E1A binding protein p300 IMP increase in protein:DNA ratio RGD PMID:12477714 RGD:1298794 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO
ISS
(PMID:21555369)
GO_REF:0000024
RGD
UniProt
PMID:21555369 GO_REF:0000024 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO
IBA
ISS
IEA
(MGI:MGI:3831580|PMID:19166269)
PMID:21873635
(PMID:19097999), (PMID:19166269)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19097999, PMID:19166269, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3831580, RGD:13792537 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:120,529,716...120,570,356
Ensembl chr 2:120,512,899...120,570,355
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,237,814...56,257,877
Ensembl chr10:56,237,755...56,257,890
JBrowse link
G Guf1 GUF1 homolog, GTPase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:62,609,484...62,628,862
Ensembl chr14:62,609,484...62,628,862
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO
ISS
(PMID:24423872)
GO_REF:0000024
RGD
UniProt
PMID:24423872 GO_REF:0000024 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:19273590 RGD:9999430 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Il6 interleukin 6 ISO (PMID:16732314) RGD PMID:16732314 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Itga2 integrin subunit alpha 2 IMP osteocalcin RGD PMID:10867645 RGD:2307406 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Krt17 keratin 17 ISO (MGI:MGI:3625597|PMID:16710422) RGD PMID:16710422 MGI:MGI:3625597 NCBI chr10:88,158,993...88,163,712
Ensembl chr10:88,118,001...88,163,723
JBrowse link
G Larp4 La ribonucleoprotein 4 ISO (PMID:21098120) RGD PMID:21098120 NCBI chr 7:141,630,229...141,676,242 JBrowse link
G Larp4b La ribonucleoprotein 4B ISO (PMID:20573744) RGD PMID:20573744 NCBI chr17:63,236,007...63,317,298
Ensembl chr17:63,265,407...63,314,019
JBrowse link
G Larp6 La ribonucleoprotein 6, translational regulator ISO (PMID:21746880) RGD PMID:21746880 NCBI chr 8:65,611,570...65,632,706
Ensembl chr 8:65,611,570...65,632,706
JBrowse link
G Lin28a lin-28 homolog A ISO (MGI:MGI:3709663|PMID:17473174) RGD PMID:17473174 MGI:MGI:3709663 NCBI chr 5:152,230,343...152,247,873
Ensembl chr 5:152,230,343...152,247,332
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IMP RGD PMID:15027896 RGD:1626220 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 IMP RGD PMID:15027896 RGD:1626220 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (PMID:30559377) RGD PMID:30559377 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Mettl5 methyltransferase like 5 ISO (MGI:MGI:6436417|PMID:32217665) RGD PMID:32217665 MGI:MGI:6436417 NCBI chr 3:56,101,597...56,113,823
Ensembl chr 3:56,101,580...56,113,857
JBrowse link
G Mif4gd MIF4G domain containing IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:104,159,170...104,164,166
Ensembl chr10:104,159,173...104,163,634
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP
ISO
(PMID:18762023) RGD PMID:18762023, PMID:15525761 RGD:2307416 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nat10 N-acetyltransferase 10 ISO (PMID:30449621) RGD PMID:30449621 NCBI chr 3:93,658,119...93,698,136
Ensembl chr 3:93,658,117...93,698,136
JBrowse link
G Niban1 niban apoptosis regulator 1 ISO
ISS
(MGI:MGI:3716265|PMID:17588536)
GO_REF:0000024
RGD
UniProt
PMID:17588536 GO_REF:0000024, MGI:MGI:3716265 NCBI chr13:68,949,665...69,101,600
Ensembl chr13:68,949,665...69,101,588
JBrowse link
G Npm1 nucleophosmin 1 ISO
ISS
(PMID:12882984)
GO_REF:0000024
RGD
UniProt
PMID:12882984 GO_REF:0000024 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 ISO (PMID:31428936), (PMID:31722427) RGD PMID:31428936, PMID:31722427 NCBI chr12:24,341,940...24,346,900
Ensembl chr12:24,341,928...24,346,918
JBrowse link
