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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle transport along microtubule
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Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


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vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicdl1 BICD family like cargo adaptor 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:115,648,174...115,731,844
Ensembl chr 5:115,648,175...115,731,621
JBrowse link
G Bicdl2 BICD family like cargo adaptor 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:23,644,605...23,668,621
Ensembl chr17:23,660,506...23,668,621
JBrowse link
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 7:126,571,207...126,585,817
Ensembl chr 7:126,571,207...126,585,817
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ISO MGI GO_REF:0000096, MGI:4417868, MGI:4834177 NCBI chr 6:5,725,600...6,028,039
Ensembl chr 6:5,725,639...6,028,039
JBrowse link
G Fbxw11 F-box and WD-40 domain protein 11 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:32,642,555...32,746,816
Ensembl chr11:32,642,724...32,746,816
JBrowse link
G Hap1 huntingtin-associated protein 1 IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:3046393|PMID:15242649)
GO_Central
MGI
PMID:15242649, PMID:21873635 MGI:3046393, MGI:6201960 NCBI chr11:100,347,327...100,356,982
Ensembl chr11:100,347,327...100,356,128
JBrowse link
G Htt huntingtin ISO
IDA
(MGI:3046393|PMID:15242649) MGI PMID:15242649 GO_REF:0000096, MGI:3046393, MGI:4834177 NCBI chr 5:34,761,721...34,912,534
Ensembl chr 5:34,761,740...34,912,534
JBrowse link
G Kif5b kinesin family member 5B ISO
IGI
(MGI:3763812|PMID:17360972) MGI PMID:17360972 GO_REF:0000096, MGI:3763812, MGI:4417868, MGI:4834177 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174
JBrowse link
G Kifc1 kinesin family member C1 IGI (MGI:3763812|PMID:17360972) MGI PMID:17360972 MGI:3763812 NCBI chr17:33,875,664...33,890,633
Ensembl chr17:33,875,659...33,890,661
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 9:64,185,769...64,253,605
Ensembl chr 9:64,185,770...64,253,631
JBrowse link
G Nde1 nudE neurodevelopment protein 1 IGI
IBA
(MGI:3588829|PMID:16107726)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:16107726, PMID:21873635 MGI:3588829, MGI:6201960 NCBI chr16:14,163,275...14,192,928
Ensembl chr16:14,163,275...14,192,928
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 IBA
IGI
(MGI:6201960|PMID:21873635)
(MGI:3588829|PMID:16107726)
GO_Central
MGI
PMID:16107726, PMID:21873635 MGI:3588829, MGI:6201960 NCBI chr11:68,821,434...68,853,146
Ensembl chr11:68,821,434...68,871,858
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 IBA
IGI
(MGI:6201960|PMID:21873635)
(MGI:3588829|PMID:16107726)
GO_Central
MGI
PMID:16107726, PMID:21873635 MGI:3588829, MGI:6201960 NCBI chr11:74,673,949...74,724,384
Ensembl chr11:74,673,949...74,724,670
JBrowse link
G Prkcz protein kinase C, zeta ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 4:155,260,118...155,361,428
Ensembl chr 4:155,260,129...155,361,361
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO MGI GO_REF:0000096, MGI:4417868, MGI:4834177 NCBI chr11:20,201,412...20,226,856
Ensembl chr11:20,201,432...20,226,856
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 IMP (MGI:3758152|PMID:17190838) MGI PMID:17190838 MGI:3758152 NCBI chr 2:117,279,983...117,342,877
Ensembl chr 2:117,279,993...117,343,001
JBrowse link
G Trak1 trafficking protein, kinesin binding 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:121,297,502...121,474,919
Ensembl chr 9:121,297,502...121,474,918
JBrowse link
G Trak2 trafficking protein, kinesin binding 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:58,900,449...58,974,345
Ensembl chr 1:58,900,449...58,973,430
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 ISO MGI GO_REF:0000096, MGI:4417868
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:93,015,455...93,102,039
Ensembl chr 1:93,015,464...93,101,951
JBrowse link
G Kif1b kinesin family member 1B ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 4:149,176,319...149,307,773
Ensembl chr 4:149,176,319...149,307,693
JBrowse link
G Kif1c kinesin family member 1C ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr11:70,700,396...70,731,970
Ensembl chr11:70,700,548...70,731,964
JBrowse link
G Sybu syntabulin (syntaxin-interacting) ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr15:44,671,856...44,788,070
Ensembl chr15:44,671,856...44,788,063
JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor-related protein complex 3, beta 1 subunit IMP
IBA
(MGI:5437407|PMID:21998198)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:21998198 MGI:5437407, MGI:6201960 NCBI chr13:94,358,960...94,566,316
Ensembl chr13:94,358,960...94,566,317
JBrowse link
G Ap3b2 adaptor-related protein complex 3, beta 2 subunit IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5437407|PMID:21998198)
GO_Central
UniProt
PMID:21873635, PMID:21998198 MGI:5437407, MGI:6201960 NCBI chr 7:81,460,399...81,493,997
Ensembl chr 7:81,460,399...81,493,925
JBrowse link
G Ap3d1 adaptor-related protein complex 3, delta 1 subunit IMP
IBA
(MGI:5437407|PMID:21998198)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:21998198 MGI:5437407, MGI:6201960 NCBI chr10:80,706,956...80,742,303
Ensembl chr10:80,706,956...80,742,264
JBrowse link
G Ap3m1 adaptor-related protein complex 3, mu 1 subunit IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr14:21,033,106...21,052,553
Ensembl chr14:21,031,442...21,052,508
JBrowse link
G Ap3m2 adaptor-related protein complex 3, mu 2 subunit IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 8:22,787,354...22,807,292
Ensembl chr 8:22,787,354...22,805,622
JBrowse link
G Ap3s1 adaptor-related protein complex 3, sigma 1 subunit IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr18:46,741,694...46,790,826
