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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of nucleobase-containing compound metabolic process
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Accession:GO:0045934 term browser browse the term
Definition:Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
Synonyms:exact_synonym: down regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   downregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
 narrow_synonym: inhibition of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
 related_synonym: negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process


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3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO
IBA
(PMID:22547059)
PMID:21873635
RGD PMID:22547059, PMID:21873635 RGD:13792537 NCBI chr13:109,505,021...109,520,976
Ensembl chr13:109,505,697...109,520,419
JBrowse link
G Boll boule homolog, RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G Dazl deleted in azoospermia-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISS
ISO
GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288, PMID:19029303, PMID:26489465, PMID:27616329, PMID:29180010 GO_REF:0000024, MGI:6105829 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G LOC108348134 protein boule-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:64,447,890...64,573,812
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G LOC681410 hypothetical protein LOC681410 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,909,166...6,912,145
Ensembl chr17:6,909,728...6,910,630
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288, PMID:15014438, PMID:20932473 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Rbm10 RNA binding motif protein 10 IEA
ISO
GO_REF:0000107
(MGI:4367529|PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107, MGI:4367529 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978
JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Zfp36 zinc finger protein 36 ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07062859.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:11,859,630...11,860,001 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Ctbp1 C-terminal binding protein 1 IEA
ISO
GO_REF:0000107
(PMID:21102443)
Ensembl
RGD
PMID:21102443 GO_REF:0000107 NCBI chr14:82,762,109...82,789,350
Ensembl chr14:82,762,190...82,789,319
JBrowse link
G Eed embryonic ectoderm development IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:154,189,252...154,216,340
Ensembl chr 1:154,189,260...154,216,340
JBrowse link
G H1f0 H1 histone family, member 0 ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H2ac1 H2A clustered histone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,422,454...43,422,846
Ensembl chr17:43,422,454...43,422,846
JBrowse link
G H2ac12 H2A clustered histone 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,527,990...44,528,557
Ensembl chr17:44,528,125...44,528,511
JBrowse link
G H2ac20 H2A clustered histone 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,360,271...198,360,735
Ensembl chr 2:198,360,301...198,360,678
JBrowse link
G H2ac21 H2A clustered histone 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,359,754...198,360,146
Ensembl chr 2:198,359,754...198,360,146
JBrowse link
G H2afb3 H2A histone family, member B3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:88,602,135...88,602,485
Ensembl chr  X:88,602,135...88,602,485
JBrowse link
G H2aj H2A.J histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,766,900...170,767,384
Ensembl chr 4:170,766,900...170,767,382
JBrowse link
G H2ax H2A.X variant histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G H2az1 H2A.Z variant histone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H2az2 H2A.Z variant histone 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,687,782...86,706,639
Ensembl chr14:86,687,782...86,706,626
JBrowse link
G Hells helicase, lymphoid specific ISO MGI:2178586 (MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:3510059 NCBI chr 1:257,901,856...257,953,889
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
G Hist1h2ac histone cluster 1 H2A family member C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,520,484...44,521,142
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2af histone cluster 1 H2A family member F IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,627,237...43,627,629
Ensembl chr17:43,627,237...43,627,629
JBrowse link
G Hist1h2ah histone cluster 1 H2A family member H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,632,354...43,632,851
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G Hist1h2ai histone cluster 1, H2ai IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,758,412...44,759,675
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G hist1h2ail2 histone cluster 1, H2ai-like2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,794,087...44,794,563
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ak histone cluster 1, H2ak IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,840,990...44,841,382
Ensembl chr17:44,840,990...44,841,382
JBrowse link
G Hist1h2an histone cluster 1, H2an IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,779,174...43,779,775
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ao histone cluster 1, H2ao IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,744,534...44,744,931
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Hist2h2aa2 histone cluster 2 H2A family member A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,381,678...198,382,247
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist2h2aa3 histone cluster 2 H2A family member A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,388,766...198,389,293
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist3h2a histone cluster 3, H2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,297,603...45,299,155 JBrowse link
G Hmgb1 high mobility group box 1 ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hypm huntingtin interacting protein M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,989,401...13,989,955
Ensembl chr  X:13,989,401...13,989,955
JBrowse link
G Kdm1a lysine demethylase 1A ISO (MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:4461095 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Kmt2d lysine methyltransferase 2D ISO (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 7:140,507,137...140,542,479
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
G LOC100363125 rCG42854-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,991,860...13,992,606
Ensembl chr  X:13,992,064...13,992,429
JBrowse link
G LOC100910554 histone H2A type 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,738,552...44,739,195
Ensembl chr17:44,738,643...44,739,035
JBrowse link
G LOC103690002 histone H2A.J IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,148,955...170,149,479
Ensembl chr 4:170,149,029...170,149,418
JBrowse link
G LOC103690190 histone H2A type 1-E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,747,686...44,748,229
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G LOC103692167 polycomb group RING finger protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,776,680...114,779,447
Ensembl chr 4:114,776,797...114,779,446
JBrowse link
G LOC680063 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC684773 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,777,353...43,777,827
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Macroh2a1 macroH2A.1 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Macroh2a2 macroH2A.2 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:31,352,924...31,402,483
Ensembl chr20:31,352,960...31,402,483
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO MGI:2137311 (MGI:3530434|PMID:15608638) RGD PMID:15608638 MGI:3530434 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Morf4l1 mortality factor 4 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:97,473,454...97,494,974
Ensembl chr 8:97,474,092...97,494,834
JBrowse link
G Morf4l2 mortality factor 4 like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:107,394,468...107,405,564
Ensembl chr  X:107,394,486...107,405,564
JBrowse link
G Msl3 MSL complex subunit 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:27,015,826...27,033,562
Ensembl chr  X:27,015,884...27,033,555
JBrowse link
G Msl3l2 male-specific lethal 3-like 2 (Drosophila) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:37,580,002...37,590,015
Ensembl chr20:37,587,687...37,589,198
JBrowse link
G Pcgf1 polycomb group ring finger 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,911,129...113,913,718
Ensembl chr 4:113,910,685...113,913,687
JBrowse link
G Pcgf2 polycomb group ring finger 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D ISO (MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:5551345 NCBI chr10:72,909,550...72,945,884
Ensembl chr10:72,909,550...72,945,884
JBrowse link
G RGD1562306 similar to H2A histone family, member Z IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:11,859,622...11,860,016 JBrowse link
G RGD1562871 similar to BMI1-like protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:79,546,624...79,547,767
Ensembl chr  X:79,546,624...79,547,767
JBrowse link
G Tnp1 transition protein 1 ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:80,294,837...80,295,446
Ensembl chr 9:80,294,840...80,295,446
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 ISO
IBA
(MGI:4431162|PMID:20080676)
PMID:21873635
RGD PMID:20080676, PMID:21873635 MGI:4431162, RGD:13792537 NCBI chr 9:16,003,058...16,080,152
Ensembl chr 9:16,003,058...16,080,152
JBrowse link
chromatin silencing at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dot1l DOT1 like histone lysine methyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,786,105...11,824,742
Ensembl chr 7:11,786,105...11,824,742
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:22,296,128...22,316,894
Ensembl chr 6:22,296,128...22,316,894
JBrowse link
