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ONTOLOGY REPORT - ANNOTATIONS


Term:short-chain fatty acid metabolic process
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Accession:GO:0046459 term browser browse the term
Definition:The chemical reactions and pathways involving fatty acids with a chain length of less than C6.
Synonyms:exact_synonym: short-chain fatty acid metabolism


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short-chain fatty acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot4 acyl-CoA thioesterase 4 JBrowse link 6 107,517,668 107,522,952 RGD:1624291
G Crat carnitine O-acetyltransferase JBrowse link 3 8,967,984 8,981,959 RGD:1600115
RGD:1624291
2-oxobutyrate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Thnsl2 threonine synthase-like 2 JBrowse link 4 98,976,559 98,997,187 RGD:1624291
RGD:13792537
2-oxobutyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link 17 77,287,580 77,304,482 RGD:727286
acetoacetic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
butyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acads acyl-CoA dehydrogenase short chain JBrowse link 12 47,254,503 47,263,747 RGD:2317678
RGD:13792537
butyrate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot4 acyl-CoA thioesterase 4 JBrowse link 6 107,517,668 107,522,952 RGD:1624291
propionate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acss1 acyl-CoA synthetase short-chain family member 1 JBrowse link 3 146,420,346 146,470,293 RGD:2317572
G Acss2 acyl-CoA synthetase short-chain family member 2 JBrowse link 3 151,032,925 151,075,856 RGD:2317572
propionate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:13792537
short-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial JBrowse link 15 10,462,380 10,466,496 RGD:1624291
short-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ces1d carboxylesterase 1D JBrowse link 19 15,195,514 15,239,827 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      cellular metabolic process 10737
        cellular lipid metabolic process 1025
          fatty acid metabolic process 408
            short-chain fatty acid metabolic process 11
              2-oxobutyrate metabolic process + 2
              acetoacetic acid metabolic process + 1
              butyrate metabolic process + 2
              glutamate catabolic process to 4-hydroxybutyrate 0
              propionate metabolic process + 3
              short-chain fatty acid biosynthetic process + 4
              short-chain fatty acid catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      cellular metabolic process 10737
        organic acid metabolic process 1053
          oxoacid metabolic process 1026
            carboxylic acid metabolic process 979
              monocarboxylic acid metabolic process 642
                fatty acid metabolic process 408
                  short-chain fatty acid metabolic process 11
                    2-oxobutyrate metabolic process + 2
                    acetoacetic acid metabolic process + 1
                    butyrate metabolic process + 2
                    glutamate catabolic process to 4-hydroxybutyrate 0
                    propionate metabolic process + 3
                    short-chain fatty acid biosynthetic process + 4
                    short-chain fatty acid catabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.