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ONTOLOGY REPORT - ANNOTATIONS


Term:polyol biosynthetic process
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Accession:GO:0046173 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol biosynthetic process;   polyol anabolism;   polyol biosynthesis;   polyol formation;   polyol synthesis


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calcitriol biosynthetic process from calciol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 JBrowse link 9 81,968,285 81,998,213 RGD:1600115
RGD:1624291
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:1624291
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 JBrowse link 1 184,060,521 184,106,604 RGD:1624291
diol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:11252156
glycerol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:8553472
RGD:1624291
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:5128556
G Pgp phosphoglycolate phosphatase JBrowse link 10 13,836,105 13,838,731 RGD:10679995
RGD:13792537
RGD:1624291
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:8553288
RGD:13792537
RGD:1624291
inositol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impa1 inositol monophosphatase 1 JBrowse link 2 93,675,203 93,696,355 RGD:1600115
G Impa2 inositol monophosphatase 2 JBrowse link 18 63,016,577 63,050,123 RGD:1600115
G Isyna1 inositol-3-phosphate synthase 1 JBrowse link 16 20,589,497 20,592,333 RGD:1600115
RGD:13792537
inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:1624291
G Ip6k1 inositol hexakisphosphate kinase 1 JBrowse link 8 116,781,957 116,826,152 RGD:1600115
G Ip6k2 inositol hexakisphosphate kinase 2 JBrowse link 8 117,574,136 117,599,849 RGD:1600115
G Ip6k3 inositol hexakisphosphate kinase 3 JBrowse link 20 5,733,485 5,754,859 RGD:1624291
G Ipmk inositol polyphosphate multikinase JBrowse link 20 18,457,309 18,489,884 RGD:1624291
G Ippk inositol-pentakisphosphate 2-kinase JBrowse link 17 15,604,148 15,643,312 RGD:13792537
G Itpka inositol-trisphosphate 3-kinase A JBrowse link 3 111,545,007 111,553,605 RGD:1600115
G Itpkb inositol-trisphosphate 3-kinase B JBrowse link 13 98,615,287 98,710,426 RGD:1600115
G Itpkc inositol-trisphosphate 3-kinase C JBrowse link 1 84,018,857 84,040,433 RGD:1600115
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 JBrowse link 3 113,272,850 113,316,324 RGD:13792537
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 JBrowse link 9 111,232,967 111,249,613 RGD:13792537
inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plcb1 phospholipase C beta 1 JBrowse link 3 127,721,244 128,419,565 RGD:13792537
G Plcb2 phospholipase C, beta 2 JBrowse link 3 110,497,760 110,517,563 RGD:13792537
G Plcb3 phospholipase C beta 3 JBrowse link 1 222,207,887 222,224,993 RGD:13792537
G Plcb4 phospholipase C, beta 4 JBrowse link 3 128,601,163 128,971,720 RGD:13792537
G Plcd1 phospholipase C, delta 1 JBrowse link 8 127,753,514 127,782,070 RGD:13792537
G Plcd3 phospholipase C, delta 3 JBrowse link 10 91,164,778 91,186,067 RGD:13792537
G Plcd4 phospholipase C, delta 4 JBrowse link 9 81,816,395 81,844,364 RGD:13792537
G Plce1 phospholipase C, epsilon 1 JBrowse link 1 257,156,023 257,465,440 RGD:13792537
G Plcg1 phospholipase C, gamma 1 JBrowse link 3 156,727,642 156,758,307 RGD:2299886
RGD:13792537
G Plcg2 phospholipase C, gamma 2 JBrowse link 19 50,039,410 50,173,543 RGD:1624291
RGD:13792537
RGD:1600115
G Plch1 phospholipase C, eta 1 JBrowse link 2 154,256,382 154,468,166 RGD:13792537
G Plch2 phospholipase C, eta 2 JBrowse link 5 172,386,400 172,455,965 RGD:13792537
G Plcl1 phospholipase C-like 1 JBrowse link 9 62,016,112 62,349,244 RGD:13792537
G Plcl2 phospholipase C-like 2 JBrowse link 9 1,782,536 1,984,654 RGD:13792537
G Plcz1 phospholipase C, zeta 1 JBrowse link 4 174,125,072 174,181,524 RGD:13792537
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:1624291
G Scp2 sterol carrier protein 2 JBrowse link 5 127,647,934 127,735,703 RGD:1624291
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
G Prkg1 protein kinase cGMP-dependent 1 JBrowse link 1 248,982,039 250,300,952 RGD:7777104
phytosphingosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acer3 alkaline ceramidase 3 JBrowse link 1 163,160,987 163,263,621 RGD:1624291
RGD:13792537
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcyap1r1 ADCYAP receptor type I JBrowse link 4 85,662,809 85,711,696 RGD:2315982
G Avpr1b arginine vasopressin receptor 1B JBrowse link 13 48,367,307 48,378,831 RGD:1624291
G Cd244 CD244 molecule JBrowse link 13 89,959,091 89,995,993 RGD:1624291
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor JBrowse link 1 48,076,761 48,108,218 RGD:2316794
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743897
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:9999203
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
G Pth1r parathyroid hormone 1 receptor JBrowse link 8 118,984,531 119,012,803 RGD:8553376
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 12 17,309,122 17,315,267 RGD:1600115
RGD:1624291
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:1624291
RGD:1600115
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:6902910
G P2ry1 purinergic receptor P2Y1 JBrowse link 2 151,314,818 151,320,312 RGD:8553380
G P2ry6 pyrimidinergic receptor P2Y6 JBrowse link 1 165,972,439 166,008,348 RGD:1624291
G Plcd1 phospholipase C, delta 1 JBrowse link 8 127,753,514 127,782,070 RGD:2300424
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:1624291
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115
sorbitol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:1626096
RGD:8548687
sphinganine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 JBrowse link 17 11,856,525 11,895,566 RGD:1624291
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:1624291
sphingosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
RGD:1600115
G Acer1 alkaline ceramidase 1 JBrowse link 9 10,061,978 10,093,588 RGD:1624291
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:1624291
G Acer3 alkaline ceramidase 3 JBrowse link 1 163,160,987 163,263,621 RGD:1624291
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:1600115
RGD:1624291
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:13838800
RGD:13792537
RGD:1624291
RGD:13838794
RGD:13838793
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1624291
RGD:1600115
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 JBrowse link 17 11,856,525 11,895,566 RGD:1624291
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:1624291
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1624291
G Gch1 GTP cyclohydrolase 1 JBrowse link 15 23,935,011 23,968,971 RGD:625450
RGD:13792537
RGD:1624291
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 JBrowse link 20 30,689,690 30,696,465 RGD:1600115
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 JBrowse link 17 8,929,675 8,980,712 RGD:1600115
G Pts 6-pyruvoyl-tetrahydropterin synthase JBrowse link 8 54,954,261 54,961,271 RGD:68294
RGD:1600115
RGD:1624291
G Qdpr quinoid dihydropteridine reductase JBrowse link 14 70,164,682 70,178,284 RGD:729701
RGD:13792537
RGD:8553309
RGD:5128582
RGD:4139903
G RGD1560795 similar to Sepiapterin reductase (SPR) JBrowse link 4 116,933,277 116,936,466 RGD:13792537
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:70022
RGD:13792537
RGD:1600056

