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ONTOLOGY REPORT - ANNOTATIONS


Term:COPII vesicle coating
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Accession:GO:0048208 term browser browse the term
Definition:The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
Synonyms:exact_synonym: COPII coating of ER-derived vesicle;   COPII vesicle coat assembly;   COPII vesicle coat formation


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COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOR1 adiponectin receptor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:240,035...254,287
Ensembl chr 7:240,065...282,845
JBrowse link
G CUL3 cullin 3 IEA Ensembl GO_REF:0000107 NCBI chr25:37,730,903...37,819,851
Ensembl chr25:37,733,229...37,800,886
JBrowse link
G KLHL12 kelch like family member 12 ISO (PMID:22358839), (PMID:27716508) UniProtKB PMID:22358839, PMID:27716508 NCBI chr 7:256,814...284,132 JBrowse link
G PDCD6 programmed cell death 6 ISO (PMID:27716508) UniProtKB PMID:27716508 NCBI chr34:11,909,657...11,929,850
Ensembl chr34:11,909,934...11,929,855
JBrowse link
G PEF1 penta-EF-hand domain containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:69,465,773...69,482,465
Ensembl chr 2:69,479,516...69,482,331
JBrowse link
G PREB prolactin regulatory element binding ISO PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr17:21,116,427...21,120,250
Ensembl chr17:21,117,020...21,120,031
JBrowse link
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:49,027,190...49,060,858
Ensembl chr 9:49,031,669...49,060,848
JBrowse link
G SEC16B SEC16 homolog B, endoplasmic reticulum export factor IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:21,683,310...21,739,914
Ensembl chr 7:21,698,411...21,738,954
JBrowse link
G TFG trafficking from ER to golgi regulator IEA InterPro GO_REF:0000002 NCBI chr33:7,240,912...7,265,526
Ensembl chr33:7,236,613...7,265,309
JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPK15 mitogen-activated protein kinase 15 IEA Ensembl GO_REF:0000107 NCBI chr13:37,317,061...37,322,792
Ensembl chr13:37,316,424...37,322,792
JBrowse link
G PREB prolactin regulatory element binding IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:21,116,427...21,120,250
Ensembl chr17:21,117,020...21,120,031
JBrowse link
G SAR1B secretion associated Ras related GTPase 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:22,713,459...22,743,190
Ensembl chr11:22,717,942...22,743,124
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    cellular process 15440
      vesicle targeting 40
        vesicle targeting, to, from or within Golgi 21
          vesicle targeting, rough ER to cis-Golgi 11
            COPII vesicle coating 11
              regulation of COPII vesicle coating 3
Path 2
Term Annotations click to browse term
  biological_process 16162
    cellular process 15440
      cellular localization 2784
        organelle localization 552
          vesicle localization 177
            establishment of vesicle localization 157
              vesicle targeting 40
                vesicle targeting, to, from or within Golgi 21
                  vesicle targeting, rough ER to cis-Golgi 11
                    COPII vesicle coating 11
                      regulation of COPII vesicle coating 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.