G Dydc1 DPY30 domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,648,030...18,667,962
Ensembl chr16:18,648,866...18,667,968
JBrowse link
G Dydc2 DPY30 domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,635,235...18,649,074
Ensembl chr16:18,635,388...18,645,941
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO UniProtKB:P38827 (MGI:892875|PMID:9214638) RGD PMID:9214638 MGI:892875 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Hat1 histone acetyltransferase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:58,022,395...58,070,067
Ensembl chr 3:58,022,238...58,070,068
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (MGI:5584328|PMID:24735877) RGD PMID:24735877 MGI:5584328 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:19029303)
GO_REF:0000024
RGD
UniProt
PMID:19029303 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO MGI:1261819 (MGI:3611125|PMID:16322236), (MGI:3768461|PMID:17938196) RGD PMID:16322236, PMID:17938196 MGI:3611125, MGI:3768461 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO MGI:1261827 (MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:3768461 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hells helicase, lymphoid specific ISO
IBA
(MGI:3573964|PMID:15647320)
PMID:21873635
RGD PMID:15647320, PMID:21873635 MGI:3573964, RGD:13792537 NCBI chr 1:257,901,856...257,953,889
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G LOC100911660 lymphocyte-specific helicase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:257,614,688...257,660,184
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO UniProtKB:Q13547 (PMID:23770133) RGD PMID:23770133 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 7:12,179,046...12,186,251
Ensembl chr 7:12,179,203...12,186,656
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,772,096...26,772,732 JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 ISO (PMID:19666599) RGD PMID:19666599 NCBI chr 3:110,708,790...110,732,038
Ensembl chr 3:110,723,481...110,732,060
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A ISO (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) RGD PMID:16678107, PMID:20168299 MGI:3653583, MGI:4462332 NCBI chr 7:2,518,267...2,548,840
Ensembl chr 7:2,529,077...2,547,062
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO (MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:3820717 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:16901784)
GO_REF:0000024
RGD
UniProt
PMID:16901784 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:118,816,053...118,816,725
Ensembl chr 7:118,816,218...118,816,655
Ensembl chr 5:118,816,218...118,816,655
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:78,380,813...78,384,047
Ensembl chr 5:78,380,816...78,384,047
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:15469825) RGD PMID:15469825 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:4,942,795...5,547,744
Ensembl chr 2:4,942,775...5,545,144
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:163,787,101...163,847,671
Ensembl chr 3:163,787,101...163,847,671
JBrowse link
heterochromatin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO (MGI:5578697|PMID:24335282) RGD PMID:24335282 MGI:5578697 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Hdac2 histone deacetylase 2 ISO (PMID:19372552) RGD PMID:19372552 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO (PMID:24769206) RGD PMID:24769206 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Sirt1 sirtuin 1 ISO
IEA
(PMID:15469825)
GO_REF:0000107
RGD
Ensembl
PMID:15469825 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO MGI:2183933 (MGI:3720437|PMID:17488778) RGD PMID:17488778 MGI:3720437 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 ISO (MGI:5317038|PMID:21266480) RGD PMID:21266480 MGI:5317038 NCBI chr15:24,021,674...24,056,073
Ensembl chr15:24,021,674...24,056,073
JBrowse link
heterochromatin organization involved in chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (MGI:5532809|PMID:23754746), (MGI:5803776|PMID:26391951) RGD PMID:23754746, PMID:26391951 MGI:5532809, MGI:5803776 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (MGI:5532809|PMID:23754746) RGD PMID:23754746 MGI:5532809 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Axin2 axin 2 ISO
IEA
(PMID:17072303)
GO_REF:0000107
RGD
Ensembl
PMID:17072303 GO_REF:0000107 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:3589208 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212
JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) RGD PMID:15766563 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285, PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO
ISS
(PMID:19029303), (PMID:21613615), (PMID:31358969)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615), (MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837)
GO_REF:0000024
RGD
UniProt
PMID:14976220, PMID:19029303, PMID:21613615, PMID:24394384, PMID:27609837, PMID:31358969 GO_REF:0000024, MGI:3037407, MGI:5287957, MGI:5559905, MGI:5922838 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Fus FUS RNA binding protein ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:199,412,805...199,426,705
Ensembl chr 1:199,412,834...199,426,702
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
ISS
IEA
(PMID:12358785)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12358785 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:15192077 RGD:1357938 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091, PMID:28673543 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO MGI:2179724 (MGI:2158083|PMID:11741878) RGD PMID:11741878 MGI:2158083 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO
IBA
(MGI:5770021|PMID:26742488)
PMID:21873635
RGD PMID:26742488, PMID:21873635 MGI:5770021, RGD:13792537 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Noct nocturnin ISS
ISO
GO_REF:0000024
(MGI:5308514|PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024, MGI:5308514 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Qk quaking IMP RGD PMID:16855020 RGD:10045995 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:5644240|PMID:25397698) RGD PMID:25397698 MGI:5644240 NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223
JBrowse link
G Slc11a1 solute carrier family 11 member 1 IEA
ISO
GO_REF:0000107
MGI:1857755 (MGI:85148|PMID:9009318)
Ensembl
RGD
PMID:9009318 GO_REF:0000107, MGI:85148 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:92,935,474...92,942,267
Ensembl chr 8:92,937,739...92,942,076
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:151,692,068...151,699,381
Ensembl chr 5:151,692,108...151,700,246
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5926094|PMID:28931820)
(PMID:28931820)
UniProt
RGD
PMID:28931820, PMID:21873635 GO_REF:0000024, MGI:5926094, RGD:13792537 NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,911,641...78,994,467
Ensembl chr  X:78,991,223...78,992,735
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO
ISS
(PMID:18794151)
GO_REF:0000024
RGD
UniProt
PMID:18794151 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vip vasoactive intestinal peptide ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:31358969)
GO_REF:0000024
RGD
UniProt
PMID:31358969 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Ybx2 Y box binding protein 2 ISO MGI:3576937 (MGI:3696301|PMID:17035640) RGD PMID:17035640 MGI:3696301 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha ISO (PMID:15572351)
MGI:2179456 (MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
RGD PMID:10601318, PMID:14663139, PMID:15572351 MGI:2182584, MGI:3029597 NCBI chr 5:165,922,893...165,935,822
Ensembl chr 5:165,922,915...165,935,821
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:166,409,460...166,430,291
Ensembl chr 5:166,409,461...166,430,254
JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936
JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IMP RGD PMID:21325440 RGD:9685453 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Flcn folliculin ISS
ISO
GO_REF:0000024
(MGI:5463828|PMID:23150719)
UniProt
RGD
PMID:23150719 GO_REF:0000024, MGI:5463828 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (PMID:20165904) RGD PMID:20165904 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
negative regulation of chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad2 ATPase family, AAA domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:97,984,754...98,027,379
Ensembl chr 7:97,984,862...98,026,052
JBrowse link
G Atad2b ATPase family, AAA domain containing 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,998,080...29,066,850
Ensembl chr 6:29,012,007...29,163,134
JBrowse link
G H1f0 H1 histone family, member 0 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H1f1 H1.1 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G H1f10 H1.10 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,889,016...119,892,661
Ensembl chr 4:119,889,371...119,889,949
JBrowse link
G H1f2 H1.2 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,638,938...43,640,445
Ensembl chr17:43,639,749...43,640,387
JBrowse link
G H1f4 H1.4 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,734,461...43,735,120
Ensembl chr17:43,734,461...43,735,120
JBrowse link
G H1f5 H1.5 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H1f6 H1.6 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H1f8 H1.8 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,844,658...147,849,779
Ensembl chr 4:147,844,658...147,849,779
JBrowse link
G H4f3 H1.3 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,797,711...43,798,450
Ensembl chr17:43,797,721...43,798,383
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456
JBrowse link
negative regulation of deoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha ISO (PMID:19944011) RGD PMID:19944011 NCBI chr 5:165,922,893...165,935,822
Ensembl chr 5:165,922,915...165,935,821
JBrowse link
negative regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:12070119)
GO_REF:0000024
RGD
UniProt
