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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleocytoplasmic transport
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Accession:GO:0046824 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.
Synonyms:exact_synonym: up regulation of nucleocytoplasmic transport;   upregulation of nucleocytoplasmic transport
 narrow_synonym: activation of nucleocytoplasmic transport;   stimulation of nucleocytoplasmic transport


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positive regulation of nucleocytoplasmic transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:17218261) RGD PMID:17218261 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
positive regulation of protein export from nucleus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32b acidic nuclear phosphoprotein 32 family member B IEA
ISO
GO_REF:0000107
(PMID:17178712)
Ensembl
RGD
PMID:17178712 GO_REF:0000107 NCBI chr 5:62,070,709...62,094,633
Ensembl chr 5:62,071,346...62,094,633
JBrowse link
G Bag3 BAG cochaperone 3 ISO (PMID:26159920) RGD PMID:26159920 NCBI chr 1:199,941,258...199,965,191
Ensembl chr 1:199,941,161...199,965,191
JBrowse link
G Camk1 calcium/calmodulin-dependent protein kinase I ISO (PMID:23867755)
(MGI:4456961|PMID:11081517)
RGD PMID:11081517, PMID:23867755 MGI:4456961 NCBI chr 4:145,289,300...145,300,146
Ensembl chr 4:145,288,996...145,300,177
JBrowse link
G Camk4 calcium/calmodulin-dependent protein kinase IV ISO (MGI:4456961|PMID:11081517) RGD PMID:11081517 MGI:4456961 NCBI chr18:25,746,878...25,975,962
Ensembl chr18:25,749,098...25,965,957
JBrowse link
G Ctdspl2 CTD small phosphatase like 2 IEA
ISO
GO_REF:0000107
(MGI:5613417|PMID:25100727)
Ensembl
RGD
PMID:25100727 GO_REF:0000107, MGI:5613417 NCBI chr 3:113,906,803...113,957,289
Ensembl chr 3:113,918,629...113,960,101
JBrowse link
G Emd emerin ISO
IEA
(PMID:16858403)
GO_REF:0000107
RGD
Ensembl
PMID:16858403 GO_REF:0000107 NCBI chr  X:156,452,847...156,455,858
Ensembl chr  X:156,452,818...156,456,035
JBrowse link
G Gas6 growth arrest specific 6 ISO
ISS
(PMID:18680538)
GO_REF:0000024
RGD
UniProt
PMID:18680538 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO
IEA
(PMID:14744935)
GO_REF:0000107
RGD
Ensembl
PMID:14744935 GO_REF:0000107 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Mdm2 MDM2 proto-oncogene IMP p53 RGD PMID:17881359 RGD:2317374 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent, 1A IEA
ISO
GO_REF:0000107
(MGI:5613417|PMID:25100727)
Ensembl
RGD
PMID:25100727 GO_REF:0000107, MGI:5613417 NCBI chr 6:94,433,658...94,484,979
Ensembl chr 6:94,429,068...94,484,351
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha IEA
ISO
GO_REF:0000107
(MGI:3686547|PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107, MGI:3686547 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Ran RAN, member RAS oncogene family ISO (PMID:15602554) RGD PMID:15602554 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO
IEA
(PMID:23867755)
GO_REF:0000107
RGD
Ensembl
PMID:23867755 GO_REF:0000107 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Rbm22 RNA binding motif protein 22 ISS
ISO
GO_REF:0000024
(PMID:21122810)
UniProt
RGD
PMID:21122810 GO_REF:0000024 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Sfn stratifin ISO (MGI:3768327|PMID:17938205) RGD PMID:17938205 MGI:3768327 NCBI chr 5:151,823,422...151,824,937
Ensembl chr 5:151,823,887...151,824,633
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (PMID:19386626) RGD PMID:19386626 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Tpr translocated promoter region, nuclear basket protein IMP PMID:11839768 UniProt PMID:11839768 RGD:8553300 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link
G Wipf1 WAS/WASL interacting protein family, member 1 IDA N-WASP RGD PMID:11687573 RGD:634538 NCBI chr 3:60,150,001...60,207,125
Ensembl chr 3:60,150,021...60,166,013
JBrowse link
G Xpo4 exportin 4 ISO (PMID:16449645) RGD PMID:16449645 NCBI chr15:37,835,580...37,926,715
Ensembl chr15:37,835,580...37,926,715
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon ISO
ISS
(PMID:12917326)
GO_REF:0000024
RGD
UniProt
PMID:12917326 GO_REF:0000024 NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
JBrowse link
positive regulation of protein import into nucleus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 IMP NFATc4 RGD PMID:17640527 RGD:2313203 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Bag3 BAG cochaperone 3 ISO (PMID:26159920) RGD PMID:26159920 NCBI chr 1:199,941,258...199,965,191
Ensembl chr 1:199,941,161...199,965,191
JBrowse link
G Brca1 BRCA1, DNA repair associated IMP RGD PMID:19074549 RGD:10059411 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Cdh1 cadherin 1 ISO (PMID:16338932) RGD PMID:16338932 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:18356527 RGD:2316481 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 ISO
