Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:carbon catabolite regulation of transcription
go back to main search page
Accession:GO:0045990 term browser browse the term
Definition:A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.
Synonyms:exact_synonym: regulation of transcription by carbon catabolites


show annotations for term's descendants       view all columns           Sort by:
 
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
positive regulation of transcription by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:5131625
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ncoa1 nuclear receptor coactivator 1 JBrowse link 6 28,677,563 28,931,844 RGD:1624291
RGD:1600115
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
G Usf1 upstream transcription factor 1 JBrowse link 13 89,797,750 89,805,561 RGD:1624291
RGD:1600115
G Usf2 upstream transcription factor 2, c-fos interacting JBrowse link 1 89,371,798 89,383,005 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    response to stimulus 10340
      response to chemical 6280
        response to nutrient 373
          cellular response to nutrient 97
            carbon catabolite regulation of transcription 5
              carbon catabolite activation of transcription + 5
              carbon catabolite regulation of transcription from RNA polymerase II promoter + 4
              carbon catabolite repression of transcription + 0
Path 2
Term Annotations click to browse term
  biological_process 19245
    metabolic process 11438
      cellular metabolic process 10461
        cellular aromatic compound metabolic process 5385
          nucleobase-containing compound metabolic process 5163
            nucleic acid metabolic process 4679
              RNA metabolic process 4191
                RNA biosynthetic process 3276
                  nucleic acid-templated transcription 3264
                    transcription, DNA-templated 3217
                      regulation of transcription, DNA-templated 3104
                        carbon catabolite regulation of transcription 5
                          carbon catabolite activation of transcription + 5
                          carbon catabolite regulation of transcription from RNA polymerase II promoter + 4
                          carbon catabolite repression of transcription + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.