Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle transport along microtubule
go back to main search page
Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


show annotations for term's descendants           Sort by:
 
vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicdl1 BICD family like cargo adaptor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:46,615,597...46,703,287
Ensembl chr12:46,615,649...46,703,287
JBrowse link
G Bicdl2 BICD family like cargo adaptor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,980,696...12,989,133
Ensembl chr10:12,980,674...12,992,780
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:22261744) RGD PMID:22261744 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 IDA
ISO
IEA
PMID:14985359
(PMID:24561039)
GO_REF:0000107
RGD
Ensembl
PMID:24561039, PMID:14985359 GO_REF:0000107, RGD:8553555 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:17,542,374...17,640,718
Ensembl chr10:17,542,374...17,640,718
JBrowse link
G Hap1 huntingtin-associated protein 1 ISO
IBA
IEA
(MGI:MGI:3046393|PMID:15242649)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15242649, PMID:21873635 GO_REF:0000107, MGI:MGI:3046393, RGD:13792537 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Htt huntingtin ISO
IEA
(MGI:MGI:3046393|PMID:15242649)
(PMID:20515468)
GO_REF:0000107
RGD
Ensembl
PMID:15242649, PMID:20515468 GO_REF:0000107, MGI:MGI:3046393 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Kif5b kinesin family member 5B IDA
ISO
PMID:14985359
(PMID:28426968)
MGI:MGI:109596 (MGI:MGI:3763812|PMID:17360972)
RGD PMID:17360972, PMID:28426968, PMID:14985359 MGI:MGI:3763812, RGD:8553555 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Nde1 nudE neurodevelopment protein 1 ISO
IBA
MGI:MGI:109520|MGI:MGI:1932915 (MGI:MGI:3588829|PMID:16107726)
PMID:21873635
RGD PMID:16107726, PMID:21873635 MGI:MGI:3588829, RGD:13792537 NCBI chr10:860,513...904,624
Ensembl chr10:860,521...896,938
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 ISO
IBA
MGI:MGI:109520|MGI:MGI:1914453 (MGI:MGI:3588829|PMID:16107726)
PMID:21873635
RGD PMID:16107726, PMID:21873635 MGI:MGI:3588829, RGD:13792537 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO
IBA
MGI:MGI:1914453|MGI:MGI:1932915 (MGI:MGI:3588829|PMID:16107726)
PMID:21873635
RGD PMID:16107726, PMID:21873635 MGI:MGI:3588829, RGD:13792537 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Prkcz protein kinase C, zeta IMP Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chr 5:172,658,071...172,769,492
Ensembl chr 5:172,658,748...172,769,421
JBrowse link
G Rab1a RAB1A, member RAS oncogene family IMP
ISO
PMID:21303926
(PMID:21303926)
RGD PMID:21303926, PMID:21303926 RGD:8554665 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 ISO MGI:MGI:2386261 (MGI:MGI:3758152|PMID:17190838) RGD PMID:17190838 MGI:MGI:3758152 NCBI chr 3:108,984,029...109,044,420
Ensembl chr 3:108,984,029...109,044,420
JBrowse link
G Trak1 trafficking kinesin protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:129,946,596...130,106,382
Ensembl chr 8:130,009,573...130,106,382
JBrowse link
G Trak2 trafficking kinesin protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:65,698,706...65,763,351
Ensembl chr 9:65,698,712...65,763,273
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 IDA PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:83,600,614...83,670,121
Ensembl chr 7:83,600,617...83,670,356
JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 1:143,284,041...143,315,846
Ensembl chr 1:143,283,996...143,315,633
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr15:3,435,998...3,454,281
Ensembl chr15:3,436,361...3,454,279
JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr16:74,075,842...74,091,230
Ensembl chr16:74,076,812...74,091,139
JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr18:40,732,472...40,798,064
Ensembl chr18:40,732,480...40,797,761
JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr 1:141,612,961...141,655,417
Ensembl chr 1:141,612,963...141,655,894
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 7:3,342,630...3,346,238
Ensembl chr 7:3,342,630...3,346,238
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr 1:263,913,901...263,920,989
Ensembl chr 1:263,913,854...263,920,962
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr14:79,013,808...79,015,108
Ensembl chr14:79,013,807...79,015,112
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO
IBA
ISS
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21998198, PMID:21873635 GO_REF:0000024, MGI:MGI:5437407, RGD:13792537 NCBI chr17:20,090,136...20,182,332
Ensembl chr17:20,090,246...20,182,206
JBrowse link
G Madd MAP-kinase activating death domain ISO (MGI:MGI:6189386|PMID:18849981) RGD PMID:18849981 MGI:MGI:6189386 NCBI chr 3:79,960,301...80,003,023
Ensembl chr 3:79,960,301...80,003,032
JBrowse link
G Snapin SNAP-associated protein ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Trim46 tripartite motif-containing 46 ISO (MGI:MGI:5708763|PMID:26671463) RGD PMID:26671463 MGI:MGI:5708763 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:134,958,854...135,085,769
Ensembl chr 6:134,958,854...135,085,769
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:220,474,485...220,480,723
Ensembl chr 1:220,474,493...220,480,132
JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 ISO
IBA
(PMID:20100911)
PMID:21873635
RGD PMID:20100911, PMID:21873635 RGD:13792537 NCBI chr 8:132,844,042...132,910,905
Ensembl chr 8:132,844,043...132,911,193
JBrowse link
G Kif13a kinesin family member 13A ISO (MGI:MGI:5142383|PMID:11106728) RGD PMID:11106728 MGI:MGI:5142383 NCBI chr17:18,151,582...18,335,027
Ensembl chr17:18,151,982...18,335,019
JBrowse link
G Kif23 kinesin family member 23 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:66,866,043...66,893,241
Ensembl chr 8:66,866,082...66,893,196
JBrowse link
G Kif5b kinesin family member 5B ISO (MGI:MGI:3763812|PMID:17360972) RGD PMID:17360972 MGI:MGI:3763812 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Trim46 tripartite motif-containing 46 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:168,396,034...168,466,968
Ensembl chr 4:168,396,775...168,464,352
JBrowse link
G Map2 microtubule-associated protein 2 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 ISO
IEA
IMP
(PMID:24643070)
GO_REF:0000107
(MGI:MGI:5604606|PMID:24643070)
RGD
Ensembl
PMID:24643070, PMID:24643070 GO_REF:0000107, MGI:MGI:5604606, RGD:30309925 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Kif5a kinesin family member 5A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        establishment of organelle localization 406
          organelle transport along microtubule 84
            vesicle transport along microtubule 49
              anterograde neuronal dense core vesicle transport + 7
              minus-end-directed vesicle transport along microtubule 1
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 4
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 20
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular localization 2937
        establishment of localization in cell 2156
          intracellular transport 1511
            cytoskeleton-dependent intracellular transport 200
              transport along microtubule 169
                organelle transport along microtubule 84
                  vesicle transport along microtubule 49
                    anterograde neuronal dense core vesicle transport + 7
                    minus-end-directed vesicle transport along microtubule 1
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 4
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 20
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.