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ONTOLOGY REPORT - ANNOTATIONS


Term:viral budding
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Accession:GO:0046755 term browser browse the term
Definition:A viral process by which enveloped viruses acquire a host-derived membrane enriched in viral proteins to form their external envelope. The process starts when nucleocapsids, assembled or in the process of being built, induce formation of a membrane curvature in the host plasma or organelle membrane and wrap up in the forming bud. The process ends when the bud is eventually pinched off by membrane scission to release the enveloped particle into the lumenal or extracellular space.
Synonyms:narrow_synonym: virion budding
 related_synonym: viral capsid envelopment;   virus budding
 alt_id: GO:0046744
 xref: VZ:1947 "Viral budding"


show annotations for term's descendants           Sort by:
 
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B ISO (PMID:17701905) RGD PMID:17701905 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp5 charged multivesicular body protein 5 ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:11,970,401...12,009,463
Ensembl chr 3:11,972,813...12,007,570
JBrowse link
G Mvb12a multivesicular body subunit 12A ISO
IBA
(PMID:18005716)
PMID:21873635
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478
JBrowse link
G Mvb12b multivesicular body subunit 12B ISO
IBA
(PMID:18005716)
PMID:21873635
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:15126635) RGD PMID:15126635 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Tsg101 tumor susceptibility 101 ISO
ISS
(MGI:MGI:3850622|PMID:15256501)
(PMID:15126635), (PMID:18005716)
GO_REF:0000024
RGD
UniProt
PMID:15126635, PMID:15256501, PMID:18005716 GO_REF:0000024, MGI:MGI:3850622 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vta1 vesicle trafficking 1 ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185, PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959, PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:22978549) RGD PMID:22978549 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1b charged multivesicular body protein 1B ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:62,923,620...62,926,150 JBrowse link
G Chmp2a charged multivesicular body protein 2A ISO UniProtKB:Q9UQN3 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622, PMID:24107264, PMID:24878737 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B ISO UniProtKB:O43633 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622, PMID:24107264, PMID:24878737 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 ISO (PMID:16740483), (PMID:23051622), (PMID:24878737) RGD PMID:16740483, PMID:23051622, PMID:24878737 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264, PMID:24878737 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp6 charged multivesicular body protein 6 ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348
JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:44,472,364...44,483,723
Ensembl chr 9:44,472,365...44,560,837
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO UniProtKB:O75351 (PMID:24107264) RGD PMID:24107264 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    interspecies interaction between organisms 1917
      symbiotic process 400
        viral process 334
          viral budding 19
            viral budding from Golgi membrane 0
            viral budding from endoplasmic reticulum membrane 0
            viral budding from nuclear membrane + 0
            viral budding from plasma membrane 0
            viral budding via host ESCRT complex + 13
Path 2
Term Annotations click to browse term
  biological_process 20027
    interspecies interaction between organisms 1917
      symbiotic process 400
        viral process 334
          viral life cycle 251
            virion assembly 30
              viral budding 19
                viral budding from Golgi membrane 0
                viral budding from endoplasmic reticulum membrane 0
                viral budding from nuclear membrane + 0
                viral budding from plasma membrane 0
                viral budding via host ESCRT complex + 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.