PMID:12070119 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:11139470) RGD PMID:11139470 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:11595739) RGD PMID:11595739 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Chek1 checkpoint kinase 1 IMP RGD PMID:12429946 RGD:2316115 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Dach1 dachshund family transcription factor 1 ISO (PMID:16980615) RGD PMID:16980615 NCBI chr15:82,095,003...82,482,272
Ensembl chr15:82,099,159...82,482,009
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 IEA
ISO
GO_REF:0000107
(MGI:76992|PMID:7559602)
Ensembl
RGD
PMID:7559602 GO_REF:0000107, MGI:76992 NCBI chr 4:9,881,505...9,908,693
Ensembl chr 4:9,882,904...9,908,689
JBrowse link
G Dusp1 dual specificity phosphatase 1 IDA RGD PMID:10446064 RGD:7771571 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:14702389 RGD:8662403 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:23271285 RGD:9831181 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Niban2 niban apoptosis regulator 2 ISO (PMID:14602737), (PMID:17569660), (PMID:20032057) RGD PMID:14602737, PMID:17569660, PMID:20032057 NCBI chr 3:11,921,715...11,971,327
Ensembl chr 3:11,921,715...11,971,327
JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:12746286 RGD:1580115 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Rgn regucalcin IMP RGD PMID:11500948 RGD:9590199 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:11502571 RGD:70312 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
negative regulation of DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015759.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:74,094,670...74,095,146 JBrowse link
G AABR07017902.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:32,412,245...32,412,709 JBrowse link
G AABR07026842.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:2,920,610...2,921,083 JBrowse link
G AABR07058017.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:98,734,716...98,735,192 JBrowse link
G AABR07061871.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:150,199,627...150,200,088 JBrowse link
G Dppa3 developmental pluripotency-associated 3 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5432962|PMID:22722204), (MGI:5447615|PMID:17143267), (MGI:5465527|PMID:21407207)
UniProt
RGD
PMID:17143267, PMID:21407207, PMID:22722204, PMID:21873635 GO_REF:0000024, MGI:5432962, MGI:5447615, MGI:5465527, RGD:13792537 NCBI chr 4:155,437,675...155,441,059
Ensembl chr 3:111,298,713...111,299,189
Ensembl chr 4:111,298,713...111,299,189
JBrowse link
G Dppa3l1 developmental pluripotency associated 3-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:60,683,180...60,683,658
Ensembl chr 8:60,683,183...60,683,632
JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:3046385|PMID:15087456) RGD PMID:15087456 MGI:3046385 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G LOC679766 similar to developmental pluripotency-associated 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:74,094,652...74,095,296 JBrowse link
G Trim28 tripartite motif-containing 28 ISO MGI:1928907 (MGI:5319411|PMID:22495301) RGD PMID:22495301 MGI:5319411 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
negative regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 IDA PMID:23283935 UniProt PMID:23283935 RGD:8553898 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Sub1 SUB1 regulator of transcription ISO (PMID:28369605) RGD PMID:28369605 NCBI chr 2:62,019,902...62,034,704
Ensembl chr 2:62,022,567...62,034,628
JBrowse link
negative regulation of DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3l DNA methyltransferase 3 like ISS
ISO
IEA
GO_REF:0000024
(MGI:5553039|PMID:24074865)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24074865 GO_REF:0000024, GO_REF:0000107, MGI:5553039 NCBI chr20:11,344,513...11,359,090
Ensembl chr20:11,344,514...11,359,090
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO (PMID:20010842) RGD PMID:20010842 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
negative regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase ISO (PMID:21496894) RGD PMID:21496894 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISS
ISO
GO_REF:0000024
(MGI:5285126|PMID:21496894)
UniProt
RGD
PMID:21496894 GO_REF:0000024, MGI:5285126 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO (PMID:21496894) RGD PMID:21496894 NCBI chr20:27,359,122...27,438,039
Ensembl chr20:27,366,213...27,437,427
JBrowse link
negative regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase ISO (PMID:9671747) RGD PMID:9671747 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G H1f0 H1 histone family, member 0 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H1f1 H1.1 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G H1f10 H1.10 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,889,016...119,892,661
Ensembl chr 4:119,889,371...119,889,949
JBrowse link
G H1f2 H1.2 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,638,938...43,640,445
Ensembl chr17:43,639,749...43,640,387
JBrowse link
G H1f4 H1.4 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,734,461...43,735,120
Ensembl chr17:43,734,461...43,735,120
JBrowse link
G H1f5 H1.5 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H1f6 H1.6 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H1f8 H1.8 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,844,658...147,849,779
Ensembl chr 4:147,844,658...147,849,779
JBrowse link
G H4f3 H1.3 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,797,711...43,798,450
Ensembl chr17:43,797,721...43,798,383
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
G Lig3 DNA ligase 3 ISO MGI:3629052 (MGI:3625660|PMID:16648486) RGD PMID:16648486 MGI:3625660 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Msh2 mutS homolog 2 ISO
IBA
IEA
(PMID:17715146)
PMID:21873635
MGI:1858055 (MGI:1351797|PMID:10545954), (MGI:74950|PMID:7628020)
GO_REF:0000107
RGD
Ensembl
PMID:7628020, PMID:10545954, PMID:17715146, PMID:21873635 GO_REF:0000107, MGI:1351797, MGI:74950, RGD:13792537 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh3 mutS homolog 3 ISO (PMID:17715146) RGD PMID:17715146 NCBI chr 2:21,790,048...21,931,791
Ensembl chr 2:21,790,044...21,931,720
JBrowse link
G Msh6 mutS homolog 6 ISO
IBA
(PMID:17715146)
PMID:21873635
MGI:2151803 (MGI:1351797|PMID:10545954)
RGD PMID:10545954, PMID:17715146, PMID:21873635 MGI:1351797, RGD:13792537 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase ISO MGI:3835812 (MGI:2448116|PMID:12509447) RGD PMID:12509447 MGI:2448116 NCBI chr 4:144,537,329...144,620,606
Ensembl chr 4:144,536,729...144,620,731
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 ISO
IBA
(MGI:5645200|PMID:22579284)
PMID:21873635
RGD PMID:22579284, PMID:21873635 MGI:5645200, RGD:13792537 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 ISO (PMID:22704558) RGD PMID:22704558 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
negative regulation of DNA recombination at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1b protection of telomeres 1B IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Terf2ip TERF2 interacting protein ISS
ISO
GO_REF:0000024
(MGI:4440768|PMID:20339076), (MGI:4839412|PMID:20622869)
UniProt
RGD
PMID:20339076, PMID:20622869 GO_REF:0000024, MGI:4440768, MGI:4839412 NCBI chr19:44,231,317...44,238,406
Ensembl chr19:44,231,251...44,238,404
JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps3 ribosomal protein S3 ISO (PMID:17049931) RGD PMID:17049931 NCBI chr 1:164,435,868...164,441,167
Ensembl chr 1:164,435,878...164,441,167
JBrowse link
negative regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit ISO (PMID:9450929), (PMID:9857195) RGD PMID:9450929, PMID:9857195 NCBI chr10:75,032,365...75,038,547
Ensembl chr10:75,032,365...75,038,547
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO (PMID:10075709), (PMID:9450929) RGD PMID:9450929, PMID:10075709 NCBI chr 1:85,437,780...85,466,854
Ensembl chr 1:85,437,780...85,466,854
JBrowse link
negative regulation of DNA-templated transcription, initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Morc1 MORC family CW-type zinc finger 1 ISO MGI:1857787 (MGI:5694015|PMID:25503965) RGD PMID:25503965 MGI:5694015 NCBI chr11:54,762,654...55,044,581
Ensembl chr11:54,762,654...55,044,581
JBrowse link
G Thra thyroid hormone receptor alpha ISO (PMID:8524305) RGD PMID:8524305 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
negative regulation of DNA-templated transcription, termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Per2 period circadian regulator 2 ISO (MGI:5430667|PMID:22767893) RGD PMID:22767893 MGI:5430667 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO
IBA
ISS
(PMID:20725033)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20725033, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:222,451,674...222,459,952
Ensembl chr 1:222,451,674...222,459,952
JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:127,282,445...127,301,086
Ensembl chr 6:127,282,466...127,301,083
JBrowse link
G Rnf169 ring finger protein 169 ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721, PMID:22733822, PMID:22742833 NCBI chr 1:164,917,069...164,978,061
Ensembl chr 1:164,922,080...164,977,633
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:92,305,059...92,435,388
Ensembl chr 9:92,305,051...92,435,365
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase ISO
IBA
(PMID:30356214)
PMID:21873635
(MGI:6241455|PMID:30356214)
RGD PMID:30356214, PMID:21873635 MGI:6241455, RGD:13792537 NCBI chr 8:85,789,515...85,804,008
Ensembl chr 8:85,789,763...85,803,433
JBrowse link
G Fancb FA complementation group B ISO
IBA
MGI:2156841 (MGI:5648586|PMID:25520194)
PMID:21873635
RGD PMID:25520194, PMID:21873635 MGI:5648586, RGD:13792537 NCBI chr  X:31,124,018...31,140,790
Ensembl chr  X:31,124,018...31,140,711
JBrowse link
G Fbh1 F-box DNA helicase 1 ISO (PMID:19736316)
(MGI:5566975|PMID:24108124)
RGD PMID:19736316, PMID:24108124 MGI:5566975 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Helb DNA helicase B ISO
IBA
(PMID:26774285)
PMID:21873635
