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ONTOLOGY REPORT - ANNOTATIONS


Term:Golgi vesicle budding
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Accession:GO:0048194 term browser browse the term
Definition:The evagination of the Golgi membrane, resulting in formation of a vesicle.
Synonyms:exact_synonym: Golgi-derived vesicle budding
 narrow_synonym: dictyosome vesicle budding


show annotations for term's descendants           Sort by:
 
Golgi vesicle budding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Golph3 golgi phosphoprotein 3 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:19837035)
Ensembl
UniProt
RGD
PMID:19837035, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 2:62,360,754...62,388,773
Ensembl chr 2:62,360,754...62,388,771
JBrowse link
G Golph3l golgi phosphoprotein 3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:197,720,259...197,749,060
Ensembl chr 2:197,715,761...197,750,115
JBrowse link
G Myo18a myosin XVIIIa ISO
IEA
(PMID:19837035)
GO_REF:0000107
RGD
Ensembl
PMID:19837035 GO_REF:0000107 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535
JBrowse link
G Prkci protein kinase C, iota IDA RGD PMID:12871960 RGD:724652 NCBI chr 2:115,941,998...116,002,550
Ensembl chr 2:115,941,993...116,002,561
JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap2 ADP-ribosylation factor GTPase activating protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:80,081,541...80,093,659
Ensembl chr 3:80,081,647...80,093,658
JBrowse link
G Arfgap3 ADP-ribosylation factor GTPase activating protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:124,149,665...124,198,298
Ensembl chr 7:124,149,751...124,198,200
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ISO (PMID:12047556), (PMID:17956946) RGD PMID:12047556, PMID:17956946 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 ISO
IBA
(PMID:18287528)
PMID:21873635
RGD PMID:18287528, PMID:21873635 RGD:13792537 NCBI chr17:9,560,735...9,565,249
Ensembl chr17:9,560,761...9,565,249
JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 ISO
ISS
(PMID:10052452)
GO_REF:0000024
RGD
UniProt
PMID:10052452 GO_REF:0000024 NCBI chr 6:109,169,739...109,205,004
Ensembl chr 6:109,169,741...109,205,004
JBrowse link
COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22358839)
Ensembl
UniProt
RGD
PMID:22358839 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:86,044,485...86,129,066
Ensembl chr 9:86,044,485...86,129,329
JBrowse link
G Klhl12 kelch-like family member 12 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:22358839), (PMID:27716508)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22358839, PMID:27716508, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr13:51,280,933...51,314,753
Ensembl chr13:51,282,684...51,314,797
JBrowse link
G Pdcd6 programmed cell death 6 ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:31,576,183...31,591,852
Ensembl chr 1:31,576,183...31,591,849
JBrowse link
G Pef1 penta-EF hand domain containing 1 ISO
IBA
ISS
(PMID:27716508)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:27716508, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:148,320,610...148,343,876
Ensembl chr 5:148,320,438...148,343,886
JBrowse link
G Preb prolactin regulatory element binding IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:26,784,088...26,787,875
Ensembl chr 6:26,784,088...26,787,874
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:3,856,218...3,890,785
Ensembl chr 3:3,856,218...3,890,758
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:75,153,074...75,216,941
Ensembl chr13:75,175,254...75,216,941
JBrowse link
G Tfg trafficking from ER to golgi regulator IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:46,180,189...46,206,723
Ensembl chr11:46,179,940...46,206,721
JBrowse link
COPII-coated vesicle budding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07041481.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:131,381,134...131,382,011 JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mia3 MIA SH3 domain ER export factor 3 ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Scap SREBF chaperone ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:118,551,869...118,628,650
Ensembl chr 8:118,570,503...118,628,651
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component ISO
IBA
UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
PMID:21873635
RGD PMID:8898360, PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 6:80,059,742...80,107,340
Ensembl chr 6:80,060,916...80,107,236
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,715,118...138,757,111
Ensembl chr 3:138,715,570...138,757,111
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17499046), (PMID:18843296)
Ensembl
RGD
PMID:17499046, PMID:18843296, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:MGI:5496780 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:4440619|MGI:MGI:4440621 (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 ISS
ISO
IEA
GO_REF:0000024
(PMID:24618899)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24618899 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Preb prolactin regulatory element binding IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,784,088...26,787,875
Ensembl chr 6:26,784,088...26,787,874
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,215,989...37,245,603
Ensembl chr10:37,215,937...37,245,658
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      vesicle-mediated transport 1673
        vesicle budding from membrane 70
          Golgi vesicle budding 37
            COPI-coated vesicle budding + 5
            COPII-coated vesicle budding + 28
            Golgi transport vesicle coating + 4
            Golgi vesicle bud deformation and release 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          organelle organization 4101
            vesicle organization 295
              vesicle budding from membrane 70
                Golgi vesicle budding 37
                  COPI-coated vesicle budding + 5
                  COPII-coated vesicle budding + 28
                  Golgi transport vesicle coating + 4
                  Golgi vesicle bud deformation and release 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.