G Otud6b OTU deubiquitinase 6B ISO (PMID:27864334) RGD PMID:27864334 NCBI chr 5:28,333,019...28,350,093
Ensembl chr 5:28,333,019...28,349,927
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:52,300,921...52,328,212
Ensembl chr 2:52,301,798...52,328,205
JBrowse link
G Pcif1 phosphorylated CTD interacting factor 1 ISO (PMID:30467178) RGD PMID:30467178 NCBI chr 3:161,343,883...161,356,815
Ensembl chr 3:161,343,883...161,356,815
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (MGI:MGI:5558956|PMID:24553947) RGD PMID:24553947 MGI:MGI:5558956 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 ISO (MGI:MGI:3842880|PMID:19114715) RGD PMID:19114715 MGI:MGI:3842880 NCBI chr15:52,037,693...52,116,277
Ensembl chr15:52,037,693...52,116,001
JBrowse link
G Pld1 phospholipase D1 IEA
ISO
GO_REF:0000107
(PMID:25361009)
Ensembl
RGD
PMID:25361009 GO_REF:0000107 NCBI chr 2:113,651,967...113,849,403
Ensembl chr 2:113,652,348...113,849,403
JBrowse link
G Plxnb2 plexin B2 ISO (PMID:29100074) RGD PMID:29100074 NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 ISO (PMID:18423201) RGD PMID:18423201 NCBI chr 7:123,992,167...124,020,596
Ensembl chr 7:123,992,167...124,020,574
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:MGI:6414739|PMID:32103174) RGD PMID:32103174 MGI:MGI:6414739 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Prr16 proline rich 16 ISO (PMID:24656129) RGD PMID:24656129 NCBI chr18:45,946,130...46,151,627 JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:8216700 RGD:10043166 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IMP RGD PMID:19273590 RGD:9999430 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:12890645 RGD:1642632 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Pym1 PYM homolog 1, exon junction complex associated factor ISO (PMID:18026120) RGD PMID:18026120 NCBI chr 7:3,172,798...3,193,994
Ensembl chr 7:3,173,287...3,193,994
JBrowse link
G Rbm3 RNA binding motif protein 3 IDA PMID:17403028 UniProt PMID:17403028 RGD:8554383 NCBI chr  X:15,098,880...15,102,344
Ensembl chr  X:15,098,904...15,102,340
JBrowse link
G Rbm4 RNA binding motif protein 4 ISO (MGI:MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:MGI:3703208 NCBI chr 1:220,038,403...220,049,756
Ensembl chr 1:220,039,734...220,048,966
JBrowse link
G Rbms3 RNA binding motif, single stranded interacting protein 3 ISO (MGI:MGI:5501019|PMID:22372950) RGD PMID:22372950 MGI:MGI:5501019 NCBI chr 8:124,833,804...125,645,895
Ensembl chr 8:124,661,839...125,645,898
JBrowse link
G Rhoa ras homolog family member A IEP RGD PMID:17562852 RGD:1642806 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rpl26 ribosomal protein L26 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:16213212) RGD PMID:16213212 NCBI chr14:2,860,963...2,867,397
Ensembl chr14:2,860,965...2,867,397
JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 IDA RGD PMID:9242705 RGD:11039477 NCBI chr 8:66,862,143...66,863,476
Ensembl chr 8:66,862,143...66,863,476
JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 IDA RGD PMID:9242705 RGD:11039477 NCBI chr 1:214,428,280...214,430,551
Ensembl chr 1:214,428,526...214,430,515
JBrowse link
G Rps27l ribosomal protein S27-like ISO (PMID:18056458) RGD PMID:18056458 NCBI chr 8:72,741,155...72,746,090
Ensembl chr 8:72,741,155...72,746,090
JBrowse link
G Rps3a ribosomal protein S3a IDA RGD PMID:8877097 RGD:11040965 NCBI chr 2:185,440,477...185,444,846
Ensembl chr 2:185,440,291...185,444,897
JBrowse link
G Rps4x ribosomal protein S4, X-linked ISO (PMID:1795030) RGD PMID:1795030 NCBI chr  X:72,074,108...72,078,551
Ensembl chr  X:72,074,108...72,078,551
Ensembl chr 4:72,074,108...72,078,551
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO (PMID:18423201) RGD PMID:18423201 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364
