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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle transport along microtubule
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Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


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vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BICDL1 BICD family like cargo adaptor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:119,989,236...120,094,495
Ensembl chr12:119,989,869...120,094,494
JBrowse link
G BICDL2 BICD family like cargo adaptor 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:3,027,682...3,036,985
Ensembl chr16:3,027,682...3,036,944
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin IMP (PMID:22261744) UniProtKB PMID:22261744 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 IMP
ISS
(PMID:24561039) UniProtKB
HGNC
PMID:24561039 GO_REF:0000024 NCBI chr 7:95,772,554...96,110,322
Ensembl chr 7:95,772,506...96,110,322
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873
JBrowse link
G HAP1 huntingtin associated protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:41,717,739...41,734,646
Ensembl chr17:41,717,742...41,734,644
JBrowse link
G HTT huntingtin IMP (PMID:20515468) UniProtKB PMID:20515468 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,422...3,243,960
JBrowse link
G KIF5B kinesin family member 5B ISS
IDA
(PMID:28426968) HGNC
ARUK-UCL
PMID:28426968 GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,817...66,492,312
Ensembl chr15:66,386,817...66,492,312
JBrowse link
G NDE1 nudE neurodevelopment protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:15,643,267...15,726,353
Ensembl chr16:15,643,267...15,734,691
Ensembl chr16:15,643,267...15,734,691
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:8,435,884...8,472,744
Ensembl chr17:8,413,131...8,490,411
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISS
IBA
(PMID:10729324)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:10729324, PMID:21873635 NCBI chr17:2,593,210...2,685,617
Ensembl chr17:2,593,210...2,685,615
JBrowse link
G PRKCZ protein kinase C zeta IEA Ensembl GO_REF:0000107 NCBI chr 1:2,050,411...2,185,395
Ensembl chr 1:2,050,411...2,185,395
JBrowse link
G RAB1A RAB1A, member RAS oncogene family IMP (PMID:21303926) UniProtKB PMID:21303926 NCBI chr 2:65,086,854...65,130,132
Ensembl chr 2:65,070,696...65,130,331
JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 ISO (MGI:3758152|PMID:17190838) MGI PMID:17190838 MGI:3758152 NCBI chr15:38,488,097...38,564,814
Ensembl chr15:38,488,103...38,565,575
JBrowse link
G TRAK1 trafficking kinesin protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:42,013,802...42,225,890
Ensembl chr 3:42,013,802...42,225,890
JBrowse link
G TRAK2 trafficking kinesin protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:201,377,207...201,451,577
Ensembl chr 2:201,377,207...201,451,500
JBrowse link
G VAMP7 vesicle associated membrane protein 7 IEA Ensembl GO_REF:0000107 NCBI chr  X:155,881,318...155,943,769
NCBI chr  Y:57,067,838...57,130,289
Ensembl chr  X:155,881,345...155,943,769
JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293
Ensembl chr 2:240,713,761...240,824,293
JBrowse link
G KIF1B kinesin family member 1B IEA Ensembl GO_REF:0000107 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
JBrowse link
G KIF1C kinesin family member 1C ISS ARUK-UCL GO_REF:0000024 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401
JBrowse link
G KIF5B kinesin family member 5B ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link
G SYBU syntabulin IEA Ensembl GO_REF:0000107 NCBI chr 8:109,573,978...109,691,600
Ensembl chr 8:109,573,978...109,691,791
JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:78,000,522...78,294,704
Ensembl chr 5:78,000,525...78,294,755
Ensembl chr 5:78,000,525...78,294,755
JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr15:82,659,281...82,709,875
Ensembl chr15:82,659,281...82,709,946
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr19:2,100,988...2,151,566
Ensembl chr19:2,100,988...2,164,468
JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 ISS UniProtKB GO_REF:0000024 NCBI chr10:74,120,012...74,151,067
Ensembl chr10:74,120,255...74,151,063
JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 ISS UniProtKB GO_REF:0000024 NCBI chr 8:42,153,035...42,171,183
Ensembl chr 8:42,152,946...42,171,673
JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 ISS UniProtKB GO_REF:0000024 NCBI chr 5:115,841,606...115,914,081
Ensembl chr 5:115,841,592...115,914,081
JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 ISS UniProtKB GO_REF:0000024 NCBI chr15:89,830,599...89,893,994
Ensembl chr15:89,830,599...89,894,638
JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:55,716,034...55,719,707
Ensembl chr12:55,716,037...55,720,087
JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 ISS UniProtKB GO_REF:0000024 NCBI chr10:100,273,278...100,286,692
Ensembl chr10:100,273,280...100,286,680
JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 ISS UniProtKB GO_REF:0000024 NCBI chr19:45,178,784...45,202,715
Ensembl chr19:45,178,784...45,216,933
Ensembl chr19:45,178,784...45,216,933
JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 ISS UniProtKB GO_REF:0000024 NCBI chr 4:6,716,174...6,717,664
Ensembl chr 4:6,716,174...6,717,664
JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 ISS UniProtKB GO_REF:0000024 NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 6:15,522,803...15,663,058
Ensembl chr 6:15,522,801...15,663,058
Ensembl chr 6:15,522,801...15,663,058
JBrowse link
G MADD MAP kinase activating death domain ISO (MGI:6189386|PMID:18849981) SynGO PMID:18849981 MGI:6189386 NCBI chr11:47,269,188...47,330,031
Ensembl chr11:47,269,161...47,330,031
JBrowse link
G SNAPIN SNAP associated protein ISS UniProtKB GO_REF:0000024 NCBI chr 1:153,658,654...153,661,852
Ensembl chr 1:153,658,703...153,661,852
JBrowse link
G TRIM46 tripartite motif containing 46 IEA Ensembl GO_REF:0000107 NCBI chr 1:155,173,381...155,184,971
Ensembl chr 1:155,173,787...155,184,971
JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:101,964,573...102,056,443
Ensembl chr14:101,964,573...102,056,443
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 IEA Ensembl GO_REF:0000107 NCBI chr11:66,278,175...66,284,206
Ensembl chr11:66,278,175...66,285,301
JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 IMP
IEA
IBA
(PMID:20100911)
(PMID:21873635)
UniProtKB
InterPro
GO_Central
PMID:20100911, PMID:21873635 GO_REF:0000002 NCBI chr 3:45,917,903...45,995,824
Ensembl chr 3:45,917,899...45,995,824
JBrowse link
G KIF13A kinesin family member 13A IEA
ISS
InterPro
UniProtKB
GO_REF:0000002, GO_REF:0000024 NCBI chr 6:17,759,126...17,987,635
Ensembl chr 6:17,759,183...17,987,635
JBrowse link
G KIF13B kinesin family member 13B IEA InterPro GO_REF:0000002 NCBI chr 8:29,067,278...29,263,385
Ensembl chr 8:29,067,278...29,263,124
JBrowse link
G KIF23 kinesin family member 23 IEA InterPro GO_REF:0000002 NCBI chr15:69,414,325...69,448,427
Ensembl chr15:69,414,246...69,448,427
JBrowse link
G KIF3A kinesin family member 3A TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr 5:132,688,808...132,737,563
Ensembl chr 5:132,692,628...132,737,638
JBrowse link
G KIF3B kinesin family member 3B TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr20:32,277,651...32,335,011
Ensembl chr20:32,277,651...32,335,011
JBrowse link
G KIF5B kinesin family member 5B IEA Ensembl GO_REF:0000107 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link
G KIFAP3 kinesin associated protein 3 TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr 1:169,921,326...170,085,203
Ensembl chr 1:169,921,326...170,085,208
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP2 microtubule associated protein 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,118
Ensembl chr 2:209,424,058...209,734,118
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G TRIM46 tripartite motif containing 46 ISS ARUK-UCL GO_REF:0000024 NCBI chr 1:155,173,381...155,184,971
Ensembl chr 1:155,173,787...155,184,971
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,357,078...12,471,233
Ensembl chr12:12,357,078...12,471,233
JBrowse link
G MAP2 microtubule associated protein 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,118
Ensembl chr 2:209,424,058...209,734,118
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STK11 serine/threonine kinase 11 IMP (PMID:24643070) UniProt PMID:24643070 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431
Ensembl chr19:1,177,558...1,228,431
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293
Ensembl chr 2:240,713,761...240,824,293
JBrowse link
G KIF1B kinesin family member 1B IEA Ensembl GO_REF:0000107 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
JBrowse link
G KIF1C kinesin family member 1C ISS ARUK-UCL GO_REF:0000024 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401
JBrowse link
G KIF5A kinesin family member 5A ISS ARUK-UCL GO_REF:0000024 NCBI chr12:57,550,039...57,586,633
Ensembl chr12:57,546,026...57,586,633
Ensembl chr12:57,546,026...57,586,633
JBrowse link
G KIF5B kinesin family member 5B ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18672
    localization 7210
      establishment of localization 5658
        establishment of organelle localization 491
          organelle transport along microtubule 93
            vesicle transport along microtubule 53
              anterograde neuronal dense core vesicle transport + 8
              minus-end-directed vesicle transport along microtubule 1
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 8
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 20
Path 2
Term Annotations click to browse term
  biological_process 18672
    cellular process 17690
      cellular localization 3779
        establishment of localization in cell 3016
          intracellular transport 1886
            cytoskeleton-dependent intracellular transport 219
              transport along microtubule 182
                organelle transport along microtubule 93
                  vesicle transport along microtubule 53
                    anterograde neuronal dense core vesicle transport + 8
                    minus-end-directed vesicle transport along microtubule 1
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 8
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.