(MGI:5766842|PMID:26774285)
RGD PMID:26774285, PMID:21873635 MGI:5766842, RGD:13792537 NCBI chr 7:64,860,641...64,888,146
Ensembl chr 7:64,860,666...64,887,448
JBrowse link
G Klhl15 kelch-like family member 15 ISO (PMID:27561354) RGD PMID:27561354 NCBI chr  X:63,342,277...63,390,915
Ensembl chr  X:63,343,546...63,389,989
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Parpbp PARP1 binding protein ISO
IBA
IEA
ISS
(PMID:22153967)
PMID:21873635
GO_REF:0000002
GO_REF:0000024
RGD
InterPro
UniProt
PMID:22153967, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr 7:28,654,707...28,724,412
Ensembl chr 7:28,654,707...28,715,224
JBrowse link
G Polq DNA polymerase theta ISO (PMID:25642963)
(MGI:5621198|PMID:25642960)
RGD PMID:25642960, PMID:25642963 MGI:5621198 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked ISO
ISS
(PMID:28735897)
GO_REF:0000024
RGD
UniProt
PMID:28735897 GO_REF:0000024 NCBI chr  X:110,670,037...110,782,420
Ensembl chr  X:110,670,119...110,782,284
JBrowse link
G Recql5 RecQ like helicase 5 ISO MGI:2448558 (MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:5648586 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (PMID:23333306)
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305)
RGD PMID:23306437, PMID:23333305, PMID:23333306 MGI:5468037, MGI:5476381 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
G Rmi2 RecQ mediated genome instability 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:4,904,458...4,910,339
Ensembl chr10:4,905,210...4,910,305
JBrowse link
G Shld1 shieldin complex subunit 1 ISO
IBA
(PMID:29656893)
PMID:21873635
RGD PMID:29656893, PMID:21873635 RGD:13792537 NCBI chr 3:125,318,682...125,396,705
Ensembl chr 3:125,320,680...125,396,821
JBrowse link
G Shld2 shieldin complex subunit 2 ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:10,570,307...10,661,528
Ensembl chr16:10,570,314...10,661,528
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO (PMID:23333306), (PMID:23345425)
(MGI:5476381|PMID:23333305), (MGI:5887194|PMID:20362325)
RGD PMID:20362325, PMID:23333305, PMID:23333306, PMID:23345425 MGI:5476381, MGI:5887194 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:30612738) RGD PMID:30612738 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035
JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein ISO
ISS
(PMID:29042561)
GO_REF:0000024
RGD
UniProt
PMID:29042561 GO_REF:0000024 NCBI chr 5:152,721,799...152,734,577
Ensembl chr 5:152,721,940...152,734,572
JBrowse link
G Cyren cell cycle regulator of NHEJ ISO
ISS
(PMID:28959974)
GO_REF:0000024
RGD
UniProt
PMID:28959974 GO_REF:0000024 NCBI chr 4:62,391,770...62,397,162
Ensembl chr 4:62,391,770...62,396,035
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:19549901)
GO_REF:0000024
RGD
UniProt
PMID:19549901 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 ISO (PMID:28241136) RGD PMID:28241136 NCBI chr10:10,829,866...10,831,782
Ensembl chr10:10,829,867...10,831,782
JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA glycosylase ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
negative regulation of endodeoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gzma granzyme A ISO (PMID:12524539) RGD PMID:12524539 NCBI chr 2:44,968,846...44,981,436
Ensembl chr 2:44,968,765...44,981,458
JBrowse link
negative regulation of endoribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abce1 ATP binding cassette subfamily E member 1 ISO (PMID:7539425) RGD PMID:7539425 NCBI chr19:31,867,960...31,892,863
Ensembl chr19:31,867,981...31,892,863
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 ISO
IEA
(PMID:19328063)
(MGI:3840374|PMID:19328063)
GO_REF:0000107
RGD
Ensembl
PMID:19328063 GO_REF:0000107, MGI:3840374 NCBI chr 7:141,039,433...141,070,269
Ensembl chr 7:141,034,982...141,069,989
JBrowse link
negative regulation of exonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 ISO
IBA
(PMID:15200954)
PMID:21873635
RGD PMID:15200954, PMID:21873635 RGD:13792537 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:15200954) RGD PMID:15200954 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nacc2 NACC family member 2 ISO
IBA
IEA
(PMID:22926524)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:22926524, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:3,508,084...3,574,787
Ensembl chr 3:3,510,041...3,574,787
JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3759354|PMID:17828264) RGD PMID:17828264 MGI:3759354 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:23840896) RGD PMID:23840896 NCBI chr19:55,438,409...55,510,652
Ensembl chr19:55,441,572...55,510,460
JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 IEA
ISO
GO_REF:0000107
(MGI:4440406|PMID:20176937)
Ensembl
RGD
PMID:20176937 GO_REF:0000107, MGI:4440406 NCBI chr20:29,509,283...29,511,382
Ensembl chr20:29,509,289...29,511,382
JBrowse link
G Fbp1 fructose-bisphosphatase 1 IEA
ISO
ISS
GO_REF:0000107
(PMID:19881551), (PMID:25043030)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19881551, PMID:25043030 GO_REF:0000024, GO_REF:0000107 NCBI chr17:396,175...417,480
Ensembl chr17:396,180...417,480
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:4365327|PMID:19109424) RGD PMID:19109424 MGI:4365327 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Ier3 immediate early response 3 ISO MGI:3773690 (MGI:4437986|PMID:19096392) RGD PMID:19096392 MGI:4437986 NCBI chr20:3,438,798...3,440,002
Ensembl chr20:3,438,798...3,440,769
JBrowse link
G Mtch2 mitochondrial carrier 2 ISO MGI:2449949|MGI:5566664 (MGI:5662300|PMID:26219591) RGD PMID:26219591 MGI:5662300 NCBI chr 3:79,678,141...79,695,356
Ensembl chr 3:79,678,201...79,694,006
JBrowse link
G Myog myogenin IDA RGD PMID:10225962 RGD:9686132 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO
IEA
(PMID:19955185)
GO_REF:0000107
RGD
Ensembl
PMID:19955185 GO_REF:0000107 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISS
ISO
GO_REF:0000024
(PMID:30451898)
UniProt
RGD
PMID:30451898 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:19955185) RGD PMID:19955185 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IMP RGD PMID:22343369 RGD:7242186 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706) RGD PMID:20141841, PMID:23217706 MGI:4881401, MGI:5619441 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (MGI:5441121|PMID:22891351) RGD PMID:22891351 MGI:5441121 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO
IBA
(MGI:4867601|PMID:20935145)
PMID:21873635
RGD PMID:20935145, PMID:21873635 MGI:4867601, RGD:13792537 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) IEA
ISO
GO_REF:0000107
(MGI:3820439|PMID:18698006)
Ensembl
RGD
PMID:18698006 GO_REF:0000107, MGI:3820439 NCBI chr10:90,296,144...90,312,401
Ensembl chr10:90,296,141...90,312,386
JBrowse link
negative regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpca hippocalcin IDA RGD PMID:15336960 RGD:9686438 NCBI chr 5:147,295,124...147,305,757
Ensembl chr 5:147,294,820...147,303,346
JBrowse link
G Pdzd3 PDZ domain containing 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:48,577,905...48,582,353
Ensembl chr 8:48,577,952...48,582,353
JBrowse link
G Rd3 retinal degeneration 3, GUCY2D regulator ISO (PMID:21928830), (PMID:30559291)
(MGI:5810226|PMID:27471269)
RGD PMID:21928830, PMID:27471269, PMID:30559291 MGI:5810226 NCBI chr13:110,739,645...110,749,167
Ensembl chr13:110,743,098...110,748,365
JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 ISO (MGI:6214451|PMID:26000965) RGD PMID:26000965 MGI:6214451 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
negative regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Da2-19 uncharacterized LOC302729 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:48,196,789...48,213,506
Ensembl chr  X:48,196,916...48,213,505
JBrowse link
G Thoc1 THO complex 1 ISO (MGI:5520039|PMID:22144908) RGD PMID:22144908 MGI:5520039 NCBI chr18:1,142,540...1,177,084
Ensembl chr18:1,142,782...1,176,974
JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor ISO MGI:103034|MGI:2158438 (MGI:1345885|PMID:10490661) RGD PMID:10490661 MGI:1345885 NCBI chr11:80,255,790...80,279,075
Ensembl chr11:80,255,790...80,279,075
JBrowse link
G Foxp3 forkhead box P3 ISO MGI:3696705 (MGI:3695768|PMID:16275384) RGD PMID:16275384 MGI:3695768 NCBI chr  X:15,753,175...15,768,648
Ensembl chr  X:15,753,175...15,768,522
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 ISO MGI:3695433 (MGI:3694584|PMID:17137798) RGD PMID:17137798 MGI:3694584 NCBI chr18:31,574,759...31,625,286
Ensembl chr18:31,574,821...31,625,274
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 ISS
ISO
GO_REF:0000024
(PMID:23200856)
UniProt
RGD
PMID:23200856 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
negative regulation of miRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ep300 E1A binding protein p300 IMP RGD PMID:22367739 RGD:7349314 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO MGI:1916394|MGI:3857306|MGI:5438913 (MGI:5301479|PMID:21880015), (MGI:5438202|PMID:22045337) RGD PMID:21880015, PMID:22045337 MGI:5301479, MGI:5438202 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein ISO
IBA
MGI:1919666 (MGI:5438202|PMID:22045337)
PMID:21873635
RGD PMID:22045337, PMID:21873635 MGI:5438202, RGD:13792537 NCBI chr 6:111,476,768...111,486,039
Ensembl chr 6:111,476,768...111,486,039
JBrowse link
negative regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 ISO UniProtKB:O88700 (MGI:5800654|PMID:27010503) RGD PMID:27010503 MGI:5800654 NCBI chr16:19,799,943...19,826,057
Ensembl chr16:19,800,463...19,803,796
JBrowse link
G Blm BLM RecQ like helicase ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359|UniProtKB:A8VU90 (MGI:1312959|PMID:9808625), (MGI:1928200|PMID:11101838), (MGI:3655554|PMID:16914751), (MGI:3700903|PMID:17210642), (MGI:5800654|PMID:27010503) RGD PMID:9808625, PMID:11101838, PMID:16914751, PMID:17210642, PMID:27010503 MGI:1312959, MGI:1928200, MGI:3655554, MGI:3700903, MGI:5800654 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Mlh1 mutL homolog 1 IEA
ISO
GO_REF:0000107
MGI:1858054 (MGI:3513725|PMID:15480418)
Ensembl
