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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleobase-containing compound metabolic process
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Accession:GO:0045935 term browser browse the term
Definition:Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
Synonyms:exact_synonym: positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism;   up regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   upregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
 narrow_synonym: activation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   stimulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
 related_synonym: positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process


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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (PMID:26489465) UniProt PMID:26489465 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 ISO (PMID:28297718) CACAO PMID:28297718 NCBI chrNW_004955418:30,795...33,394
Ensembl chrNW_004955418:30,893...32,936
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Khsrp KH-type splicing regulatory protein ISO (PMID:16126846)
(PMID:28275056)
UniProtKB
CACAO
PMID:16126846, PMID:28275056 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 ISO (MGI:MGI:6105829|PMID:27616329)
(PMID:29180010)
UniProt PMID:27616329, PMID:29180010 MGI:MGI:6105829 NCBI chrNW_004955486:9,736,801...9,744,659
Ensembl chrNW_004955486:9,737,365...9,744,111
JBrowse link
G Qki QKI, KH domain containing RNA binding ISO (MGI:MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:MGI:5316962 NCBI chrNW_004955439:17,925,205...18,079,727 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24375645) UniProtKB PMID:24375645 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 ISO (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671) UniProtKB PMID:26000482, PMID:26255671 MGI:MGI:5706859, MGI:MGI:5751631 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:28335005) CACAO PMID:28335005 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Trim71 tripartite motif containing 71 ISO (PMID:23125361) CACAO PMID:23125361 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase ISO (PMID:26255671)
(PMID:24726324)
UniProtKB
UniProt
PMID:24726324, PMID:26255671 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (MGI:MGI:3842851|PMID:19322177), (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5706909|PMID:23185455), (MGI:MGI:5707103|PMID:26134560), (MGI:MGI:5751631|PMID:26255671)
(PMID:19909337)
UniProtKB PMID:19322177, PMID:19909337, PMID:23185455, PMID:26000482, PMID:26134560, PMID:26255671 MGI:MGI:3842851, MGI:MGI:5706859, MGI:MGI:5706909, MGI:MGI:5707103, MGI:MGI:5751631 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D ISO (MGI:MGI:5707103|PMID:26134560) UniProtKB PMID:26134560 MGI:MGI:5707103 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230
JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (MGI:MGI:5784976|PMID:22701344), (MGI:MGI:5788345|PMID:27193233)
(MGI:MGI:5795824|PMID:17288565)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
UniProtKB PMID:9703499, PMID:11719186, PMID:14679154, PMID:15187101, PMID:15634918, PMID:15687258, PMID:15766526, PMID:17288565, PMID:20221403, PMID:22701344, PMID:27193233 MGI:MGI:5784976, MGI:MGI:5788345, MGI:MGI:5795824 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 ISO (PMID:12198173), (PMID:25014217), (PMID:25106868)
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
(MGI:MGI:4818820|PMID:20622884), (MGI:MGI:5784967|PMID:24733888), (MGI:MGI:5784976|PMID:22701344)
(MGI:MGI:5779430|PMID:27102483), (MGI:MGI:5784968|PMID:24700863)
UniProtKB PMID:12198173, PMID:15467755, PMID:15538381, PMID:15687258, PMID:18326031, PMID:19179481, PMID:20622884, PMID:22701344, PMID:24700863, PMID:24733888, PMID:25014217, PMID:25106868, PMID:26542173, PMID:27102483 MGI:MGI:4818820, MGI:MGI:5779430, MGI:MGI:5784967, MGI:MGI:5784968, MGI:MGI:5784976 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 ISO (MGI:MGI:4818820|PMID:20622884), (MGI:MGI:5784976|PMID:22701344)
(PMID:25106868)
UniProtKB PMID:20622884, PMID:22701344, PMID:25106868 MGI:MGI:4818820, MGI:MGI:5784976 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
chromatin-mediated maintenance of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 ISO (MGI:MGI:5294291|PMID:18243098) UniProtKB PMID:18243098 MGI:MGI:5294291 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:MGI:5428344 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Pabpc1l poly(A) binding protein cytoplasmic 1 like ISO (MGI:MGI:5688228|PMID:26134869) MGI PMID:26134869 MGI:MGI:5688228 NCBI chrNW_004955445:12,425,738...12,450,830
Ensembl chrNW_004955445:12,422,204...12,450,024
JBrowse link
G Padi2 peptidyl arginine deiminase 2 ISO (PMID:22853951) UniProtKB PMID:22853951 NCBI chrNW_004955527:1,709,307...1,751,332
Ensembl chrNW_004955527:1,709,444...1,752,783
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 ISO (PMID:12917342) UniProtKB PMID:12917342 NCBI chrNW_004955547:659,919...673,637
Ensembl chrNW_004955547:659,984...674,705
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647
JBrowse link
G Cnot6l CCR4-NOT transcription complex subunit 6 like ISO (MGI:MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:MGI:3828348 NCBI chrNW_004955433:2,206,462...2,290,773
Ensembl chrNW_004955433:2,213,444...2,316,049
JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401, PMID:30197295 NCBI chrNW_004955433:11,424,069...11,834,955
Ensembl chrNW_004955433:11,424,176...11,813,771
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508
JBrowse link
G Mettl14 methyltransferase like 14 ISO (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5927282|PMID:28965759) UniProtKB PMID:24394384, PMID:28965759 MGI:MGI:5559905, MGI:MGI:5927282 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730
JBrowse link
G Mettl16 methyltransferase like 16 ISO (MGI:MGI:6114846|PMID:29262316) UniProtKB PMID:29262316 MGI:MGI:6114846 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067
JBrowse link
G Mettl3 methyltransferase like 3 ISO (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5621227|PMID:25569111), (MGI:MGI:5621254|PMID:25456834), (MGI:MGI:5927282|PMID:28965759), (MGI:MGI:6094929|PMID:28792938), (MGI:MGI:6095345|PMID:28637692) UniProtKB PMID:24394384, PMID:25456834, PMID:25569111, PMID:28637692, PMID:28792938, PMID:28965759 MGI:MGI:5559905, MGI:MGI:5621227, MGI:MGI:5621254, MGI:MGI:5927282, MGI:MGI:6094929, MGI:MGI:6095345 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Pum1 pumilio RNA binding family member 1 ISO (MGI:MGI:5640888|PMID:25768905) UniProtKB PMID:25768905 MGI:MGI:5640888 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066
JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) UniProtKB PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 ISO (MGI:MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:MGI:6271078 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:MGI:6271078 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 ISO (PMID:28106072)
(MGI:MGI:6316439|PMID:29855337), (MGI:MGI:6316688|PMID:30065315), (MGI:MGI:6317061|PMID:30150673)
(PMID:27558897), (PMID:30559377), (PMID:30930054)
UniProtKB
UniProt
PMID:27558897, PMID:28106072, PMID:29855337, PMID:30065315, PMID:30150673, PMID:30559377, PMID:30930054 MGI:MGI:6316439, MGI:MGI:6316688, MGI:MGI:6317061 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein 3 ISO (PMID:28106072) UniProtKB PMID:28106072 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067
JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO (PMID:11350920) BHF-UCL PMID:11350920 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Endog endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chrNW_004955570:1,200,461...1,203,566
Ensembl chrNW_004955570:1,200,996...1,203,566
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351
JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 ISO RGD PMID:15125883 RGD:10402776 NCBI chrNW_004955456:6,795,560...6,802,147
Ensembl chrNW_004955456:6,795,604...6,800,845
JBrowse link
G Il6 interleukin 6 ISO (PMID:28433754) ARUK-UCL PMID:28433754 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Eno1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004955486:4,275,371...4,287,152
Ensembl chrNW_004955486:4,274,238...4,289,809
JBrowse link
G Il4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004955414:13,867,880...13,878,040 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:MGI:5306739 NCBI chrNW_004955453:5,680,418...5,913,236
Ensembl chrNW_004955453:5,680,211...5,911,589
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004955449:3,093,603...3,182,513
Ensembl chrNW_004955449:3,093,603...3,186,737
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Taz tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791
JBrowse link
G Tmsb4x thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004955544:266,397...268,447
Ensembl chrNW_004955544:266,397...268,447
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Vcp valosin containing protein ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168 member A ISO (PMID:25260657) UniProtKB PMID:25260657 NCBI chrNW_004955414:17,877,179...18,071,977
Ensembl chrNW_004955414:17,876,904...18,071,966
JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:18973764) UniProtKB PMID:18973764 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073
JBrowse link
positive regulation of chromatin-mediated maintenance of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:MGI:5428344 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 ZFP36 ring finger protein ISO (PMID:16364915) UniProtKB PMID:16364915 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
positive regulation of deoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen ISO (PMID:19443450) UniProtKB PMID:19443450 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 ISO RGD PMID:19254952 RGD:5509898 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G C3ar1 complement C3a receptor 1 ISO RGD PMID:23713944 RGD:7411623 NCBI chrNW_004955413:6,707,003...6,715,689
Ensembl chrNW_004955413:6,707,689...6,715,689
JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:17267544 RGD:2303063 NCBI chrNW_004955428:25,583,501...25,880,395 JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16005543 RGD:5131269 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100
JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:22446327 RGD:10401140 NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:16774925) UniProtKB PMID:16774925 NCBI chrNW_004955428:17,840,554...17,894,779 JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 ISO (PMID:21653700) UniProtKB PMID:21653700 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971
JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:16937468 RGD:9685728 NCBI chrNW_004955442:15,280,753...15,283,405
