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ONTOLOGY REPORT - ANNOTATIONS


Term:polyol catabolic process
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Accession:GO:0046174 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol catabolic process;   polyol breakdown;   polyol catabolism;   polyol degradation


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diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT3 nudix hydrolase 3 IDA (PMID:10585413) UniProtKB PMID:10585413 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GK glycerol kinase IEA UniProtKB GO_REF:0000041 NCBI chr  X:30,653,348...30,731,462
Ensembl chr  X:30,653,359...30,731,456
JBrowse link
G GK2 glycerol kinase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 4:79,406,361...79,408,228
Ensembl chr 4:79,406,361...79,408,228
JBrowse link
G GK3P glycerol kinase 3 pseudogene IEA UniProt GO_REF:0000041 NCBI chr 4:165,277,792...165,280,023
Ensembl chr 4:165,277,812...165,279,679
JBrowse link
G GK5 glycerol kinase 5 IEA UniProtKB GO_REF:0000041 NCBI chr 3:142,157,527...142,225,592
Ensembl chr 3:142,157,527...142,225,592
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 2:156,435,290...156,586,403
Ensembl chr 2:156,435,290...156,613,735
JBrowse link
G TKFC triokinase and FMN cyclase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:61,333,228...61,353,426
Ensembl chr11:61,333,210...61,353,295
JBrowse link
G TPI1 triosephosphate isomerase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:6,866,834...6,870,948
Ensembl chr12:6,867,119...6,870,948
JBrowse link
inositol catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIOX myo-inositol oxygenase IDA
IEA
IBA
ISS
(PMID:18364358)
(PMID:21873635)
UniProtKB
UniProt
GO_Central
PMID:18364358, PMID:21873635 GO_REF:0000024, GO_REF:0000104 NCBI chr22:50,483,988...50,490,648
Ensembl chr22:50,486,784...50,490,648
JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTSR1 neurotensin receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr20:62,708,770...62,762,771
Ensembl chr20:62,708,836...62,762,771
JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 IEA InterPro GO_REF:0000002 NCBI chr 1:220,057,482...220,089,916
Ensembl chr 1:220,057,482...220,090,462
JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 IEA InterPro GO_REF:0000002 NCBI chr 8:56,957,931...56,993,874
Ensembl chr 8:56,957,931...56,993,867
JBrowse link
G IMPA1 inositol monophosphatase 1 IDA
IEA
IBA
(PMID:17068342), (PMID:9462881)
(PMID:21873635)
MGI
InterPro
GO_Central
PMID:9462881, PMID:17068342, PMID:21873635 GO_REF:0000002 NCBI chr 8:81,656,914...81,686,325
Ensembl chr 8:81,656,914...81,686,331
JBrowse link
G IMPA2 inositol monophosphatase 2 IDA
IEA
IBA
(PMID:17068342)
(PMID:21873635)
MGI
InterPro
GO_Central
PMID:17068342, PMID:21873635 GO_REF:0000002 NCBI chr18:11,981,465...12,030,878
Ensembl chr18:11,981,025...12,030,877
JBrowse link
G INPP1 inositol polyphosphate-1-phosphatase IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 2:190,343,589...190,371,665
Ensembl chr 2:190,343,570...190,371,665
JBrowse link
G INPP4B inositol polyphosphate-4-phosphatase type II B IEA Ensembl GO_REF:0000107 NCBI chr 4:142,023,160...142,846,535
Ensembl chr 4:142,023,160...142,847,432
JBrowse link
G INPP5A inositol polyphosphate-5-phosphatase A IDA
IBA
(PMID:8006039)
(PMID:21873635)
MGI
GO_Central
PMID:8006039, PMID:21873635 NCBI chr10:132,537,784...132,783,480
Ensembl chr10:132,537,787...132,783,480
JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:37,860,697...37,947,095
Ensembl chr 1:37,860,697...37,947,057
JBrowse link
G INPP5E inositol polyphosphate-5-phosphatase E IEA Ensembl GO_REF:0000107 NCBI chr 9:136,428,619...136,439,861
Ensembl chr 9:136,428,619...136,439,845
JBrowse link
G INPP5J inositol polyphosphate-5-phosphatase J IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:31,107,736...31,134,697
Ensembl chr22:31,122,731...31,134,697
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K IDA
IBA
(PMID:12536145)
(PMID:21873635)
MGI
GO_Central
PMID:12536145, PMID:21873635 NCBI chr17:1,494,575...1,516,735
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G MTMR2 myotubularin related protein 2 ISO (MGI:3619505|PMID:16399794) MGI PMID:16399794 MGI:3619505 NCBI chr11:95,832,880...95,924,110
Ensembl chr11:95,821,766...95,925,315
Ensembl chr11:95,821,766...95,925,315
Ensembl chr11:95,821,766...95,925,315
JBrowse link
G MTMR7 myotubularin related protein 7 ISO (MGI:2673068|PMID:12890864) MGI PMID:12890864 MGI:2673068 NCBI chr 8:17,296,128...17,413,353
Ensembl chr 8:17,296,794...17,413,528
JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:129,540,259...129,592,556
Ensembl chr  X:129,539,849...129,592,561
JBrowse link
G PTEN phosphatase and tensin homolog IDA (PMID:9593664) UniProtKB PMID:9593664 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G SYNJ1 synaptojanin 1 ISS
IBA
(PMID:21873635) ParkinsonsUK-UCL
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr21:32,628,759...32,731,247
Ensembl chr21:32,628,759...32,728,048
Ensembl chr21:32,628,759...32,728,048
JBrowse link
G SYNJ2 synaptojanin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:157,981,856...158,099,176
Ensembl chr 6:157,981,863...158,099,176
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase IDA (PMID:8487505) UniProtKB PMID:8487505 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,181...45,077,185
Ensembl chr15:45,023,181...45,077,185
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase IDA
IMP
IBA
(PMID:12962626), (PMID:3365415), (PMID:6870831), (PMID:8487505)
(PMID:32367058)
(PMID:21873635)
UniProtKB
FlyBase
GO_Central
PMID:3365415, PMID:6870831, PMID:8487505, PMID:12962626, PMID:21873635, PMID:32367058 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,181...45,077,185
Ensembl chr15:45,023,181...45,077,185
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18673
    metabolic process 12182
      small molecule metabolic process 2032
        alcohol metabolic process 404
          polyol metabolic process 144
            polyol catabolic process 28
              1,5-anhydro-D-fructose catabolic process 0
              2-deoxystreptamine catabolic process 0
              alditol catabolic process + 8
              butirosin catabolic process 0
              diol catabolic process + 0
              gentamycin catabolic process 0
              inositol catabolic process 1
              inositol phosphate catabolic process + 19
              kanamycin catabolic process 0
              neomycin catabolic process 0
              paromomycin catabolic process 0
              tobramycin catabolic process 0
              triethanolamine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 18673
    metabolic process 12182
      organic substance metabolic process 11603
        organic substance catabolic process 2371
          organic hydroxy compound catabolic process 83
            alcohol catabolic process 60
              polyol catabolic process 28
                1,5-anhydro-D-fructose catabolic process 0
                2-deoxystreptamine catabolic process 0
                alditol catabolic process + 8
                butirosin catabolic process 0
                diol catabolic process + 0
                gentamycin catabolic process 0
                inositol catabolic process 1
                inositol phosphate catabolic process + 19
                kanamycin catabolic process 0
                neomycin catabolic process 0
                paromomycin catabolic process 0
                tobramycin catabolic process 0
                triethanolamine catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.