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ONTOLOGY REPORT - ANNOTATIONS


Term:transport of virus
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Accession:GO:0046794 term browser browse the term
Definition:The directed movement of a virus, or part of a virus, into, out of, or within a host cell.
Synonyms:exact_synonym: viral transport
 narrow_synonym: virion transport


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clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 ISO
IBA
(PMID:12857889)
PMID:21873635
RGD PMID:12857889, PMID:21873635 RGD:13792537 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 ISO (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 ISO MGI:MGI:3856636 (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5437427|PMID:20686043), (MGI:MGI:5448513|PMID:21919738)
(PMID:19036818), (PMID:20686043), (PMID:20943977)
UniProt
RGD
PMID:19036818, PMID:20686043, PMID:20943977, PMID:21919738, PMID:22284121 GO_REF:0000024, MGI:MGI:5437405, MGI:MGI:5437427, MGI:MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Mx2 MX dynamin like GTPase 2 ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950
JBrowse link
G Trim15 tripartite motif containing 15 ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 ISO
IEA
UniProtKB:P51636 (PMID:21047970)
GO_REF:0000107
RGD
Ensembl
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cav2 caveolin 2 ISO
IEA
UniProtKB:O60840 (PMID:21047970)
GO_REF:0000107
RGD
Ensembl
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ctsl cathepsin L ISO (PMID:16081529), (PMID:32221306) RGD PMID:16081529, PMID:32221306 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G LOC100294508 dyslexia susceptibility 2-like ISO MGI:MGI:5907241|MGI:MGI:5907242 (MGI:MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:MGI:5750797 NCBI chr 5:144,779,306...144,872,271
Ensembl chr 5:144,779,681...144,872,271
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.