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      small molecule metabolic process 1788
        alcohol metabolic process 354
          polyol metabolic process 129
            polyol biosynthetic process 76
              1,5-anhydro-D-fructose biosynthetic process 0
              2-deoxystreptamine biosynthetic process 0
              alditol biosynthetic process + 5
              butirosin biosynthetic process 0
              calcitriol biosynthetic process from calciol 3
              diol biosynthetic process + 20
              gentamycin biosynthetic process 0
              inositol biosynthetic process + 3
              inositol phosphate biosynthetic process + 45
              kanamycin biosynthetic process 0
              neomycin biosynthetic process 0
              paromomycin biosynthetic process 0
              phenolic phthiocerol biosynthetic process 0
              phytosphingosine biosynthetic process 1
              streptomycin biosynthetic process 0
              tobramycin biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      organic substance metabolic process 11027
        organic substance biosynthetic process 5871
          organic hydroxy compound biosynthetic process 238
            alcohol biosynthetic process 153
              polyol biosynthetic process 76
                1,5-anhydro-D-fructose biosynthetic process 0
                2-deoxystreptamine biosynthetic process 0
                alditol biosynthetic process + 5
                butirosin biosynthetic process 0
                calcitriol biosynthetic process from calciol 3
                diol biosynthetic process + 20
                gentamycin biosynthetic process 0
                inositol biosynthetic process + 3
                inositol phosphate biosynthetic process + 45
                kanamycin biosynthetic process 0
                neomycin biosynthetic process 0
                paromomycin biosynthetic process 0
                phenolic phthiocerol biosynthetic process 0
                phytosphingosine biosynthetic process 1
                streptomycin biosynthetic process 0
                tobramycin biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.