ISS
(PMID:18815128)
GO_REF:0000024
RGD
UniProt
PMID:18815128 GO_REF:0000024 NCBI chr 1:192,169,634...192,173,228
Ensembl chr 1:192,169,841...192,173,253
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 ISO (PMID:15367675) RGD PMID:15367675 NCBI chr 5:136,533,791...136,541,795
Ensembl chr 5:136,533,792...136,541,795
JBrowse link
G Ect2 epithelial cell transforming 2 ISO (MGI:3762312|PMID:17904126) RGD PMID:17904126 MGI:3762312 NCBI chr 2:112,769,385...112,831,476
Ensembl chr 2:112,769,385...112,831,476
JBrowse link
G Efcab7 EF-hand calcium binding domain 7 ISO (MGI:5908325|PMID:24582806) RGD PMID:24582806 MGI:5908325 NCBI chr 5:118,673,835...118,724,581
Ensembl chr 5:118,541,979...118,724,581
JBrowse link
G Ep300 E1A binding protein p300 IMP Smad-2/3/4 RGD PMID:18292803 RGD:2312266 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Flna filamin A ISO (PMID:15684392) RGD PMID:15684392 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:108075 (MGI:3686547|PMID:17043310) RGD PMID:17043310 MGI:3686547 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IMP Mapk1/3 RGD PMID:24262995 RGD:39939015 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Hcls1 hematopoietic cell specific Lyn substrate 1 ISO (PMID:23001182) RGD PMID:23001182 NCBI chr11:66,736,966...66,759,402
Ensembl chr11:66,736,966...66,759,402
JBrowse link
G Hdac3 histone deacetylase 3 ISS
ISO
IEA
GO_REF:0000024
(PMID:25190803)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25190803 GO_REF:0000024, GO_REF:0000107 NCBI chr18:31,073,057...31,094,347
Ensembl chr18:31,073,058...31,094,303
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IMP RGD PMID:20980790 RGD:5686397 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IMP RGD PMID:20980790 RGD:5686397 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hyal2 hyaluronidase 2 IEA
ISO
GO_REF:0000107
(MGI:3851310|PMID:19366691)
Ensembl
RGD
PMID:19366691 GO_REF:0000107, MGI:3851310 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Ifng interferon gamma ISO (PMID:22504299) RGD PMID:22504299 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Il6 interleukin 6 IDA Stat3 RGD PMID:12015387 RGD:2306946 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Ipo5 importin 5 ISO (MGI:5504359|PMID:22730302) RGD PMID:22730302 MGI:5504359 NCBI chr15:106,243,110...106,293,326
Ensembl chr15:106,257,650...106,292,112
JBrowse link
G Jak2 Janus kinase 2 IMP Stat3 RGD PMID:15530849 RGD:1641930 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Jup junction plakoglobin ISO (PMID:10825188), (PMID:14661054) RGD PMID:10825188, PMID:14661054 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Lep leptin ISO (MGI:4889014|PMID:21234744) RGD PMID:21234744 MGI:4889014 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IMP PMID:19524539 UniProt PMID:19524539 RGD:12793003 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk14 mitogen activated protein kinase 14 IEA
ISO
GO_REF:0000107
(MGI:3687609|PMID:16954198)
Ensembl
RGD
PMID:16954198 GO_REF:0000107, MGI:3687609 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:18818105) RGD PMID:18818105 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567
JBrowse link
G Nutf2 nuclear transport factor 2 IMP RGD PMID:9368653 RGD:9831374 NCBI chr19:37,830,917...37,852,192
Ensembl chr19:37,830,917...37,852,189
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISS
ISO
IEA
GO_REF:0000024
(MGI:4442277|PMID:20348926)
(PMID:20348923)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20348923, PMID:20348926 GO_REF:0000024, GO_REF:0000107, MGI:4442277 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 ISS
ISO
IEA
GO_REF:0000024
(MGI:4442277|PMID:20348926)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20348926 GO_REF:0000024, GO_REF:0000107, MGI:4442277 NCBI chr16:20,415,109...20,424,982
Ensembl chr16:20,416,432...20,424,980
JBrowse link
G Prkcd protein kinase C, delta ISO
IEA
(PMID:19059439)
GO_REF:0000107
RGD
Ensembl
PMID:19059439 GO_REF:0000107 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Prkcq protein kinase C, theta IMP RGD PMID:12697665 RGD:724661 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Prkd1 protein kinase D1 ISO (MGI:5787845|PMID:27184844) RGD PMID:27184844 MGI:5787845 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Psen1 presenilin 1 ISO (PMID:10508860) RGD PMID:10508860 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP Nfkb p65 RGD PMID:20472710 RGD:4891488 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 ISO (MGI:5562517|PMID:23871208) RGD PMID:23871208 MGI:5562517 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 IMP RGD PMID:12483215 RGD:9835024 NCBI chr 1:103,197,918...103,258,309
