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ONTOLOGY REPORT - ANNOTATIONS


Term:carbon catabolite activation of transcription
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Accession:GO:0045991 term browser browse the term
Definition:A transcription regulation process in which the presence of one carbon source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.
Synonyms:exact_synonym: positive regulation of transcription by carbon catabolites


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positive regulation of transcription by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor IMP RGD PMID:20655308 RGD:5131625 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 ISO (PMID:10207113)
(MGI:MGI:5297786|PMID:16723356)
RGD PMID:10207113, PMID:16723356 MGI:MGI:5297786 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:MGI:5142372 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Usf1 upstream transcription factor 1 ISO (PMID:7852331)
(MGI:MGI:1330677|PMID:9890958)
RGD PMID:7852331, PMID:9890958 MGI:MGI:1330677 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting ISO
IEA
(PMID:7852331)
GO_REF:0000107
(MGI:MGI:1330677|PMID:9890958)
RGD
Ensembl
PMID:7852331, PMID:9890958 GO_REF:0000107, MGI:MGI:1330677 NCBI chr 1:89,371,798...89,383,005
Ensembl chr 1:89,371,794...89,382,463
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      positive regulation of metabolic process 4083
        positive regulation of macromolecule metabolic process 3765
          positive regulation of gene expression 2524
            positive regulation of transcription, DNA-templated 1698
              carbon catabolite activation of transcription 5
                carbon catabolite activation of transcription from RNA polymerase II promoter + 4
                positive regulation of transcription by galactose + 1
                positive regulation of transcription by glucose + 4
                positive regulation of transcription by oleic acid + 0
Path 2
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      cellular metabolic process 11064
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                RNA biosynthetic process 3478
                  regulation of RNA biosynthetic process 3343
                    regulation of nucleic acid-templated transcription 3338
                      positive regulation of nucleic acid-templated transcription 1758
                        positive regulation of transcription, DNA-templated 1698
                          carbon catabolite activation of transcription 5
                            carbon catabolite activation of transcription from RNA polymerase II promoter + 4
                            positive regulation of transcription by galactose + 1
                            positive regulation of transcription by glucose + 4
                            positive regulation of transcription by oleic acid + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.