Ensembl chrNW_004955442:15,281,419...15,283,266
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:12721208 RGD:10045365 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hgf hepatocyte growth factor ISO (PMID:2531289) UniProtKB PMID:2531289 NCBI chrNW_004955410:4,114,280...4,181,953
Ensembl chrNW_004955410:4,114,778...4,182,058
JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO RGD PMID:20439821 RGD:7829726 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (PMID:9924025) UniProtKB PMID:9924025 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Nox4 NADPH oxidase 4 ISO (MGI:MGI:5009390|PMID:17942966) UniProtKB PMID:17942966 MGI:MGI:5009390 NCBI chrNW_004955414:4,062,337...4,220,032
Ensembl chrNW_004955414:4,062,081...4,212,746
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 ISO RGD PMID:12890786 RGD:7775030 NCBI chrNW_004955490:4,538,933...4,833,851
Ensembl chrNW_004955490:4,545,457...4,662,862
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:16530387), (PMID:17942966), (PMID:19019919) UniProtKB PMID:10644978, PMID:10734101, PMID:11788434, PMID:12070119, PMID:16530387, PMID:17942966, PMID:19019919 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO (MGI:MGI:5284758|PMID:19019919) UniProtKB PMID:19019919 MGI:MGI:5284758 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Prkd2 protein kinase D2 ISO (MGI:MGI:5306299|PMID:17226786) UniProtKB PMID:17226786 MGI:MGI:5306299 NCBI chrNW_004955574:723,933...750,794
Ensembl chrNW_004955574:723,933...750,793
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:21451101 RGD:10041071 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Rgcc regulator of cell cycle ISO PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chrNW_004955518:4,788,857...4,800,273
Ensembl chrNW_004955518:4,788,656...4,801,204
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (PMID:16774925) UniProtKB PMID:16774925 NCBI chrNW_004955411:4,729,753...4,822,140
Ensembl chrNW_004955411:4,729,706...4,822,140
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO PMID:16530387 UniProt PMID:16530387 RGD:8553998 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9395232 RGD:14696805 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:16774925) UniProtKB PMID:16774925 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:27895165 RGD:12879393 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
positive regulation of DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud4 OTU deubiquitinase 4 ISO (PMID:25944111) UniProtKB PMID:25944111 NCBI chrNW_004955428:1,062,998...1,108,711
Ensembl chrNW_004955428:1,062,998...1,115,415
JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 ISO (MGI:MGI:5762940|PMID:23560077) UniProtKB PMID:23560077 MGI:MGI:5762940 NCBI chrNW_004955441:13,926,926...13,969,316
Ensembl chrNW_004955441:13,925,403...13,969,052
JBrowse link
G Tox thymocyte selection associated high mobility group box ISO (MGI:MGI:3045816|PMID:15078895) UniProt PMID:15078895 MGI:MGI:3045816 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167
JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISO (PMID:25944111) UniProtKB PMID:25944111 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked ISO (PMID:25944111) UniProtKB PMID:25944111 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
positive regulation of DNA ligase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 ISO (PMID:9600082) CACAO PMID:9600082 NCBI chrNW_004955431:15,373,207...15,377,339 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO (PMID:28002403) UniProtKB PMID:28002403 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839
JBrowse link
positive regulation of DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor ISO (PMID:21211721) MGI PMID:21211721 NCBI chrNW_004955424:16,338,546...16,449,074
Ensembl chrNW_004955424:16,336,228...16,448,766
JBrowse link
G Hmgb1 high mobility group box 1 ISO PMID:10866811 UniProt PMID:10866811 RGD:10449519 NCBI chrNW_004955431:15,373,207...15,377,339 JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 ISO (PMID:21211721) MGI PMID:21211721 NCBI chrNW_004955532:3,591,484...3,597,549
Ensembl chrNW_004955532:3,591,499...3,597,549
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:8929543) UniProtKB PMID:8929543 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
positive regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 ISO RGD PMID:15744063 RGD:2316072 NCBI chrNW_004955433:2,981,113...3,043,894
Ensembl chrNW_004955433:2,977,513...3,044,446
JBrowse link
G Hmgb2 high mobility group box 2 ISO RGD PMID:8432381 RGD:2316096 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:19507001 RGD:2311507 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666
JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:11481036 RGD:1600909 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 ISO lesser effect than Npm1 RGD PMID:11481036 RGD:1600909 NCBI chrNW_004955403:45,517,426...45,539,216
Ensembl chrNW_004955403:45,517,396...45,539,274
JBrowse link
G Oga O-GlcNAcase ISO RGD PMID:19139380 RGD:2305938 NCBI chrNW_004955485:8,477,615...8,509,386
Ensembl chrNW_004955485:8,478,060...8,507,420
JBrowse link
G Pfn1 profilin 1 ISO RGD PMID:10966486 RGD:2324858 NCBI chrNW_004955467:10,357,838...10,360,651
Ensembl chrNW_004955467:10,357,838...10,360,651
JBrowse link
positive regulation of DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3l DNA methyltransferase 3 like ISO (MGI:MGI:5553039|PMID:24074865) UniProtKB PMID:24074865 MGI:MGI:5553039 NCBI chrNW_004955407:41,177,582...41,186,965 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO (PMID:23960241) BHF-UCL PMID:23960241 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (PMID:19786833) BHF-UCL PMID:19786833 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:23042785) ARUK-UCL PMID:23042785 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
positive regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 ISO (MGI:MGI:6358520|PMID:31453335) ARUK-UCL PMID:31453335 MGI:MGI:6358520 NCBI chrNW_004955573:531,277...552,703
Ensembl chrNW_004955573:535,854...552,505
JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProtKB PMID:17525340, PMID:17643121, PMID:19261748 NCBI chrNW_004955474:6,252,321...6,265,518
Ensembl chrNW_004955474:6,252,321...6,265,286
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO PMID:19282473
(MGI:MGI:3698695|PMID:17121854)
UniProt
UniProtKB
PMID:17121854, PMID:19282473 MGI:MGI:3698695, RGD:8553580 NCBI chrNW_004955414:22,121,867...22,137,849
Ensembl chrNW_004955414:22,117,470...22,137,849
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 ISO (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProtKB PMID:19261746, PMID:19261748, PMID:19261749 NCBI chrNW_004955524:939,250...944,457 JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 ISO (PMID:19261748) UniProtKB PMID:19261748 NCBI chrNW_004955469:9,831,488...10,246,631
Ensembl chrNW_004955469:9,831,488...10,246,899
JBrowse link
G Brca1 BRCA1 DNA repair associated ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProtKB PMID:17525340, PMID:17643121, PMID:19261748 NCBI chrNW_004955451:16,819,463...16,870,780 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProtKB PMID:17525341, PMID:19261746, PMID:19261748 NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23572236 RGD:9586727 NCBI chrNW_004955506:3,035,510...3,038,204
Ensembl chrNW_004955506:3,035,621...3,040,354
JBrowse link
G Cebpg CCAAT enhancer binding protein gamma ISO (PMID:16255782) UniProtKB PMID:16255782 NCBI chrNW_004955468:3,137,106...3,141,733
Ensembl chrNW_004955468:3,137,106...3,141,733
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:24049074) UniProtKB PMID:24049074 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:17115032) UniProtKB PMID:17115032 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:22483866) UniProt PMID:22483866 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (PMID:19234442) UniProtKB PMID:19234442 NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 ISO (PMID:19234442) UniProtKB PMID:19234442 NCBI chrNW_004955452:7,148,762...7,273,886
Ensembl chrNW_004955452:7,150,886...7,255,159
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:14975937) UniProtKB PMID:14975937 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chrNW_004955477:7,103,035...7,375,073
Ensembl chrNW_004955477:7,102,977...7,376,530
JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (PMID:18819933) UniProtKB PMID:18819933 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chrNW_004955556:435,264...539,935
Ensembl chrNW_004955556:435,027...535,941
JBrowse link
G Pcna proliferating cell nuclear antigen ISO (PMID:24939902) UniProtKB PMID:24939902 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
JBrowse link
G Rnf168 ring finger protein 168 ISO (PMID:19203578), (PMID:19203579)
(PMID:23760478)
UniProtKB PMID:19203578, PMID:19203579, PMID:23760478 NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426
JBrowse link
G Rnf8 ring finger protein 8 ISO (PMID:18001824), (PMID:18001825) UniProtKB PMID:18001824, PMID:18001825 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:23911537) UniProtKB PMID:23911537 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:19934257) UniProtKB PMID:19934257 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (PMID:24790221) UniProtKB PMID:24790221 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (PMID:25928429) UniProtKB PMID:25928429 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
G Tmem161a transmembrane protein 161A ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004955524:2,667,089...2,674,550
Ensembl chrNW_004955524:2,666,885...2,674,215
JBrowse link
G Trim28 tripartite motif containing 28 ISO (PMID:17178852) UniProtKB PMID:17178852 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N ISO (PMID:16129784) HGNC PMID:16129784 NCBI chrNW_004955405:30,240,402...30,278,362 JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004955454:7,951,876...7,998,686 JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProtKB PMID:17525340, PMID:17525341, PMID:17525342, PMID:17643121, PMID:19261748 NCBI chrNW_004955408:29,154,373...29,274,817
Ensembl chrNW_004955408:29,154,629...29,274,856
JBrowse link
G Wrap53 WD repeat containing antisense to TP53 ISO (PMID:25512560) UniProtKB PMID:25512560 NCBI chrNW_004955467:9,225,506...9,240,756 JBrowse link
positive regulation of DNA repair by transcription from RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2i general transcription factor IIi ISO (PMID:9334314) ARUK-UCL PMID:9334314 NCBI chrNW_004955456:13,371,306...13,461,846
Ensembl chrNW_004955456:13,369,772...13,446,815
JBrowse link
G Prrx1 paired related homeobox 1 ISO (PMID:9334314) ARUK-UCL PMID:9334314 NCBI chrNW_004955462:6,919,905...6,991,733
Ensembl chrNW_004955462:6,919,899...6,991,733
JBrowse link
positive regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1 protection of telomeres 1 ISO (PMID:16043710) BHF-UCL PMID:16043710 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031