Ensembl chr 1:103,197,915...103,256,823
JBrowse link
G Ran RAN, member RAS oncogene family ISO (PMID:18691641) RGD PMID:18691641 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rbm22 RNA binding motif protein 22 ISS
ISO
GO_REF:0000024
(PMID:21122810)
UniProt
RGD
PMID:21122810 GO_REF:0000024 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:108075 (MGI:3686547|PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107, MGI:3686547 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO
GO_REF:0000107
MGI:95729|MGI:98297 (MGI:3686547|PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107, MGI:3686547 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Tardbp TAR DNA binding protein ISO (MGI:5920587|PMID:28585542) RGD PMID:28585542 MGI:5920587 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tek TEK receptor tyrosine kinase ISO (MGI:4437182|PMID:20060382) RGD PMID:20060382 MGI:4437182 NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:19366691)
GO_REF:0000024
RGD
AgBase
PMID:19366691 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IMP NF-kappaB RGD PMID:20967881 RGD:5130945 NCBI chr 4:157,864,905...157,877,634
Ensembl chr 4:157,864,969...157,877,633
JBrowse link
G Tpr translocated promoter region, nuclear basket protein ISO
ISS
(PMID:18794356)
GO_REF:0000024
RGD
UniProt
PMID:18794356 GO_REF:0000024 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link
G Trim28 tripartite motif-containing 28 ISS
ISO
GO_REF:0000024
(PMID:23665872)
UniProt
RGD
PMID:23665872 GO_REF:0000024 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats ISO MGI:3043446 (MGI:3056865|PMID:15271982) RGD PMID:15271982 MGI:3056865 NCBI chr 8:65,686,586...65,774,940
Ensembl chr 8:65,686,648...65,774,989
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 IEA
ISO
GO_REF:0000107
(PMID:21118991)
Ensembl
RGD
PMID:21118991 GO_REF:0000107 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:25190803) RGD PMID:25190803 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO (PMID:24048733) RGD PMID:24048733 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zic1 Zic family member 1 ISO (MGI:3688043|PMID:11238441) RGD PMID:11238441 MGI:3688043 NCBI chr 8:98,733,715...98,738,960
Ensembl chr 8:98,734,295...98,738,446
JBrowse link
G Zpr1 ZPR1 zinc finger ISO
IBA
(PMID:11283611)
PMID:21873635
(MGI:3575865|PMID:15767679), (MGI:5424069|PMID:22422766)
RGD PMID:11283611, PMID:15767679, PMID:22422766, PMID:21873635 MGI:3575865, MGI:5424069, RGD:13792537 NCBI chr 8:50,563,047...50,572,621
Ensembl chr 8:50,563,047...50,572,621
JBrowse link
positive regulation of ribosomal small subunit export from nucleus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Riok2 RIO kinase 2 ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:59,130,008...59,146,457
Ensembl chr 1:59,129,951...59,146,776
JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO (PMID:19864460) RGD PMID:19864460 NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:11402034) RGD PMID:11402034 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ISO
ISS
(PMID:21613532)
GO_REF:0000024
RGD
UniProt
PMID:21613532 GO_REF:0000024 NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
G Rbm26 RNA binding motif protein 26 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:89,262,683...89,339,323
Ensembl chr15:89,266,710...89,339,323
JBrowse link
G Rbm27 RNA binding motif protein 27 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:36,596,568...36,657,157
Ensembl chr18:36,596,585...36,656,314
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    positive regulation of biological process 6643
      positive regulation of transport 1086
        positive regulation of intracellular transport 222
          positive regulation of nucleocytoplasmic transport 78
            positive regulation of RNA export from nucleus + 8
            positive regulation of RNA import into nucleus 0
            positive regulation of protein export from nucleus + 21
            positive regulation of protein import into nucleus 53
Path 2
Term Annotations click to browse term
  biological_process 20030
    cellular process 18802
      cellular localization 2967
        establishment of localization in cell 2178
          intracellular transport 1514
            nuclear transport 335
              nucleocytoplasmic transport 334
                regulation of nucleocytoplasmic transport 134
                  positive regulation of nucleocytoplasmic transport 78
                    positive regulation of RNA export from nucleus + 8
                    positive regulation of RNA import into nucleus 0
                    positive regulation of protein export from nucleus + 21
                    positive regulation of protein import into nucleus 53
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.