JBrowse link
G Samd4a sterile alpha motif domain containing 4A ISO
IEA
(PMID:16221671)
GO_REF:0000107
RGD
Ensembl
PMID:16221671 GO_REF:0000107 NCBI chr15:23,666,543...23,879,067
Ensembl chr15:23,665,202...23,878,539
JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 ISO MGI:MGI:3652355 (MGI:MGI:3619104|PMID:16415102) RGD PMID:16415102 MGI:MGI:3619104 NCBI chr 2:148,718,279...148,722,263
Ensembl chr 2:148,718,280...148,722,263
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (PMID:19234109) RGD PMID:19234109 NCBI chr17:37,615,022...37,619,728 JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IMP RGD PMID:17403780 RGD:10059417 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex ISO MGI:MGI:2445673 (MGI:MGI:1338603|PMID:10369260) RGD PMID:10369260 MGI:MGI:1338603 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:15700281) RGD PMID:15700281 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Ucn urocortin IDA RGD PMID:11087261 RGD:1642796 NCBI chr 6:26,602,144...26,602,974
Ensembl chr 6:26,602,144...26,602,974
JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay ISO
IBA
(PMID:16601204)
PMID:21873635
RGD PMID:16601204, PMID:21873635 RGD:13792537 NCBI chr16:81,521,084...81,532,512
Ensembl chr16:81,521,073...81,532,520
JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay ISO
IBA
(PMID:16601204)
PMID:21873635
RGD PMID:16601204, PMID:21873635 RGD:13792537 NCBI chr  X:123,713,327...123,731,431
Ensembl chr  X:123,713,339...123,731,385
JBrowse link
G Vim vimentin IEA
ISO
GO_REF:0000107
(PMID:21746880)
Ensembl
RGD
PMID:21746880 GO_REF:0000107 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 ISO (PMID:28106072), (PMID:28106076)
(MGI:MGI:6241448|PMID:30401835), (MGI:MGI:6281071|PMID:30728504), (MGI:MGI:6316558|PMID:30843071)
RGD PMID:28106072, PMID:28106076, PMID:30401835, PMID:30728504, PMID:30843071 MGI:MGI:6241448, MGI:MGI:6281071, MGI:MGI:6316558 NCBI chr 3:176,415,911...176,431,423
Ensembl chr 3:176,415,914...176,431,423
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 ISO (PMID:28106072) RGD PMID:28106072 NCBI chr 2:100,677,388...100,711,365
Ensembl chr 2:100,677,411...100,710,417
JBrowse link
G Zcchc4 zinc finger CCHC-type containing 4 ISS
ISO
GO_REF:0000024
(PMID:30531910), (PMID:31799605)
UniProt
RGD
PMID:30531910, PMID:31799605 GO_REF:0000024 NCBI chr14:60,511,494...60,553,167
Ensembl chr14:60,511,497...60,552,990
JBrowse link
positive regulation of cap-dependent translational initiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nck1 NCK adaptor protein 1 ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:108,787,797...108,847,779
Ensembl chr 8:108,787,798...108,847,779
JBrowse link
positive regulation of cap-independent translational initiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl3 methyltransferase-like 3 ISO (PMID:26593424) RGD PMID:26593424 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Nck1 NCK adaptor protein 1 ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:108,787,797...108,847,779
Ensembl chr 8:108,787,798...108,847,779
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 ISO (PMID:26458103) RGD PMID:26458103 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
positive regulation of cytoplasmic translation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030184.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:74,762,763...74,763,267 JBrowse link
G Cnbp CCHC-type zinc finger, nucleic acid binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,747,890...119,756,787
Ensembl chr 4:119,747,911...119,756,765
JBrowse link
G Dhx36 DEAH-box helicase 36 ISS
ISO
GO_REF:0000024
(PMID:26489465)
UniProt
RGD