JBrowse link
positive regulation of DNA-dependent DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 ISO (MGI:MGI:4439421|PMID:20215406) MGI PMID:20215406 MGI:MGI:4439421 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120
JBrowse link
G Ciz1 CDKN1A interacting zinc finger protein 1 ISO (MGI:MGI:3513706|PMID:15585571)
(MGI:MGI:4439421|PMID:20215406)
MGI PMID:15585571, PMID:20215406 MGI:MGI:3513706, MGI:MGI:4439421 NCBI chrNW_004955570:716,124...732,551
Ensembl chrNW_004955570:707,637...732,980
JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955442:16,414,564...16,423,386 JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955484:7,539,887...7,542,395 JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955417:25,519,341...25,527,168 JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:8123045 RGD:11535022 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Pcna proliferating cell nuclear antigen ISO (PMID:11595739) UniProt PMID:11595739 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit ISO (PMID:10608893), (PMID:19837034), (PMID:19858216), (PMID:26123486) FlyBase PMID:10608893, PMID:19837034, PMID:19858216, PMID:26123486 NCBI chrNW_004955478:7,376,240...7,396,647
Ensembl chrNW_004955478:7,376,712...7,396,647
JBrowse link
G Rfc2 replication factor C subunit 2 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955456:13,659,122...13,671,405
Ensembl chrNW_004955456:13,659,157...13,671,181
JBrowse link
G Rfc3 replication factor C subunit 3 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955431:12,071,465...12,084,570
Ensembl chrNW_004955431:12,069,204...12,084,577
JBrowse link
G Rfc4 replication factor C subunit 4 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955420:20,948,549...20,967,845
Ensembl chrNW_004955420:20,948,549...20,967,845
JBrowse link
G Rfc5 replication factor C subunit 5 ISO (PMID:12930902) UniProtKB PMID:12930902 NCBI chrNW_004955455:13,325,912...13,337,241
Ensembl chrNW_004955455:13,326,271...13,338,050
JBrowse link
positive regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor ISO (PMID:22144908) UniProtKB PMID:22144908 NCBI chrNW_004955506:1,278,230...1,282,064
Ensembl chrNW_004955506:1,278,471...1,281,772
JBrowse link
G Ddx39b DExD-box helicase 39B ISO (PMID:22144908) UniProtKB PMID:22144908 NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 ISO (PMID:10882741) UniProtKB PMID:10882741 NCBI chrNW_004955416:10,223,213...10,226,978
Ensembl chrNW_004955416:10,198,508...10,226,120
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:9326587) UniProtKB PMID:9326587 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Kat7 lysine acetyltransferase 7 ISO (MGI:MGI:6392952|PMID:31827282) UniProt PMID:31827282 MGI:MGI:6392952 NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992
JBrowse link
G Scaf8 SR-related CTD associated factor 8 ISO (PMID:31104839) UniProt PMID:31104839 NCBI chrNW_004955439:7,282,264...7,361,855
Ensembl chrNW_004955439:7,282,264...7,333,560
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit ISO (PMID:9450929) UniProtKB PMID:9450929 NCBI chrNW_004955451:4,682,308...4,688,008
Ensembl chrNW_004955451:4,682,311...4,688,008
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO (PMID:9450929) UniProtKB PMID:9450929 NCBI chrNW_004955468:95,997...123,005
Ensembl chrNW_004955468:95,181...123,147
JBrowse link
G Thoc1 THO complex 1 ISO (PMID:22144908) UniProtKB PMID:22144908 NCBI chrNW_004955402:9,675,211...9,708,045
Ensembl chrNW_004955402:9,675,204...9,708,045
JBrowse link
G Thoc5 THO complex 5 ISO (PMID:22144908) UniProtKB PMID:22144908 NCBI chrNW_004955455:3,761,933...3,795,517
Ensembl chrNW_004955455:3,761,874...3,795,517
JBrowse link
positive regulation of DNA-templated transcription, initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bclaf1 BCL2 associated transcription factor 1 ISO (PMID:17938203) UniProtKB PMID:17938203 NCBI chrNW_004955439:608,849...641,005
Ensembl chrNW_004955439:608,861...641,005
JBrowse link
G Cebpa CCAAT enhancer binding protein alpha ISO (PMID:28186500) UniProtKB PMID:28186500 NCBI chrNW_004955468:3,046,544...3,049,217
Ensembl chrNW_004955468:3,047,931...3,049,080
JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:MGI:5428344 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit ISO (PMID:23027619) CACAO PMID:23027619 NCBI chrNW_004955422:19,425,741...19,431,801
Ensembl chrNW_004955422:19,423,591...19,433,885
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:23027619) CACAO PMID:23027619 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Mitf melanocyte inducing transcription factor ISO (PMID:12204775), (PMID:8995290) CACAO PMID:8995290, PMID:12204775 NCBI chrNW_004955421:17,948,117...18,157,379
Ensembl chrNW_004955421:17,947,277...18,154,090
JBrowse link
G Setx senataxin ISO (PMID:21700224) UniProtKB PMID:21700224 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17332325) CACAO PMID:17332325 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
positive regulation of DNA-templated transcription, termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setx senataxin ISO (PMID:19515850) UniProtKB PMID:19515850 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 ISO (PMID:23797032) UniProtKB PMID:23797032 NCBI chrNW_004955524:1,932,988...1,957,231
Ensembl chrNW_004955524:1,932,729...1,957,231
JBrowse link
G Fmn2 formin 2 ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004955406:11,358,585...11,666,102 JBrowse link
G Foxm1 forkhead box M1 ISO (MGI:MGI:3698692|PMID:17101782)
(PMID:17101782)
UniProtKB PMID:17101782 MGI:MGI:3698692 NCBI chrNW_004955429:18,392,545...18,405,254
Ensembl chrNW_004955429:18,393,470...18,405,254
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chrNW_004955477:7,103,035...7,375,073
Ensembl chrNW_004955477:7,102,977...7,376,530
JBrowse link
G Nudt16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 ISO (PMID:25931565) UniProtKB PMID:25931565 NCBI chrNW_004955418:17,756,610...17,818,552
Ensembl chrNW_004955418:17,756,861...17,810,663
JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 ISO (PMID:25931565) UniProtKB PMID:25931565 NCBI chrNW_004955485:9,221,419...9,269,308 JBrowse link
G Spidr scaffold protein involved in DNA repair ISO (PMID:23509288) UniProtKB PMID:23509288 NCBI chrNW_004955454:7,360,144...7,710,077
Ensembl chrNW_004955454:7,359,670...7,711,680
JBrowse link
G Spire1 spire type actin nucleation factor 1 ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004955402:920,730...1,011,339
Ensembl chrNW_004955402:920,308...1,011,332
JBrowse link
G Spire2 spire type actin nucleation factor 2 ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004955541:3,341,705...3,359,646
Ensembl chrNW_004955541:3,341,702...3,361,320
JBrowse link
G Timeless timeless circadian regulator ISO (PMID:23797032) UniProtKB PMID:23797032 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Wrap53 WD repeat containing antisense to TP53 ISO (PMID:27715493) UniProtKB PMID:27715493 NCBI chrNW_004955467:9,225,506...9,240,756 JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 ISO (MGI:MGI:6358520|PMID:31453335), (MGI:MGI:6442007|PMID:32374261), (MGI:MGI:6443266|PMID:32352380), (PMID:32744506) ARUK-UCL PMID:31453335, PMID:32352380, PMID:32374261, PMID:32744506 MGI:MGI:6358520, MGI:MGI:6442007, MGI:MGI:6443266 NCBI chrNW_004955573:531,277...552,703
Ensembl chrNW_004955573:535,854...552,505
JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004955424:19,293,949...19,333,170
Ensembl chrNW_004955424:19,293,949...19,333,170
JBrowse link
G Arid2 AT-rich interaction domain 2 ISO (PMID:28381560) CACAO PMID:28381560 NCBI chrNW_004955500:4,998,555...5,177,180
Ensembl chrNW_004955500:4,998,555...5,175,776
JBrowse link
G Blm BLM RecQ like helicase ISO (MGI:MGI:5648586|PMID:25520194) MGI PMID:25520194 MGI:MGI:5648586 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:25820262) UniProt PMID:25820262 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Fancb FA complementation group B ISO (MGI:MGI:5648586|PMID:25520194) MGI PMID:25520194 MGI:MGI:5648586 NCBI chrNW_004955519:3,337,138...3,364,963
Ensembl chrNW_004955519:3,343,446...3,363,814
JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component ISO (PMID:29225034) UniProtKB PMID:29225034 NCBI chrNW_004955507:3,593,413...3,623,781
Ensembl chrNW_004955507:3,593,413...3,623,781
JBrowse link
G Mrnip MRN complex interacting protein ISO (PMID:27568553) UniProtKB PMID:27568553 NCBI chrNW_004955408:726,124...758,851 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098, PMID:30356214 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Rad51ap1 RAD51 associated protein 1 ISO (PMID:17996710), (PMID:17996711) UniProt PMID:17996710, PMID:17996711 NCBI chrNW_004955413:2,335,431...2,362,781
Ensembl chrNW_004955413:2,334,911...2,361,806
JBrowse link
G Timeless timeless circadian regulator ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098, PMID:30356214 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Was WASP actin nucleation promoting factor ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004955543:243,618...253,489
Ensembl chrNW_004955543:247,631...253,274
JBrowse link
G Wdr48 WD repeat domain 48 ISO (PMID:27239033), (PMID:27463890) UniProt PMID:27239033, PMID:27463890 NCBI chrNW_004955427:24,873,616...24,917,691
Ensembl chrNW_004955427:24,873,616...24,917,691
JBrowse link
G Wrap53 WD repeat containing antisense to TP53 ISO (PMID:25512560) UniProtKB PMID:25512560 NCBI chrNW_004955467:9,225,506...9,240,756 JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:28525742) UniProtKB PMID:28525742 NCBI chrNW_004955427:21,806,170...21,812,701
Ensembl chrNW_004955427:21,806,192...21,815,031
JBrowse link
G Fh fumarate hydratase ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004955406:10,535,801...10,558,649
Ensembl chrNW_004955406:10,535,323...10,561,627
JBrowse link
G Kdm4d lysine demethylase 4D ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004955605:7,585...32,650
Ensembl chrNW_004955605:8,977...10,539
JBrowse link
G Kmt5b lysine methyltransferase 5B ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004955422:17,626,606...17,684,890
Ensembl chrNW_004955422:17,647,530...17,682,132
JBrowse link
G Kmt5c lysine methyltransferase 5C ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004955567:895,334...901,240
Ensembl chrNW_004955567:894,608...900,578
JBrowse link
G LOC102020128 histone-lysine N-methyltransferase SETMAR ISO (PMID:20620605), (PMID:21491884) UniProtKB PMID:20620605, PMID:21491884 NCBI chrNW_004955421:9,066,906...9,080,352 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:29656893) UniProtKB PMID:29656893 NCBI chrNW_004955486:2,191,903...2,197,193
Ensembl chrNW_004955486:2,191,903...2,198,538
JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 ISO (PMID:24598253) UniProt PMID:24598253 NCBI chrNW_004955532:3,591,484...3,597,549