RGD
PMID:15480418 GO_REF:0000107, MGI:3513725 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:25225333)
Ensembl
RGD
PMID:25225333 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Pkp1 plakophilin 1 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997
JBrowse link
G Pkp3 plakophilin 3 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
negative regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag4 BAG cochaperone 4 IMP RGD PMID:14559896 RGD:2325853 NCBI chr16:71,057,709...71,075,874
Ensembl chr16:71,058,022...71,075,320
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C IDA RGD PMID:9792439 RGD:10041038 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IMP RGD PMID:11134005 RGD:10059415 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
negative regulation of mRNA polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 7:140,215,052...140,245,958
Ensembl chr 7:140,219,551...140,245,723
JBrowse link
G Cdk9 cyclin-dependent kinase 9 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165
JBrowse link
G Nelfe negative elongation factor complex member E ISO (PMID:19575011) RGD PMID:19575011 NCBI chr20:4,530,328...4,536,085
Ensembl chr20:4,530,342...4,536,209
JBrowse link
G Rnf20 ring finger protein 20 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 5:64,892,996...64,920,397
Ensembl chr 5:64,892,802...64,920,390
JBrowse link
G Rnf40 ring finger protein 40 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:199,037,472...199,052,823
Ensembl chr 1:199,037,544...199,052,172
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:85,437,780...85,466,854
Ensembl chr 1:85,437,780...85,466,854
JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 6:122,729,834...122,767,462
Ensembl chr 6:122,729,874...122,767,462
JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:33,288,369...33,333,256
Ensembl chr15:33,288,374...33,333,417
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr17:69,441,253...69,460,334
Ensembl chr17:69,441,223...69,460,321
JBrowse link
G C1qbp complement C1q binding protein ISO
IBA
ISS
(PMID:10022843)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:10022843, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO (MGI:5317240|PMID:21470964) RGD PMID:21470964 MGI:5317240 NCBI chr11:34,858,339...34,958,733
Ensembl chr11:34,865,532...34,956,536
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IEA
ISO
GO_REF:0000107
(MGI:3814796|PMID:18480465)
Ensembl
RGD
PMID:18480465 GO_REF:0000107, MGI:3814796 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Npm1 nucleophosmin 1 ISO (MGI:3615094|PMID:16376875) RGD PMID:16376875 MGI:3615094 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Pcbp4 poly(rC) binding protein 4 ISO
IBA
(MGI:5532638|PMID:23636947)
PMID:21873635
RGD PMID:23636947, PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 8:115,154,848...115,165,706
Ensembl chr 8:115,155,470...115,165,706
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO
IBA
IEA
ISS
(PMID:15009664)
PMID:21873635
(MGI:5532638|PMID:23636947), (MGI:6271441|PMID:17679093)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15009664, PMID:17679093, PMID:23636947, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:5532638, MGI:6271441, RGD:13792537 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 ISO
IBA
(MGI:5532638|PMID:23636947)
PMID:21873635
RGD PMID:23636947, PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 5:76,670,074...76,756,196
Ensembl chr 5:76,673,990...76,756,147
JBrowse link
G Rbm10 RNA binding motif protein 10 IEA
ISO
GO_REF:0000107
(MGI:5532638|PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107, MGI:5532638 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978
JBrowse link
G Rbm42 RNA binding motif protein 42 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:89,099,296...89,109,248
Ensembl chr 1:89,099,277...89,109,230
JBrowse link
G Rbmxl1 RBMX like 1 IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 ISO
ISS
(PMID:12665594)
GO_REF:0000024
RGD
UniProt
PMID:12665594 GO_REF:0000024 NCBI chr10:13,786,339...13,796,720
Ensembl chr10:13,786,459...13,796,717
JBrowse link
G Sap18 Sin3A associated protein 18 ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:38,069,320...38,073,625
Ensembl chr15:38,069,320...38,073,622
JBrowse link
G Sfswap splicing factor SWAP IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
JBrowse link
G Smptb polypyrimidine tract-binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:17,484,839...17,486,721
Ensembl chr  X:17,484,839...17,486,721
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (PMID:11684676)
(MGI:3688015|PMID:11684676)
RGD PMID:11684676 MGI:3688015 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:150,032,999...150,060,769
Ensembl chr 5:150,032,999...150,060,765
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:2,879,312...2,886,505
Ensembl chr 6:2,880,518...2,886,465
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 ISO
ISS
(PMID:15009664)
GO_REF:0000024
RGD
UniProt
PMID:15009664 GO_REF:0000024 NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022
JBrowse link
G Tra2b transformer 2 beta homolog ISO (MGI:5304203|PMID:22194695) RGD PMID:22194695 MGI:5304203 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:78,069,260...78,112,488
Ensembl chr 1:78,090,044...78,112,488
JBrowse link
G Nbas NBAS subunit of NRZ tethering complex ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:38,474,773...38,777,146
Ensembl chr 6:38,474,804...38,777,806
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO
ISS
(PMID:18447585)
GO_REF:0000024
RGD
UniProt
PMID:18447585 GO_REF:0000024 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Secisbp2 SECIS binding protein 2 IEA
ISO
GO_REF:0000107
MGI:4433050 (MGI:5582859|PMID:24274065)
Ensembl
RGD
PMID:24274065 GO_REF:0000107, MGI:5582859 NCBI chr17:13,555,348...13,586,595
Ensembl chr17:13,555,349...13,586,554
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Tob1 transducer of ErbB-2.1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18377426)
Ensembl
UniProt
RGD
PMID:18377426 GO_REF:0000024, GO_REF:0000107 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716
JBrowse link
negative regulation of nuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neil1 nei-like DNA glycosylase 1 ISO (PMID:17611195) RGD PMID:17611195 NCBI chr 8:61,817,258...61,824,023
Ensembl chr 8:61,817,258...61,823,102
JBrowse link
negative regulation of nucleic acid-templated transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002945.1 IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 1:89,967,031...90,000,386 JBrowse link
G AABR07043818.1 IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr19:41,539,959...41,541,986 JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 ISO (PMID:22927646) RGD PMID:22927646 NCBI chr16:53,998,604...54,030,006
Ensembl chr16:53,998,560...54,040,836
JBrowse link
G Bend6 BEN domain containing 6 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:38,297,253...38,351,312
Ensembl chr 9:38,297,322...38,351,024
JBrowse link
G Casp8ap2 caspase 8 associated protein 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:47,853,699...47,891,147
Ensembl chr 5:47,853,818...47,891,668
JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:32,373,443...32,416,044
Ensembl chr20:32,373,443...32,416,044
JBrowse link
G Cdyl chromodomain Y-like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:29,672,925...29,895,416
Ensembl chr17:29,674,164...29,895,386
JBrowse link
G Cdyl2 chromodomain Y-like 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:49,087,131...49,222,528
Ensembl chr19:49,093,355...49,198,073
JBrowse link
G Cops2 COP9 signalosome subunit 2 IDA PMID:12522100 UniProt PMID:12522100 RGD:10047265 NCBI chr 3:118,109,394...118,137,125
Ensembl chr 3:118,109,406...118,137,191
JBrowse link
G Ctbp1 C-terminal binding protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:82,762,109...82,789,350
Ensembl chr14:82,762,190...82,789,319
JBrowse link
G Cys1 cystin 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:43,844,937...43,862,131
Ensembl chr 6:43,844,937...43,862,131
JBrowse link
G Ddx54 DEAD-box helicase 54 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:41,469,642...41,484,887
Ensembl chr12:41,470,557...41,485,122
JBrowse link
G Hira histone cell cycle regulator IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:86,168,196...86,276,430
Ensembl chr11:86,168,196...86,276,430
JBrowse link
G Hsbp1 heat shock factor binding protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:51,985,196...51,989,528
Ensembl chr19:51,985,170...51,989,544
JBrowse link
G Hsbp1l1 heat shock factor binding protein 1-like 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:76,748,067...76,754,642
Ensembl chr18:76,748,067...76,753,902
JBrowse link
G LOC100911837 protein HIRA-like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:85,802,536...85,896,680
Ensembl chr11:85,802,605...85,895,613
JBrowse link
G Mta1 metastasis associated 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Nif3l1 NGG1 interacting factor 3 like 1 ISS
ISO
GO_REF:0000024
(MGI:5619492|PMID:12522100)
UniProt
RGD
PMID:12522100 GO_REF:0000024, MGI:5619492 NCBI chr 9:65,329,143...65,349,280
Ensembl chr 9:65,331,290...65,349,141
JBrowse link
G Npat nuclear protein, co-activator of histone transcription IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:58,120,179...58,158,052
Ensembl chr 8:58,120,179...58,158,052
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662
JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:68,105,442...68,137,509
Ensembl chr11:68,105,369...68,137,535
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G Riox2 ribosomal oxygenase 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:43,006,190...43,028,722
Ensembl chr11:43,006,757...43,022,565
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Scai suppressor of cancer cell invasion IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:23,357,586...23,474,218
Ensembl chr 3:23,362,707...23,474,170
JBrowse link
