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ONTOLOGY REPORT - ANNOTATIONS


Term:hydroxylysine metabolic process
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Accession:GO:0046946 term browser browse the term
Definition:The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.
Synonyms:exact_synonym: hydroxylysine metabolism


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hydroxylysine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 IEA
ISO
GO_REF:0000107
(PMID:10934207)
Ensembl
RGD
PMID:10934207 GO_REF:0000107 NCBI chr 8:99,977,334...100,059,736
Ensembl chr 8:99,977,334...100,059,736
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO (MGI:MGI:6202004|PMID:16447251) RGD PMID:16447251 MGI:MGI:6202004 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20015
    metabolic process 12259
      cellular metabolic process 11067
        cellular modified amino acid metabolic process 187
          hydroxylysine metabolic process 2
            hydroxylysine biosynthetic process 2
            hydroxylysine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 20015
    cellular process 18788
      cellular metabolic process 11067
        organic acid metabolic process 1090
          oxoacid metabolic process 1061
            carboxylic acid metabolic process 1005
              cellular amino acid metabolic process 275
                alpha-amino acid metabolic process 199
                  aspartate family amino acid metabolic process 41
                    hydroxylysine metabolic process 2
                      hydroxylysine biosynthetic process 2
                      hydroxylysine catabolic process 0
paths to the root

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