Ensembl chr18:46,741,876...46,790,826
JBrowse link
G Ap3s2 adaptor-related protein complex 3, sigma 2 subunit IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 7:79,875,325...79,920,640
Ensembl chr 7:79,875,325...79,920,649
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr10:128,919,914...128,923,524
Ensembl chr10:128,917,882...128,924,035
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr19:44,139,246...44,146,470
Ensembl chr19:44,139,246...44,146,446
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 7:19,505,783...19,508,380
Ensembl chr 7:19,504,486...19,508,367
JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 5:36,747,374...36,748,679
Ensembl chr 5:36,747,378...36,748,650
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr13:38,602,698...38,637,117
Ensembl chr13:38,592,842...38,635,109
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 2:122,738,505...122,749,487
Ensembl chr 2:122,738,503...122,749,475
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IMP
IBA
(MGI:5437407|PMID:21998198)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:21998198 MGI:5437407, MGI:6201960 NCBI chr13:44,922,079...45,002,096
Ensembl chr13:44,922,075...45,002,147
JBrowse link
G Madd MAP-kinase activating death domain IMP
IDA
(MGI:6189386|PMID:18849981) SynGO PMID:18849981 MGI:6189386 NCBI chr 2:91,137,360...91,184,006
Ensembl chr 2:91,137,360...91,183,837
JBrowse link
G Snapin SNAP-associated protein IMP (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 3:90,488,026...90,491,013
Ensembl chr 3:90,488,026...90,491,033
JBrowse link
G Trim46 tripartite motif-containing 46 IMP (MGI:5708763|PMID:26671463) MGI PMID:26671463 MGI:5708763 NCBI chr 3:89,234,169...89,246,358
Ensembl chr 3:89,234,177...89,246,309
JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:110,601,395...110,666,944
Ensembl chr12:110,601,452...110,666,945
JBrowse link
G Kifc1 kinesin family member C1 IMP (MGI:3763812|PMID:17360972) MGI PMID:17360972 MGI:3763812 NCBI chr17:33,875,664...33,890,633
Ensembl chr17:33,875,659...33,890,661
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr19:5,092,868...5,098,521
Ensembl chr19:5,092,868...5,098,521
JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain containing 1 ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:4834177, MGI:6201960 NCBI chr 9:123,789,500...123,851,899
Ensembl chr 9:123,789,500...123,851,899
JBrowse link
G Kif13a kinesin family member 13A IDA (MGI:5142383|PMID:11106728) UniProt PMID:11106728 MGI:5142383 NCBI chr13:46,749,087...46,929,917
Ensembl chr13:46,749,087...46,929,867
JBrowse link
G Kif23 kinesin family member 23 IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 9:61,917,277...61,946,810
Ensembl chr 9:61,915,905...61,946,774
JBrowse link
G Kif5b kinesin family member 5B IMP (MGI:3763812|PMID:17360972) MGI PMID:17360972 MGI:3763812 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:66,175,202...66,442,583
Ensembl chr 1:66,175,273...66,442,583
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr  X:74,026,592...74,085,690
Ensembl chr  X:74,026,592...74,135,363
JBrowse link
G Trim46 tripartite motif-containing 46 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 3:89,234,169...89,246,358
Ensembl chr 3:89,234,177...89,246,309
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:134,639,512...134,711,184
Ensembl chr 6:134,639,510...134,711,187
JBrowse link
G Map2 microtubule-associated protein 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:66,175,202...66,442,583
Ensembl chr 1:66,175,273...66,442,583
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr  X:74,026,592...74,085,690
Ensembl chr  X:74,026,592...74,135,363
JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 ISO
IMP
(MGI:5604606|PMID:24643070) MGI
UniProt
PMID:24643070 GO_REF:0000096, MGI:4417868, MGI:4834177, MGI:5604606 NCBI chr10:80,115,767...80,130,679
Ensembl chr10:80,115,803...80,130,682
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:93,015,455...93,102,039
Ensembl chr 1:93,015,464...93,101,951
JBrowse link
G Kif1b kinesin family member 1B ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 4:149,176,319...149,307,773
Ensembl chr 4:149,176,319...149,307,693
JBrowse link
G Kif1c kinesin family member 1C ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr11:70,700,396...70,731,970
Ensembl chr11:70,700,548...70,731,964
JBrowse link
G Kif5a kinesin family member 5A ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr10:127,225,695...127,266,348
Ensembl chr10:127,225,696...127,263,348
JBrowse link
G Kif5b kinesin family member 5B ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    localization 6231
      establishment of localization 4672
        establishment of organelle localization 408
          organelle transport along microtubule 85
            vesicle transport along microtubule 50
              anterograde neuronal dense core vesicle transport + 7
              minus-end-directed vesicle transport along microtubule 2
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 4
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 20
Path 2
Term Annotations click to browse term
  biological_process 23386
    cellular process 17420
      cellular localization 2859
        establishment of localization in cell 2102
          intracellular transport 1462
            cytoskeleton-dependent intracellular transport 198
              transport along microtubule 167
                organelle transport along microtubule 85
                  vesicle transport along microtubule 50
                    anterograde neuronal dense core vesicle transport + 7
                    minus-end-directed vesicle transport along microtubule 2
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 4
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.