G Tcp10b t-complex protein 10b IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:53,530,992...53,554,113
Ensembl chr 1:53,531,076...53,554,113
JBrowse link
G Tle3 TLE family member 3, transcriptional corepressor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:66,296,509...66,342,186
Ensembl chr 8:66,296,883...66,342,176
JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:10,964,136...10,988,127
Ensembl chr 7:10,962,330...10,988,137
JBrowse link
G Tob1 transducer of ErbB-2.1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716
JBrowse link
G Tob2 transducer of ERBB2, 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:123,079,520...123,088,240
Ensembl chr 7:123,079,537...123,088,279
JBrowse link
G Zfp653 zinc finger protein 653 ISO (PMID:12920234) RGD PMID:12920234 NCBI chr 8:23,066,576...23,085,502
Ensembl chr 8:23,066,576...23,084,879
JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:63,825,616...63,914,740
Ensembl chr17:63,825,627...63,879,171
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:162,480,766...162,594,145
Ensembl chr 3:162,480,804...162,581,610
JBrowse link
negative regulation of nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase ISO (PMID:9596658) RGD PMID:9596658 NCBI chr 5:156,703,579...156,734,541
Ensembl chr 5:156,703,579...156,734,541
JBrowse link
negative regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcdin3d BCDIN3 domain containing RNA methyltransferase ISO
IBA
ISS
(PMID:23063121)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23063121, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:141,132,106...141,136,700
Ensembl chr 7:141,132,133...141,136,700
JBrowse link
G Lin28b lin-28 homolog B ISO (PMID:18951094) RGD PMID:18951094 NCBI chr20:50,482,536...50,580,273
Ensembl chr20:50,486,809...50,564,987
JBrowse link
negative regulation of pri-miRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (PMID:24827165), (PMID:25152461) RGD PMID:24827165, PMID:25152461 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:28124060)
Ensembl
RGD
PMID:28124060 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gata6 GATA binding protein 6 IMP PMID:25950484 BHF-UCL PMID:25950484 RGD:11541106 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:Q6NZM9 (MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:5754467 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac4 histone deacetylase 4 ISO UniProtKB:P70288 (MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:5754467 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 ISO (PMID:22387553) RGD PMID:22387553 NCBI chr 1:73,393,854...73,399,448
Ensembl chr 1:73,393,850...73,399,579
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO UniProtKB:Q14934 (PMID:23543060) RGD PMID:23543060 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO UniProtKB:Q12968 (PMID:23543060) RGD PMID:23543060 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Nfib nuclear factor I/B ISO (PMID:18384814) RGD PMID:18384814 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEA
ISO
GO_REF:0000107
(PMID:26493107)
Ensembl
RGD
PMID:26493107 GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19409607) RGD PMID:19409607 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:21636785) RGD PMID:21636785 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta ISO (MGI:5705218|PMID:20445066) RGD PMID:20445066 MGI:5705218 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:23878390) RGD PMID:23878390 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:26687115) RGD PMID:26687115 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srf serum response factor ISO (MGI:5688838|PMID:21303526) RGD PMID:21303526 MGI:5688838 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IMP PMID:21704009 BHF-UCL PMID:21704009 RGD:12792988 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:5754467 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
negative regulation of primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 ISO UniProtKB:P40763 (PMID:31507089) RGD PMID:31507089 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Lin28b lin-28 homolog B ISO (PMID:18951094) RGD PMID:18951094 NCBI chr20:50,482,536...50,580,273
Ensembl chr20:50,486,809...50,564,987
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:24636259 RGD:12789709 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:31507089) RGD PMID:31507089 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
negative regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 ISO
IEA
(PMID:20388878)
GO_REF:0000107
RGD
Ensembl
PMID:20388878 GO_REF:0000107 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO
IEA
(PMID:20388878)
GO_REF:0000107
RGD
Ensembl
PMID:20388878 GO_REF:0000107 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO (PMID:20388878) RGD PMID:20388878 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO (MGI:5562625|PMID:24161931) RGD PMID:24161931 MGI:5562625 NCBI chr 2:241,909,332...242,186,861
Ensembl chr 2:241,909,832...242,184,854
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO RNAcentral:URS000024463E_9606 (PMID:22269326) RGD PMID:22269326 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:31124343), (PMID:31824476) RGD PMID:31124343, PMID:31824476 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tp53 tumor protein p53 ISO MGI:1890508 (MGI:5013521|PMID:21522133) RGD PMID:21522133 MGI:5013521 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Zc3h10 zinc finger CCCH type containing 10 ISO (PMID:28431233) RGD PMID:28431233 NCBI chr 7:2,968,428...2,972,521
Ensembl chr 7:2,968,435...2,972,521
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO
ISS
(PMID:22055188)
GO_REF:0000024
RGD
UniProt
PMID:22055188 GO_REF:0000024 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:2180033|MGI:98834 (MGI:5013521|PMID:21522133) RGD PMID:21522133 MGI:5013521 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
negative regulation of production of siRNA involved in RNA interference term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tert telomerase reverse transcriptase ISO (PMID:19701182) RGD PMID:19701182 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 ISO (PMID:20129925) RGD PMID:20129925 NCBI chr17:16,240,458...16,274,626
Ensembl chr17:16,204,427...16,274,624
JBrowse link
G Phf8 PHD finger protein 8 ISO (PMID:20208542) RGD PMID:20208542 NCBI chr  X:21,063,487...21,168,750
Ensembl chr  X:21,063,562...21,168,750
JBrowse link
negative regulation of RNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Rgn regucalcin IMP RGD PMID:12397604 RGD:1566573 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
negative regulation of RNA polymerase II transcription preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 ISO (PMID:8006019) RGD PMID:8006019 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Thra thyroid hormone receptor alpha IEA
ISO
GO_REF:0000107
(PMID:8524305)
Ensembl
RGD
PMID:8524305 GO_REF:0000107 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
negative regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 IMP RGD PMID:19116344 RGD:2313309 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
G LOC100361854 ribosomal protein S26-like ISO (PMID:15716004) RGD PMID:15716004 NCBI chr  X:115,495,660...115,496,062
Ensembl chr  X:115,495,698...115,496,045
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO (PMID:18335065) RGD PMID:18335065 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 IMP
IBA
ISO
PMID:21873635
(PMID:18335065)
RGD PMID:18335065, PMID:18534753, PMID:21873635 RGD:10045970, RGD:13792537 NCBI chr 2:223,261,444...223,323,075
Ensembl chr 2:223,262,852...223,322,585
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 IEA
ISO
GO_REF:0000107
(PMID:18335065)
Ensembl
RGD
PMID:18335065 GO_REF:0000107 NCBI chr 5:76,670,074...76,756,196
Ensembl chr 5:76,673,990...76,756,147
JBrowse link
G Rps13 ribosomal protein S13 ISO (PMID:17881366) RGD PMID:17881366 NCBI chr 1:185,328,902...185,331,332
Ensembl chr 3:4,341,249...4,341,771
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 IEA
ISO
GO_REF:0000107
(MGI:3840374|PMID:19328063)
(PMID:19328063)
Ensembl
RGD
PMID:19328063 GO_REF:0000107, MGI:3840374 NCBI chr 7:141,039,433...141,070,269
Ensembl chr 7:141,034,982...141,069,989
JBrowse link
negative regulation of RNA-directed 5'-3' RNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a2 eukaryotic translation initiation factor 4A2 ISO (PMID:11922617) RGD PMID:11922617 NCBI chr11:81,373,047...81,379,680
Ensembl chr11:81,373,048...81,379,871
JBrowse link
negative regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2b lysine acetyltransferase 2B ISO (PMID:26867678) RGD PMID:26867678 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor ISO (PMID:20663920) RGD PMID:20663920 NCBI chr 4:133,037,515...133,127,183
NCBI chr 4:133,131,711...133,133,170
Ensembl chr 4:133,037,014...133,131,953
JBrowse link
negative regulation of snRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cc2d1a coiled-coil and C2 domain containing 1A ISO (PMID:12917378) RGD PMID:12917378 NCBI chr19:25,246,912...25,261,965
Ensembl chr19:25,246,913...25,261,946
JBrowse link
negative regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 ISO
IBA
(PMID:25620558)
PMID:21873635
(MGI:5522574|PMID:24115439), (MGI:5645200|PMID:22579284)
RGD PMID:22579284, PMID:24115439, PMID:25620558, PMID:21873635 MGI:5522574, MGI:5645200, RGD:13792537 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:15507207) RGD PMID:15507207 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO (PMID:19581589) RGD PMID:19581589 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
negative regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 ISO (PMID:17548428) RGD PMID:17548428 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit NOT ISO (PMID:18812185) RGD PMID:18812185 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Mcrs1 microspherule protein 1 ISO (PMID:15044100) RGD PMID:15044100 NCBI chr 7:140,910,420...140,919,234
Ensembl chr 7:140,910,423...140,919,234
JBrowse link