Ensembl chrNW_004955532:3,591,499...3,597,549
JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 ISO (PMID:28525742) UniProtKB PMID:28525742 NCBI chrNW_004955427:21,770,158...21,806,091
Ensembl chrNW_004955427:21,770,577...21,804,717
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:12032095) CACAO PMID:12032095 NCBI chrNW_004955559:1,064,924...1,070,120 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (MGI:MGI:5468037|PMID:23306437), (MGI:MGI:5476381|PMID:23333305)
(PMID:28241136)
UniProtKB PMID:23306437, PMID:23333305, PMID:28241136 MGI:MGI:5468037, MGI:MGI:5476381 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
JBrowse link
G Shld1 shieldin complex subunit 1 ISO (PMID:29656893) UniProtKB PMID:29656893 NCBI chrNW_004955415:16,180,074...16,282,937
Ensembl chrNW_004955415:16,180,051...16,280,864
JBrowse link
G Shld2 shieldin complex subunit 2 ISO (PMID:29656893), (PMID:29789392) UniProtKB PMID:29656893, PMID:29789392 NCBI chrNW_004955510:6,021,477...6,114,745
Ensembl chrNW_004955510:6,075,510...6,114,898
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (PMID:25294876) UniProtKB PMID:25294876 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067
JBrowse link
G Top2b DNA topoisomerase II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012
JBrowse link
G Wrap53 WD repeat containing antisense to TP53 ISO (PMID:25512560) UniProtKB PMID:25512560 NCBI chrNW_004955467:9,225,506...9,240,756 JBrowse link
positive regulation of endodeoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:20605787) UniProtKB PMID:20605787 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Ddx11 DEAD/H-box helicase 11 ISO (PMID:18499658) UniProtKB PMID:18499658 NCBI chrNW_004955524:1,932,988...1,957,231
Ensembl chrNW_004955524:1,932,729...1,957,231
JBrowse link
G Prkcd protein kinase C delta ISO (PMID:19059439) UniProtKB PMID:19059439 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:18973764) UniProtKB PMID:18973764 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chrNW_004955523:1,407,812...1,441,829
Ensembl chrNW_004955523:1,421,749...1,441,829
JBrowse link
G Esrrb estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004955438:365,375...534,086
Ensembl chrNW_004955438:365,137...534,666
JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004955456:7,784,269...7,838,260
Ensembl chrNW_004955456:7,783,760...7,842,129
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 ISO (MGI:MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:MGI:1927687 NCBI chrNW_004955547:676,661...683,906
Ensembl chrNW_004955547:676,342...690,777
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO (MGI:MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:MGI:3766710 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Igf1 insulin like growth factor 1 ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Ins insulin ISO (PMID:7688386)
(PMID:381941)
BHF-UCL PMID:381941, PMID:7688386 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Insr insulin receptor ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460
JBrowse link
G Mlxipl MLX interacting protein like ISO (MGI:MGI:3041761|PMID:15118080)
(PMID:19995986)
BHF-UCL PMID:15118080, PMID:19995986 MGI:MGI:3041761 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (PMID:22898868) CACAO PMID:22898868 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197
JBrowse link
G Psen1 presenilin 1 ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Slc4a4 solute carrier family 4 member 4 ISO (MGI:MGI:5295108|PMID:21976511)
(PMID:21976511)
ARUK-UCL PMID:21976511 MGI:MGI:5295108 NCBI chrNW_004955447:1,599,986...1,900,791
Ensembl chrNW_004955447:1,599,929...1,900,791
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5913553|PMID:28327662) UniProtKB PMID:28327662 MGI:MGI:5913553 NCBI chrNW_004955427:14,409,700...15,231,495
Ensembl chrNW_004955427:14,409,700...14,453,926
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor ISO (MGI:MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:MGI:3794903 NCBI chrNW_004955467:1,342,271...1,363,149
Ensembl chrNW_004955467:1,342,271...1,363,138
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chrNW_004955437:8,370,553...8,382,640
Ensembl chrNW_004955437:8,376,091...8,382,640
JBrowse link
G Nos3 nitric oxide synthase 3 ISO (PMID:17502619) BHF-UCL PMID:17502619 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 ISO (MGI:MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309
JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 ISO (MGI:MGI:5009766|PMID:21255825) MGI PMID:21255825 MGI:MGI:5009766 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395
JBrowse link
G Exosc6 exosome component 6 ISO (MGI:MGI:5009766|PMID:21255825) MGI PMID:21255825 MGI:MGI:5009766 NCBI chrNW_004955484:3,088,133...3,089,551
Ensembl chrNW_004955484:3,088,624...3,089,472
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific ISO (MGI:MGI:6393148|PMID:31806351) UniProt PMID:31806351 MGI:MGI:6393148 NCBI chrNW_004955429:13,616,647...13,638,657
Ensembl chrNW_004955429:13,616,647...13,661,389
JBrowse link
G Kmt5b lysine methyltransferase 5B ISO (MGI:MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:MGI:6370097 NCBI chrNW_004955422:17,626,606...17,684,890
Ensembl chrNW_004955422:17,647,530...17,682,132
JBrowse link
G Kmt5c lysine methyltransferase 5C ISO (MGI:MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:MGI:6370097 NCBI chrNW_004955567:895,334...901,240
Ensembl chrNW_004955567:894,608...900,578
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:29656893) UniProtKB PMID:29656893 NCBI chrNW_004955486:2,191,903...2,197,193
Ensembl chrNW_004955486:2,191,903...2,198,538
JBrowse link
G Paxip1 PAX interacting protein 1 ISO (MGI:MGI:4821506|PMID:20671152) UniProtKB PMID:20671152 MGI:MGI:4821506 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (MGI:MGI:5468036|PMID:23306439), (MGI:MGI:5476381|PMID:23333305), (MGI:MGI:5490831|PMID:23333306) UniProtKB PMID:23306439, PMID:23333305, PMID:23333306 MGI:MGI:5468036, MGI:MGI:5476381, MGI:MGI:5490831 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
JBrowse link
G Shld1 shieldin complex subunit 1 ISO (PMID:29656893) UniProtKB PMID:29656893 NCBI chrNW_004955415:16,180,074...16,282,937
Ensembl chrNW_004955415:16,180,051...16,280,864
JBrowse link
G Shld2 shieldin complex subunit 2 ISO (PMID:29656893) UniProtKB PMID:29656893 NCBI chrNW_004955510:6,021,477...6,114,745
Ensembl chrNW_004955510:6,075,510...6,114,898
JBrowse link
G Tfrc transferrin receptor ISO (PMID:26642240) UniProtKB PMID:26642240 NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO (PMID:23345425)
(MGI:MGI:3041657|PMID:15077110), (MGI:MGI:3046005|PMID:15159415)
(PMID:23760478)
UniProtKB PMID:15077110, PMID:15159415, PMID:23345425, PMID:23760478 MGI:MGI:3041657, MGI:MGI:3046005 NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Msh2 mutS homolog 2 ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 ISO (MGI:MGI:5462481|PMID:23241889) MGI PMID:23241889 MGI:MGI:5462481 NCBI chrNW_004955514:1,084,522...1,162,624
Ensembl chrNW_004955514:1,069,085...1,162,624
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin like cytokine factor 1 ISO (MGI:MGI:3777853|PMID:12023368) BHF-UCL PMID:12023368 MGI:MGI:3777853 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628
JBrowse link
G Il4 interleukin 4 ISO (MGI:MGI:3037416|PMID:14988498) MGI PMID:14988498 MGI:MGI:3037416 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Stat6 signal transducer and activator of transcription 6 ISO (MGI:MGI:1345885|PMID:10490661) MGI PMID:10490661 MGI:MGI:1345885 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273
JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 ISO (MGI:MGI:5763555|PMID:25404367) MGI PMID:25404367 MGI:MGI:5763555 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742
JBrowse link
G Cd28 CD28 molecule ISO (MGI:MGI:62368|PMID:7688139) MGI PMID:7688139 MGI:MGI:62368 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991
JBrowse link
G Cd40 CD40 molecule ISO (MGI:MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:MGI:2670820 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093
JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:MGI:2670820 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Il2 interleukin 2 ISO (MGI:MGI:87443|PMID:1830926) MGI PMID:1830926 MGI:MGI:87443 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265
JBrowse link
G Il4 interleukin 4 ISO (MGI:MGI:2670820|PMID:12882831), (MGI:MGI:3037416|PMID:14988498) MGI PMID:12882831, PMID:14988498 MGI:MGI:2670820, MGI:MGI:3037416 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Mlh1 mutL homolog 1 ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Msh2 mutS homolog 2 ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 ISO (MGI:MGI:5752090|PMID:26744420) UniProtKB PMID:26744420 MGI:MGI:5752090 NCBI chrNW_004955493:7,142,048...7,144,836
Ensembl chrNW_004955493:7,142,272...7,144,389
JBrowse link
G Paxip1 PAX interacting protein 1 ISO (MGI:MGI:5752090|PMID:26744420) UniProtKB PMID:26744420 MGI:MGI:5752090 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO (MGI:MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:MGI:1342394 NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C ISO (MGI:MGI:85031|PMID:9015183) MGI PMID:9015183 MGI:MGI:85031 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552
JBrowse link
G Tbx21 T-box transcription factor 21 ISO (MGI:MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:MGI:2670820 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937
JBrowse link
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 ISO (MGI:MGI:6316415|PMID:31003867), (MGI:MGI:6316551|PMID:31000436) UniProt PMID:31000436, PMID:31003867 MGI:MGI:6316415, MGI:MGI:6316551 NCBI chrNW_004955425:25,483,400...25,647,904
Ensembl chrNW_004955425:25,483,715...25,626,546
JBrowse link
positive regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lin28b lin-28 homolog B ISO (PMID:18951094) CACAO PMID:18951094 NCBI chrNW_004955411:30,381,208...30,499,678 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:20547861) UniProtKB PMID:20547861 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (PMID:22055188), (PMID:24048733) UniProtKB PMID:22055188, PMID:24048733 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
positive regulation of miRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:4868529|PMID:20975942) MGI PMID:20975942 MGI:MGI:4868529 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO (PMID:22357537) BHF-UCL PMID:22357537 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:22357537) BHF-UCL PMID:22357537 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 ISO (PMID:26221039) UniProt PMID:26221039 NCBI chrNW_004955413:33,272,600...33,277,893
Ensembl chrNW_004955413:33,272,714...33,277,686
JBrowse link
G Hmgb1 high mobility group box 1 ISO (PMID:15014079) UniProtKB PMID:15014079 NCBI chrNW_004955431:15,373,207...15,377,339 JBrowse link