PMID:26489465 GO_REF:0000024 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:16680162), (PMID:21247876), (PMID:22190748) RGD PMID:16680162, PMID:21247876, PMID:22190748 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IMP RGD PMID:19625250 RGD:10401254 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Lin28a lin-28 homolog A ISO (PMID:21247876) RGD PMID:21247876 NCBI chr 5:152,230,343...152,247,873
Ensembl chr 5:152,230,343...152,247,332
JBrowse link
G Pkm pyruvate kinase M1/2 ISS
ISO
GO_REF:0000024
(MGI:MGI:6331015|PMID:28575669)
UniProt
RGD
PMID:28575669 GO_REF:0000024, MGI:MGI:6331015 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722
JBrowse link
G Pkm_v1 pyruvate kinase M1/2, variant 1 ISS GO_REF:0000024 UniProt GO_REF:0000024
G Pkm_v2 pyruvate kinase M1/2, variant 2 ISS GO_REF:0000024 UniProt GO_REF:0000024
G Zcchc13 zinc finger CCHC-type containing 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:74,497,127...74,498,269
Ensembl chr  X:74,497,262...74,497,774
JBrowse link
positive regulation of mitochondrial translation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein ISO
IBA
ISS
(MGI:MGI:5487496|PMID:22904065)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22904065, PMID:21873635 GO_REF:0000024, MGI:MGI:5487496, RGD:13792537 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
JBrowse link
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 ISO MGI:MGI:5750452 (MGI:MGI:5635958|PMID:25738458) RGD PMID:25738458 MGI:MGI:5635958 NCBI chr 3:149,835,953...149,870,429
Ensembl chr 3:149,703,848...149,870,413
JBrowse link
G Coa3 cytochrome C oxidase assembly factor 3 ISO (PMID:23260140) RGD PMID:23260140 NCBI chr10:89,198,750...89,199,731
Ensembl chr10:89,198,749...89,199,736
JBrowse link
G Fastkd2 FAST kinase domains 2 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27667664)
UniProt
Ensembl
RGD
PMID:27667664 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:70,448,386...70,471,420
Ensembl chr 9:70,450,444...70,470,550
JBrowse link
G Fastkd3 FAST kinase domains 3 ISO
ISS
(PMID:27789713)
GO_REF:0000024
RGD
UniProt
PMID:27789713 GO_REF:0000024 NCBI chr 1:37,734,400...37,742,932
Ensembl chr 1:37,734,403...37,742,932
JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO (PMID:30215512) RGD PMID:30215512 NCBI chr 7:121,462,962...121,478,545
Ensembl chr 7:121,462,966...121,478,546
JBrowse link
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 ISO (PMID:24948607) RGD PMID:24948607 NCBI chr16:20,432,734...20,435,125
Ensembl chr16:20,432,899...20,435,974
JBrowse link
G Mrps27 mitochondrial ribosomal protein S27 ISO (PMID:22841715) RGD PMID:22841715 NCBI chr 2:29,598,344...29,666,711
Ensembl chr 2:29,598,344...29,666,724
JBrowse link
G Ngrn neugrin, neurite outgrowth associated ISS
ISO
GO_REF:0000024
(PMID:27667664)
UniProt
RGD
PMID:27667664 GO_REF:0000024 NCBI chr 1:142,050,458...142,056,336
Ensembl chr 1:142,050,458...142,056,336
JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 ISO (MGI:MGI:5573024|PMID:24516400) RGD PMID:24516400 MGI:MGI:5573024 NCBI chr 5:134,885,377...134,905,492
Ensembl chr 5:134,886,497...134,905,588
JBrowse link
G Rcc1l RCC1 like ISO (PMID:27667664) RGD PMID:27667664 NCBI chr12:25,561,871...25,592,337
Ensembl chr12:25,561,777...25,592,342
JBrowse link
G Rmnd1 required for meiotic nuclear division 1 homolog ISO
IBA
(PMID:25604853)
PMID:21873635
RGD PMID:25604853, PMID:21873635 RGD:13792537 NCBI chr 1:40,948,843...40,982,669
Ensembl chr 1:40,948,847...40,972,826
JBrowse link
G Rpusd3 RNA pseudouridine synthase D3 ISO (PMID:27667664) RGD PMID:27667664 NCBI chr 4:145,361,937...145,370,992
Ensembl chr 4:145,366,765...145,370,992
JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 ISS
ISO
GO_REF:0000024
(PMID:27667664)
UniProt
RGD
PMID:27667664 GO_REF:0000024 NCBI chr 8:36,467,706...36,477,190
Ensembl chr 8:36,467,706...36,477,189
JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ISO
ISS
(PMID:27132592)
GO_REF:0000024
RGD
UniProt
PMID:27132592 GO_REF:0000024 NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 ISS
ISO
GO_REF:0000024
(PMID:27667664)
UniProt
RGD
PMID:27667664 GO_REF:0000024 NCBI chr 3:8,338,479...8,348,746
Ensembl chr 3:8,338,484...8,348,746
JBrowse link
G Uqcc1 ubiquinol-cytochrome c reductase complex assembly factor 1 ISO
IBA
(PMID:24385928)
PMID:21873635
RGD PMID:24385928, PMID:21873635 RGD:13792537 NCBI chr 3:151,384,965...151,474,112
Ensembl chr 3:151,384,954...151,474,135
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 ISO
ISS
(PMID:24385928)
GO_REF:0000024
RGD
UniProt
PMID:24385928 GO_REF:0000024 NCBI chr20:5,712,200...5,723,902
Ensembl chr20:5,712,203...5,723,902
JBrowse link
positive regulation of selenocysteine incorporation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl30 ribosomal protein L30 IDA RGD PMID:15821744 RGD:11038818 NCBI chr 7:73,213,538...73,216,431
Ensembl chr 7:73,213,581...73,216,251
JBrowse link
G Secisbp2 SECIS binding protein 2 IDA RGD PMID:15821744 RGD:11038818 NCBI chr17:13,555,348...13,586,595
Ensembl chr17:13,555,349...13,586,554
JBrowse link
positive regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:29062139) RGD PMID:29062139 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:29062139) RGD PMID:29062139 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Nck1 NCK adaptor protein 1 ISO (PMID:14676213)
UniProtKB:O55033 (MGI:MGI:5613478|PMID:14676213)
RGD PMID:14676213 MGI:MGI:5613478 NCBI chr 8:108,787,797...108,847,779
Ensembl chr 8:108,787,798...108,847,779
JBrowse link
G Nck2 NCK adaptor protein 2 ISO UniProtKB:Q99M51 (MGI:MGI:5613478|PMID:14676213) RGD PMID:14676213 MGI:MGI:5613478 NCBI chr 9:50,246,767...50,373,307
Ensembl chr 9:50,247,692...50,373,284
JBrowse link
positive regulation of translation in response to stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc35a4 solute carrier family 35, member A4 ISO (PMID:25621764) RGD PMID:25621764 NCBI chr18:29,505,239...29,509,304
Ensembl chr18:29,506,128...29,509,296
JBrowse link
positive regulation of translation initiation in response to endoplasmic reticulum stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ISO
ISS
(MGI:MGI:5617428|PMID:25329545)
GO_REF:0000024
RGD
UniProt
PMID:25329545 GO_REF:0000024, MGI:MGI:5617428 NCBI chr15:104,186,918...104,226,236
Ensembl chr15:104,186,792...104,226,329
JBrowse link
positive regulation of translation, ncRNA-mediated term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 ISO RNAcentral:URS0000134ADC_9606 (PMID:30470799) RGD PMID:30470799 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
positive regulation of translational elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,527,075...56,531,615
Ensembl chr10:56,527,085...56,531,483
JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:115,336,646...115,354,203
Ensembl chr 2:115,337,439...115,354,203
JBrowse link
G Rpl12 ribosomal protein L12 IDA RGD PMID:11729183 RGD:11035234 NCBI chr 3:12,009,578...12,011,952
Ensembl chr 3:12,009,578...12,011,666
JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO
ISS
(PMID:20550933)
GO_REF:0000024
RGD
UniProt
PMID:20550933 GO_REF:0000024 NCBI chr11:27,101,213...27,130,345
Ensembl chr11:27,101,227...27,130,341
JBrowse link
positive regulation of translational fidelity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07040892.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:113,227,684...113,228,265 JBrowse link
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 ISO NCBI_Gene:945260 (MGI:MGI:5635958|PMID:25738458) RGD PMID:25738458 MGI:MGI:5635958 NCBI chr 3:149,835,953...149,870,429
Ensembl chr 3:149,703,848...149,870,413
JBrowse link
