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ONTOLOGY REPORT - ANNOTATIONS


Term:developmental pigmentation
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Accession:GO:0048066 term browser browse the term
Definition:The developmental process that results in the deposition of coloring matter in an organism, tissue or cell.
Synonyms:related_synonym: pigmentation during development


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developmental pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO MGI:MGI:1197519|MGI:MGI:2156165 (MGI:MGI:2154874|PMID:11709185), (MGI:MGI:2156164|PMID:8170972) RGD PMID:8170972, PMID:11709185 MGI:MGI:2154874, MGI:MGI:2156164 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l11 BCL2 like 11 ISO MGI:MGI:88138 (MGI:MGI:2154874|PMID:11709185) RGD PMID:11709185 MGI:MGI:2154874 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 ISO MGI:MGI:1857021 (MGI:MGI:3045416|PMID:15102850), (MGI:MGI:54946|PMID:7203014) RGD PMID:7203014, PMID:15102850 MGI:MGI:3045416, MGI:MGI:54946 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO MGI:MGI:1856106 (MGI:MGI:2177902|PMID:11912185) RGD PMID:11912185 MGI:MGI:2177902 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Dct dopachrome tautomerase ISO MGI:MGI:1856379 (MGI:MGI:3041903|PMID:15060160) RGD PMID:15060160 MGI:MGI:3041903 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
G Ednrb endothelin receptor type B ISO MGI:MGI:1856149 (MGI:MGI:3055244|PMID:15322542) RGD PMID:15322542 MGI:MGI:3055244 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Gna11 G protein subunit alpha 11 ISO
IEA
MGI:MGI:2151589 (MGI:MGI:3055244|PMID:15322542)
GO_REF:0000107
RGD
Ensembl
PMID:15322542 GO_REF:0000107, MGI:MGI:3055244 NCBI chr 7:11,033,400...11,047,284
Ensembl chr 7:11,033,317...11,047,437
JBrowse link
G Gnaq G protein subunit alpha q ISO
IEA
MGI:MGI:2151661 (MGI:MGI:3055244|PMID:15322542)
GO_REF:0000107
RGD
Ensembl
PMID:15322542 GO_REF:0000107, MGI:MGI:3055244 NCBI chr 1:233,382,778...233,622,584
Ensembl chr 1:233,382,708...233,622,786
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO MGI:MGI:1856161|MGI:MGI:1856164|MGI:MGI:1856266|MGI:MGI:2449782|MGI:MGI:2660628 (MGI:MGI:3055244|PMID:15322542), (MGI:MGI:3778519|PMID:18454205) RGD PMID:15322542, PMID:18454205 MGI:MGI:3055244, MGI:MGI:3778519 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Mreg melanoregulin ISO MGI:MGI:1856847 (MGI:MGI:3513741|PMID:15550542) RGD PMID:15550542 MGI:MGI:3513741 NCBI chr 9:79,490,058...79,559,768
Ensembl chr 9:79,490,050...79,545,024
JBrowse link
G Myo5a myosin VA ISO MGI:MGI:1856004 (MGI:MGI:3513741|PMID:15550542) RGD PMID:15550542 MGI:MGI:3513741 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO MGI:MGI:1856123 (MGI:MGI:2157189|PMID:11756244) RGD PMID:11756244 MGI:MGI:2157189 NCBI chr 1:114,661,970...114,987,433
Ensembl chr 1:114,679,537...114,987,433
JBrowse link
G Pax3 paired box 3 ISO MGI:MGI:1856173 (MGI:MGI:3055244|PMID:15322542) RGD PMID:15322542 MGI:MGI:3055244 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Slc45a2 solute carrier family 45, member 2 ISO MGI:MGI:1856227|MGI:MGI:1856581|MGI:MGI:1857540 (MGI:MGI:2156131|PMID:11700328) RGD PMID:11700328 MGI:MGI:2156131 NCBI chr 2:60,966,671...60,999,398
Ensembl chr 2:60,966,789...60,999,398
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO (MGI:MGI:5574413|PMID:24769727) RGD PMID:24769727 MGI:MGI:5574413 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
G Zic2 Zic family member 2 ISO MGI:MGI:1861983 (MGI:MGI:1861752|PMID:10932191) RGD PMID:10932191 MGI:MGI:1861752 NCBI chr15:108,908,366...108,913,812
Ensembl chr15:108,908,607...108,912,737
JBrowse link
endosome to melanosome transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd27 ankyrin repeat domain 27 ISO (MGI:MGI:5607516|PMID:21187829) RGD PMID:21187829 MGI:MGI:5607516 NCBI chr 1:91,857,048...91,958,763
Ensembl chr 1:91,857,057...91,958,763
JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 ISO (PMID:22511774) RGD PMID:22511774 NCBI chr19:41,805,252...41,860,076 JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 ISO (PMID:19841138) RGD PMID:19841138 NCBI chr16:19,288,354...19,303,818
Ensembl chr16:19,288,355...19,303,824
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 ISO (PMID:17182842) RGD PMID:17182842 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO
ISS
(PMID:17182842)
GO_REF:0000024
RGD
UniProt
PMID:17182842 GO_REF:0000024 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Cd63 Cd63 molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21962903)
Ensembl
UniProt
RGD
PMID:21962903 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:3,320,250...3,335,583
Ensembl chr 7:3,320,103...3,335,582
JBrowse link
G Rab32 RAB32, member RAS oncogene family ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 1:4,638,663...4,653,220
Ensembl chr 1:4,637,491...4,653,210
JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 1:152,072,716...152,153,449
Ensembl chr 1:152,072,665...152,153,449
JBrowse link
erythrophore differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sod2 superoxide dismutase 2 ISO MGI:MGI:1857344 (MGI:MGI:3505659|PMID:15205258) RGD PMID:15205258 MGI:MGI:3505659 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
eye pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 ISO (PMID:20093472) RGD PMID:20093472 NCBI chr  X:11,137,889...11,164,854
Ensembl chr  X:11,136,939...11,164,915
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 ISO (MGI:MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:MGI:4849309 NCBI chr 1:261,989,178...262,015,282
Ensembl chr 1:261,989,178...262,015,153
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:MGI:2136645 (MGI:MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
melanocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:MGI:104554|MGI:MGI:2156165|MGI:MGI:2158305 (MGI:MGI:2154874|PMID:11709185), (MGI:MGI:2180980|PMID:12086670), (MGI:MGI:81816|PMID:8758925)
Ensembl
RGD
PMID:8758925, PMID:11709185, PMID:12086670 GO_REF:0000107, MGI:MGI:2154874, MGI:MGI:2180980, MGI:MGI:81816 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO MGI:MGI:1856982 (MGI:MGI:77000|PMID:2379821) RGD PMID:2379821 MGI:MGI:77000 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO
IBA
ISS
(PMID:8901575)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:8901575, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Edn3 endothelin 3 ISO (MGI:MGI:85072|PMID:9012511) RGD PMID:9012511 MGI:MGI:85072 NCBI chr 3:172,856,730...172,879,276
Ensembl chr 3:172,856,733...172,880,450
JBrowse link
G Ednrb endothelin receptor type B IDA
ISO
MGI:MGI:1856148 (MGI:MGI:77000|PMID:2379821), (MGI:MGI:85072|PMID:9012511) RGD PMID:2379821, PMID:9012511, PMID:11709437 MGI:MGI:77000, MGI:MGI:85072, RGD:628459 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISS
ISO
IEA
GO_REF:0000024
(PMID:28964717)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28964717 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:3720956 (MGI:MGI:3796727|PMID:18397875) RGD PMID:18397875 MGI:MGI:3796727 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 ISO MGI:MGI:1856712 (MGI:MGI:2175993|PMID:11836498) RGD PMID:11836498 MGI:MGI:2175993 NCBI chr 1:261,989,178...262,015,282
Ensembl chr 1:261,989,178...262,015,153
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 ISO MGI:MGI:1856931 (MGI:MGI:2175993|PMID:11836498) RGD PMID:11836498 MGI:MGI:2175993 NCBI chr12:50,285,239...50,315,893
Ensembl chr12:50,285,278...50,314,406
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 ISO
IBA
MGI:MGI:1856544 (MGI:MGI:77000|PMID:2379821)
PMID:21873635
RGD PMID:2379821, PMID:21873635 MGI:MGI:77000, RGD:13792537 NCBI chr 1:265,761,818...265,764,427
Ensembl chr 1:265,761,738...265,764,437
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO (MGI:MGI:3612335|PMID:15768389) RGD PMID:15768389 MGI:MGI:3612335 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Lrmda leucine rich melanocyte differentiation associated ISO (PMID:23395477) RGD PMID:23395477 NCBI chr15:1,269,869...2,346,246 JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5049797|PMID:21610032)