G Prkcg protein kinase C gamma ISO (PMID:15808853) HGNC PMID:15808853 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grsf1 G-rich RNA sequence binding factor 1 ISO (PMID:29967381) UniProt PMID:29967381 NCBI chrNW_004955447:2,181,841...2,194,650
Ensembl chrNW_004955447:2,181,839...2,194,650
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:19509288), (PMID:29967381) UniProt PMID:19509288, PMID:29967381 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992
JBrowse link
G Supv3l1 Suv3 like RNA helicase ISO (PMID:19864255)
(PMID:19509288), (PMID:29967381)
UniProtKB
UniProt
PMID:19509288, PMID:19864255, PMID:29967381 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362
JBrowse link
positive regulation of mitochondrial transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 ISO (MGI:MGI:5920587|PMID:28585542) UniProt PMID:28585542 MGI:MGI:5920587 NCBI chrNW_004955455:8,472,833...8,474,745
Ensembl chrNW_004955455:8,472,833...8,479,129
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:MGI:6120139|PMID:23283301) UniProtKB PMID:23283301 MGI:MGI:6120139 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Sirt3 sirtuin 3 ISO (MGI:MGI:6120139|PMID:23283301) UniProtKB PMID:23283301 MGI:MGI:6120139 NCBI chrNW_004955476:11,794,951...11,826,244 JBrowse link
positive regulation of mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 ISO c-mos polyadenylation RGD PMID:15291744 RGD:1578405 NCBI chrNW_004955446:140,661...149,500
Ensembl chrNW_004955446:140,093...149,500
JBrowse link
G Cdc73 cell division cycle 73 ISO (PMID:19136632) UniProtKB PMID:19136632 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (PMID:27940037) UniProt PMID:27940037 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO (PMID:21329879) UniProtKB PMID:21329879 NCBI chrNW_004955409:2,711,475...2,727,879
Ensembl chrNW_004955409:2,711,564...2,727,755
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO (PMID:9342333) UniProtKB PMID:9342333 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO (PMID:9342333) UniProtKB PMID:9342333 NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO (PMID:21329879) UniProtKB PMID:21329879 NCBI chrNW_004955468:166,477...172,200 JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex subunit 1 ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545
JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 ISO (PMID:23386060), (PMID:25038453) BHF-UCL PMID:23386060, PMID:25038453 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077
JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004955408:9,112,208...9,132,650
Ensembl chrNW_004955408:9,112,208...9,132,758
JBrowse link
G Gtpbp1 GTP binding protein 1 ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chrNW_004955413:24,823,113...24,849,522
Ensembl chrNW_004955413:24,823,113...24,852,691
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508
JBrowse link
G Khsrp KH-type splicing regulatory protein ISO (PMID:16126846) UniProtKB PMID:16126846 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:16410805) RGD
UniProtKB
PMID:737213, PMID:16410805 RGD:11554176 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992
JBrowse link
G Prr5l proline rich 5 like ISO (PMID:21964062) UniProtKB PMID:21964062 NCBI chrNW_004955422:9,972,588...10,069,411
Ensembl chrNW_004955422:9,972,588...10,048,669
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 ISO (MGI:MGI:6154479|PMID:25026077)
(MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671)
UniProtKB PMID:25026077, PMID:26000482, PMID:26255671 MGI:MGI:5706859, MGI:MGI:5751631, MGI:MGI:6154479 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase ISO (PMID:25225333), (PMID:26255671)
(PMID:24726324)
CAFA
UniProt
PMID:24726324, PMID:25225333, PMID:26255671 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (PMID:19909337)
(MGI:MGI:3842851|PMID:19322177), (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5706909|PMID:23185455), (MGI:MGI:5751631|PMID:26255671)
UniProtKB PMID:19322177, PMID:19909337, PMID:23185455, PMID:26000482, PMID:26255671 MGI:MGI:3842851, MGI:MGI:5706859, MGI:MGI:5706909, MGI:MGI:5751631 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21876179)
PMID:17185417
UniProtKB
UniProt
PMID:17185417, PMID:21876179 RGD:8553432 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736
JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (MGI:MGI:5795825|PMID:15634918) UniProtKB PMID:15634918 MGI:MGI:5795825 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
positive regulation of mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt21 nudix hydrolase 21 ISO (PMID:15937220) UniProtKB PMID:15937220 NCBI chrNW_004955433:14,220,356...14,234,423
Ensembl chrNW_004955433:14,216,974...14,234,611
JBrowse link
positive regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO RGD PMID:9792439 RGD:10041038 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469
JBrowse link
positive regulation of mRNA polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO (PMID:28383716) UniProtKB PMID:28383716 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (MGI:MGI:5300629|PMID:22153079) UniProtKB PMID:22153079 MGI:MGI:5300629 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:14707147) UniProtKB PMID:14707147 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351
JBrowse link
G Nudt21 nudix hydrolase 21 ISO (PMID:15937220) UniProtKB PMID:15937220 NCBI chrNW_004955433:14,220,356...14,234,423
Ensembl chrNW_004955433:14,216,974...14,234,611
JBrowse link
positive regulation of mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase RNA specific B1 ISO RGD PMID:10331393 RGD:10450893 NCBI chrNW_004955407:41,886,286...41,962,846
Ensembl chrNW_004955407:41,886,286...41,962,897
JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP Elav-like family member 3 ISO (PMID:15009664) UniProtKB PMID:15009664 NCBI chrNW_004955589:700,965...715,684
Ensembl chrNW_004955589:701,767...713,179
JBrowse link
G Celf4 CUGBP Elav-like family member 4 ISO (PMID:15009664) UniProtKB PMID:15009664 NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
JBrowse link
G Dazap1 DAZ associated protein 1 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955495:6,499,553...6,516,227
Ensembl chrNW_004955495:6,497,890...6,524,462
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO (MGI:MGI:3814796|PMID:18480465) MGI PMID:18480465 MGI:MGI:3814796 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873
JBrowse link
G Hmx2 H6 family homeobox 2 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955477:1,294,479...1,302,433
Ensembl chrNW_004955477:1,294,472...1,302,505
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Lmntd2 lamin tail domain containing 2 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955476:11,487,918...11,493,281
Ensembl chrNW_004955476:11,489,481...11,493,923
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO (PMID:23793891) CAFA PMID:23793891 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO (PMID:28221134) UniProtKB PMID:28221134 NCBI chrNW_004955414:19,499,577...19,607,075
Ensembl chrNW_004955414:19,499,406...19,607,075
JBrowse link
G Obi1 ORC ubiquitin ligase 1 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955404:28,759,640...28,803,257
Ensembl chrNW_004955404:28,758,918...28,804,972
JBrowse link
G Prdx6 peroxiredoxin 6 ISO (PMID:16186110) UniProtKB PMID:16186110 NCBI chrNW_004955406:13,717,267...13,728,216
Ensembl chrNW_004955406:13,717,267...13,728,216
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (MGI:MGI:3814796|PMID:18480465) MGI PMID:18480465 MGI:MGI:3814796 NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
JBrowse link
G Sf3b4 splicing factor 3b subunit 4 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955413:826,190...830,502
Ensembl chrNW_004955413:826,190...832,496
JBrowse link
G Slc39a5 solute carrier family 39 member 5 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955458:3,843,492...3,849,794
Ensembl chrNW_004955458:3,843,112...3,849,794
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO (MGI:MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:MGI:5532638 NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:12840015) UniProtKB PMID:12840015 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO (PMID:20123736) UniProtKB PMID:20123736 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Tra2a transformer 2 alpha homolog ISO (MGI:MGI:5304203|PMID:22194695) MGI PMID:22194695 MGI:MGI:5304203 NCBI chrNW_004955410:25,759,649...25,784,128
Ensembl chrNW_004955410:25,759,649...25,784,128
JBrowse link
G Tra2b transformer 2 beta homolog ISO (MGI:MGI:5304203|PMID:22194695)
(PMID:15009664)
MGI
UniProtKB
PMID:15009664, PMID:22194695 MGI:MGI:5304203 NCBI chrNW_004955420:21,707,618...21,728,186
Ensembl chrNW_004955420:21,707,618...21,728,186
JBrowse link
positive regulation of nuclear receptor transcription coactivator activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 ISO (PMID:18180299) UniProtKB PMID:18180299 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 ISO (PMID:18180299) UniProtKB PMID:18180299 NCBI chrNW_004955453:14,819,007...14,845,879
Ensembl chrNW_004955453:14,816,910...14,845,912
JBrowse link
G Nrbf2 nuclear receptor binding factor 2 ISO RGD PMID:10786636 RGD:61677 NCBI chrNW_004955425:16,330,115...16,336,798
Ensembl chrNW_004955425:16,330,114...16,340,621
JBrowse link
G Tacc1 transforming acidic coiled-coil containing protein 1 ISO (PMID:20078863) UniProt PMID:20078863 NCBI chrNW_004955463:14,314,201...14,409,848
Ensembl chrNW_004955463:14,344,010...14,405,174
JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 ISO (MGI:MGI:5486537|PMID:19716330) UniProtKB PMID:19716330 MGI:MGI:5486537 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861
JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 ISO (PMID:21278420) UniProtKB PMID:21278420 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545
JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 ISO (MGI:MGI:5486537|PMID:19716330)
(PMID:21278420)
UniProtKB PMID:19716330, PMID:21278420 MGI:MGI:5486537 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (PMID:14731398) UniProt PMID:14731398 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955431:23,538,224...23,540,039
Ensembl chrNW_004955431:23,538,242...23,539,051
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955574:333,007...333,529
Ensembl chrNW_004955574:333,116...333,529
JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955415:32,648,455...32,651,909
Ensembl chrNW_004955415:32,649,054...32,651,936
JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 ISO (MGI:MGI:5486537|PMID:19716330) UniProtKB PMID:19716330 MGI:MGI:5486537 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B ISO (PMID:19716330) UniProtKB PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C ISO (PMID:21984185) UniProtKB PMID:21984185 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070
JBrowse link