G Eif2s3 eukaryotic translation initiation factor 2 subunit gamma IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:63,268,106...63,291,125
Ensembl chr  X:63,268,037...63,292,092
JBrowse link
G Eif2s3y eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:914,062...933,699
Ensembl chr  Y:914,045...933,699
JBrowse link
G LOC100364509 ribosomal protein S9-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:61,873,869...61,874,544
Ensembl chr16:61,873,898...61,874,470
JBrowse link
G RGD1566136 similar to 40S ribosomal protein S9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:113,227,678...113,228,313 JBrowse link
G Rps9 ribosomal protein S9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,086,625...64,090,023
Ensembl chr 1:64,018,125...64,090,021
JBrowse link
G Rps9l1 ribosomal protein S9-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,018,325...64,021,723
Ensembl chr 1:64,018,125...64,090,021
JBrowse link
positive regulation of translational initiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027799.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:44,418,972...44,420,596 JBrowse link
G Boll boule homolog, RNA binding protein ISO
IBA
(PMID:16001084)
PMID:21873635
RGD PMID:16001084, PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G Dazl deleted in azoospermia-like ISO
IBA
(PMID:16001084)
PMID:21873635
(MGI:MGI:3689792|PMID:16001084)
RGD PMID:16001084, PMID:21873635 MGI:MGI:3689792, RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:20837705) RGD PMID:20837705 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Dhx29 DExH-box helicase 29 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:44,787,066...44,837,834
Ensembl chr 2:44,787,002...44,837,831
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:84,080,273...84,090,259
Ensembl chr11:84,080,273...84,090,259
JBrowse link
G Habp4 hyaluronan binding protein 4 ISO
IBA
ISS
(PMID:21771594)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21771594, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:1,679,561...1,702,245
Ensembl chr17:1,679,627...1,701,623
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ISO
ISS
(PMID:21613532)
GO_REF:0000024
RGD
UniProt
PMID:21613532 GO_REF:0000024 NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:29244122) RGD PMID:29244122 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G LOC108348134 protein boule-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:64,447,890...64,573,812
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G Polr2d RNA polymerase II subunit D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:24,570,762...24,577,894
Ensembl chr18:24,570,762...24,577,894
JBrowse link
G Polr2g RNA polymerase II subunit G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:224,991,250...224,998,355
Ensembl chr 1:224,991,222...224,994,653
JBrowse link
G RGD1561897 similar to Serine/threonine-protein kinase Kist (Kinase interacting with stathmin) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,418,463...44,420,729 JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO (PMID:16763566) RGD PMID:16763566 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364
JBrowse link
G Rps6kb2 ribosomal protein S6 kinase B2 ISO (PMID:16763566) RGD PMID:16763566 NCBI chr 1:219,406,201...219,412,888
Ensembl chr 1:219,406,202...219,412,888
JBrowse link
G Uhmk1 U2AF homology motif kinase 1 ISO
IBA
(MGI:MGI:3835232|PMID:19015237)
PMID:21873635
RGD PMID:19015237, PMID:21873635 MGI:MGI:3835232, RGD:13792537 NCBI chr13:88,521,625...88,536,728
Ensembl chr13:88,521,625...88,536,728
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 ISO
IBA
(PMID:26046440)
PMID:21873635
RGD PMID:26046440, PMID:21873635 RGD:13792537 NCBI chr 3:176,415,911...176,431,423
Ensembl chr 3:176,415,914...176,431,423