G Men1 menin 1 ISO (PMID:12837246) RGD PMID:12837246 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:16522649) RGD PMID:16522649 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
(PMID:15632080)
PMID:21873635
RGD PMID:15632080, PMID:21873635 RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:16556873 RGD:1580657 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Ten1 TEN1 subunit of CST complex IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:10597287) RGD PMID:10597287 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of telomerase RNA reverse transcriptase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 ISO (PMID:24528514) RGD PMID:24528514 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
negative regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:17694070) RGD PMID:17694070 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Nbn nibrin ISO
IEA
(PMID:17694070)
GO_REF:0000107
RGD
Ensembl
PMID:17694070 GO_REF:0000107 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO (PMID:17694070) RGD PMID:17694070 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor ISO (PMID:12676087) RGD PMID:12676087 NCBI chr10:61,526,024...61,542,583
NCBI chr10:61,771,912...62,007,030
Ensembl chr10:61,772,449...62,007,030
Ensembl chr10:61,772,449...62,007,030
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:24270157) RGD PMID:24270157 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
negative regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (PMID:17055345) RGD PMID:17055345 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:17055345) RGD PMID:17055345 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:17055345) RGD PMID:17055345 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Terf2ip TERF2 interacting protein IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:44,231,317...44,238,406
Ensembl chr19:44,231,251...44,238,404
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO (MGI:2656398|PMID:12676566) RGD PMID:12676566 MGI:2656398 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 ISO (MGI:5645200|PMID:22579284) RGD PMID:22579284 MGI:5645200 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 ISO
IBA
(PMID:15507207)
PMID:21873635
(MGI:5883205|PMID:24120135)
RGD PMID:15507207, PMID:24120135, PMID:21873635 MGI:5883205, RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
UniProtKB:Q9NUX5 (PMID:15181449), (PMID:15380063)
PMID:21873635
RGD PMID:15181449, PMID:15380063, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Ctc1 CST telomere replication complex component 1 ISO (PMID:22763445) RGD PMID:22763445 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Dcp2 decapping mRNA 2 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Exosc10 exosome component 10 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
JBrowse link
G Gnl3l G protein nucleolar 3 like ISO (PMID:18082603) RGD PMID:18082603 NCBI chr  X:20,037,558...20,070,505
Ensembl chr  X:20,034,882...20,070,578
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:23935072)
GO_REF:0000107
RGD
Ensembl
PMID:23935072 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:18082603) RGD PMID:18082603 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO
IBA
IEA
(PMID:18082603)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18082603, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Nat10 N-acetyltransferase 10 ISO (PMID:18082603) RGD PMID:18082603 NCBI chr 3:93,658,119...93,698,136
Ensembl chr 3:93,658,117...93,698,136
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:23657261) RGD PMID:23657261 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO UniProtKB:Q96AP0 (PMID:15181449) RGD PMID:15181449 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stn1 STN1 subunit of CST complex IEA
ISO
GO_REF:0000107
(PMID:22763445)
Ensembl
RGD
PMID:22763445 GO_REF:0000107 NCBI chr 1:267,281,786...267,315,714
Ensembl chr 1:267,281,764...267,315,729
JBrowse link
G Ten1 TEN1 subunit of CST complex ISO
IBA
(PMID:22763445)
PMID:21873635
RGD PMID:22763445, PMID:21873635 RGD:13792537 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:26950371) RGD PMID:26950371 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:11971978), (PMID:17055345) RGD PMID:11971978, PMID:17055345 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO (PMID:10581025), (PMID:15133513) RGD PMID:10581025, PMID:15133513 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:18812185) RGD PMID:18812185 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Mcrs1 microspherule protein 1 ISO (PMID:15044100) RGD PMID:15044100 NCBI chr 7:140,910,420...140,919,234
Ensembl chr 7:140,910,423...140,919,234
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (MGI:5705431|PMID:26586427) RGD PMID:26586427 MGI:5705431 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit ISO (PMID:24012755) RGD PMID:24012755 NCBI chr 1:198,114,514...198,120,061
Ensembl chr 1:198,112,245...198,120,061
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit ISO (PMID:24012755) RGD PMID:24012755 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:24012755) RGD PMID:24012755 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tnks tankyrase ISO (PMID:25939383) RGD PMID:25939383 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Tnks2 tankyrase 2 ISO (PMID:25939383) RGD PMID:25939383
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 ISO
IBA
(PMID:15200954)
PMID:21873635
RGD PMID:15200954, PMID:21873635 RGD:13792537 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO
IBA
(PMID:15200954)
PMID:21873635
RGD PMID:15200954, PMID:21873635 RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
negative regulation of telomeric RNA transcription from RNA pol II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler IEA
ISO
ISS
GO_REF:0000107
(MGI:4881400|PMID:20211137)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20211137 GO_REF:0000024, GO_REF:0000107, MGI:4881400 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scaf4 SR-related CTD-associated factor 4 ISS
ISO
GO_REF:0000024
(PMID:31104839)
UniProt
RGD
PMID:31104839 GO_REF:0000024 NCBI chr11:30,371,713...30,428,073
Ensembl chr11:30,371,713...30,428,073
JBrowse link
G Scaf8 SR-related CTD-associated factor 8 ISS
ISO
GO_REF:0000024
(PMID:31104839)
UniProt
RGD
PMID:31104839 GO_REF:0000024 NCBI chr 1:44,017,801...44,120,619
Ensembl chr 1:44,019,059...44,120,615
JBrowse link
negative regulation of transcription by competitive promoter binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe41 basic helix-loop-helix family, member e41 IEA
ISO
GO_REF:0000107
(MGI:5297791|PMID:12657651)
Ensembl
RGD
PMID:12657651 GO_REF:0000107, MGI:5297791 NCBI chr 4:180,230,742...180,235,138
Ensembl chr 4:180,232,382...180,234,804
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO (PMID:19861239) RGD PMID:19861239 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Dach1 dachshund family transcription factor 1 ISO (PMID:20956529) RGD PMID:20956529 NCBI chr15:82,095,003...82,482,272
Ensembl chr15:82,099,159...82,482,009
JBrowse link
G Kdm2a lysine demethylase 2A ISO (PMID:26037310) RGD PMID:26037310 NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:19443654) RGD PMID:19443654 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Muc1 mucin 1, cell surface associated ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:188,543,137...188,547,874
Ensembl chr 2:188,543,137...188,547,874
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO (PMID:19700410) RGD PMID:19700410 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
G Phb prohibitin ISO (PMID:18487222) RGD PMID:18487222 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Smad7 SMAD family member 7 ISO
IEA
(PMID:17438144)
GO_REF:0000107
RGD
Ensembl
PMID:17438144 GO_REF:0000107 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:11278550), (PMID:8321221)
UniProt
Ensembl
RGD
PMID:8321221, PMID:11278550 GO_REF:0000024, GO_REF:0000107 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
negative regulation of transcription by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A ISO (MGI:2389510|PMID:12368916) RGD PMID:12368916 MGI:2389510 NCBI chr 7:2,518,267...2,548,840
Ensembl chr 7:2,529,077...2,547,062
JBrowse link
G Flna filamin A ISO (PMID:22307607) RGD PMID:22307607 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Maf1 MAF1 homolog, negative regulator of RNA polymerase III ISO (PMID:17499043) RGD PMID:17499043 NCBI chr 7:117,417,643...117,420,722
Ensembl chr 7:117,417,687...117,420,719
JBrowse link
negative regulation of transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029605.1 ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr10:39,850,818...39,870,188 JBrowse link
G AABR07035818.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:23,463,157...23,469,319 JBrowse link
G AABR07049821.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:139,857,363...139,864,393 JBrowse link
G AABR07055919.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:15,850,985...15,852,930 JBrowse link
G AABR07067882.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 9:70,787,136...70,787,913 JBrowse link
G AABR07069371.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:18,401,035...18,408,179 JBrowse link
G AC109942.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:15,279,611...15,283,112 JBrowse link
G Acvr2b activin A receptor type 2B ISO
IEA
UniProtKB:Q6ZVN8 (PMID:18326817)
GO_REF:0000107
RGD
Ensembl
PMID:18326817 GO_REF:0000107 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Aebp1 AE binding protein 1 ISO
IEA
(PMID:15654748)
GO_REF:0000107
RGD
Ensembl
PMID:15654748 GO_REF:0000107 NCBI chr14:86,101,253...86,111,323
Ensembl chr14:86,101,277...86,111,306
JBrowse link
G Aebp2 AE binding protein 2 ISO (MGI:1336985|PMID:10329662) RGD PMID:10329662 MGI:1336985 NCBI chr 4:174,799,378...174,863,260
Ensembl chr 4:174,810,959...174,863,260
JBrowse link
G Ahr aryl hydrocarbon receptor ISO
IBA
(MGI:3774739|PMID:18223155)
PMID:21873635
RGD PMID:18223155, PMID:21873635 MGI:3774739, RGD:13792537 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor ISO