G Tob1 transducer of ERBB2, 1 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (MGI:MGI:5487524|PMID:21278420)
(PMID:12748283)
UniProtKB PMID:12748283, PMID:21278420 MGI:MGI:5487524 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 ISO PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 ISO (MGI:MGI:5320815|PMID:22367205) UniProtKB PMID:22367205 MGI:MGI:5320815 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 ISO (MGI:MGI:5486537|PMID:19716330) UniProtKB PMID:19716330 MGI:MGI:5486537 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO (PMID:18337750) MGI PMID:18337750 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 ISO (PMID:21278420)
(PMID:23644599)
UniProtKB
BHF-UCL
PMID:21278420, PMID:23644599 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545
JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 ISO (MGI:MGI:5486537|PMID:19716330)
(PMID:21278420)
UniProtKB PMID:19716330, PMID:21278420 MGI:MGI:5486537 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104
JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 ISO (MGI:MGI:5486537|PMID:19716330) UniProtKB PMID:19716330 MGI:MGI:5486537 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B ISO (PMID:19716330) UniProtKB PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C ISO (PMID:21984185) UniProtKB PMID:21984185 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070
JBrowse link
G Tob1 transducer of ERBB2, 1 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Zfp36 ZFP36 ring finger protein ISO (MGI:MGI:5487524|PMID:21278420)
(MGI:MGI:5795819|PMID:20595389)
(PMID:10330172)
UniProtKB PMID:10330172, PMID:20595389, PMID:21278420 MGI:MGI:5487524, MGI:MGI:5795819 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
positive regulation of nuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb2 high mobility group box 2 ISO (PMID:978439) UniProtKB PMID:978439 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
positive regulation of nucleic acid-templated transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmiz1 zinc finger MIZ-type containing 1 ISO (PMID:14609956), (PMID:16777850) UniProt PMID:14609956, PMID:16777850 NCBI chrNW_004955437:13,338,077...13,534,283
Ensembl chrNW_004955437:13,337,825...13,494,889
JBrowse link
positive regulation of pri-miRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apln apelin ISO (PMID:23263626) BHF-UCL PMID:23263626 NCBI chrNW_004955473:5,346,822...5,356,359
Ensembl chrNW_004955473:5,346,747...5,356,359
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004955424:1,775,139...1,803,106
Ensembl chrNW_004955424:1,776,127...1,802,763
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (MGI:MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:MGI:4939577 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:MGI:4939577 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (MGI:MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:MGI:4939577 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Ctcf CCCTC-binding factor ISO PMID:27124358 BHF-UCL PMID:27124358 RGD:11344932 NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927
JBrowse link
G Egr1 early growth response 1 ISO (PMID:19307576) ARUK-UCL PMID:19307576 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO (PMID:21711453) BHF-UCL PMID:21711453 NCBI chrNW_004955412:29,433,730...29,602,389
Ensembl chrNW_004955412:29,432,482...29,545,580
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO PMID:18384814 BHF-UCL PMID:18384814 RGD:10402042 NCBI chrNW_004955523:307,181...310,728
Ensembl chrNW_004955523:305,728...310,728
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit ISO (PMID:21673316) BHF-UCL PMID:21673316 NCBI chrNW_004955422:19,425,741...19,431,801
Ensembl chrNW_004955422:19,423,591...19,433,885
JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:MGI:4881905|PMID:19933931) BHF-UCL PMID:19933931 MGI:MGI:4881905 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gata2 GATA binding protein 2 ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
JBrowse link
G Gata3 GATA binding protein 3 ISO (PMID:26451614) BHF-UCL PMID:26451614 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Gnl3 G protein nucleolar 3 ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004955430:2,675,477...2,678,113 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (PMID:19141645), (PMID:24983504)
(PMID:19782034)
ARUK-UCL PMID:19141645, PMID:19782034, PMID:24983504 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Il10 interleukin 10 ISO (MGI:MGI:6201792|PMID:23071313) ARUK-UCL PMID:23071313 MGI:MGI:6201792 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO PMID:18384814
(PMID:19962668), (PMID:24375836)
BHF-UCL PMID:18384814, PMID:19962668, PMID:24375836 RGD:10402042 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Klf4 Kruppel like factor 4 ISO (PMID:23867820) BHF-UCL PMID:23867820 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174
JBrowse link
G Klf5 Kruppel like factor 5 ISO (PMID:28408180) BHF-UCL PMID:28408180 NCBI chrNW_004955404:33,642,604...33,665,445
Ensembl chrNW_004955404:33,644,077...33,658,094
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO PMID:24676391 BHF-UCL PMID:24676391 RGD:10400879 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
G Ngfr nerve growth factor receptor ISO (PMID:26268439) BHF-UCL PMID:26268439 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO (PMID:27334923)
(MGI:MGI:5616008|PMID:25510864)
ARUK-UCL
BHF-UCL
PMID:25510864, PMID:27334923 MGI:MGI:5616008 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (PMID:19088079) BHF-UCL PMID:19088079 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO (PMID:28566713) BHF-UCL PMID:28566713 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Prl prolactin ISO (PMID:23619365) BHF-UCL PMID:23619365 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO PMID:20546595
(PMID:23619365), (PMID:26268439)
PMID:28484848
BHF-UCL PMID:20546595, PMID:23619365, PMID:26268439, PMID:28484848 RGD:12903243, RGD:13601996 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Smad1 SMAD family member 1 ISO (MGI:MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:MGI:4939577 NCBI chrNW_004955428:1,357,398...1,429,521
Ensembl chrNW_004955428:1,361,085...1,429,948
JBrowse link
G Smad3 SMAD family member 3 ISO (PMID:26311719) BHF-UCL PMID:26311719 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad4 SMAD family member 4 ISO (MGI:MGI:6094665|PMID:23426367) BHF-UCL PMID:23426367 MGI:MGI:6094665 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smad6 SMAD family member 6 ISO (MGI:MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:MGI:4939577 NCBI chrNW_004955450:9,005,332...9,070,790 JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Spi1 Spi-1 proto-oncogene ISO (PMID:20972335)
(MGI:MGI:5693226|PMID:18384814)
BHF-UCL PMID:18384814, PMID:20972335 MGI:MGI:5693226 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO (PMID:24296663)
(MGI:MGI:5501359|PMID:23823476)
BHF-UCL PMID:23823476, PMID:24296663 MGI:MGI:5501359 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO (MGI:MGI:5501359|PMID:23823476) BHF-UCL PMID:23823476 MGI:MGI:5501359 NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759
JBrowse link
G Srf serum response factor ISO (MGI:MGI:4354665|PMID:19578358), (MGI:MGI:5688838|PMID:21303526) BHF-UCL PMID:19578358, PMID:21303526 MGI:MGI:4354665, MGI:MGI:5688838 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:19390056), (PMID:23820254)
(MGI:MGI:5897552|PMID:20546595)
BHF-UCL PMID:19390056, PMID:20546595, PMID:23820254 MGI:MGI:5897552 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tead1 TEA domain transcription factor 1 ISO (PMID:26045994) BHF-UCL PMID:26045994 NCBI chrNW_004955414:28,166,562...28,341,275
Ensembl chrNW_004955414:28,175,543...28,333,856
JBrowse link
G Tert telomerase reverse transcriptase ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:26311719), (PMID:26493107) BHF-UCL PMID:26311719, PMID:26493107 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (PMID:25217442) BHF-UCL PMID:25217442 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO PMID:21704009 BHF-UCL PMID:21704009 RGD:12792988 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:22499991) BHF-UCL PMID:22499991 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:20546595)
(PMID:22499991)
BHF-UCL PMID:20546595, PMID:22499991 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:23042785) ARUK-UCL PMID:23042785 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
positive regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:21673316) BHF-UCL PMID:21673316 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Il6 interleukin 6 ISO (PMID:27252421) ARUK-UCL PMID:27252421 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Lin28a lin-28 homolog A ISO (MGI:MGI:5294254|PMID:21962509) BHF-UCL PMID:21962509 MGI:MGI:5294254 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO (PMID:24375836) BHF-UCL PMID:24375836 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 ISO (PMID:24375836) BHF-UCL PMID:24375836 NCBI chrNW_004955495:4,695,239...4,718,380 JBrowse link
G Myocd myocardin ISO (MGI:MGI:6414695|PMID:28342807) ARUK-UCL PMID:28342807 MGI:MGI:6414695 NCBI chrNW_004955467:4,653,065...4,743,438
Ensembl chrNW_004955467:4,656,380...4,743,110
JBrowse link
G Nr2f1 nuclear receptor subfamily 2 group F member 1 ISO (MGI:MGI:5574156|PMID:24349493) MGI PMID:24349493 MGI:MGI:5574156 NCBI chrNW_004955418:18,615,548...18,622,984
Ensembl chrNW_004955418:18,614,995...18,624,584
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 ISO (PMID:26020802) ARUK-UCL PMID:26020802 NCBI chrNW_004955465:10,127,907...10,167,895
Ensembl chrNW_004955465:10,128,931...10,168,399
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:26100857)
(PMID:22578566)
BHF-UCL
ARUK-UCL
PMID:22578566, PMID:26100857 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51ap1 RAD51 associated protein 1 ISO (PMID:17996711) UniProt PMID:17996711 NCBI chrNW_004955413:2,335,431...2,362,781
Ensembl chrNW_004955413:2,334,911...2,361,806
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (MGI:MGI:2450033|PMID:12556476) MGI PMID:12556476 MGI:MGI:2450033 NCBI chrNW_004955408:5,552,619...5,572,145
Ensembl chrNW_004955408:5,552,619...5,572,145
JBrowse link
positive regulation of RNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1b interleukin 1 beta ISO (PMID:29384235) ARUK-UCL PMID:29384235 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Nmd3 NMD3 ribosome export adaptor ISO (PMID:23782956) ParkinsonsUK-UCL PMID:23782956 NCBI chrNW_004955448:11,670,932...11,692,436
Ensembl chrNW_004955448:11,670,932...11,704,637
JBrowse link
positive regulation of RNA polymerase II transcription preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:62922|PMID:8215422) MGI PMID:8215422 MGI:MGI:62922 NCBI chrNW_004955410:20,428,531...20,459,482 JBrowse link