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 ISO
IBA
(PMID:28106076)
PMID:21873635
RGD PMID:28106076, PMID:21873635 RGD:13792537 NCBI chr 2:100,677,388...100,711,365
Ensembl chr 2:100,677,411...100,710,417
JBrowse link
positive regulation of translational initiation by iron term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha ISO
IEA
MGI:MGI:1201686 (MGI:MGI:5538466|PMID:23775127)
GO_REF:0000107
RGD
Ensembl
PMID:23775127 GO_REF:0000107, MGI:MGI:5538466 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:MGI:2152007|PMID:11588035) RGD PMID:11588035 MGI:MGI:2152007 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:2149467|PMID:10655230), (MGI:MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:10655230, PMID:16121183 GO_REF:0000024, MGI:MGI:2149467, MGI:MGI:3589053 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Impact impact RWD domain protein ISO
IBA
ISS
(MGI:MGI:5494763|PMID:23447528)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23447528, PMID:21873635 GO_REF:0000024, MGI:MGI:5494763, RGD:13792537 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
positive regulation of translational termination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:56,527,075...56,531,615
Ensembl chr10:56,527,085...56,531,483
JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:115,336,646...115,354,203
Ensembl chr 2:115,337,439...115,354,203
JBrowse link
G Jmjd4 jumonji domain containing 4 ISO (PMID:24486019) RGD PMID:24486019 NCBI chr10:45,798,964...45,804,188
Ensembl chr10:45,798,797...45,804,541
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      biosynthetic process 6225
        positive regulation of biosynthetic process 2171
          positive regulation of macromolecule biosynthetic process 2010
            positive regulation of translation 152
              negative regulation of miRNA mediated inhibition of translation 0
              positive regulation of cytoplasmic translation + 13
              positive regulation of mitochondrial translation + 18
              positive regulation of oskar mRNA translation 0
              positive regulation of translation in response to stress + 8
              positive regulation of translation, ncRNA-mediated 1
              positive regulation of translational elongation + 6
              positive regulation of translational fidelity 8
              positive regulation of translational initiation + 26
              positive regulation of translational termination 3
Path 2
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      nitrogen compound metabolic process 10390
        cellular nitrogen compound metabolic process 6696
          cellular amide metabolic process 1533
            peptide metabolic process 1271
              peptide biosynthetic process 1117
                translation 1099
                  regulation of translation 382
                    positive regulation of translation 152
                      negative regulation of miRNA mediated inhibition of translation 0
                      positive regulation of cytoplasmic translation + 13
                      positive regulation of mitochondrial translation + 18
                      positive regulation of oskar mRNA translation 0
                      positive regulation of translation in response to stress + 8
                      positive regulation of translation, ncRNA-mediated 1
                      positive regulation of translational elongation + 6
                      positive regulation of translational fidelity 8
                      positive regulation of translational initiation + 26
                      positive regulation of translational termination 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.