IBA
(MGI:4359338|PMID:19251700)
PMID:21873635
RGD PMID:19251700, PMID:21873635 MGI:4359338, RGD:13792537 NCBI chr 1:31,603,297...31,698,329
Ensembl chr 1:31,603,297...31,698,329
JBrowse link
G Ajuba ajuba LIM protein ISO (MGI:3795068|PMID:18347060) RGD PMID:18347060 MGI:3795068 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Akirin2 akirin 2 IDA RGD PMID:18460465 RGD:2306009 NCBI chr 5:50,001,945...50,016,544
Ensembl chr 5:50,002,184...50,016,539
JBrowse link
G Alx1 ALX homeobox 1 ISO (PMID:8756334) RGD PMID:8756334 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Ankrd1 ankyrin repeat domain 1 IDA RGD PMID:9043061 RGD:5133283 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Ankrd2 ankyrin repeat domain 2 ISO UniProtKB:P19838 (PMID:24434510) RGD PMID:24434510 NCBI chr 1:261,281,859...261,291,307
Ensembl chr 1:261,281,543...261,291,394
JBrowse link
G Ankrd33 ankyrin repeat domain 33 ISO
IBA
(MGI:4431327|PMID:20026326)
PMID:21873635
RGD PMID:20026326, PMID:21873635 MGI:4431327, RGD:13792537 NCBI chr 7:142,755,896...142,759,666
Ensembl chr 7:142,756,312...142,759,629
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO UniProtKB:P05067:PRO_0000000099 (PMID:21803450) RGD PMID:21803450 NCBI chr 1:170,387,625...170,411,263
Ensembl chr 1:170,387,609...170,404,056
JBrowse link
G App amyloid beta precursor protein ISO UniProtKB:O00213 (PMID:21803450) RGD PMID:21803450 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Ar androgen receptor IEA
ISO
GO_REF:0000107
(PMID:12902338)
Ensembl
RGD
PMID:12902338 GO_REF:0000107 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO (MGI:5466629|PMID:23129809) RGD PMID:23129809 MGI:5466629 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Arid5a AT-rich interaction domain 5A ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:42,871,907...42,886,725
Ensembl chr 9:42,871,950...42,884,855
JBrowse link
G Arid5b AT-rich interaction domain 5B ISO (PMID:8649988) RGD PMID:8649988 NCBI chr20:21,713,900...21,881,193
Ensembl chr20:21,564,975...21,880,715
JBrowse link
G Arx aristaless related homeobox IEA
ISO
GO_REF:0000107
(MGI:3579957|PMID:15930104)
Ensembl
RGD
PMID:15930104 GO_REF:0000107, MGI:3579957 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (PMID:11736660) RGD PMID:11736660 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Ascl3 achaete-scute family bHLH transcription factor 3 ISO (MGI:2156263|PMID:11784080) RGD PMID:11784080 MGI:2156263 NCBI chr 1:174,351,413...174,355,590 JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO MGI:3840841 (MGI:5444773|PMID:23046516) RGD PMID:23046516 MGI:5444773 NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
JBrowse link
G Atf2 activating transcription factor 2 IMP RGD PMID:20181929 RGD:10047415 NCBI chr 3:60,721,137...60,795,951
Ensembl chr 3:60,721,135...60,795,951
JBrowse link
G Atf3 activating transcription factor 3 ISO (PMID:8622660)
(MGI:3624470|PMID:16644691)
RGD PMID:8622660, PMID:16644691 MGI:3624470 NCBI chr13:109,817,892...109,849,632
Ensembl chr13:109,817,728...109,849,632
JBrowse link
G Atf4 activating transcription factor 4 ISS
ISO
GO_REF:0000024
(MGI:2671714|PMID:12925279)
UniProt
RGD
PMID:12925279 GO_REF:0000024, MGI:2671714 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Atf7 activating transcription factor 7 ISO (PMID:8288576) RGD PMID:8288576 NCBI chr 7:144,131,382...144,223,463
Ensembl chr 7:144,136,325...144,223,429
JBrowse link
G Atf7ip activating transcription factor 7 interacting protein ISO (MGI:1355392|PMID:10777215) RGD PMID:10777215 MGI:1355392 NCBI chr 4:170,476,998...170,563,063
Ensembl chr 4:170,518,673...170,559,532
JBrowse link
G Atn1 atrophin 1 ISO (PMID:10973986)
(MGI:3624573|PMID:16702404)
RGD PMID:10973986, PMID:16702404 MGI:3624573 NCBI chr 4:157,267,394...157,281,199
Ensembl chr 4:157,267,901...157,274,755
Ensembl chr 9:157,267,901...157,274,755
JBrowse link
G Atxn1 ataxin 1 ISO
IBA
MGI:1918972 (MGI:5298126|PMID:22014525)
PMID:21873635
RGD PMID:22014525, PMID:21873635 MGI:5298126, RGD:13792537 NCBI chr17:19,160,986...19,533,814
Ensembl chr17:19,249,952...19,533,814
JBrowse link
G Atxn1l ataxin 1-like ISO MGI:1918972 (MGI:4818500|PMID:20628574), (MGI:5298126|PMID:22014525) RGD PMID:20628574, PMID:22014525 MGI:4818500, MGI:5298126 NCBI chr19:41,932,356...41,939,456 JBrowse link
G Aurkb aurora kinase B ISO
ISS
(PMID:20959462)
GO_REF:0000024
RGD
UniProt
PMID:20959462 GO_REF:0000024 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Bach1 BTB domain and CNC homolog 1 ISO (PMID:21555518), (PMID:24035498)
(MGI:894637|PMID:8887638)
RGD PMID:8887638, PMID:21555518, PMID:24035498 MGI:894637 NCBI chr11:27,364,913...27,398,713
Ensembl chr11:27,364,916...27,398,842
JBrowse link
G Bach2 BTB domain and CNC homolog 2 ISO (MGI:894637|PMID:8887638) RGD PMID:8887638 MGI:894637 NCBI chr 5:47,458,891...47,807,176
Ensembl chr 5:47,546,014...47,807,166
JBrowse link
G Barx2 BARX homeobox 2 ISO (MGI:3573816|PMID:15728386) RGD PMID:15728386 MGI:3573816 NCBI chr 8:32,950,878...33,018,245
Ensembl chr 8:32,950,875...33,017,854
JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 ISO
IEA
(PMID:15467742)
GO_REF:0000107
RGD
Ensembl
PMID:15467742 GO_REF:0000107 NCBI chr13:109,713,376...109,726,438
Ensembl chr13:109,713,489...109,724,863
JBrowse link
G Bbx BBX high mobility group box domain containing IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:52,983,286...53,228,557
Ensembl chr11:53,081,025...53,228,716
JBrowse link
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO
IBA
(PMID:19153051), (PMID:29606353)
PMID:21873635
(MGI:6153398|PMID:29606353)
RGD PMID:19153051, PMID:29606353, PMID:21873635 MGI:6153398, RGD:13792537 NCBI chr14:108,826,717...108,921,197
Ensembl chr14:108,826,831...108,921,669
JBrowse link
G Bcl6 BCL6, transcription repressor ISO
IBA
(PMID:11929873), (PMID:15577913)
PMID:21873635
MGI:103034|MGI:96556 (MGI:1267159|PMID:9632807), (MGI:1345885|PMID:10490661), (MGI:2182510|PMID:12097386), (MGI:2664587|PMID:12817026), (MGI:3051167|PMID:15240705), (MGI:3527407|PMID:15611242), (MGI:3531029|PMID:15507530), (MGI:3578694|PMID:15659391), (MGI:3695553|PMID:17125145), (MGI:5493185|PMID:23160044), (MGI:87164|PMID:9110977)
RGD PMID:9110977, PMID:9632807, PMID:10490661, PMID:11929873, PMID:12097386, PMID:12817026, PMID:15240705, PMID:15507530, PMID:15577913, PMID:15611242, PMID:15659391, PMID:17125145, PMID:23160044, PMID:21873635 MGI:1267159, MGI:1345885, MGI:2182510, MGI:2664587, MGI:3051167, MGI:3527407, MGI:3531029, MGI:3578694, MGI:3695553, MGI:5493185, MGI:87164, RGD:13792537 NCBI chr11:80,255,790...80,279,075
Ensembl chr11:80,255,790...80,279,075
JBrowse link
G Bcl6b BCL6B, transcription repressor ISO
IBA
(MGI:1267159|PMID:9632807)
PMID:21873635
RGD PMID:9632807, PMID:21873635 MGI:1267159, RGD:13792537 NCBI chr10:56,834,363...56,840,058
Ensembl chr10:56,834,364...56,839,437
JBrowse link
G Bcor BCL6 co-repressor ISO (PMID:19578371)
MGI:96395 (MGI:2682643|PMID:12776190), (MGI:5618398|PMID:25331958)
RGD PMID:12776190, PMID:19578371, PMID:25331958 MGI:2682643, MGI:5618398 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
G Bend3 BEN domain containing 3 ISO
IBA
(PMID:21914818)
PMID:21873635
RGD PMID:21914818, PMID:21873635 RGD:13792537 NCBI chr20:48,248,193...48,270,905
Ensembl chr20:48,248,455...48,268,147
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IMP
ISO
IEA
(PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144)
GO_REF:0000107
RGD
Ensembl
PMID:12397359, PMID:12624110, PMID:14672706, PMID:15193144, PMID:12954728 GO_REF:0000107, RGD:1358397 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 ISO
IEA
(PMID:14672706), (PMID:15193144)
(MGI:2388855|PMID:12397359)
GO_REF:0000107
RGD
Ensembl
PMID:12397359, PMID:14672706, PMID:15193144 GO_REF:0000107, MGI:2388855 NCBI chr 4:180,230,742...180,235,138
Ensembl chr 4:180,232,382...180,234,804
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO
IBA
(PMID:19636380)
PMID:21873635
MGI:95286|MGI:99161 (MGI:1098085|PMID:9312051), (MGI:1100253|PMID:9367786), (MGI:1932296|PMID:11290297), (MGI:3703096|PMID:17107999), (MGI:5522578|PMID:24105743)
RGD PMID:9312051, PMID:9367786, PMID:11290297, PMID:17107999, PMID:19636380, PMID:24105743, PMID:21873635 MGI:1098085, MGI:1100253, MGI:1932296, MGI:3703096, MGI:5522578, RGD:13792537 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:1205964|PMID:9585504), (MGI:3611958|PMID:16314491)
(PMID:19736317), (PMID:9187146)
UniProt
RGD
PMID:9187146, PMID:9585504, PMID:16314491, PMID:19736317, PMID:21873635 GO_REF:0000024, MGI:1205964, MGI:3611958, RGD:13792537 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IBA
(PMID:9187146)
PMID:21873635
(MGI:1205964|PMID:9585504), (MGI:3039210|PMID:15070745)
RGD PMID:9187146, PMID:9585504, PMID:15070745, PMID:21873635 MGI:1205964, MGI:3039210, RGD:13792537 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:4352622 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmyc brain expressed myelocytomatosis oncogene IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,916,662...2,917,421
Ensembl chr 3:2,916,662...2,917,421
JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO (PMID:10727212) RGD PMID:10727212 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Brms1 BRMS1, transcriptional repressor and anoikis regulator IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,325,352...220,334,616 JBrowse link
G Brms1l BRMS1 like transcriptional repressor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:76,675,399...76,708,261
NCBI chr 6:76,743,243...76,753,950
Ensembl chr 6:76,675,418...76,708,261
Ensembl chr 6:76,675,418...76,708,261
JBrowse link
G Btg2 BTG anti-proliferation factor 2 IDA PMID:20020054 MGI PMID:20020054 RGD:8554653 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G C1qbp complement C1q binding protein ISO
ISS
(PMID:15243141)
GO_REF:0000024
RGD
UniProt
PMID:15243141 GO_REF:0000024 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
JBrowse link
G Calr calreticulin ISO (PMID:8107809) RGD PMID:8107809 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link