G Cand1 cullin associated and neddylation dissociated 1 ISO PMID:10567521 UniProt PMID:10567521 RGD:8553447 NCBI chrNW_004955458:13,815,819...13,850,007
Ensembl chrNW_004955458:13,815,819...13,850,007
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:16891311 RGD:1625706 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Esr1 estrogen receptor 1 ISO (PMID:9841876) CAFA PMID:9841876 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:MGI:5317044|PMID:21245044) MGI PMID:21245044 MGI:MGI:5317044 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:24289924) BHF-UCL PMID:24289924 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:MGI:3820325|PMID:19056892) MGI PMID:19056892 MGI:MGI:3820325 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
positive regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO PMID:28377597
(PMID:28377597)
ARUK-UCL PMID:28377597 RGD:13464257 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO (PMID:11779464), (PMID:19622636)
(MGI:MGI:6114871|PMID:25164867)
UniProtKB PMID:11779464, PMID:19622636, PMID:25164867 MGI:MGI:6114871 NCBI chrNW_004955478:7,720,664...7,803,662
Ensembl chrNW_004955478:7,751,830...7,799,460
JBrowse link
G Habp4 hyaluronan binding protein 4 ISO (PMID:19523114) UniProtKB PMID:19523114 NCBI chrNW_004955422:23,449,175...23,475,919
Ensembl chrNW_004955422:23,450,251...23,475,984
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22684629 RGD:10002775 NCBI chrNW_004955432:3,246,090...3,257,774 JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L like ISO (PMID:18669861) UniProtKB PMID:18669861 NCBI chrNW_004955441:6,229,692...6,269,051
Ensembl chrNW_004955441:6,229,692...6,257,214
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ISO RGD PMID:11118435 RGD:632715 NCBI chrNW_004955461:9,751,057...9,926,211
Ensembl chrNW_004955461:9,751,057...9,915,943
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO (PMID:20348923) UniProtKB PMID:20348923 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820
JBrowse link
G Polr2a RNA polymerase II subunit A ISO (PMID:21536736) UniProtKB PMID:21536736 NCBI chrNW_004955467:9,423,540...9,447,530
Ensembl chrNW_004955467:9,421,256...9,447,530
JBrowse link
G Rbm20 RNA binding motif protein 20 ISO PMID:22466703
(MGI:MGI:5442495|PMID:22466703)
(PMID:22466703)
UniProt
UniProtKB
PMID:22466703 MGI:MGI:5442495, RGD:7241566 NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO (PMID:22246180) UniProtKB PMID:22246180 NCBI chrNW_004955415:3,895,272...3,905,801 JBrowse link
G Setx senataxin ISO (PMID:19515850) UniProtKB PMID:19515850 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
G Slc38a2 solute carrier family 38 member 2 ISO (PMID:22215663) ARUK-UCL PMID:22215663 NCBI chrNW_004955500:5,517,323...5,530,055
Ensembl chrNW_004955500:5,516,039...5,531,758
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO RGD PMID:16308321 RGD:11038784 NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:9199345 RGD:11039429 NCBI chrNW_004955466:612,221...617,087
Ensembl chrNW_004955466:612,221...617,753
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:21536736) UniProtKB PMID:21536736 NCBI chrNW_004955567:683,472...699,105
Ensembl chrNW_004955567:683,078...697,996
JBrowse link
G Zpr1 ZPR1 zinc finger ISO (PMID:11283611) UniProtKB PMID:11283611 NCBI chrNW_004955412:18,117,957...18,127,552
Ensembl chrNW_004955412:18,116,531...18,127,552
JBrowse link
positive regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ISO (PMID:25851604) UniProtKB PMID:25851604 NCBI chrNW_004955456:14,047,409...14,057,483
Ensembl chrNW_004955456:14,047,409...14,057,939
JBrowse link
G Dimt1 DIMT1 rRNA methyltransferase and ribosome maturation factor ISO (PMID:25851604) UniProtKB PMID:25851604 NCBI chrNW_004955446:6,235,004...6,244,422
Ensembl chrNW_004955446:6,234,846...6,244,422
JBrowse link
G Heatr1 HEAT repeat containing 1 ISO (PMID:17699751) UniProtKB PMID:17699751 NCBI chrNW_004955492:3,627,889...3,672,269
Ensembl chrNW_004955492:3,627,889...3,672,269
JBrowse link
G Riok1 RIO kinase 1 ISO (PMID:22072790) UniProtKB PMID:22072790 NCBI chrNW_004955465:6,487,078...6,506,108
Ensembl chrNW_004955465:6,487,078...6,506,108
JBrowse link
G Riok2 RIO kinase 2 ISO (PMID:19564402) UniProtKB PMID:19564402 NCBI chrNW_004955418:15,487,248...15,509,490
Ensembl chrNW_004955418:15,487,248...15,513,831
JBrowse link
G Sirt7 sirtuin 7 ISO (PMID:26867678) UniProt PMID:26867678 NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728
JBrowse link
G Trmt112 tRNA methyltransferase subunit 11-2 ISO (PMID:25851604) UniProtKB PMID:25851604 NCBI chrNW_004955422:20,767,599...20,768,505
Ensembl chrNW_004955422:20,767,599...20,768,505
JBrowse link
G Utp15 UTP15 small subunit processome component ISO (PMID:17699751) UniProtKB PMID:17699751 NCBI chrNW_004955425:27,018,938...27,035,715
Ensembl chrNW_004955425:27,017,817...27,035,431
JBrowse link
G Wdr43 WD repeat domain 43 ISO (PMID:17699751) UniProtKB PMID:17699751 NCBI chrNW_004955469:10,777,332...10,835,577
Ensembl chrNW_004955469:10,777,292...10,835,577
JBrowse link
G Wdr75 WD repeat domain 75 ISO (PMID:17699751) UniProtKB PMID:17699751 NCBI chrNW_004955403:9,352,615...9,383,206
Ensembl chrNW_004955403:9,352,615...9,383,206
JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly(ADP-ribose) polymerase 1 ISO (PMID:28002403)
(MGI:MGI:5902647|PMID:28002403)
UniProtKB PMID:28002403 MGI:MGI:5902647 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO (PMID:28002403)
(MGI:MGI:5902647|PMID:28002403)
UniProtKB PMID:28002403 MGI:MGI:5902647 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839
JBrowse link
positive regulation of snRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Larp7 La ribonucleoprotein 7, transcriptional regulator ISO (PMID:28254838) UniProt PMID:28254838 NCBI chrNW_004955457:14,178,674...14,200,164
Ensembl chrNW_004955457:14,178,947...14,192,193
JBrowse link
G Mepce methylphosphate capping enzyme ISO (PMID:28254838) UniProt PMID:28254838 NCBI chrNW_004955573:526,083...531,222
Ensembl chrNW_004955573:526,613...530,286
JBrowse link
G Myod1 myogenic differentiation 1 ISO (MGI:MGI:6148658|PMID:25217815) UniProtKB PMID:25217815 MGI:MGI:6148658 NCBI chrNW_004955414:32,523,959...32,526,575
Ensembl chrNW_004955414:32,523,924...32,526,674
JBrowse link
G Znf143 zinc finger protein 143 ISO (PMID:9009278) GO_Central PMID:9009278 NCBI chrNW_004955414:25,220,574...25,252,962
Ensembl chrNW_004955414:25,221,440...25,255,175
JBrowse link
positive regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spring1 SREBF pathway regulator in golgi 1 ISO (PMID:32111832)
(MGI:MGI:6401656|PMID:32111832)
UniProt PMID:32111832 MGI:MGI:6401656 NCBI chrNW_004955455:14,331,512...14,349,252
Ensembl chrNW_004955455:14,331,399...14,349,475
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B ISO (MGI:MGI:6120228|PMID:29420538) UniProtKB PMID:29420538 MGI:MGI:6120228 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003
JBrowse link
positive regulation of sterol regulatory element binding protein cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5927299|PMID:28846071) UniProt PMID:28846071 MGI:MGI:5927299 NCBI chrNW_004955413:4,571,028...4,605,097
Ensembl chrNW_004955413:4,571,028...4,605,097
JBrowse link
positive regulation of strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wrn WRN RecQ like helicase ISO (PMID:26420422) BHF-UCL PMID:26420422 NCBI chrNW_004955463:7,495,243...7,633,532
Ensembl chrNW_004955463:7,525,100...7,633,596
JBrowse link
positive regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (MGI:MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:MGI:5645200 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582
JBrowse link
G Slx1a SLX1 homolog A, structure-specific endonuclease subunit ISO (MGI:MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:MGI:5645200 NCBI chrNW_004955493:6,797,913...6,800,555 JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit ISO (MGI:MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:MGI:5645200 NCBI chrNW_004955442:13,765,660...13,792,106
Ensembl chrNW_004955442:13,770,340...13,791,314
JBrowse link
positive regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor ISO (PMID:17237768) BHF-UCL PMID:17237768 NCBI chrNW_004955484:9,022,520...9,025,446
Ensembl chrNW_004955484:9,022,520...9,025,446
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955405:9,892,089...9,904,407
Ensembl chrNW_004955405:9,892,116...9,904,407
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955424:22,088,949...22,108,514
Ensembl chrNW_004955424:22,088,949...22,108,514
JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:MGI:5428344 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO (PMID:25467444)
(MGI:MGI:3047190|PMID:15240872)
BHF-UCL
MGI
PMID:15240872, PMID:25467444 MGI:MGI:3047190 NCBI chrNW_004955594:846,997...857,255
Ensembl chrNW_004955594:847,815...856,510
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:16545136) BHF-UCL PMID:16545136 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G Grhl2 grainyhead like transcription factor 2 ISO (PMID:19015635), (PMID:20938050) UniProtKB PMID:19015635, PMID:20938050 NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
JBrowse link
G Hmbox1 homeobox containing 1 ISO (PMID:23685356) BHF-UCL PMID:23685356 NCBI chrNW_004955403:51,199,547...51,377,249 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:10197982) BHF-UCL PMID:10197982 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:10197982) BHF-UCL PMID:10197982 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Klf4 Kruppel like factor 4 ISO (PMID:20629177) BHF-UCL PMID:20629177 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955439:20,144,059...20,263,885
Ensembl chrNW_004955439:20,144,059...20,263,879
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955454:2,413,393...2,420,703
Ensembl chrNW_004955454:2,413,822...2,419,276
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955482:8,409,192...8,434,907 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:5810267|PMID:9637678) BHF-UCL PMID:9637678 MGI:MGI:5810267 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004955403:41,804,273...41,840,232
Ensembl chrNW_004955403:41,804,451...41,839,486
JBrowse link
G Nek2 NIMA related kinase 2 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:5,553,661...5,563,648
Ensembl chrNW_004955406:5,553,819...5,566,361
JBrowse link
G Nek7 NIMA related kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:34,575,292...34,714,024
Ensembl chrNW_004955406:34,626,494...34,717,546
JBrowse link
G Nvl nuclear VCP like ISO (PMID:22226966) UniProtKB PMID:22226966 NCBI chrNW_004955520:1,010,966...1,069,176
Ensembl chrNW_004955520:1,011,621...1,062,286
JBrowse link
G Parm1 prostate androgen-regulated mucin-like protein 1 ISO PMID:12772192 UniProt PMID:12772192 RGD:8553456 NCBI chrNW_004955474:1,065,758...1,144,460
Ensembl chrNW_004955474:1,067,230...1,141,056
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878) BHF-UCL PMID:26482878 NCBI chrNW_004955442:4,255,726...4,421,083