Ensembl
UniProt
RGD
PMID:21610032 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5049797 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mitf melanocyte inducing transcription factor ISO
IBA
MGI:MGI:1856088|MGI:MGI:1856095|MGI:MGI:88138 (MGI:MGI:2180980|PMID:12086670), (MGI:MGI:77000|PMID:2379821)
PMID:21873635
RGD PMID:2379821, PMID:12086670, PMID:21873635 MGI:MGI:2180980, MGI:MGI:77000, RGD:13792537 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Mlph melanophilin ISO MGI:MGI:1856674 (MGI:MGI:2149529|PMID:11504925), (MGI:MGI:77000|PMID:2379821) RGD PMID:2379821, PMID:11504925 MGI:MGI:2149529, MGI:MGI:77000 NCBI chr 9:98,072,965...98,108,429
Ensembl chr 9:98,073,038...98,108,433
JBrowse link
G Mreg melanoregulin ISO
IBA
MGI:MGI:1856847 (MGI:MGI:68866|PMID:7828830), (MGI:MGI:77000|PMID:2379821)
PMID:21873635
RGD PMID:2379821, PMID:7828830, PMID:21873635 MGI:MGI:68866, MGI:MGI:77000, RGD:13792537 NCBI chr 9:79,490,058...79,559,768
Ensembl chr 9:79,490,050...79,545,024
JBrowse link
G Myo5a myosin VA ISO
IEA
MGI:MGI:1856004 (MGI:MGI:59447|PMID:1996138), (MGI:MGI:68866|PMID:7828830), (MGI:MGI:77000|PMID:2379821)
GO_REF:0000107
RGD
Ensembl
PMID:1996138, PMID:2379821, PMID:7828830 GO_REF:0000107, MGI:MGI:59447, MGI:MGI:68866, MGI:MGI:77000 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO MGI:MGI:1856114 (MGI:MGI:77000|PMID:2379821) RGD PMID:2379821 MGI:MGI:77000 NCBI chr 1:114,661,970...114,987,433
Ensembl chr 1:114,679,537...114,987,433
JBrowse link
G Olr59 olfactory receptor 59 ISS
ISO
IEA
GO_REF:0000024
(PMID:27226631)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27226631 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:167,906,030...167,940,688
Ensembl chr 1:167,906,061...167,911,961
JBrowse link
G Rab27a RAB27A, member RAS oncogene family ISO MGI:MGI:1856656 (MGI:MGI:77000|PMID:2379821) RGD PMID:2379821 MGI:MGI:52947, MGI:MGI:77000 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221
JBrowse link
G Slc24a5 solute carrier family 24 member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:117,335,212...117,354,480
Ensembl chr 3:117,335,212...117,354,480
JBrowse link
G Sox10 SRY-box transcription factor 10 ISO MGI:MGI:3701358 (MGI:MGI:3701016|PMID:16790476) RGD PMID:16790476 MGI:MGI:3701016 NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523
JBrowse link
G Tyrp1 tyrosinase-related protein 1 ISO
IBA
MGI:MGI:1855962 (MGI:MGI:77000|PMID:2379821)
PMID:21873635
RGD PMID:2379821, PMID:21873635 MGI:MGI:77000, RGD:13792537 NCBI chr 5:98,387,291...98,406,083
Ensembl chr 5:98,387,291...98,406,083
JBrowse link
negative regulation of eye pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:3807630|PMID:17464332) RGD PMID:17464332 MGI:MGI:3807630 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
pigment cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd63 Cd63 molecule ISO (MGI:MGI:5569478|PMID:21962903) RGD PMID:21962903 MGI:MGI:5569478 NCBI chr 7:3,320,250...3,335,583
Ensembl chr 7:3,320,103...3,335,582
JBrowse link
pigment granule maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd63 Cd63 molecule ISO
ISS
(PMID:21962903)
GO_REF:0000024
RGD
UniProt
PMID:21962903 GO_REF:0000024 NCBI chr 7:3,320,250...3,335,583
Ensembl chr 7:3,320,103...3,335,582
JBrowse link
positive regulation of developmental pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO
IEA
MGI:MGI:99702 (MGI:MGI:894988|PMID:9241272)
GO_REF:0000107
RGD
Ensembl
PMID:9241272 GO_REF:0000107, MGI:MGI:894988 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO MGI:MGI:88138 (MGI:MGI:1352325|PMID:10674380), (MGI:MGI:894988|PMID:9241272) RGD PMID:9241272, PMID:10674380 MGI:MGI:1352325, MGI:MGI:894988 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
positive regulation of melanocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 ISO MGI:MGI:1916320|MGI:MGI:3766915 (MGI:MGI:3778519|PMID:18454205) RGD PMID:18454205 MGI:MGI:3778519 NCBI chr 7:135,465,021...135,630,941