Ensembl chrNW_004955442:4,258,692...4,422,197
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955436:4,433,065...4,600,967
Ensembl chrNW_004955436:4,568,118...4,600,311
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955559:1,064,924...1,070,120 JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:15181449)
(PMID:16043710), (PMID:17237768)
BHF-UCL PMID:15181449, PMID:16043710, PMID:17237768 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031
JBrowse link
G Prkcq protein kinase C theta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO (PMID:19740745)
(MGI:MGI:5819359|PMID:10197982)
(PMID:10197982), (PMID:19740745)
BHF-UCL PMID:10197982, PMID:19740745 MGI:MGI:5819359 NCBI chrNW_004955458:4,203,075...4,209,967
Ensembl chrNW_004955458:4,203,076...4,209,910
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955439:21,114,038...21,124,379 JBrowse link
G Tnks tankyrase ISO (PMID:12782650) BHF-UCL PMID:12782650 NCBI chrNW_004955463:5,589,194...5,770,141
Ensembl chrNW_004955463:5,588,423...5,764,581
JBrowse link
G Wrap53 WD repeat containing antisense to TP53 ISO (MGI:MGI:6189679|PMID:29804836)
(PMID:19179534), (PMID:23685356), (PMID:29804836)
(PMID:23685356), (PMID:25467444)
UniProtKB
BHF-UCL
PMID:19179534, PMID:23685356, PMID:25467444, PMID:29804836 MGI:MGI:6189679 NCBI chrNW_004955467:9,225,506...9,240,756 JBrowse link
positive regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO (MGI:MGI:5438900|PMID:22633954) BHF-UCL PMID:22633954 MGI:MGI:5438900 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955439:20,144,059...20,263,885
Ensembl chrNW_004955439:20,144,059...20,263,879
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955454:2,413,393...2,420,703
Ensembl chrNW_004955454:2,413,822...2,419,276
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955482:8,409,192...8,434,907 JBrowse link
G Nabp2 nucleic acid binding protein 2 ISO (PMID:25589350)
(MGI:MGI:5629774|PMID:25589350)
BHF-UCL PMID:25589350 MGI:MGI:5629774 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634
JBrowse link
G Nek2 NIMA related kinase 2 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:5,553,661...5,563,648
Ensembl chrNW_004955406:5,553,819...5,566,361
JBrowse link
G Nek7 NIMA related kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:34,575,292...34,714,024
Ensembl chrNW_004955406:34,626,494...34,717,546
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955436:4,433,065...4,600,967
Ensembl chrNW_004955436:4,568,118...4,600,311
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955559:1,064,924...1,070,120 JBrowse link
G Prkcq protein kinase C theta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chrNW_004955528:531,680...578,003 JBrowse link
G Tnks tankyrase ISO (PMID:25939383)
(PMID:21531765)
BHF-UCL PMID:21531765, PMID:25939383 NCBI chrNW_004955463:5,589,194...5,770,141
Ensembl chrNW_004955463:5,588,423...5,764,581
JBrowse link
G Tnks2 tankyrase 2 ISO (PMID:21531765)
(PMID:25939383)
BHF-UCL PMID:21531765, PMID:25939383 NCBI chrNW_004955425:1,419,013...1,492,267
Ensembl chrNW_004955425:1,417,679...1,492,267
JBrowse link
positive regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler ISO (MGI:MGI:4454526|PMID:20110566) UniProtKB PMID:20110566 MGI:MGI:4454526 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (PMID:22238380) UniProtKB PMID:22238380 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Gnl3 G protein nucleolar 3 ISO (PMID:22641345) BHF-UCL PMID:22641345 NCBI chrNW_004955430:2,675,477...2,678,113 JBrowse link
G Nbn nibrin ISO (PMID:16374507) BHF-UCL PMID:16374507 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:22641345), (PMID:26119943) BHF-UCL PMID:22641345, PMID:26119943 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 ISO (PMID:23426265) BHF-UCL PMID:23426265 NCBI chrNW_004955583:621,380...635,595
Ensembl chrNW_004955583:621,092...634,929
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO (PMID:16374507) BHF-UCL PMID:16374507 NCBI chrNW_004955408:3,953,801...4,035,494 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 ISO (MGI:MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:MGI:5645200 NCBI chrNW_004955528:531,680...578,003 JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:23201774), (PMID:25819580) BHF-UCL PMID:23201774, PMID:25819580 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (MGI:MGI:3615734|PMID:15968270) MGI PMID:15968270 MGI:MGI:3615734 NCBI chrNW_004955484:7,318,813...7,344,221
Ensembl chrNW_004955484:7,318,860...7,347,430
JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor ISO (PMID:17237768) BHF-UCL PMID:17237768 NCBI chrNW_004955484:9,022,520...9,025,446
Ensembl chrNW_004955484:9,022,520...9,025,446
JBrowse link
G Atm ATM serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:MGI:5705431 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Atr ATR serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:MGI:5705431 NCBI chrNW_004955508:3,337,036...3,440,313
Ensembl chrNW_004955508:3,337,432...3,440,257
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955405:9,892,089...9,904,407
Ensembl chrNW_004955405:9,892,116...9,904,407
JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955545:2,444,988...2,460,976 JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955424:22,088,949...22,108,514
Ensembl chrNW_004955424:22,088,949...22,108,514
JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955426:132,106...144,251
Ensembl chrNW_004955426:131,871...144,354
JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955456:8,223,785...8,236,760
Ensembl chrNW_004955456:8,223,774...8,237,966
JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955424:12,379,222...12,402,161 JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955407:28,414,583...28,427,964
Ensembl chrNW_004955407:28,414,583...28,428,215
JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:MGI:5428344 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO (MGI:MGI:3047190|PMID:15240872) MGI PMID:15240872 MGI:MGI:3047190 NCBI chrNW_004955594:846,997...857,255
Ensembl chrNW_004955594:847,815...856,510
JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:16275645) BHF-UCL PMID:16275645 NCBI chrNW_004955426:26,046,742...26,066,747
Ensembl chrNW_004955426:26,046,742...26,063,388
JBrowse link
G Hmbox1 homeobox containing 1 ISO (PMID:23685356) BHF-UCL PMID:23685356 NCBI chrNW_004955403:51,199,547...51,377,249 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955439:20,144,059...20,263,885
Ensembl chrNW_004955439:20,144,059...20,263,879
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955454:2,413,393...2,420,703
Ensembl chrNW_004955454:2,413,822...2,419,276
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955482:8,409,192...8,434,907 JBrowse link
G Nek2 NIMA related kinase 2 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:5,553,661...5,563,648
Ensembl chrNW_004955406:5,553,819...5,566,361
JBrowse link
G Nek7 NIMA related kinase 7 ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955406:34,575,292...34,714,024
Ensembl chrNW_004955406:34,626,494...34,717,546
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) BHF-UCL PMID:26482878, PMID:26950371 NCBI chrNW_004955442:4,255,726...4,421,083
Ensembl chrNW_004955442:4,258,692...4,422,197
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955436:4,433,065...4,600,967
Ensembl chrNW_004955436:4,568,118...4,600,311
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955559:1,064,924...1,070,120 JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:12768206), (PMID:12781132)
(PMID:17237768)
BHF-UCL PMID:12768206, PMID:12781132, PMID:17237768 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031
JBrowse link
G Prkcq protein kinase C theta ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004955439:21,114,038...21,124,379 JBrowse link
G Tnks tankyrase ISO (PMID:11739745)
(PMID:12782650), (PMID:18221737)
BHF-UCL PMID:11739745, PMID:12782650, PMID:18221737 NCBI chrNW_004955463:5,589,194...5,770,141
Ensembl chrNW_004955463:5,588,423...5,764,581
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO (PMID:19188702) BHF-UCL PMID:19188702 NCBI chrNW_004955453:16,967,453...17,054,634
Ensembl chrNW_004955453:16,967,453...17,054,634
JBrowse link
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:17694070), (PMID:26586427) BHF-UCL PMID:17694070, PMID:26586427 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (PMID:21149580) UniProt PMID:21149580 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004955410:28,032,193...28,042,459 JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004955403:41,804,273...41,840,232
Ensembl chrNW_004955403:41,804,451...41,839,486
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chrNW_004955528:531,680...578,003 JBrowse link
positive regulation of telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 ISO (MGI:MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:MGI:5645200 NCBI chrNW_004955528:531,680...578,003 JBrowse link
positive regulation of telomeric RNA transcription from RNA pol II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler ISO (PMID:26055325) BHF-UCL PMID:26055325 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724
JBrowse link
positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setx senataxin ISO (PMID:21700224) UniProtKB PMID:21700224 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
positive regulation of transcription by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 ISO (PMID:22915762) ParkinsonsUK-UCL PMID:22915762 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Bnc1 basonuclin 1 ISO (PMID:11152639) ARUK-UCL PMID:11152639 NCBI chrNW_004955416:13,428,760...13,440,837
Ensembl chrNW_004955416:13,428,760...13,440,921
JBrowse link
G Dhx33 DEAH-box helicase 33 ISO (MGI:MGI:5300123|PMID:21930779)
(PMID:21930779)
UniProtKB PMID:21930779 MGI:MGI:5300123 NCBI chrNW_004955467:10,797,464...10,819,083
Ensembl chrNW_004955467:10,793,934...10,818,898
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO (PMID:22915762)
(MGI:MGI:5607215|PMID:22915762)
ParkinsonsUK-UCL PMID:22915762 MGI:MGI:5607215 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO (PMID:21555369) UniProtKB PMID:21555369 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379
JBrowse link
G Heatr1 HEAT repeat containing 1 ISO (PMID:17699751) UniProtKB PMID:17699751 NCBI chrNW_004955492:3,627,889...3,672,269
Ensembl chrNW_004955492:3,627,889...3,672,269
JBrowse link
G Lyar Ly1 antibody reactive ISO (PMID:31504794) ARUK-UCL PMID:31504794 NCBI chrNW_004955514:5,358,843...5,375,990
Ensembl chrNW_004955514:5,358,843...5,376,112
JBrowse link
G Phf8 PHD finger protein 8 ISO (PMID:20208542) UniProtKB PMID:20208542 NCBI chrNW_004955475:1,105,619...1,230,758
Ensembl chrNW_004955475:1,105,619...1,230,756
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO (MGI:MGI:5751679|PMID:14635196) ParkinsonsUK-UCL PMID:14635196