Ensembl chr 7:135,466,884...135,630,654
JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 ISO MGI:MGI:2660628 (MGI:MGI:3778519|PMID:18454205) RGD PMID:18454205 MGI:MGI:3778519 NCBI chr 4:124,660,254...124,860,997
Ensembl chr 4:124,660,262...124,858,250
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:2158305 (MGI:MGI:3618415|PMID:16427619)
GO_REF:0000107
RGD
Ensembl
PMID:16427619 GO_REF:0000107, MGI:MGI:3618415 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Kitlg KIT ligand ISO (MGI:MGI:3618415|PMID:16427619) RGD PMID:16427619 MGI:MGI:3618415 NCBI chr 7:42,269,784...42,351,054
Ensembl chr 7:42,269,784...42,351,054
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO (MGI:MGI:5574413|PMID:24769727) RGD PMID:24769727 MGI:MGI:5574413 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
positive regulation of pigment cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO
ISS
(PMID:17182842)
GO_REF:0000024
RGD
UniProt
PMID:17182842 GO_REF:0000024 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
regulation of developmental pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 ISO MGI:MGI:1916320|MGI:MGI:2675831|MGI:MGI:3766915|MGI:MGI:96677 (MGI:MGI:3778519|PMID:18454205), (MGI:MGI:60945|PMID:14138974) RGD PMID:14138974, PMID:18454205 MGI:MGI:3778519, MGI:MGI:60945 NCBI chr 7:135,465,021...135,630,941
Ensembl chr 7:135,466,884...135,630,654
JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 ISO MGI:MGI:2660628 (MGI:MGI:3778519|PMID:18454205) RGD PMID:18454205 MGI:MGI:3778519 NCBI chr 4:124,660,254...124,860,997
Ensembl chr 4:124,660,262...124,858,250
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO MGI:MGI:1197519 (MGI:MGI:3767491|PMID:15818405) RGD PMID:15818405 MGI:MGI:3767491 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l11 BCL2 like 11 ISO MGI:MGI:88138 (MGI:MGI:3767491|PMID:15818405) RGD PMID:15818405 MGI:MGI:3767491 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Edn3 endothelin 3 ISO MGI:MGI:1856392 (MGI:MGI:60945|PMID:14138974) RGD PMID:14138974 MGI:MGI:60945 NCBI chr 3:172,856,730...172,879,276
Ensembl chr 3:172,856,733...172,880,450
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes ISO
IEA
MGI:MGI:1856687 (MGI:MGI:2450053|PMID:12538872)
GO_REF:0000107
RGD
Ensembl
PMID:12538872 GO_REF:0000107, MGI:MGI:2450053 NCBI chr12:38,459,816...38,482,903
Ensembl chr12:38,459,832...38,484,512
JBrowse link
regulation of eye pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spns2 sphingolipid transporter 2 ISO MGI:MGI:4460276 (MGI:MGI:5442641|PMID:22664872) RGD PMID:22664872 MGI:MGI:5442641 NCBI chr10:59,010,428...59,049,482
Ensembl chr10:59,010,428...59,049,482
JBrowse link
regulation of melanocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gna11 G protein subunit alpha 11 ISO
IEA
MGI:MGI:2682213 (MGI:MGI:3055244|PMID:15322542)
GO_REF:0000107
RGD
Ensembl
PMID:15322542 GO_REF:0000107, MGI:MGI:3055244 NCBI chr 7:11,033,400...11,047,284
Ensembl chr 7:11,033,317...11,047,437
JBrowse link
G Gnaq G protein subunit alpha q ISO
IEA
MGI:MGI:2681766 (MGI:MGI:3055244|PMID:15322542)
GO_REF:0000107
RGD
Ensembl
PMID:15322542 GO_REF:0000107, MGI:MGI:3055244 NCBI chr 1:233,382,778...233,622,584
Ensembl chr 1:233,382,708...233,622,786
JBrowse link
rhodopsin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grk3 G protein-coupled receptor kinase 3 IMP RGD PMID:17573483 RGD:5685371 NCBI chr12:49,626,871...49,750,389
Ensembl chr12:49,626,871...49,746,272
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    pigmentation 99
      developmental pigmentation 51
        cuticle pigmentation + 0
        eye pigment precursor transport 0
        eye pigmentation + 6
        negative regulation of developmental pigmentation + 1
        pigment cell differentiation + 39
        pigment metabolic process involved in developmental pigmentation + 1
        positive regulation of developmental pigmentation + 8
        regulation of developmental pigmentation + 13
        sex-specific pigmentation + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.